Metagenome / Metatranscriptome Family F077409

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077409
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	132 residues
Representative Sequence	ASPERLRQASLELLEKAADEWGRPTSLSLAMNPVVPWSPATRIVKHAFEQDFTIVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRRVAGVWRLVAYRAVE
Number of Associated Samples	89
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.42 %
% of genes near scaffold ends (potentially truncated)	96.58 %
% of genes from short scaffolds (< 2000 bps)	97.44 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.265 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (11.966 % of family members)
Environment Ontology (ENVO)	Unclassified (37.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.265 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.21% β-sheet: 29.80% Coil/Unstructured: 50.99%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00498	FHA	5.98
PF00230	MIP	5.13
PF00982	Glyco_transf_20	1.71
PF10518	TAT_signal	1.71
PF07885	Ion_trans_2	1.71
PF01988	VIT1	0.85
PF14907	NTP_transf_5	0.85
PF13557	Phenol_MetA_deg	0.85
PF06826	Asp-Al_Ex	0.85
PF00593	TonB_dep_Rec	0.85
PF01569	PAP2	0.85
PF13450	NAD_binding_8	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	5.13
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	1.71
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.85
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.85
COG2985	Uncharacterized membrane protein YbjL, putative transporter	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
All Organisms	root	All Organisms	42.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
cellular organisms	root	All Organisms → cellular organisms	42.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.40 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	3.42 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	11.11 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	5.13 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.27 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.42 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	11.11 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	5.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.42 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	9.40 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	5.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.42 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	1.71 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	9.40 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	5.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.42 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	1.71 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	9.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	3.42 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.42 %
Solidesulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio	1.71 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.71 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Syntrophus gentianae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	9.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	3.42 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.42 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.71 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.71 %
Solidesulfovibrio alcoholivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	0.85 %
Solidesulfovibrio fructosivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio fructosivorans	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_43250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1805	Open in IMG/M
3300004025\|Ga0055433_10201214	Not Available	501	Open in IMG/M
3300004156\|Ga0062589_101425470	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	677	Open in IMG/M
3300004157\|Ga0062590_100640011	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300004157\|Ga0062590_102225247	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio fructosivorans	575	Open in IMG/M
3300004643\|Ga0062591_102570572	Not Available	536	Open in IMG/M
3300005093\|Ga0062594_101226371	Not Available	746	Open in IMG/M
3300005165\|Ga0066869_10040252	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300005293\|Ga0065715_10225187	Not Available	1254	Open in IMG/M
