NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F077431

Metagenome Family F077431

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077431
Family Type Metagenome
Number of Sequences 117
Average Sequence Length 110 residues
Representative Sequence RMLPAPGLQLPHRIEPRYRRAFEDGLMLAVRGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL
Number of Associated Samples 98
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.71 %
% of genes near scaffold ends (potentially truncated) 96.58 %
% of genes from short scaffolds (< 2000 bps) 98.29 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (64.103 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(18.803 % of family members)
Environment Ontology (ENVO) Unclassified
(44.444 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.991 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 23.19%    β-sheet: 15.94%    Coil/Unstructured: 60.87%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF01865PhoU_div 70.94
PF01384PHO4 5.13

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG1392Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 familyInorganic ion transport and metabolism [P] 70.94
COG0306Phosphate/sulfate permeaseInorganic ion transport and metabolism [P] 5.13


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms64.10 %
UnclassifiedrootN/A35.90 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_100545605Not Available540Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100546813All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300000891|JGI10214J12806_10426426All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300000955|JGI1027J12803_102070876All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300002568|C688J35102_119988720All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300004114|Ga0062593_100421328All Organisms → cellular organisms → Bacteria → Proteobacteria1203Open in IMG/M
3300004463|Ga0063356_101205574All Organisms → cellular organisms → Bacteria → Proteobacteria1100Open in IMG/M
3300005093|Ga0062594_103348268Not Available504Open in IMG/M
3300005175|Ga0066673_10829806Not Available528Open in IMG/M
3300005331|Ga0070670_100756670All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300005334|Ga0068869_101613517Not Available578Open in IMG/M
3300005335|Ga0070666_10680411All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300005337|Ga0070682_100482275All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300005337|Ga0070682_101654681All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium555Open in IMG/M
3300005338|Ga0068868_100199218All Organisms → cellular organisms → Bacteria → Proteobacteria1669Open in IMG/M
3300005338|Ga0068868_102016431Not Available548Open in IMG/M
3300005339|Ga0070660_100942182All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium729Open in IMG/M
3300005353|Ga0070669_101702576Not Available550Open in IMG/M
3300005406|Ga0070703_10394782Not Available601Open in IMG/M
3300005440|Ga0070705_101571910Not Available553Open in IMG/M
3300005444|Ga0070694_100242538All Organisms → cellular organisms → Bacteria → Proteobacteria1360Open in IMG/M
3300005535|Ga0070684_102205964All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300005543|Ga0070672_101314217All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium646Open in IMG/M
3300005544|Ga0070686_101853583Not Available514Open in IMG/M
3300005545|Ga0070695_101707584Not Available527Open in IMG/M
3300005564|Ga0070664_102085611Not Available538Open in IMG/M
3300005615|Ga0070702_100816050Not Available723Open in IMG/M
3300005618|Ga0068864_100819250All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300005618|Ga0068864_102321825Not Available543Open in IMG/M