3300005333\|Ga0070677_10839531	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300005340\|Ga0070689_100715840	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	875	Open in IMG/M
3300005340\|Ga0070689_101585830	Not Available	594	Open in IMG/M
3300005347\|Ga0070668_101670466	Not Available	584	Open in IMG/M
3300005354\|Ga0070675_102024100	Not Available	531	Open in IMG/M
3300005355\|Ga0070671_100040332	All Organisms → cellular organisms → Bacteria	3877	Open in IMG/M
3300005364\|Ga0070673_101348767	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300005365\|Ga0070688_100326840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1116	Open in IMG/M
3300005365\|Ga0070688_101726921	Not Available	513	Open in IMG/M
3300005366\|Ga0070659_101177771	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005440\|Ga0070705_100886990	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	716	Open in IMG/M
3300005526\|Ga0073909_10311199	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005549\|Ga0070704_101333000	Not Available	657	Open in IMG/M
3300005577\|Ga0068857_102566130	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	500	Open in IMG/M
3300005713\|Ga0066905_101625621	Not Available	592	Open in IMG/M
3300005843\|Ga0068860_102652971	Not Available	520	Open in IMG/M
3300005844\|Ga0068862_101582424	Not Available	662	Open in IMG/M
3300006237\|Ga0097621_101914892	Not Available	566	Open in IMG/M
3300006358\|Ga0068871_101362551	Not Available	668	Open in IMG/M
3300006358\|Ga0068871_101584547	Not Available	620	Open in IMG/M
3300006358\|Ga0068871_101741551	Not Available	591	Open in IMG/M
3300006358\|Ga0068871_102360367	Not Available	507	Open in IMG/M
3300006606\|Ga0074062_12705436	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300006854\|Ga0075425_102508142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300006871\|Ga0075434_101521149	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	678	Open in IMG/M
3300006876\|Ga0079217_11434479	Not Available	542	Open in IMG/M
3300006881\|Ga0068865_101029704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	722	Open in IMG/M
3300006881\|Ga0068865_101110719	Not Available	697	Open in IMG/M
3300006881\|Ga0068865_101665559	Not Available	574	Open in IMG/M
3300006904\|Ga0075424_100438186	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300007004\|Ga0079218_10236147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	1429	Open in IMG/M
3300007004\|Ga0079218_11652874	Not Available	706	Open in IMG/M
3300009094\|Ga0111539_10239514	All Organisms → cellular organisms → Bacteria	2112	Open in IMG/M
3300009094\|Ga0111539_11595057	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300009156\|Ga0111538_10591981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1406	Open in IMG/M
3300009177\|Ga0105248_11304693	Not Available	821	Open in IMG/M
3300009545\|Ga0105237_12018357	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300009553\|Ga0105249_11929167	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	663	Open in IMG/M
3300009553\|Ga0105249_12054096	Not Available	644	Open in IMG/M
3300010399\|Ga0134127_12005272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300010400\|Ga0134122_10430448	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300012895\|Ga0157309_10068834	Not Available	918	Open in IMG/M
3300012904\|Ga0157282_10038900	Not Available	1105	Open in IMG/M
3300012905\|Ga0157296_10086581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	826	Open in IMG/M
3300012908\|Ga0157286_10335703	Not Available	565	Open in IMG/M
3300012951\|Ga0164300_10381579	Not Available	768	Open in IMG/M
3300012985\|Ga0164308_11544760	Not Available	611	Open in IMG/M
3300013306\|Ga0163162_11597986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	744	Open in IMG/M
3300014325\|Ga0163163_10143818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	2428	Open in IMG/M
3300014325\|Ga0163163_13191002	Not Available	511	Open in IMG/M
3300014326\|Ga0157380_11194968	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300014326\|Ga0157380_12896678	Not Available	546	Open in IMG/M
3300014969\|Ga0157376_11323115	Not Available	751	Open in IMG/M
3300014969\|Ga0157376_12395766	Not Available	567	Open in IMG/M
3300015372\|Ga0132256_103352665	Not Available	539	Open in IMG/M
3300015373\|Ga0132257_102072506	Not Available	734	Open in IMG/M
3300015373\|Ga0132257_104485698	Not Available	508	Open in IMG/M