3300005840|Ga0068870_10669793All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300005844|Ga0068862_101706935Not Available638Open in IMG/M
3300006028|Ga0070717_10369589All Organisms → cellular organisms → Bacteria1285Open in IMG/M
3300006046|Ga0066652_102088350Not Available502Open in IMG/M
3300006237|Ga0097621_100348386All Organisms → cellular organisms → Bacteria1317Open in IMG/M
3300006358|Ga0068871_101352406Not Available671Open in IMG/M
3300006844|Ga0075428_102516501Not Available527Open in IMG/M
3300009098|Ga0105245_10794483All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300009100|Ga0075418_12318763All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300009148|Ga0105243_12204356Not Available588Open in IMG/M
3300009177|Ga0105248_11113109All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300009177|Ga0105248_13378739Not Available507Open in IMG/M
3300009551|Ga0105238_10387142All Organisms → cellular organisms → Bacteria → Proteobacteria1390Open in IMG/M
3300010337|Ga0134062_10788063All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300010366|Ga0126379_12312884All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300010403|Ga0134123_12009157All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium637Open in IMG/M
3300011422|Ga0137425_1014281All Organisms → cellular organisms → Bacteria → Proteobacteria1626Open in IMG/M
3300012041|Ga0137430_1037059All Organisms → cellular organisms → Bacteria → Proteobacteria1299Open in IMG/M
3300012227|Ga0137449_1076711Not Available712Open in IMG/M
3300012892|Ga0157294_10138730All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300012907|Ga0157283_10197770All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300012910|Ga0157308_10260394Not Available617Open in IMG/M
3300012912|Ga0157306_10193464Not Available678Open in IMG/M
3300012912|Ga0157306_10234708All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300012916|Ga0157310_10063217All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300012916|Ga0157310_10384305All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300012955|Ga0164298_11224512Not Available570Open in IMG/M
3300012985|Ga0164308_11028864All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300012987|Ga0164307_10799747All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300012987|Ga0164307_10880953All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300012987|Ga0164307_11779327Not Available522Open in IMG/M
3300012988|Ga0164306_11747453All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300012989|Ga0164305_11445832Not Available607Open in IMG/M
3300012989|Ga0164305_12102268Not Available517Open in IMG/M
3300013102|Ga0157371_10820979Not Available702Open in IMG/M
3300013297|Ga0157378_11916948Not Available642Open in IMG/M
3300014318|Ga0075351_1087771All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium650Open in IMG/M
3300014318|Ga0075351_1107695All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300014325|Ga0163163_13172608Not Available513Open in IMG/M
3300014326|Ga0157380_10783605All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300014326|Ga0157380_11039812All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300014969|Ga0157376_10465900All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300015200|Ga0173480_10234629All Organisms → cellular organisms → Bacteria991Open in IMG/M
3300015201|Ga0173478_10414592Not Available649Open in IMG/M
3300015372|Ga0132256_102072027All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300015373|Ga0132257_103515638Not Available570Open in IMG/M