3300015374\|Ga0132255_100412409	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300015374\|Ga0132255_102076323	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300017792\|Ga0163161_11645094	Not Available	567	Open in IMG/M
3300017792\|Ga0163161_12018023	Not Available	513	Open in IMG/M
3300017965\|Ga0190266_10253516	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	884	Open in IMG/M
3300017965\|Ga0190266_10644936	Not Available	650	Open in IMG/M
3300018476\|Ga0190274_11268377	Not Available	823	Open in IMG/M
3300018476\|Ga0190274_13919067	Not Available	504	Open in IMG/M
3300019356\|Ga0173481_10135230	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300022880\|Ga0247792_1076259	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300023073\|Ga0247744_1066718	Not Available	608	Open in IMG/M
3300023102\|Ga0247754_1189074	Not Available	519	Open in IMG/M
3300025925\|Ga0207650_10582896	Not Available	939	Open in IMG/M
3300025930\|Ga0207701_10768232	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	813	Open in IMG/M
3300025930\|Ga0207701_10953837	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300025932\|Ga0207690_11097148	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300025936\|Ga0207670_11328900	Not Available	610	Open in IMG/M
3300025937\|Ga0207669_10799516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300025937\|Ga0207669_11373959	Not Available	601	Open in IMG/M
3300025938\|Ga0207704_11125824	Not Available	668	Open in IMG/M
3300025940\|Ga0207691_10685622	Not Available	864	Open in IMG/M
3300026035\|Ga0207703_10879792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	857	Open in IMG/M
3300026041\|Ga0207639_10779315	Not Available	890	Open in IMG/M
3300026075\|Ga0207708_10175083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1701	Open in IMG/M
3300026075\|Ga0207708_10794240	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	814	Open in IMG/M
3300026118\|Ga0207675_102266771	Not Available	557	Open in IMG/M
3300027886\|Ga0209486_11108560	Not Available	538	Open in IMG/M
3300028381\|Ga0268264_12207155	Not Available	558	Open in IMG/M
3300028810\|Ga0307294_10322944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300030917\|Ga0075382_11119771	Not Available	601	Open in IMG/M
3300031231\|Ga0170824_122903215	Not Available	560	Open in IMG/M
3300031538\|Ga0310888_10727987	Not Available	610	Open in IMG/M
3300031538\|Ga0310888_11009204	Not Available	523	Open in IMG/M
3300031740\|Ga0307468_101874523	Not Available	570	Open in IMG/M
3300031943\|Ga0310885_10341719	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	784	Open in IMG/M
3300031944\|Ga0310884_10188503	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	1093	Open in IMG/M
3300032003\|Ga0310897_10507738	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	586	Open in IMG/M
3300032003\|Ga0310897_10536010	Not Available	572	Open in IMG/M
3300032075\|Ga0310890_11241449	Not Available	608	Open in IMG/M
3300032075\|Ga0310890_11445856	Not Available	565	Open in IMG/M
3300032174\|Ga0307470_11156746	Not Available	626	Open in IMG/M
3300032179\|Ga0310889_10583518	Not Available	575	Open in IMG/M
3300032205\|Ga0307472_101365285	Not Available	686	Open in IMG/M
3300032211\|Ga0310896_10165586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus gentianae	1061	Open in IMG/M
3300032211\|Ga0310896_10482362	Not Available	676	Open in IMG/M
3300033412\|Ga0310810_10610645	Not Available	1044	Open in IMG/M
3300033550\|Ga0247829_10459495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1052	Open in IMG/M
3300033550\|Ga0247829_10493335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1014	Open in IMG/M
3300033550\|Ga0247829_10571140	Not Available	939	Open in IMG/M
3300034354\|Ga0364943_0363078	Not Available	555	Open in IMG/M
3300034820\|Ga0373959_0088638	Not Available	723	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.70%
Host-Associated	Host-Associated	45.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.85%
Plants	Host-Associated → Plants	45.30%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.24%
Roots	Host-Associated → Plants → Roots	5.98%
Marine	Environmental → Aquatic → Marine	0.85%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	8.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	5.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.27%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.24%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	5.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.71%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.27%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.71%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00398640	2199352025	Soil	MDIKPKASPERLRQASLQLLEKTANQWGRPTSLTLAMNPILPWSPAVRIVKHAFEQDFTIVEAPTELGALYECGATPPKTFVASSTPQYGTYYGAMLQVVHEGRPGGSIVFVWRRVNGEWRLVAYRALE