3300015374|Ga0132255_102208336All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300015374|Ga0132255_104323046All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300015374|Ga0132255_105430944Not Available539Open in IMG/M
3300015374|Ga0132255_106212399All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300018073|Ga0184624_10192625All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300019362|Ga0173479_10841719Not Available512Open in IMG/M
3300023077|Ga0247802_1040235All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300024055|Ga0247794_10106187All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300024186|Ga0247688_1055886Not Available640Open in IMG/M
3300024317|Ga0247660_1018054All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300025899|Ga0207642_10140824All Organisms → cellular organisms → Bacteria → Proteobacteria1272Open in IMG/M
3300025903|Ga0207680_10092875All Organisms → cellular organisms → Bacteria → Proteobacteria1923Open in IMG/M
3300025912|Ga0207707_10520958All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300025919|Ga0207657_10748288All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium757Open in IMG/M
3300025925|Ga0207650_11612469Not Available551Open in IMG/M
3300025936|Ga0207670_10022375All Organisms → cellular organisms → Bacteria3917Open in IMG/M
3300025936|Ga0207670_11474918All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300025940|Ga0207691_11370208Not Available582Open in IMG/M
3300025941|Ga0207711_11122983All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300025942|Ga0207689_11026584All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300025960|Ga0207651_10769061All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300025960|Ga0207651_11033492All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300025960|Ga0207651_11400274Not Available629Open in IMG/M
3300026095|Ga0207676_12614999Not Available501Open in IMG/M
3300027717|Ga0209998_10023124All Organisms → cellular organisms → Bacteria → Proteobacteria1343Open in IMG/M
3300027876|Ga0209974_10164602All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300028381|Ga0268264_11853848All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300031538|Ga0310888_10129215All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300031716|Ga0310813_11516327All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium624Open in IMG/M
3300031858|Ga0310892_10011161All Organisms → cellular organisms → Bacteria3674Open in IMG/M
3300031913|Ga0310891_10188047All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300031938|Ga0308175_102308455All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium603Open in IMG/M
3300032025|Ga0318507_10501415Not Available528Open in IMG/M
3300032075|Ga0310890_11305885All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300032122|Ga0310895_10143992All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300032179|Ga0310889_10733872Not Available517Open in IMG/M
3300032211|Ga0310896_10903970Not Available511Open in IMG/M
3300032421|Ga0310812_10054656All Organisms → cellular organisms → Bacteria → Proteobacteria1548Open in IMG/M
3300033412|Ga0310810_10344203All Organisms → cellular organisms → Bacteria → Proteobacteria1573Open in IMG/M
3300033412|Ga0310810_10595352All Organisms → cellular organisms → Bacteria → Proteobacteria1064Open in IMG/M
3300033550|Ga0247829_11749414All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300034818|Ga0373950_0161423Not Available518Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.84%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.13%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.27%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.27%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.42%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.56%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.56%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.71%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.71%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.71%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.71%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.85%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.85%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300012041Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2EnvironmentalOpen in IMG/M
3300012227Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2EnvironmentalOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014318Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rdEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300023077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300024186Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29EnvironmentalOpen in IMG/M
3300024317Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10054560523300000364SoilGMLPVPGLELPNRMEKRYRRAFEDGLMVAVRGEILKEDLLTNQPTLGDPTRATTRVISGTAGANYWRGAFARISINYVLNMWSGTSETIKALHAQSLLEHELLLRFAISL*
INPhiseqgaiiFebDRAFT_10054681313300000364SoilDQMLPAPGLELPNRTEGRYTRAFEDGLMVAFRGEFVKEDLVNTQTELADPTRATTRVISGTAGVNYWRGHFARISINYVLNMWSGTSETIKTLRAEGSLEHEVLLRFASSL*
JGI10214J12806_1042642623300000891SoilRAFEDGLMLALRGEFVKEDLVNTATELADPTRATTRVVSGTVGVNYWRGSFARISINYVANMWSGTSETIKTLRAQGLLEHELLLRFAMAL*
JGI1027J12803_10207087623300000955SoilPGLELPNRTEGRYTRAFEDGLMVAFRGEFVKEDLVNTQTELADPTRATTRVISGTAGVNYWRGHFARISINYVLNMWSGTSETIKTLRAEGSLEHEVLLRFASSL*
C688J35102_11998872023300002568SoilLTVMGTPQLTAVSAYGEMWLWLAGDDHMLPAPGLQLPNRTDGRYKRAFEDGLMLALRGEFVKEDLINTQTALADPTRATTRVVSGTAGVNYWRGHFARISFNYVLNMWSGTAETIKTLRADGSLEHEVLLRFACSL*
Ga0062593_10042132833300004114SoilYRRAFEDGLMLALRGEFVKEDLVNTATELADPTRATTRVVSGTVGVNYWRGSFARISINYVANMWSGTSETIKTLRAQGLLEHELLLRFAIAL*
Ga0063356_10120557433300004463Arabidopsis Thaliana RhizosphereEDGLQLAIRGEILKEDLLSDQPTLGNPTRATTRVISGTAGVNYWRGSFARISINYVVNMWSGTSETIKALRAQGMLEHEVLVRFAAAL*
Ga0062594_10334826813300005093SoilRGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0066673_1082980613300005175SoilELWLWLAGDERMLPVPGLQLPSRIDRRYRRAFEDGLQLALRGEYVQDDLTTSNAILGDPTRATTRVISGVVGANYWRGSLARISINYVVNMWSGTSETIKVLRAESLLEHELMLRFAISL
Ga0070670_10075667023300005331Switchgrass RhizosphereEFIKEDLFSNVPSLGDPTRATTRVISGTAGANYWRGSFARISVNYVVNMWSGTSETIKALAAQSLLEHELLLRFATSL*
Ga0068869_10161351723300005334Miscanthus RhizosphereLAAYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAVRGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0070666_1068041113300005335Switchgrass RhizosphereELPNRTDERYKRAFEDGLMLAFRGEFVKEDLVNTQAELADPTRATTRVISGTAGVNYWRGHFARISINYVLNMWSGTSETIKTLRAQGTFEHEVLLRFAASL*
Ga0070682_10048227513300005337Corn RhizospherePGLQLPHRIEGHTYRRAFEDGLMLALRGEFVKEDLVNTLTSLADPTRATTRVVSGTAGVNYWRGHFARISINYVLNMWSGTSETIKTLRAQGQFEHELLLRFASSL*
Ga0070682_10165468113300005337Corn RhizosphereMVAVRGEFLKEDLINTATALADPTRATTRVVTGTAGVNYWRGHFARISINYVLNMWSGTSETIKTLRAQGTFEHEVLLRFAASL*
Ga0068868_10019921833300005338Miscanthus RhizospherePRLTALAAYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAVRGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0068868_10201643123300005338Miscanthus RhizosphereTGYGEVWLWLAGDDQMLPAPGLQLANRIEGHYRRAFEDGLMLAFRGEFTKEDVVNTATELADPTRATTRVVSGTAGVNYWRGRFARISINYVLNMWSGTSETVKTLRAQGAFEHEVLLRFASSL*