Ga0055433_102012141	3300004025	Natural And Restored Wetlands	KLLERAADSWGRPSNLTEAMNPVLPWSPAVRIVKHTFDRDFTVVEAPDELGQRYACGAPPPPRAFQPTTTPQYGTYYGAILQVVQEGRVGGTLIIVWRRIDGQWRIVAYRTAE*
Ga0062589_1014254701	3300004156	Soil	LPCVADSMQVNPKSSPERLRQASLQLLERAAKEWRRPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGALPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE*
Ga0062590_1006400111	3300004157	Soil	DVLPCVADSMDMNPGTSPERLRQASLKLLEQAANQWGRPTSLTQAMYPVIPWSPAVHLVKHAFEQDFTIVAAPTELGVQYECGATPPKKFVPSATPEFGEYYGALLQVIHEGRPGGTIVLVWRRANNDWRLVSYRSVE*
Ga0062590_1022252471	3300004157	Soil	RLQQASLKLLEKTATQWGRPTSLTQAINPVLPWSPAVHVMKHAFEHDFTIVEAPTELGAMYECGATPPKKYVPSSTPQFGKYYGALLQVVHDGQPAGTIVFVWRRVNGDWRLVSYRGVE*
Ga0062591_1025705721	3300004643	Soil	LRQASLQLLERAANQWGRPTSLSLAMNPVVPWSPAVHIVKHAFEQDFTIVEAPTELGKLYECGATPPKTFVPSSTPQYGTYYGAVLQVVSEGRPGGTIVFVWRRVNGEWRLVAYRAVE*
Ga0062594_1012263712	3300005093	Soil	QEAASFLAPDVLRCVADSMEMNPKASPERLRQASLQLLERAANQWGRPTSLSLAMNPVVPWSPAVHIVKHAFEQDFTIVEAPTELGKLYECGATPPKTFVPSSTPQYGTYYGAVLQVVSEGRPGGTIVFVWRRVNGEWRLVAYRAVE*
Ga0066869_100402522	3300005165	Soil	LRQASLQLLEKTANQWGRPTSLTLAMNPILPWSPAVRTVKHAFEQDFTIVEAPTELGTLYECGATPPKTFVASSTPQYGTYYGAMLQVVHDGRPGGSVVFVWRRVTGEWRLVAYRALE*
Ga0065715_102251871	3300005293	Miscanthus Rhizosphere	GRAAKEWRRPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGALPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE*
Ga0070677_108395311	3300005333	Miscanthus Rhizosphere	TSLSLAMNPVVPWSPAVRIVKHAFEHDFTIVEAPTELGEMYACGATPPKKYVPSSAPQYGTYYGAVLQVVREGRPGGSLVLVWRRANAAWRLVAFRTVE*
Ga0070689_1007158402	3300005340	Switchgrass Rhizosphere	RLRQASLQLLERAAKEWRRPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGAVPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE*
Ga0070689_1015858302	3300005340	Switchgrass Rhizosphere	ASPERLRQASLELLEKAADEWGRPTSLSLAMNPVVPWSPATRIVKHAFEQDFTIVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRRVAGVWRLVAYRAVE*
Ga0070668_1016704661	3300005347	Switchgrass Rhizosphere	MFLAVDVLPCVADSMEMNPGTSPERLRQASLKLLERAANQWGRPTSLTQAMYPVIPWSPAVRVVKHAFSQDFTIVEGPTELGAQYECGAVPPKKYVPSTTPEYGKYYGALLQVAHEGRPGGTVVFVWRRVNNEWRLVSYRTLE*
Ga0070675_1020241001	3300005354	Miscanthus Rhizosphere	VLPCVADSMDMNPGTSPERLRQASLKLLEQAANQWGRPTSLTQAMYPVVPWSPAVHILKHAFEQDFTIVEAPTELGAQYECGATPPKKFVPSATPEFGKYYGVLLQVIKEGKAGGTIVFVWRRVNSDWRLVSYRAVE*
Ga0070671_1000403325	3300005355	Switchgrass Rhizosphere	ERLRQASLQLLEKTADEWGRPTSLSMAMNPVIPWSPAVRVLKHAFEQDFTVVEAPTELGEMYLCGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPGGTLVLGWRRIDGAWRLIAYRVAD
Ga0070673_1013487672	3300005364	Switchgrass Rhizosphere	PCVADSMELSPTSSPERLRQASLELLEKAADEWGRPTSLSLAMNPVVPWSPATRIVKHAFEHDFTVVEAPTELGEMYACGAAPPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLILVWRRVNAAWRMVAYRAVE*
Ga0070688_1003268402	3300005365	Switchgrass Rhizosphere	SFFAPEILRCVADSMEMNPKASPERLRQASLELLEKAADEWGRPTSLSLAMNPVVPWSPATRIVKHAFEQDFTIVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRRVAGVWRLVAYRAVE*
Ga0070688_1017269211	3300005365	Switchgrass Rhizosphere	PGMPPDRLRQASLKLLEKTANQWGRPTSLTQAMNPVLPWSPAVHVMKHAFEQDFTIVEAPTELGAMYECGATPPKKYVPSSTPEFGKFYGALLQVVHDGQPGGTVVFVWRRVHGEWRLVSYRALE*
Ga0070659_1011777711	3300005366	Corn Rhizosphere	AAAFFAPDVLRCVADSMQLNPQGSPDRLRQAGLQLLEKAAKEWGQPTSLSAAMNPVVPWSPAVHIVKHAFEQDFTIVEAPTELGDMYECGATPPKKFVASSTPQYGTYYGALLQVVREGRPGGTIVFVWRRVDGEWKLVSYRAVE*
Ga0070705_1008869901	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VSFLAPDVLRCVANSMELNPKTSPERLRRASLQLLQKTADEWGRPTSLSMAMNPVIPWSPAVRILKHAFEQDFTVVEAPTELGEMYECGATPPKKFVPSSTPQYGTYYGAVLQVVHEGRPGGSLVLVWRRLGGAWRLVAYRVVE*
Ga0073909_103111992	3300005526	Surface Soil	LLEKTANQWGRPTSLTLAMNPILPWSPAVRTVKHAFEQDFTIVEAPTELGTLYECGATPPKTFVASSTPQYGTYYGAMLQVVHDGRPGGSVVFVWRRVTGEWRLVAYRALE*
Ga0070704_1013330002	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KTAIQWGRPTSLTQAMNPVIPWSPAVHVMKHAFEQDFTIVEAPTELGAMYECGATPPKKFVPSSTPEFGKYYGALLQVVHDGQPGGTIVFVWRRVNGDWRLVSYRAVE*
Ga0068857_1025661301	3300005577	Corn Rhizosphere	EASAFLAPDVLPCVADSMDIDPKASTERLKQASLQLLEKTAKQWGRPTSLTQAMNPVLPWSPAVKVMKHAFDHDFTIVEAPTELGAQYECGTTPPKKFVPSATPQYGTYYGAVLQVVQDGRPGGTIVLVWRRVNGEWRLVSYRAVE*
Ga0066905_1016256211	3300005713	Tropical Forest Soil	TDWLIRHNYQDAQAFLAPQVLKCVADSLDLGPGTSQEQLRQGSLQLLEKTANEWGRPRNLTEAMNPVLPWSPSVRVVKHAFDKDFTVVEAPTELGAQYECGVTPPKTFRPTATPEYGTYFGALLQVVREGRPGGTLVLVWRRVETEWRLVAYRAVE*
Ga0068860_1026529711	3300005843	Switchgrass Rhizosphere	QASLQLLEKTADEWGRPTSLSMAMNPVIPWSPAVRIVKHAFEQDFTVVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPGGTLVLVLRRVGGAWRLVAYRVVD*
Ga0068862_1015824241	3300005844	Switchgrass Rhizosphere	LTDWLIRRDYREAAAFMAPDVLPCVADSLDMNPKSPPDRLQQASLKLLEKTATQWGRPTSLTQAMNPVLPWSPAVHVMKHAFEQDFTIVEAPTELGAMYECGATPPKKYVPSSTPQFGKYYGALLQVVHDGQPAGTIVFVWRRVNGDWRLVSYRGVE*
Ga0097621_1019148922	3300006237	Miscanthus Rhizosphere	LLEKTASQWGRPTSLTQAMNPVIPWSPAVRVVKHAFDQDFTIVEAPTELGALYECGVTPPKKFVPSATPEYGKYYGAMLQVVHDGRPGGTIVFVWRRVNTEWRLVAYRAVE*
Ga0068871_1013625512	3300006358	Miscanthus Rhizosphere	SMEVNPKASPERLRQASLQLLEKTADEWGRPTSLSVAMNPVIPWSPAVRVVKHAFEQDFTVVEAPTELGEMYECGATPPKKFVPASAPQYGTYYGAVLQVVREGRPGGSIVLVWRRVTGAWRLVAFRAVE*
Ga0068871_1015845471	3300006358	Miscanthus Rhizosphere	IDSTASAERLRHAGLQLLEKIANEWGHPRNLSEAMNPVFPWSPSVRVVRHGFDRDFTIVEAPSELGAQYACGAPPPPKGFKPSTTPEYGTYYGVILQVVREGQPGGTIVFVWRRVDDEWRLVAYRAVD*
Ga0068871_1017415511	3300006358	Miscanthus Rhizosphere	FLAPDVLPCVADSMDMNPGTSPERLRQASLKLLEQAANQWGRPTSLTQAMYPVVPWSPAVHILKHAFEQDFTIVEAPTELGAQYECGATPPKKFVPSATPEFGKYYGVLLQVIKEGKAGGTIVFVWRRVSSDWRLVSYRSVE*
Ga0068871_1023603672	3300006358	Miscanthus Rhizosphere	RLRQASLKLLEQAANQWGRPTSLTQAMYPVTPWSPAVHVLKHAFDQDFTIVEAPTELGAQYECGATPPKKFVPSTTPEFGKYYGALLQVIQEGKPGGTIVFVWRRVANEWRLVSYRAVE*
Ga0074062_127054361	3300006606	Soil	EKTANQWGRPTSLTLAMNPIVPWSPAVHLVKQAFERDFTIVEAPAELGALYECGATPPKTFVASSTPQYGTYYGAMLQVVHEGRPGGSLVLVWRRVGGEWRLVAYRALE*
Ga0075425_1025081421	3300006854	Populus Rhizosphere	QLLEKTASLWGRPTSLSLAMNPVVPWSPAVRIVKHAFEQDFTIVEAPTELGQMYECGVTPPKKFVPAATPQYGMYYGALLQVVREGRPGGTLVLVWRRLNDQWRMVAYRALD*
Ga0075434_1015211491	3300006871	Populus Rhizosphere	LLERAAKEWRHPASLRSAMNPVVPWSPAVRVVRHAFEQDFTIVEAPTELGEMYACGAVPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE*
Ga0079217_114344791	3300006876	Agricultural Soil	DWLIRRNYRDAQAFLAPDVLPCVADSLEMNPTAPPDRLRQASLQLLEKTANTWGRPRTLSEAMNPVFPWAPSVRVLEHAFDRDFTIVEAPTEIGRQYECGATAPKGFQPSGALQYGMYYGALLQVVMEGRQGGTIVFVWRRVGGEWRLVAYRAVD*
Ga0068865_1010297041	3300006881	Miscanthus Rhizosphere	ASLQLLEKTADEWGRPTSLSMAMNPVIPWSPAVRIVKHAFEQDFTVVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPGGTLVLVLRRVGGAWRLVAYRVVD*
Ga0068865_1011107192	3300006881	Miscanthus Rhizosphere	TDWVIRRNYEEAVAFLAPEAFACVADSAGIDSTASAERLRHAGLQLLEKIANEWGHPRNLSEAMNPVFPWSPSVRVVRHGFDRDFTIVEAPSELGAQYACGAPPPPKGFKPSTTPEYGTYYGVILQVVREGQPGGTIVFVWRRVDDEWRLVAYRAVD*
Ga0068865_1016655592	3300006881	Miscanthus Rhizosphere	ADSMDMNPKSSPERLRQASLKLLERAADQWGRPTSLTQAMFPVVPWSPAVRVLKHAFEQDFTIVEAPTEIGALYECGVTPPKNFVPSTAPEFGKYYGALLQVIHEGRPGGTIIFVWRRIASDWRLVSYRVVE*
Ga0075424_1004381863	3300006904	Populus Rhizosphere	KSSPERLRQASLQLLERAAKEWRRPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGAVPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRISGEWRLVAYRAVE*
Ga0079218_102361472	3300007004	Agricultural Soil	HERRWSGFANWWSEVFGGVRFGVQSDEGDGPLGGAPTRLPSPVPPNRAATAPIPEVADAVQEFLSDWLIRRNYQEAASFFAPDILRCVADSMELNPKTSPARLRQASLQLLEQTAGEWGRPTSLSMAMNPVIPWSPAVRIVKQAFEQDFAVVEAPTELGEMYECGAAPPTRFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRQVGGAWRLVAYRAVD*
Ga0079218_116528741	3300007004	Agricultural Soil	KNVLIRRNYRDAQAFLAPDVLPCVADSLEMNPTASPDRLRQGSLQLLEKTANTWGRPRTLSEAMNPVFPWAPSVRVLEHAFDRDFTIVEAPTEIGRQYECGATAPKGFQPSGALQYGMYYGALLQVVMEGRQGGTIVFVWRRVGGEWRLVAYRAVD*
Ga0111539_102395142	3300009094	Populus Rhizosphere	MELNANAPPERLREASLELLEREADEWGRPTSLSLAMNPVVPWSPAVRIVKHAFEHDFTIVEAPTELGEMYACGATPPKKYVPSSAPQYGTYYGAVLQVVREGRPGGSLVLVWRRANAAWRLVAFRTVE*
Ga0111539_115950571	3300009094	Populus Rhizosphere	VQEFLTAWLIRRNYHEASGFLAPDALPCVADSMDMNPSASPERLRQASLKLLERAANQWGRPTSLTQAMYPVIPWSPAVHVVKHAFDGDFTIVEAPTELGTQYECGATPPKKFVPSATPQFGEYYGALLQVIHEGRPGGTIVLVWRRVNNDWRLVSYRSVE*
Ga0111538_105919812	3300009156	Populus Rhizosphere	WVIRRNYKEAAAFLAPDVLPCVADSLDKNAKTPPGRLQQASLTLLEKTANQWGRPTSLTQAMNPVLPWSPAVHVIKHAFEQDFTIVEAPTELGAMYECGATPPKKFVPSSTPEFSKYYGALLQIVHDGQPGGTIVFVWRRVNGEWRLVSYRAVD*
Ga0105248_113046931	3300009177	Switchgrass Rhizosphere	FFAPDVLPCVADSMDMNPKTSPERLRQASVKLLEKTANQWGRPTSLTQAMNPVIPWSPAVRVVKHAFDQDFTIVEAPTELGALYECGVTPPKKFVPSATPEYGKYYGAMLQVVHDGRPGGTIVFVWRRVNNEWRLVAY*
Ga0105237_120183571	3300009545	Corn Rhizosphere	LAPEAFACVADSAGIDSTASAERLRHAGLQLLEKIANEWGHPRNLSEAMNPVFPWSPSVRVVRHGFDRDFTIVEAPSELGAQYACGAPPPPKGFKPSTTPEYGTYYGVILQVVREGQPGGTIVFVWRRVDGEWRLVAYRAVD*