Ga0070660_10094218213300005339Corn RhizosphereAETETLNEQVSELGEPRLTALAAYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAVRGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0070669_10170257623300005353Switchgrass RhizosphereWLAGDDRMLPVPGLQLPARIDRRYRRAFEDGLMVAVRGEFLKEDLISNQPTLGNPTRATTRVISGTAGVNYWRGSLARISLNYVVNMWSGTSETVKALKAQSLLEHELLLRFQIAL*
Ga0070703_1039478213300005406Corn, Switchgrass And Miscanthus RhizosphereRGVAVAGRRRAHAAGAGLQLPHRIEPRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0070705_10157191023300005440Corn, Switchgrass And Miscanthus RhizosphereISELGAPRLTALAGYGEIYVWLAGDERMLPAPGLQLPNRVAPRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0070694_10024253833300005444Corn, Switchgrass And Miscanthus RhizosphereRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0070684_10220596413300005535Corn RhizosphereALRGEFIKEDLTTSQPTLGDPTRATTRVISGTAGANYWRGAFARISLNYVVNLWSGTSETIKALHAQEVLEHELLVRFAISL*
Ga0070672_10131421713300005543Miscanthus RhizosphereWLWLAGDDRMLPVPGLQLPHRIEGHYKRAFEDGLMLAVRGEFVKEDLVNTLTSLADPTRATTRVVSGTAGVNYWRGHFARISLNYVLNMWSGTSETIKTLAAQGQFEHEVLLRFASSL*
Ga0070686_10185358313300005544Switchgrass RhizosphereHYKRAFEDGLMLAVRGEFVKEDLVNTLTSLADPTRATTRVVSGTAGVNYWRGHFARISLNYVLNMWSGTSETIKTLAAQGQFEHEVLLRFASSL*
Ga0070695_10170758423300005545Corn, Switchgrass And Miscanthus RhizospherePHRIEPRYRRAFEDGLMLAVRGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0070664_10208561113300005564Corn RhizosphereLSAIAAYGELWLWLGGDDGMLPAPGLQLPARVEGRYRRAFEDGLMLALRGEFVKEDLVNTATELADPTRATTRVVSGTVGVNYWRGSFARISINYVANMWSGTSETIKTLRAQGLLEHELLLRFAMAL*
Ga0070702_10081605013300005615Corn, Switchgrass And Miscanthus RhizosphereLAEVDPAATPVVAIGKATLTGLAAYGEMWFWLAGDERMLPAPGLELPLRTEGRYRRAFEDGLMLAVRGEFIKEDLVSDQPTLGDPTRATSRVISGTAGVNYWRGAFARISLNYVINMWSGTSETIKALRGQSQFEHELLLRFAMSL*
Ga0068864_10081925023300005618Switchgrass RhizosphereRRAFEDGLMLALRAEFIKEDLFSNVPSLGDPTRATTRVISGTAGANYWRGSFARISVNYVVNMWSGTSETIKALAAQSLLEHELLLRFATSL*
Ga0068864_10232182513300005618Switchgrass RhizosphereAGDERMLPAPGLQLPNRVAPRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0068870_1066979313300005840Miscanthus RhizosphereEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0068862_10170693523300005844Switchgrass RhizosphereLAEADVTLADAPAAVLGTATLDGIAAYGELWLWLAGDDRMLPVPGLQLPARIDRRYRRAFEDGLMLAVRGEFLKEDLISNQPTLGNPTRATTRVVSGTAGVNYWRGSLARISLNYVVNMWSGTSETIKALKAQSLLEHELLLRFQISL*
Ga0070717_1036958913300006028Corn, Switchgrass And Miscanthus RhizosphereTEVPIGNEPVTVDGSATLTGIGAYGEMWLWLAGDERMLPVPGLELPARVDKLYRRAFDDGLMLALRGEFIKEDIVTNQPTLGDPSRATTRVVSGTAGVNYWRGALARISINYVVNMWSGTSETIKALRAESLLEHELLLRFAISL*
Ga0066652_10208835013300006046SoilPLRTEGRYRRAFEDGLMLAVRGEFIKEDLVSDQPTLGDPTRATSRVISGTAGVNYWRGAFARISLNYVINMWSGTSETIKALRGQSQFEHELLLRFAMSL*
Ga0097621_10034838633300006237Miscanthus RhizosphereLPNRVAPRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0068871_10135240623300006358Miscanthus RhizosphereALAGYGEIYVWLAGDERMLPAPGLQLPNRVAPRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0075428_10251650123300006844Populus RhizosphereDERMLPAPGLQLPSRITGRYRRAFEDGLMLAVRGEFIKEDLISNQPTLGDPTRATTRVVSGTAGVNYWRGALARISLNYVANLWSGSSETIKALRAQSMLEHELLLRFAISL*
Ga0105245_1079448323300009098Miscanthus RhizosphereETETLNEQVSELGAPRLTALAAYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0075418_1231876313300009100Populus RhizospherePVPGLQLPARIDRRYRRAFEDGLMVAVRGEFLKEDLISNQPTLGNPTRATTRVISGTAGVNYWRGSLARISLNYVVNMWSGTSETIKALKAQSLLEHELLLRFQISL*
Ga0105243_1220435613300009148Miscanthus RhizosphereGTATLDGISAYGELWLWLAGDDRMLPVPGLQLPARIDRRYRRAFEDGLMLAVRGEFLKEDLISNQPTLGNPTRATTRVISGTAGVNYWRGSLARISLNYVVNVWSGTSETVKALKAQSLLEHELLLRFQISL*
Ga0105248_1111310913300009177Switchgrass RhizosphereLAGDERMLPAPGLQLPNRVAPRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0105248_1337873923300009177Switchgrass RhizosphereVSPDALPRPVPGLQLPYRTDKRYRRAFDDGLQLALRGEYVQVDLTTNQPTLGDPTRATTRVISGTAGANYWRGALARISLNYVVNMWSGTSETIKALRAQSLLEHELLVRFAISL*
Ga0105238_1038714233300009551Corn RhizosphereVFRQQQLAETELVVGNEPVDIRGRATLTARAAYGELWFWLAGDERMLPVPGLELPNRTGKSYRRAFDDSLMLAVRGEYVQDDLTTNAPTLGDPTRATTRVVSGVAGANYWRGPFARISINYIINLWSGTSETIKALRAQELLEHELLVRFAISL*
Ga0134062_1078806313300010337Grasslands SoilMLALRGEFIKEDVTTNQPVLGDPSRATSRVVSGTAGANYWRGSLARISINYVLNMWSGTSETIKALRAQSTFEHELLLRFAISL*
Ga0126379_1231288413300010366Tropical Forest SoilLPSRVDRRYRRAFEDGLQLALRGEYVQDDVTTNNAMLGDPARATTRVISGVVGANYWRGSLARISINYVVNVWSGTSETVNALHAESQFEHELMLRFAISL*
Ga0134123_1200915723300010403Terrestrial SoilELPLRTEGRYRRAFEDGLMLAVRGEFIKEDLVSDQPTLGDPTRATSRVISGTAGVNYWRGAFARISLNYVINMWSGTSETIKALRGQSQFEHELLLRFAMSL*
Ga0137425_101428113300011422SoilLAVRGEFLKEDLISNQPTLGNPTRATTRVLSGTAGVNYWRGSLARISLNYVVNMWSGTSETIKALRAQSLLEHELLLRFQISL*
Ga0137430_103705933300012041SoilGLQLPARIDRRYRRAFEDGLMVAVRGEFLKEDLVSNQPTLGNPTRATTRVISGTAGVNYWRGGFARISLNYVVNMWSGTSETVKALRAQSLLEHELLLRFQISL*
Ga0137449_107671123300012227SoilLWLWLAGDDRMLPVPGLQLPARIDRRYRRAFEDGLMVAVRGEFMKEDLISNQPTLGNPTRATTRVVSGTAGVNYWRGAAARISLNYVVNMWSGTSETIKALKAQSLLEHELLLRFQISL*
Ga0157294_1013873023300012892SoilGLMLALRGEILKEDLTNDQPTLGNPTRATTRVVSGTAGVNYWRGSFARMSINYVLNYWSGTSETIKALAAQGMLEHELLLRFATAL*
Ga0157283_1019777013300012907SoilLMLAVRGEFLKEDLISNQPTLGNPTRATTRVVSGTAGVNYWRGSLARISLNYVVNMWSGTSETVKALKAQSLLEHELLLRFATSL*
Ga0157308_1026039413300012910SoilTALAGYGEIYVWLAGDERMLPAPGLQLPNRVAPRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFAIAL*
Ga0157306_1019346413300012912SoilKEDLTNDQPTLGNPTRATTRVVSGTAGVNYWLGSFARMSINYVLNYWSGTSETIKALAAQGMLEHELLLRFATAL*
Ga0157306_1023470813300012912SoilGLMLAVRGELAKEDLVNTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0157310_1006321723300012916SoilEMWFWVAGDERMLPMPGLQLPHRLDRRYRRAFEDGLMLALRGEILKEDLTNDQPTLGNPTRATTRVVSGTAGVNYWRGSFARMSINYVLNYWSGTSETIKALAAQGMLEHELLLRFATAL
Ga0157310_1038430523300012916SoilEDLVNTATELADPTRATTRVVSGTVGVNYWRGSFARISINYVANMWSGTSETIKTLRAQGLLEHELLLRFAMAL*
Ga0164298_1122451213300012955SoilDDGMLPSPRLHLPARVEGRYRRAFEDGLMLALRGEFVKEDLVNTRTDLADPTRATTRVVSGTAGVNYWRGSFARISINYVANMWSGTSETIKTLRAQSTLEHELLLRFAIAL*
Ga0164308_1102886413300012985SoilMLALRGEFVKEDLVNTRTDLADPTRATTRVVSGTAGVNYWRGSFARISINYVANMWSGTSETIKTLRAQSTLEHELLLRFAIAL*
Ga0164307_1079974723300012987SoilEDLTTSQPTLGDPTRATTRVISGTAGANYWRGSFARISINYIINLWSGTSETIKALRAQELLEHELLVRFAISL*
Ga0164307_1088095323300012987SoilLWLWLGGDDGMLPSPGLQLPARVEGRYRRAFEDGLMLALRGEFVKEDLVNTRTDLADPTRATTRVVSGTAGVNYWRGSFARISINYVANMWSGTSETIKTLRAQSTLEHELLLRFAIAL*
Ga0164307_1177932723300012987SoilPAPGPELPNRTEGRYTRAFEDGLMVAFRGEFVKEDLVNTQTELADPTRATTRVISGTAGVNYWRGHFARISINYVLNSWSGTSETIKTLRAQGAFEHEVLLRFAASL*
Ga0164306_1174745313300012988SoilGRYRRAFEDGLMLALRGEFVKEDLVNTRTDLADPTRATTRVVSGTAGVNYWRGSFARISINYVANMWSGTSETIKTLRAQSTLEHELLLRFAIAL*
Ga0164305_1144583223300012989SoilAESEVVTGTTPVSVAGNATLTGIGGYGEMWFWLSGDERMLPAPGLQLPSRTDKRYRRAFDDGLMLALRGEFIKEDLTTGAPTLGDPTRATTRVISGTAGANYWRGAFARISINYIINLWSGTSETIKALRAQELLEHELLVRFAISL*
Ga0164305_1210226813300012989SoilAETDAPPLTGPLVALATPQLTAMAAYGELWLWLARDDGMLPSPGLQLPARVEGRYRRAFEDGLMLALRGEFVKEDLVNTRTDLADPTRATTRVVSGTAGVNYWRGSFARISINYVANMWSGTSETIKTLRAQSTLEHELLLRFAIAL*
Ga0157371_1082097923300013102Corn RhizosphereGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0157378_1191694813300013297Miscanthus RhizosphereTEKLDEQISELGAPRLTALAGYGEIYVWLAGDERMLPAPGLQLPNRVAPRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARSSMNYSVNMWSGTAETIKALRAQSMLEHELLLRFATSL*
Ga0075351_108777123300014318Natural And Restored WetlandsEDGLMLAVRGEIIKEDLVSDQPTLGDPTRATTRVISGTAGANYWRGSFARISLNYVINMWSGTSETVKALRAQGQFEHELLLRFAVSL*
Ga0075351_110769513300014318Natural And Restored WetlandsRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0163163_1317260823300014325Switchgrass RhizosphereLGSARLEGLSGYGEMWLWVAGDERMLPAPGFELPNRIDRRYRRAFEDGLMLALRAEFIKEDLFSNVPSLGDPTRATTRVISGTAGANYWRGSFARISVNYVVNMWSGTSETIKALAAQSLLEHELLLRFATSL*
Ga0157380_1078360523300014326Switchgrass RhizosphereRDGGKLADGIMLAVRGEFLKEDLTSDVPTLGNPTRATTRVVSGTVGVNYWRGALVRVSVNYILNNWSGTSETAKTLKAQGAFEHELMLRFAMSL*
Ga0157380_1103981213300014326Switchgrass RhizospherePHRIEPRYRRAFEDGLMLAVRGELAKEDLVNTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL*
Ga0157376_1046590013300014969Miscanthus RhizosphereTLTGIAAYGEMWFWLAGDERMLPVPGLQLPARVEKRYRRAFDDGLMLALRGEFIKEDLTTSQPTLGDPTRATTRVVSGTAGANYWRGAFARISINYVVNMWSGTSETIKALRAQSLLEHELLLRFAISL*
Ga0173480_1023462913300015200SoilRAFEDGLMLALRGEILKEDLTNDQPTLGNPTRATTRVVSGTAGVNYWRGSFARMSINYVLNYWSGTSETIKALAAQGMLEHELLLRFATAL*
Ga0173478_1041459223300015201SoilSRPDDDRFQWLKIAVTPLGAATLKGFAAYGEMWFWVAGDERMLPMPGLQLPHRLDRRYRRAFEDGLMLALRGEILKEDLTNDQPTLGNPTRATTRVVSGTAGVNYWRGAFARISINYVVNYWSGTSETIKALAAQGALEHELLLRFATSL*
Ga0132256_10207202723300015372Arabidopsis RhizosphereWFWLAGDDRMLPAPGLELPLRTEGRYRRAFEDGLMLAVRGEFTKEDLVSDQPTLGDPTRATSRVIAGTAGVNYWRGSFARISMNYVINMWSGTSETIKALRGQSQFEHELLLRFAMCL*
Ga0132257_10351563823300015373Arabidopsis RhizosphereGDDQMLPAPGLELPNRTEGRYTRAFEDGLMVAFRGEFVKEDLVNTQAELADPTRATTRVISGTAGVNYWRGHFARISINYMLNMWSGTSETIKTLRAQGLLEHEVLLRFASSL*
Ga0132255_10220833623300015374Arabidopsis RhizosphereWLAGDGGMLPAPGLQLPARVEGRYRRAFEDGLMLALRGEFIKEDVTTNQPTLGDPSRATTRVVSGTAGANYWRGSFARISINYVLNMWSGTSETIKALRAQSAFEHELLLRFAISL*
Ga0132255_10432304613300015374Arabidopsis RhizosphereFIKEDLTSNQPTLADPTRATTRVVSGTAGANYWRGRFARFSINYVINMWSGTSETIKALRAQNTLEHELLVRFAVSL*
Ga0132255_10543094413300015374Arabidopsis RhizosphereTVPLSDRPSLSLMLAVRGEFTKEDLVSDQPTLGDPTRATSRVIAGTAGVNYWRGSFARISMNYVINMWSGTSETIKALRGQSQFEHELLLRFAMCL*
Ga0132255_10621239913300015374Arabidopsis RhizosphereALRGEILKEDLTNDQPTLGNPTRATTRVVSGTAGVNYWRGSVARISINYIVNYWSGTSETIKTLAAQGALEHELLLRFATSL*
Ga0184624_1019262513300018073Groundwater SedimentVGGAPKLGDGVMLAVRGEFLKEDLTSDVPTLGNPTRATTRVVSGTVGLNYWRGALVRASVNYILNNWSGTSETVKTLKAQGAFEHELMLRFAMSL
Ga0173479_1084171913300019362SoilLSTQTHPSENLTQEPAVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0247802_104023523300023077SoilETDAPPLTGPLVPLATPQLTAMAAYGELWLWLAGDDGMLPAPGLQLPARVEGRYRRAFEDGLMLALRGEFVKEDLVNTATELADPTRATTRVVSGTVGVNYWRGSFARISINYVANMWSGTSETIKTLRAQGLLEHELLLRFAMAL
Ga0247794_1010618713300024055SoilYVWLAGDERMLPAPGLQLPNRVAPRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0247688_105588613300024186SoilTTTVNGPVTALGTPQLNALAAYGELWLWLAGDERMLPAPGLQLPARIDGRYRRAFEDGLMFAVRGEMVKEDLIDTQAALADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAESLLEHELLLRFAAAL
Ga0247660_101805423300024317SoilGTPQLNALAAYGELWLWLAGDERMLPAPGLQLPARIDGRYRRAFEDGLMFAVRGEMVKEDLIDTQAALADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAESLLEHELLLRFAAAL
Ga0207642_1014082413300025899Miscanthus RhizosphereETLNEQVSELGAPRLTALAAYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0207680_1009287533300025903Switchgrass RhizosphereLAETETLNEQVSELGEPRLTALAAYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0207707_1052095813300025912Corn RhizosphereNATLTGISGYGEMWFWLAGDERMLPAPGLQLPARTDKRYRRAFDDGLMLALRGEFIKEDLTTSQPTLGDPTRATTRVISGTAGANYWRGAFARISLNYVVNLWSGTSETIKALHAQEVLEHELLVRFAISL
Ga0207657_1074828813300025919Corn RhizosphereAETETLNEQVSELGEPRLTALAAYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0207650_1161246923300025925Switchgrass RhizosphereGAPRLTALAGYGEIYVWLAGDERMLPAPGLQLPNRVAPRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0207670_1002237513300025936Switchgrass RhizosphereRMLPAPGLQLPHRIEPRYRRAFEDGLMLAVRGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0207670_1147491823300025936Switchgrass RhizosphereIDRRYRRAFEDGLMVAVRGEFLKEDLISNQPTLGNPTRATTRVVSGTAGVNYWRGAAARISLNYVVNMWSGTSETIKALKAQSLLEHELLLRFQISL
Ga0207691_1137020823300025940Miscanthus RhizosphereWLWLAGDDRMLPVPGLQLPHRIEGHYKRAFEDGLMLAVRGEFVKEDLVNTLTSLADPTRATTRVVSGTAGVNYWRGHFARISLNYVLNMWSGTSETIKTLAAQGQFEHEVLLRFASSL
Ga0207711_1112298313300025941Switchgrass RhizosphereFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0207689_1102658423300025942Miscanthus RhizosphereQVSELGAPRLTALAAYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAVRGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYVLNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0207651_1076906123300025960Switchgrass RhizosphereVDGVMLAVRGEFLKEDLTSDVATLGNPTRATTRVVSGTVGVNYWRGALVRVSVNYILNNWSGTSETAKTLKAQGAFEHELMLRFAMSL
Ga0207651_1103349213300025960Switchgrass RhizosphereGEFLKEDLISNQPTLGNPTRATTRVISGTAGVNYWRGSLARISLNYVVNMWSGTSETIKALKAQSLLEHELLLRFQISL
Ga0207651_1140027423300025960Switchgrass RhizosphereFWLAGDERMLPAPGLELPLRTEGRYRRAFEDGLMLAVRGEFIKEDLVSDQPTLGDPTRATSRVISGTAGVNYWRGAFARISLNYVINMWSGTSETIKALRGQSQFEHELLLRFAMSL
Ga0207676_1261499913300026095Switchgrass RhizosphereRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0209998_1002312413300027717Arabidopsis Thaliana RhizosphereQVSELGAPRLTALAAYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAVRGELVKEDLVNTNSTLANPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0209974_1016460213300027876Arabidopsis Thaliana RhizosphereGLMLAVRGELAKEDLVNTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0268264_1185384823300028381Switchgrass RhizosphereLPNLVAPRYRRAFEDGLMLAVRGEMVKEDLVNTESSLADPTRATTRVISGTAGVNYWRGSFARISMNYIVNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0310888_1012921533300031538SoilGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0310813_1151632723300031716SoilERMLPVPGLQLPYRTDKRYRRAFDDGLQLALRGEYVQVDLTTNQPTLGDPTRATTRVISGTAGANYWRGALARISLNYVVNMWSGTSETIKALRAQSLLEHELLVRFAISL
Ga0310892_1001116153300031858SoilPGLQLPHRIEPRYRRAFEDGLMLAVRGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0310891_1018804723300031913SoilDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0308175_10230845513300031938SoilRIDKRYRRAFDDGLMLALRGEYVQEDLTTSQPTLGDPTRATTRVVSGAVGANYWRGSLARISINYVVNMWSGTSETIKALRAESQLVHELMVRFAISL
Ga0318507_1050141513300032025SoilVLKEDLTSNAAYLGDPNRATTRVISGTLGLNYWRGSLVRLSINYVANYWSGTSENIKILQAMGALEHELLLRFAMCL
Ga0310890_1130588523300032075SoilRMLPAPGLQLPHRIEPRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0310895_1014399223300032122SoilAEADVTLADAPAAVLGTATLDGISAYGELWLWLAGDDRMLPVPGLQLPARIDRRYRRAFEDGLMLAVRGEFLKEDLISNQPTLGNPTRATTRVISGTAGVNYWRGSLARISLNYVVNMWSGTSETVKALKAQSLLEHELLLRFQISL
Ga0310889_1073387223300032179SoilYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0310896_1090397013300032211SoilKLQDVSETETLIVQVSELGEPRLTALAAYGEVWLWLAGDERMLPAPGLQLPHRIEPRYRRAFEDGLMLAARGELAKEDLVDTNSTLADPTRATTRVISGTAGVNYWRGSFARISINYILNMWSGTSETIKALRAQSMLEHELLLRFATSL
Ga0310812_1005465633300032421SoilMLALRGEFVKEDLVNTLTSLADPTRATTRVVSGTAGVNYWRGHFARISINYVLNMWSGTSETIKALRAESLLEHELLLRFAAAL
Ga0310810_1034420313300033412SoilGRYRRAFEDGLMLALRGEFVKEDLVNTATELADPTRATTRVVSGTVGVNYWRGSFARISINYVANMWSGTSETIKTLRAQGLLEHELLLRFAMAL
Ga0310810_1059535233300033412SoilYVQEDLSTNQATLGDPTRATTRVISGVAGANYWRGPFARISLNYVLNMWSGTSETIKALRAESLLEHELMVRFAISL
Ga0247829_1174941423300033550SoilILKEDLLSDQPTLGNPSRATTRVISGTAGVNYWRGSFARISINYVVNMWSGTSETIKALRAQGMLEHELLLRFATAL
Ga0373950_0161423_19_4293300034818Rhizosphere SoilVNVRGSATLTGIAAYGEMWFWLAGDERMLPVPGLQLPARVEKRYRRAFDDGLMLALRGEFIKEDLTTSQPTLGDPTRATTRVVSGTAGANYWRGAFARISINYVVNMWSGTSETIKALRAQSLLEHELLLRFAISL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.