Ga0105249_119291672	3300009553	Switchgrass Rhizosphere	LERAAKEWRRPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGAVPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE*
Ga0105249_120540961	3300009553	Switchgrass Rhizosphere	NYQEAAAFLAPDVLTCVADSLEMNPGTPPDRLRQASLKLLEKTANQWGRPTSLTQAMNPVLPWSPAVHVMKHAFEQDFTMVEAPTELGAMYECGATPPKKFVPSSTPEFGKYYGALLQVVHDGQPGGTIVFVWRRVNGDWRLVSYRAVE*
Ga0134127_120052721	3300010399	Terrestrial Soil	TRPPTAVPPNRATASVPDIADAVQEFLADWLIRRNYQEAAAFLAPDVLPCVADSLDMSPKTSPERLRQASVKLLEQTANQWGRPTSLTQAMNPVVPWSSTVHVMKHAFDQDFTIVDAPTELGALYECGTTPPKKFVPSTTPEYGKYYGALLQAVHEGRPGGTIVFVWRRVSSEWRLVAYRAVD*
Ga0134122_104304481	3300010400	Terrestrial Soil	WLIRRNYQEAASFFAPDILRCVADSMGLNPKTSPERLRRASLQLLQKTADEWGRPTSLSMAMNPVIPWSPAVRILKHAFEQDFTVVEAPTELGEMYECGATPPKKFVPSSTPQYGTYYGAVLQVVHEGRPGGSLVLVWRRLGGAWRLVAYRVVE*
Ga0157309_100688342	3300012895	Soil	QLLERAAKEWRRPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGAVPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE*
Ga0157282_100389002	3300012904	Soil	ERAAKEWRRPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGALPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE*
Ga0157296_100865812	3300012905	Soil	PGTSPERLRQASLKLLERAANQWGRPTSLTQAMYPVIPWSPAVHVVKHAFDGDFTVVEAPTELGAQYECGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRRVAGVWRLVAYRAVE*
Ga0157286_103357031	3300012908	Soil	LLERAADEWGRPTSLSLAMNPVVPWSPAVRIVKHAFEHDFTIVEAPTELGEMYACGATPPKKYVPSSAPQYGTYYGAVLQVVREGRPGGSLVLVWRRANAAWRLVAFRTVE*
Ga0164300_103815791	3300012951	Soil	IRRNYEEAVAFLAPEAFACVADSAGIDSTASAERLRHAGLQLLEKIANEWGHPRNLSEAMNPVFPWSPSVRVVRHGFDRDFTIVEAPAELGAQYACGAPPPPKGFKPSTTPEYGTYYGVILQVVREGQPGGTIVFVWRRVDDEWRLVAYRAVD*
Ga0164308_115447601	3300012985	Soil	LLEKTANLWGRPTSLSLAMNPVVPWSPAVLTVKHAFEQDFTIVEAPTELGQMYECGVTPPKKFVPSATPQYGTYYGALLQVVREGRPGGTLVLVWRRLNDQWRMVAYRALD*
Ga0163162_115979861	3300013306	Switchgrass Rhizosphere	SMGLNPKTSPERLRQASLQLLEKTADEWGRPTSLSMAMNPVIPWSPAVRVLKHAFEQDFTVVEAPTELGEMYLCGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPGGTLVLGWRRIDGAWRLIAYRVAD*
Ga0163163_101438183	3300014325	Switchgrass Rhizosphere	SMGLNPKTSPERLRRASLQLLEKTADEWGRPTSLRMAMNPVIPWSPAVRVLKHPFEQDFTVVEAPTELGEMYLCGATPTKKFVPSSTPQYGTYYGAVLQVVHQGRPDGTLVLGWRRIDGAWRLVAYRVAD*
Ga0163163_131910021	3300014325	Switchgrass Rhizosphere	QWGRPTSLTQAMNPVIPWSPAVRVVKHAFDQDFTIVEAPTELGALYECGVTPPKKFVPSATPEYGKYYGAMLQVVHDGRPGGTIVFVWRRVNTEWRLVAYRAVE*
Ga0157380_111949682	3300014326	Switchgrass Rhizosphere	MDMNASTSPERLRQASLKLLERAANQWGRPTSLTQAMYPVIPWSPAVHVVKHAFDGDFTIVEAPTELGTQYECGATPPKKFVPSATPQFGEYYGALLQVIHEGRPGGTIVLVWRRVNNDWRLVSYRSVE*
Ga0157380_128966781	3300014326	Switchgrass Rhizosphere	LRQASVKLLEQTANQWGRPTSLTQAMNPVVPWSSTVHVMKHAFDQDFTIVEAPMELGALYECGTTPPKKFVPSTTPEYGKYYGALLQAVHEGRPGGTIVFVWRRVSSEWRLVAYRAVD*
Ga0157376_113231152	3300014969	Miscanthus Rhizosphere	WLIRRNYQEAASFFAPDILRCVADSMGLNPKTSPERLRQASLQLLEKTADEWGRPTSLSVAMNPVIPWSPAVRVVKHAFEQDFTVVEAPTELGEMYECGATPPKKFVPASAPQYGTYYGAVLQVVREGRPGGSIVLVWRRVTGAWRLVAFRAVE*
Ga0157376_123957661	3300014969	Miscanthus Rhizosphere	LEKTANQWGRPTSLTLAMNPVVPWSPTVRIVKHAFEQDFTIVEAPTELGELYECGATPPKTFVPSATPQYGTYYGALLQVVREGRAGGTIVFVWRQVSGAWRLVAYRAVD*
Ga0132256_1033526652	3300015372	Arabidopsis Rhizosphere	GHPRNLSEAMNPVFPWSPSVRVIRHGFDRDFTIVEAPSELGAQYACGAPPPPKGFKPSTTPEYGTYYGAILQVVREGQPGGTVVFVWRRVDGEWRLVAYRAVD*
Ga0132257_1020725061	3300015373	Arabidopsis Rhizosphere	TANQWGRPTSLTQAMNPVLPWSPAVHVMKHAFEQDFTIVEAPTELGAMYECGATPPKKFVPSSTPEFGKYYGALLQVVHDGQPGGTIVFVWRRVNGEWRLVSYRAVD*
Ga0132257_1044856981	3300015373	Arabidopsis Rhizosphere	PDVLRCVADSMELNSKSSPERMRQASLQLLEKAADEWGRPTSLSMAMNPVIPWSPAVRVLKHPFEQDFAVVEAPTELGEMYLCGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPDGTLVLGWRRMDGAWRLVAYRVAD*
Ga0132255_1004124091	3300015374	Arabidopsis Rhizosphere	DMNPGTPPDRLRQASLKLLEKTANQWGRPTSLTQAMNPVLPWSPAVHVMKHAFEQDFTIVEAPTELGAMYECGATPPKKFVPSSTPEFGRYYGALLQVVHDGQPGGTIVFVWRRVNGDWRLVSYRAVE*
Ga0132255_1020763232	3300015374	Arabidopsis Rhizosphere	TSLTQAMNPVLPWSPAVHVMKHAFEQDFTIVEAPTELGAMYECGATPPKKFVPSSTPEFGKYYGALLRVVHDGQPGGTIVFVWRRVNGDWRLVSYRAVD*
Ga0163161_116450942	3300017792	Switchgrass Rhizosphere	LKLLEQAANQWGRPTSLTQAMYPVTPWSPAVHVLKHAFDQDFTIVEAPTELGAQYECGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLILVWRRVNAAWRMVAYRAVE
Ga0163161_120180231	3300017792	Switchgrass Rhizosphere	PTSLTQAMNPVIPWSPAVRVVKHAFDQDFTIVEAPTELGALYECGVTPPKKFVPSATPEYGKYYGAMLQVVHDGRPGGTIVFVWRRVNNEWRLVAYRAVE
Ga0190266_102535161	3300017965	Soil	APDILRCVADSMDLNPKASPERLQQASLQLLEKTADEWGRPTSLSLAMNPVIPWSPAVRTVKHAFEQDFTVVEAPTDLGEMYECGATAPDKFVPSSTPQYGTYYGAVLQVVHKGRPGGTLVLVWRQVGGAWRLVAYRVVD
Ga0190266_106449362	3300017965	Soil	DWLIRRNYQEAASFFAPDVLRCVADSLELNPKSSPERLRQASLRLLEKAADEWGRPTSLSLAMNPVVPWSPVVRIVKHAFEHDFTIVEAPTELGEMYACGATPPKKYVPSSAPQYGTYYGAVLQVVREGRPGGTLVLVWRRANAAWRLVAFRTVE
Ga0190274_112683771	3300018476	Soil	ADGPFGGAPTRPPSAVPPNRAVTAPIPEVADAVQELLTDWLIRRNYQEAASFFAPDILRCVADSMDLNPKASPERLRQASLQLLEKTADEWGRPTSLSLAMNPVIPWSPAVRTVKHAFEQDFTVVEAPTELGEMYECGATAPDKFVPSSTPQYGTYYGAVLQVVHKGRPGGTLVLVWRQVGGAWRLVAYRVVD
Ga0190274_139190672	3300018476	Soil	DSMELNPQSSPERLRQASLELLEKAADEWGRPTSLSLAMNPVVPWSPATRIVKHAFEHDFTIVEAATELGEMYACGAATPPKKFVPSSTPQYGTYYGAVFQVVREGRPGGTLVLVWRRVNAAWRMVAYRAVE
Ga0173481_101352303	3300019356	Soil	ASPERLREASLELLERAADEWGRPTSLSLAMNPVVPWSPAVRIVKHAFEHDFTIVEAPTELGEMYACGATPPKKYVPSSAPQYGTYYGAVLQVVREGRPGGSLVLVWRRANAAWRLVAFRTVE
Ga0247792_10762591	3300022880	Soil	KSSPERLRQASLQLLERAAKEWRRPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGAVPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE
Ga0247744_10667182	3300023073	Soil	QEAAAFFAPDILRCVADSMEMNANASPERLREASLELLERAADEWGRPTSLSLAMNPVVPWSPAVRIVKHAFEHDFTIVEAPTELGEMYACGATPPKKYVPSSAPQYGTYYGAVLQVVREGRPGGSLVLVWRRANAAWRLVAFRTVE
Ga0247754_11890741	3300023102	Soil	ILRCVADSMEMNPKASPERLRQASLELLEKAADEWGRPTSLSLAMNPVVPWSPATRIVKHAFEQDFTIVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRRVAGVWRLVAYRAVE
Ga0207650_105828962	3300025925	Switchgrass Rhizosphere	PCVADSLDMNPKSPPARLQQASLKLLEKTATQWGRPTSLTQAVDPVLPWSPAVHVMKHAFEHDFTIVEAPTELGAMYECGATPPKKYVPSSTPEFGKYYGALLQVVHDGQPGGTIVFVWRRVNGEWRLVSYRAVE
Ga0207701_107682321	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	SLQLLEKTADEWGRPTSLRMAMNPVIPWSPSVRVLKHPFEQDFTVVEAPTELGEMYLCGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPGGTLVLGWRRIDGAWRLVAYRVAD
Ga0207701_109538371	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VSFFAPDVLPCVADSMQVNPKSSPERLRQASLQLLERAAKEWRRPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGAVPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE
Ga0207690_110971482	3300025932	Corn Rhizosphere	AAAFFAPDVLRCVADSMQLNPQGSPDRLRQAGLQLLEKAAKEWGQPTSLSAAMNPVVPWSPAVHIVKHAFEQDFTIVEAPTELGDMYECGATPPKKFVASSTPQYGTYYGALLQVVREGRPGGTIVFVWRRVDGEWKLVSYRAVE
Ga0207670_113289002	3300025936	Switchgrass Rhizosphere	ASPERLRQASLELLEKAADEWGRPTSLSLAMNPVVPWSPATRIVKHAFEQDFTIVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRRVAGVWRLVAYRAVE
Ga0207669_107995162	3300025937	Miscanthus Rhizosphere	WLIRRNYQEASAFLAPDVLPCVADSMDMNPGTSPERLRQASLKLLEQAANQWGRPTSLTQAMYPVVPWSPAVHILEHAFEQDFTIVEAPTELGAQYECGATPPKKFVPSATPEFGKYYGVLLQVIKEGKAGGTIVFVWRRVNSDWRLVSYRAVE
Ga0207669_113739591	3300025937	Miscanthus Rhizosphere	ERAADQWGRPTSLTQAMFPVVPWSPAVRVLKHAFEQDFTIVEAPTEIGALYECGVTPPKNFVPSTAPEFGKYYGALLQVIHEGRPGGTIIFVWRRIASDWRLVSYRVVE
Ga0207704_111258241	3300025938	Miscanthus Rhizosphere	ADSMDMNPKSSPERLRQASLKLLERAADQWGRPTSLTQAMFPVVPWSPAVRVLKHAFEQDFTIVEAPTEIGALYECGVTPPKNFVPSTAPEFGKYYGALLQVIHEGRPGGTIIFVWRRIASDWRLVSYRVVE
Ga0207691_106856222	3300025940	Miscanthus Rhizosphere	LEKTASQWGRPTSLTQAMNPVIPWSPAVRVVKHAFDQDFTIVEAPTELGALYECGVTPPKKFVPSATPEYGKYYGAMLQVVHDGRPGGTIVFVWRRVNTEWRLVAYRAVE
Ga0207703_108797921	3300026035	Switchgrass Rhizosphere	DILRCVADSMGLNPKTSPERLRQASLQLLEKTADEWGRPTSLSMAMNPVIPWSPAVRVLKHAFEQDFTVVEAPTELGEMYLCGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPGGTLVLGWRRIDGAWRLIAYRVAD
Ga0207639_107793153	3300026041	Corn Rhizosphere	LSSIRISRATWSSPPVRTTGSPSLSLAMNPVVPWSPAVHIVKHAFEQDFTIVEAPTELGKLYECGATPPKTFVPSSTPQYGTYYGAVLQVVSEGRPGGTIVFVWRRVNGEWRLVAYR
Ga0207708_101750833	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DSMEMNPKASPERLRQASLELLEKAADEWGRPTSLSLAMNPVVPWSPATRIVKHAFEQDFTIVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRRVAGVWRLVAYRAVE
Ga0207708_107942401	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ADWLIRRNYQEAVSFFAPDVLRCVADSMELNPKTSPERLRRASLQLLEKTADEWGRPTSLSMAMNPVIPWSPAVRIVKHAFEQDFTVVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPGGTLVLVLRRVGGAWRLVAYRVVD
Ga0207675_1022667712	3300026118	Switchgrass Rhizosphere	ERAANQWGRPTSLSLAMNPVVPWSPAVHIVKHAFEQDFTIVEAPTELGELYECGATPPKTFVPSSTPQYGTYYGAVLQVVSEGRPGGTIVFVWRRVNGEWRLVAYRAVE
Ga0209486_111085601	3300027886	Agricultural Soil	ELGPKSSPARLRQASLRLLEETADEWGRPTSLSMAMNPVIPWSPAVRIVKQAFEQDFAVVEAPTELGEMYECGAAPPTRFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRQVGGAWRLVAYRAVD
Ga0268264_122071551	3300028381	Switchgrass Rhizosphere	VAFLAPEAFACVADSAGIDSTASAERLRHAGLQLLEKIANEWGHPRNLSEAMNPVFPWSPSVRVVRHGFDRDFTIVEAPSELGAQYACGAPPPPKGFKPSTTPEYGTYYGVILQVVREGQPGGTIVFVWRRVDDEWRLVAYRAVD
Ga0307294_103229441	3300028810	Soil	QASLKLLEQAANQWGRPTSLTQAMYPVVPWSPAVHILKHAFDQDFTIVEAPTEIGAQYECGATPPKKFVPSATPEFGKYYGVLLQVIKEGKAGGTIVFVWRRLNNDWRLVSYRSVE
Ga0075382_111197711	3300030917	Soil	FLAPDVLRCVADSMDIKPKASPERLRQASLQLLEKTANQWGRPTSLTLAMNPILPWSPAVRIVKHAFEQDFTIVEAPTELGALYECGATPPKTFVASPTPQYGTYYGAMLQVVHEGRPGGSIVFVWRRVNGEWRLVAYRALE
Ga0170824_1229032151	3300031231	Forest Soil	WGRPTSLTLAMNPILPWSPAVRIVKHAFEQDFTIVEAPTELGALYECGATPPKTFVASPTPQYGTYYGAMLQVVHEGRPGGSIVFVWRRVNGEWRLVAYRALE
Ga0310888_107279871	3300031538	Soil	YQEAVSFLAPDVLRCVADSMELNPKTSPERLRRASLQLLEKTADEWGRPTSLSMAMNPVIPWSPAVRILKHAFEQDFTVVEAPTELGELYECGAMPPKKFVPSSTPQYGTYYGAALQVVHEGRPGGTLVLVWRRVGGAWRLVAYRVVD
Ga0310888_110092041	3300031538	Soil	IRRNYQEAVSFLAPDVLRCVADSMELNPKTSPERLRRASLQLLEKTADEWGRPTSLRMAMNPVIPWSPSVRVLKHPFEQDFTVVEAPTELGEMYLCGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPDGTLVLGWRRIDGAWRLVAYRVAD
Ga0307468_1018745232	3300031740	Hardwood Forest Soil	ERLRQASLQLLEKVADEWGRPTSLSLAMNPVVPWSPAVRIVKHAFEHDFTIVEAPTELGEMYACGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRRANAEWRLVAYRAVE
Ga0310885_103417192	3300031943	Soil	QASFQLLERAAKEWRRPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGAVPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE
Ga0310884_101885032	3300031944	Soil	WLIRRNYQEAVSFFAPDVLRCVADSMELNPKTSPERLRRASLQLLEKTADEWGRPTSLRMAMNPVIPWSPSVRVLKHPFEQDFTVVEAPTELGEMYLCGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPDGTLVLGWRRIDGAWRLVAYRVAD
Ga0310897_105077381	3300032003	Soil	RPTSLRSAMNPVIPWSPAVRVVKHAFEQDFTIVEAPTELGEMYACGAVPPKKFVPSSTPQYGTYYGVLLQVVQEGRPGGALVLVWRRINGEWRLVAYRAVE
Ga0310897_105360102	3300032003	Soil	PKTSPERLRRASLQLLEKTADEWGRPTSLSMAMNPVIPWSPAVRILKHAFEQDFTVVEAPTELGELYECGAMPPKKFVPSSTPQYGTYYGAALQVVHEGRPGGTLVLVWRRLGGAWRLVAYRVVD
Ga0310890_112414491	3300032075	Soil	SPERLRQASLQLLERAANQWGRPTSLSLAMNPVVPWSPAVHIVKHAFEQDFTIVEAPTELGELYECGATPPKAFVPSSTPQYGTYYGAVLQVVSEGRPGGTMVLVWRRIHGEWRLVSYRAVE
Ga0310890_114458561	3300032075	Soil	LPCVADSLDLNPKSPPDRLQQASLKLLEKTAIQWGRPTSLTQAMNPVIPWSPAVHVMKHAFEQDFTIVEAPTELGAMYECGATPPKKFVPSSTPEFSKYYGALLQIVHDGQPGGTIVFVWRRVNGEWRLVSYRAVD
Ga0307470_111567461	3300032174	Hardwood Forest Soil	AANQWGRPTSLTLAMNPVVPWSPAVRIVKHAFEQDFTIVEVPTELGALYECGATPPKNFVPSSTPQYGTYYGALLQVVREGRPGGSIAFVWRRVNGEWRLVAYRALE
Ga0310889_105835181	3300032179	Soil	NPKTSPERLRRASLQLLEKTADEWGRPTSLRMAMNPVIPWSPAVRVLKHPFEQDFTVVEAPTELGEMYLCGATPPKKFVPSSTPQYGTYYGAVLQVVHQGRPDGTLVLGWRRIDGAWRLVAYRVAD
Ga0307472_1013652851	3300032205	Hardwood Forest Soil	RNYPEAVSFFAPDILRCVADSMDINAKASPERLRQASLQLLEKTANLWGRPTSLSLAMNPVVPWSPAVRIVKHAFEQDFTIVEAPTELGQMYECGVTPPKKFVPASTPQYGTYYGAVLQVVHQGRPDGTLVLGWRRIDGAWRLVAYRVAD
Ga0310896_101655861	3300032211	Soil	IRRNYQEAVSFLAPDVLRCVADSMELNPKTSPERLRRASLQLLEKTADEWGRPTSLSMAMNPVIPWSPAVRILKHAFEQDFTVVEAPTELGELYECGAMPPKKFVPSSTPQYGTYYGAALQVVHEGRPGGTLVLVWRRLGGAWRLVAYRVVD
Ga0310896_104823621	3300032211	Soil	RNYQEAASFFAPEILRCVADSMEMNPKASPERLRQASLELLEKAADEWGRPTSLSLAMNPVVPWSPATRIVKHAFEQDFTIVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRRVAGVWRLVAYRAVE
Ga0310810_106106451	3300033412	Soil	AAFFAPSLLRCVADSMQLNPNAPPERLRQAGLQLLEKSAKEWGQPTSLSVAMNPVVPWSPAVHIVKHAFENDFTIVEAPTELGEMYECGTTPPKKFVASSTPQYGTYYGALLQVVREGRPGGAIILVWRRVGGEWKLVSYRAVE
Ga0247829_104594951	3300033550	Soil	QEAASFFAPDILRCVADSLEMNPTASPERLRQASLELLEKAADEWGRPTSLSLAMNPVVPWSPATRIVKHAFEQDFTIVEAPTELGELYECGATPPKKFVPSSTPQYGTYYGAVLQVVREGRPGGTLVLVWRRVAGVWRLVAYRAVE
Ga0247829_104933352	3300033550	Soil	DWVVRRNFREAQAFLAPDVLKCVADSAEMDPRTSPERLRQVSLQLLEKSANSWGRPGNLTEAMNPVLPWSPSARVVAHAFDKDFTIVEAPTELGALYECGATPPKRFTPSNTPQYGTYYGVLIEVVHEGQPGGAMVFVWRRVSGEWRLVAYRAIE
Ga0247829_105711402	3300033550	Soil	AFLAPDALPCVADSMDMNPSTSPERLRQASLKLLEQAANQWGRPTSLTQAMYPVIPWSPAVHVVKHAFEQDFTIVEAPTELGAQYECGATPPKKFVPSATPEFGEYYGALLQVIQEGRPGGTIVLVWRRVSNDWRLVSYRSVE
Ga0364943_0363078_107_532	3300034354	Sediment	LAPDIGRCVADSMEINPKASPERLRQASLQLLEKTANEWGRPTSLSLAMNPVVPWSPAVRIVKHAFEQDFTLVEAPTELGEMYECGATPPKKFVQSSTPQYGTYYGALLQVVREGRPGGTIVFVWRRVNGEWRLVAYRAVE
Ga0373959_0088638_360_722	3300034820	Rhizosphere Soil	DRLRQASLKLLEKTANQWGRPTSLTQAMNPVLPWSPAVHVMKHAFEQDFTMVEAPTELGAMYECGATPPKKFVPSSTPEFGKYYGALLQVVHDGQPGGTIVFVWRRVNGDWRLVSYRAVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077409

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences