Metagenome / Metatranscriptome Family F077408

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F077408
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	55 residues
Representative Sequence	MVKPRSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAADESVEELADTD
Number of Associated Samples	105
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.61 %
% of genes near scaffold ends (potentially truncated)	94.02 %
% of genes from short scaffolds (< 2000 bps)	85.47 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (71.795 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (35.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.607 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF03699	UPF0182	7.69
PF01435	Peptidase_M48	4.27
PF01904	DUF72	4.27
PF05239	PRC	2.56
PF00175	NAD_binding_1	2.56
PF01987	AIM24	2.56
PF08282	Hydrolase_3	2.56
PF13442	Cytochrome_CBB3	1.71
PF01068	DNA_ligase_A_M	1.71
PF11154	DUF2934	1.71
PF00270	DEAD	1.71
PF03729	DUF308	1.71
PF07786	HGSNAT_cat	1.71
PF02511	Thy1	1.71
PF00561	Abhydrolase_1	0.85
PF01814	Hemerythrin	0.85
PF13537	GATase_7	0.85
PF08335	GlnD_UR_UTase	0.85
PF04185	Phosphoesterase	0.85
PF09859	Oxygenase-NA	0.85
PF00210	Ferritin	0.85
PF00990	GGDEF	0.85
PF12849	PBP_like_2	0.85
PF01161	PBP	0.85
PF02265	S1-P1_nuclease	0.85
PF14696	Glyoxalase_5	0.85
PF04264	YceI	0.85
PF09364	XFP_N	0.85
PF00156	Pribosyltran	0.85
PF08281	Sigma70_r4_2	0.85
PF00702	Hydrolase	0.85
PF00294	PfkB	0.85
PF00989	PAS	0.85
PF00072	Response_reg	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	7.69
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	4.27
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	2.56
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	2.56
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	2.56
COG2013	AIM24 protein, required for mitochondrial respiration	Energy production and conversion [C]	2.56
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	2.56
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	2.56
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.71
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.71
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	1.71
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	1.71
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	1.71
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.85
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.85
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	0.85
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.79 %
Unclassified	root	N/A	26.50 %
Polyangium	genus	Polyangium	1.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.79 %
Unclassified	root	N/A	26.50 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	1.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.79 %
Unclassified	root	N/A	26.50 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	1.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.17 %
Unclassified	root	N/A	26.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.84 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	1.71 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.71 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	1.71 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.11 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.71 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	1.71 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.85 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.85 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.85 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.85 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.85 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11.11 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.71 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	1.71 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.85 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.85 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.85 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.85 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.82 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.71 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	1.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.85 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.85 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.85 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.82 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.71 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	1.71 %
Candidatus Nitrospira nitrificans	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrificans	0.85 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.82 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.71 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	1.71 %
Rubrobacter marinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter marinus	0.85 %
Candidatus Nitrospira nitrificans	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrificans	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig60023	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300001593\|JGI12635J15846_10123668	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300001593\|JGI12635J15846_10149969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1600	Open in IMG/M
3300001661\|JGI12053J15887_10580547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	533	Open in IMG/M
3300002245\|JGIcombinedJ26739_100331185	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300005178\|Ga0066688_10036570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2757	Open in IMG/M
3300005180\|Ga0066685_11061945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	531	Open in IMG/M
3300005436\|Ga0070713_100477459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1174	Open in IMG/M
3300005446\|Ga0066686_10313970	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300005454\|Ga0066687_10214364	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1058	Open in IMG/M
3300005536\|Ga0070697_100127702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2130	Open in IMG/M
3300005536\|Ga0070697_101093557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	709	Open in IMG/M
3300005536\|Ga0070697_101389203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	627	Open in IMG/M
3300005554\|Ga0066661_10457525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	778	Open in IMG/M
3300005569\|Ga0066705_10404674	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	855	Open in IMG/M
3300005616\|Ga0068852_101571564	Not Available	680	Open in IMG/M
3300006034\|Ga0066656_10432733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300006052\|Ga0075029_100157852	All Organisms → cellular organisms → Bacteria → Acidobacteria	1398	Open in IMG/M
3300006059\|Ga0075017_100141544	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300006237\|Ga0097621_101966382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300006796\|Ga0066665_10165536	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300009029\|Ga0066793_10413850	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	774	Open in IMG/M
3300009090\|Ga0099827_11453597	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300009545\|Ga0105237_11527284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300009618\|Ga0116127_1127549	Not Available	650	Open in IMG/M
3300009640\|Ga0116126_1247478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300009762\|Ga0116130_1053126	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300010371\|Ga0134125_12976063	Not Available	514	Open in IMG/M
3300010371\|Ga0134125_12994835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300010379\|Ga0136449_100972339	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300010379\|Ga0136449_104214061	Polyangium → Polyangium aurulentum	533	Open in IMG/M
3300010396\|Ga0134126_11340947	Not Available	792	Open in IMG/M
3300010397\|Ga0134124_11803880	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300010397\|Ga0134124_12823205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300010398\|Ga0126383_13605697	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300010403\|Ga0134123_10295864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1433	Open in IMG/M
3300011269\|Ga0137392_10538366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300011270\|Ga0137391_10738903	Not Available	815	Open in IMG/M
3300012198\|Ga0137364_10849218	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300012361\|Ga0137360_10203065	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300012924\|Ga0137413_10100474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1802	Open in IMG/M
3300012924\|Ga0137413_10124040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1650	Open in IMG/M
3300014151\|Ga0181539_1169171	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300014152\|Ga0181533_1344197	Polyangium → Polyangium aurulentum	533	Open in IMG/M
3300014156\|Ga0181518_10033141	All Organisms → cellular organisms → Bacteria → Proteobacteria	3309	Open in IMG/M
3300014167\|Ga0181528_10721829	Not Available	557	Open in IMG/M
3300014490\|Ga0182010_10279550	Not Available	892	Open in IMG/M
3300014493\|Ga0182016_10458242	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300014502\|Ga0182021_12521801	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300014657\|Ga0181522_10000654	All Organisms → cellular organisms → Bacteria	24308	Open in IMG/M
3300017925\|Ga0187856_1218344	Not Available	683	Open in IMG/M
3300017935\|Ga0187848_10004794	All Organisms → cellular organisms → Bacteria	9257	Open in IMG/M
3300017936\|Ga0187821_10122871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300017940\|Ga0187853_10490623	Not Available	537	Open in IMG/M
3300017943\|Ga0187819_10502868	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300017946\|Ga0187879_10508818	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrificans	668	Open in IMG/M
3300018002\|Ga0187868_1220896	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300018002\|Ga0187868_1226045	Not Available	640	Open in IMG/M
3300018005\|Ga0187878_1065753	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300018008\|Ga0187888_1083322	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300018008\|Ga0187888_1220570	Not Available	746	Open in IMG/M
3300018009\|Ga0187884_10378476	Not Available	570	Open in IMG/M
3300018014\|Ga0187860_1306959	Not Available	613	Open in IMG/M
3300018014\|Ga0187860_1347404	Not Available	565	Open in IMG/M
3300018021\|Ga0187882_1411541	Not Available	513	Open in IMG/M
3300018022\|Ga0187864_10139735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1209	Open in IMG/M
3300018038\|Ga0187855_10880310	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300018040\|Ga0187862_10294611	Not Available	1027	Open in IMG/M
3300018040\|Ga0187862_10482122	Not Available	748	Open in IMG/M
3300018057\|Ga0187858_10055724	All Organisms → cellular organisms → Bacteria	2818	Open in IMG/M
3300019787\|Ga0182031_1152675	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300019885\|Ga0193747_1087933	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300020002\|Ga0193730_1040750	All Organisms → cellular organisms → Bacteria → Acidobacteria	1346	Open in IMG/M
3300020006\|Ga0193735_1151915	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300020078\|Ga0206352_10043921	Not Available	1154	Open in IMG/M
3300023088\|Ga0224555_1166725	Not Available	626	Open in IMG/M
3300025419\|Ga0208036_1036291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300025444\|Ga0208189_1010833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2207	Open in IMG/M
3300025496\|Ga0208191_1127860	Not Available	505	Open in IMG/M
3300025498\|Ga0208819_1052386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300025664\|Ga0208849_1020127	All Organisms → cellular organisms → Bacteria → Acidobacteria	2228	Open in IMG/M
3300025739\|Ga0209745_1001772	All Organisms → cellular organisms → Bacteria	12634	Open in IMG/M
3300025739\|Ga0209745_1030899	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300025750\|Ga0209747_1192029	Not Available	624	Open in IMG/M
3300025918\|Ga0207662_10685824	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300025941\|Ga0207711_10041319	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3926	Open in IMG/M
3300026304\|Ga0209240_1293087	Not Available	504	Open in IMG/M
3300026309\|Ga0209055_1042843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1990	Open in IMG/M
3300026318\|Ga0209471_1077225	All Organisms → cellular organisms → Bacteria → Acidobacteria	1477	Open in IMG/M
3300026325\|Ga0209152_10172598	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300026502\|Ga0255350_1126579	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300026523\|Ga0209808_1254320	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300026540\|Ga0209376_1365720	Not Available	542	Open in IMG/M
3300027692\|Ga0209530_1011792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2708	Open in IMG/M
3300027911\|Ga0209698_10294097	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300028765\|Ga0302198_10106646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1518	Open in IMG/M
3300029910\|Ga0311369_11283053	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300029922\|Ga0311363_10441617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1357	Open in IMG/M
3300029955\|Ga0311342_11267994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter marinus	526	Open in IMG/M
3300029986\|Ga0302188_10274314	Not Available	700	Open in IMG/M
3300029992\|Ga0302276_10155263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1114	Open in IMG/M
3300030011\|Ga0302270_10728359	Not Available	500	Open in IMG/M
3300030041\|Ga0302274_10390083	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300030503\|Ga0311370_11305643	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300030507\|Ga0302192_10202855	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300030741\|Ga0265459_14009078	Not Available	517	Open in IMG/M
3300031057\|Ga0170834_105738807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300031344\|Ga0265316_10530970	Not Available	839	Open in IMG/M
3300031708\|Ga0310686_109810245	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300032180\|Ga0307471_100482656	All Organisms → cellular organisms → Bacteria → Acidobacteria	1384	Open in IMG/M
3300033134\|Ga0335073_10048012	All Organisms → cellular organisms → Bacteria	5726	Open in IMG/M
3300033433\|Ga0326726_10310362	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1481	Open in IMG/M
3300033818\|Ga0334804_066342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	998	Open in IMG/M
3300033824\|Ga0334840_021564	Not Available	2100	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.73%
Host-Associated	Host-Associated	4.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.10%
Aquatic	Environmental → Aquatic	31.62%
Plants	Host-Associated → Plants	4.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.28%
Freshwater	Environmental → Aquatic → Freshwater	28.21%
Peat	Environmental → Terrestrial → Peat	12.82%
Sediment	Environmental → Aquatic → Sediment	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%
Marine	Environmental → Aquatic → Marine	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.82%
Loam	Environmental → Terrestrial → Soil → Loam	8.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	19.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.97%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.98%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.27%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.71%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.71%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.71%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.85%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00180920	2124908043	Soil	MRNHMVRRPRGDNEAQFDELGTDPGQVGSDSAGQSGDSQRLSAIEDATEESVEELADTDQAWEASAIDG
JGI12635J15846_101236682	3300001593	Forest Soil	VKRRLRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQVADAADESVEDLA
JGI12635J15846_101499691	3300001593	Forest Soil	MLKRPHGDEQAQLDELGDDPGQVGPDSAGQSGDTQSLSSIADAADESVEELADGDQAL
JGI12053J15887_105805471	3300001661	Forest Soil	MVNKPRGDEQARPDELGNDPGQVGPESAGQSGDSQRLSSIADASDESVQELAEDD
JGIcombinedJ26739_1003311851	3300002245	Forest Soil	MVNRPRGDEQARPDELGNDPGQVGPESAGQSGDNQSLSTIADAADESVQELADDDQALE
Ga0055467_102785182	3300003996	Natural And Restored Wetlands	LSHRHNDAQPNEIDSDHGQVGPDSAGQSGDTQGLSPIADAADASV
Ga0066688_100365701	3300005178	Soil	MAERRNRDNDNEARLDELGNDPGQVGSDSAGQSGDAQGLSDIVEANEESVEELADTDQA
Ga0066685_110619451	3300005180	Soil	MRKPQGDNEARPDELGNDSGQVGPNSAGQSGDPQGLSPVEDASEESVEELADA
Ga0070713_1004774593	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VAKHESRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADATGESVEELADTD
Ga0066686_103139702	3300005446	Soil	MRKPQGDNEARPDELGNDSGQVGPNSAGQSGDPQGLSPVEDASEESV
Ga0066687_102143642	3300005454	Soil	MAERRNRDNDNEARLDELGNDPGQVGSDSAGQSGDAQGLSDIVEANEESVEELADTDQAF
Ga0070697_1001277023	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAKQRNRDNEARLDELGTDPGQVGSDSAGQSGDAQGLSGIEEANEES
Ga0070697_1010935572	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAERRNRDNEARLDELGTDPGQVGSDSAGQSGDAQGLSGVEEANEESVEELADTDQAFEA
Ga0070697_1013892032	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAKQRNRDNDDNEARLDELGTDPGQVGSDSAGQSGDAQGLSDIEEANEESVE
Ga0066661_104575251	3300005554	Soil	MDRTDNQARLDELGNDPSQVGSRSAGQSGDSQQLSSSRDAAEESVEELADTDQ
Ga0066705_104046741	3300005569	Soil	MKKDPRESNEARPDDLGNDPGQVGPESAGQSGDPQQLSHVEDASEESVEELSDT
Ga0068852_1015715642	3300005616	Corn Rhizosphere	VAKHESRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADATGESVEELADTDQA
Ga0066656_104327331	3300006034	Soil	MPRTKDNEAYPDELGTDPGQVGPQSAGQSGDPQQLSRMPEAAEASVEELADTDQAYESAI
Ga0075029_1001578521	3300006052	Watersheds	VAKRKSRDNEAQFDELGSDPGQVGSDSAGQSGDAQGLSEIEESAEESVEELSDTDQAY
Ga0075017_1001415441	3300006059	Watersheds	MVKRPRGDEQAQLDELGNDPGQVGPESAGQSGDSQHLSSIADAADASVQELADSDQAT
Ga0097621_1019663822	3300006237	Miscanthus Rhizosphere	MSKRKRNEARPDELGNTPAQVGLDSAGQSGDNQELSDVEDAVDQSVDDL
Ga0066665_101655361	3300006796	Soil	MRKPQGDNEARPDELGNDSGQVGPNSAGQSGDPQGLSPVEDASEESVEE
Ga0066793_104138501	3300009029	Prmafrost Soil	MEAFMTSKSRDRDRDNEAQLDELGDDPGQVGSDSAGQSGDSQGLSDIAESAAESVE
Ga0099827_114535972	3300009090	Vadose Zone Soil	MAERRNRDNEARMDELGTDPGQVGSDSAGQSGDAQGLSDIEEANEESVE
Ga0105237_115272842	3300009545	Corn Rhizosphere	MSKRKRNEARPDELGNTPAQVGLDSAGQSGDNQELSDVEDAVDQSVDDLVETGQDFEANVAQ
Ga0116127_11275492	3300009618	Peatland	MEVFIVTRFLRDNEAQLDELGCDPGQLGPDTAGQSGDTQGLSDHLDAADESVEELADTYQAY
Ga0116126_12474781	3300009640	Peatland	MEAFMTPKSRDRDRDNEAQLDELGDDPGHVGSDSAGQSGDSQGLSDIAESAAGSVEELADTDQAYEAE
Ga0116130_10531261	3300009762	Peatland	MEAFMTPKSRDRDRDNEAQLDELGDDPGQVGSDSAGQSGDSQGLADIAESAAESV
Ga0134125_129760632	3300010371	Terrestrial Soil	VAKHESRDNEAQPAELGRDPGQIGTDSAGQSGDAQGLSQIADAAGESVEELADSEQAYESE*
Ga0134125_129948352	3300010371	Terrestrial Soil	MAKRTGDEARLDELGKDPGQVGTDSAGQSGDTQGLSSLADASEESVEELV
Ga0136449_1009723393	3300010379	Peatlands Soil	MAKHNTRKDEAQIDELGSDLGQAGSDSAGQSGDVQGLSQVADVDEESVG
Ga0136449_1042140611	3300010379	Peatlands Soil	MEVFMVKRFLRDNEARFGELGSDPGQVGSDSAGQSGDTQGLSQDPDAADESAEELADT
Ga0134126_113409471	3300010396	Terrestrial Soil	VAKHESRDNEAQPAELGRDPGQIGTDSAGQSGDAQGLSQIADAAGESVEELADS
Ga0134124_118038801	3300010397	Terrestrial Soil	MVRRARGDEQAQLDELGNDPGQVGPDSAGQSGDTQDLSPEEDVADESVEELAETDQALEA
Ga0134124_128232052	3300010397	Terrestrial Soil	MRRDDRNDNEARLDDLGTDPGQVGPDSAGQSGDPQQLSPDAEASEESVEELADT
Ga0126383_136056971	3300010398	Tropical Forest Soil	MVNRRRGGEKAQADELGNDPGQVGPDSAGQYGDPQRLSPAEEATNESVEQLAEEEQSLEAAAVEGI
Ga0134123_102958641	3300010403	Terrestrial Soil	MKMVRKPRGDNEARPDELGNDPGQVGTDSAGQSGDAQRLSDIEDASEESVEELAETDQAW
Ga0137392_105383661	3300011269	Vadose Zone Soil	MDRTDNQARLDELGNDPSQVGPRSAGQSGDSQQLSSSRDAAEESVEELAD
Ga0137391_107389032	3300011270	Vadose Zone Soil	MARSVRDNEAQLDEFGNDPGQVGPESAGQSGDPQGLSPIEEASEESVEELAD
Ga0137364_108492182	3300012198	Vadose Zone Soil	MAKRRNRDNDDNEARLDELGTDPGQVGSDSGGQSGDAQGLSDIEEANEESVE
Ga0137360_102030653	3300012361	Vadose Zone Soil	MAREKTKEADLDELGSDPAQVGPRSAGRSGDAQQLAEIEDATEESIEELNDT
Ga0137413_101004746	3300012924	Vadose Zone Soil	MAKRPRGDEQARPDELGNDPGQVGPTSAGQSGDPQDLSSIEDASNESVQELADS
Ga0137413_101240401	3300012924	Vadose Zone Soil	VKRPRGNEQAQLDELGNNPGQVGPGSAGQSGDPQDLSPVADSSNESVQE
Ga0181539_11691711	3300014151	Bog	VVKSRSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAAGESVEELADTDQAYEAEA
Ga0181533_13441971	3300014152	Bog	MEVFMMKRFLRDNETQLDELGSDPGQVGSDSAGQSGDTQGLSQDADSSEETVEELADTDQ
Ga0181518_100331411	3300014156	Bog	VVKSRSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAADES
Ga0181528_107218291	3300014167	Bog	MLNRPRGDEEAQADELGSDPGQVGPESGGQSGDNQQLSAIADAADESVQELADSDQAL
Ga0182010_102795501	3300014490	Fen	MTRHLPENDARRDEPDLHSGQSGPDSGGQSGDTQGVSQAVDAAEESVEELAGAGRTTRRRS*
Ga0182016_104582422	3300014493	Bog	MKRPLQGYEAQLDELGTDPGQVGPDSGGQSGDTQGLSREADAADESVEELA
Ga0182021_125218011	3300014502	Fen	VAKLRSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAAGESVEELDDTDQAYEAEAVG
Ga0181522_100006546	3300014657	Bog	MVKRPRGDEQAQFDELGGDPGQVGPDSAGQSGETESLSAIADVADESVEELADSDQALEAGIVK*
Ga0187856_12183441	3300017925	Peatland	MVKRFLRDNEAHFDELGSDPGQVGSDSSGQSGDTQGLSQDADSSEETVEELADTDQAYEA
Ga0187848_1000479413	3300017935	Peatland	VAKRKSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAADESVE
Ga0187821_101228712	3300017936	Freshwater Sediment	MATRKDNEARPDELGNDPAQVGADSAGQSGDAQGLSDIEDANEESVEELAETDQ
Ga0187853_104906231	3300017940	Peatland	MVKRSLRDNEAQFDELGSDPGQVDSDSAGQSGDAQGLSQDADSSEETVEELAESDQAYEAGI
Ga0187819_105028682	3300017943	Freshwater Sediment	MNRPRGDEEAQPDELGSDPGQVGPDSAGQSGDAQQLSSIADATDESVEELADGDQ
Ga0187879_105088181	3300017946	Peatland	MTPKSRDRDRGNEAQLDELGNDPGQVGSDGAGQSGDSQGLSDIAESAAESVEEL
Ga0187868_12208962	3300018002	Peatland	VAKRKSRNRESRNNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQVADA
Ga0187868_12260452	3300018002	Peatland	MSTRSLQDNEAQFDELGSDPGHVGSDSAGQSGDTQGLSQDPDAADESVEELADTD
Ga0187878_10657533	3300018005	Peatland	VAKRKSRNRESRNNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQVADAADESIEELADTD
Ga0187888_10833223	3300018008	Peatland	MVKPRSRDNEAQLDGLGSDPGQVGSDSAGQSGDTQGLSQIADAADESVEELA
Ga0187888_12205701	3300018008	Peatland	MVKRFLRDNEAQFDELGSDPGQVGSDSAGQSGDTQGLSQDADSSEETVEELADT
Ga0187884_103784761	3300018009	Peatland	VVKRFLRDNEAHFNELRSDPGQVGSDSAGQSGDTQGLSQDADSSEETVEELA
Ga0187860_13069591	3300018014	Peatland	VVKRFLRDNEAHFNELRSDPGQVGSDSAGQSGDTQGLSQDADSSEETVEEL
Ga0187860_13474042	3300018014	Peatland	MVTRFLRDNEGQLDELGSVPGQVGPDSAGQSGGTQGLSQDLDAADESVEELADTDQ
Ga0187882_14115412	3300018021	Peatland	MVTRFLRDNEGQLDELGSVPGQVGPDSAGQSGGTQGLSQDLDAADESVEDLADTYQAFEAGIGKGV
Ga0187864_101397352	3300018022	Peatland	MVKPRSRDNEAQLDGLGSDPGQVGSDSAGQSGDTQGLSQIADAADESVEELADTDQ
Ga0187855_108803102	3300018038	Peatland	MAKRRSQDNEAQLDELGSDPGQVGPDSAGQSGDTQGLSQEADAAEESVEEL
Ga0187862_102946112	3300018040	Peatland	MSTRSLRDNEAQFDELGSDPGQVGSDSAGQSGDTQGLSQDPDAADESAEELADTDQA
Ga0187862_104821222	3300018040	Peatland	VAKRKSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAADESVEELTDTEQAY
Ga0187858_100557241	3300018057	Peatland	MTPKSRDRDRGNEAQLDELGNDPGQVGSDGAGQSGDSQGLSDIAESAAES
Ga0182031_11526752	3300019787	Bog	VVKSRSRDNEAQLDELGSDPGQVGSDSAGQAGDTQGLSQIADAADESVEELADTESI
Ga0193747_10879331	3300019885	Soil	MAKPRNRDNDDNEARLDELGTDPGQVGSDSAGQSGDAQGLSDIEEANEESVE
Ga0193730_10407502	3300020002	Soil	MAKRRNRDNDDNEARPDELGTDPGQVGSDSAGQSGDAQGLSDIEEANEESVEELAD
Ga0193735_11519152	3300020006	Soil	MAERQNRDNEARMDELGTDPGQVGSDSAGQSGDAQGLSGIEEANEESVEE
Ga0206352_100439212	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	AGGSVAKHESRDNEAQPDELGRDPGQIGTDSAGQSGDAQGLSQIADAAGESVEELADSEQAYESE
Ga0224555_11667252	3300023088	Soil	VPKRNSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIVDSADESVEELADTEQ
Ga0208036_10362912	3300025419	Peatland	VAKRESRDNEAQVDELGSDPGQVGSDSAGQSGDTQGLSQVADAADESVEEL
Ga0208189_10108334	3300025444	Peatland	MVKRFLRDNEAQFDELGSDPGQVGSDSAGQSGDTQGLSQDADSSEETVEELADTDQA
Ga0208191_11278602	3300025496	Peatland	MVTRFLRDNEGQLDELGSVPGQVGPDSAGQSGGTQGLSQDLDAADESVEELADTDQAYEAGIVKAV
Ga0208819_10523862	3300025498	Peatland	VAKRESRDNEAQVDELGSDPGQVGSDSAGQSGDTQGLSQVADAADESVEELADTDQAY
Ga0208188_10671902	3300025507	Peatland	VAKRESRDNEAQVDELGSDPGQVGSDSAGQSGDTQGLSQVADAADE
Ga0208849_10201271	3300025664	Arctic Peat Soil	MARQGNQARLDELGKDPGQVGPESAGQSGDTQGLSNVEDANDESVDE
Ga0209745_100177214	3300025739	Arctic Peat Soil	MTRHLPENEAHLDEPGEQSGQGGPDSGGQSGDTQGLSQTADAAEETVEEL
Ga0209745_10308992	3300025739	Arctic Peat Soil	MTRHLPENEAHLDEPGDQSGQGGPDSGGQSGDTQGLSQTADAAEETVEEL
Ga0209747_11920292	3300025750	Arctic Peat Soil	MTRHLPENEAHLDEPGEQPGQGGPDSGGQSGDTQGLSQTADAAEETVEELA
Ga0207662_106858241	3300025918	Switchgrass Rhizosphere	MVRKPRGDNEARPDELGNDPGQVGTDSAGQSGDAQRLSDIEDASEESVEELAETD
Ga0207711_100413195	3300025941	Switchgrass Rhizosphere	MVRKPRGDNEARPGELGNDPGQVGTDSAGQSGDAQRLSDIEDASEESVEELAETDQAWEA
Ga0209240_12930872	3300026304	Grasslands Soil	MAREKRKEADLDELGSDPAQVGPRSAGRSGDAQQLAEIEDATEESIEELNDTDQAL
Ga0209055_10428434	3300026309	Soil	MPRTNDNEAYPDELGTDPGQVGPESAGQSGDPQQLSRVPEAAEASVEELADTDQAYESA
Ga0209471_10772252	3300026318	Soil	MAERRNRDNEARMDELGTDPGQVGSDSAGQSGDAQGLSDIEEANEE
Ga0209152_101725981	3300026325	Soil	MAERRNRDNEARMDELGTDPGQVGSDSAGQSGDAQGLSDIEEANEESVEELADTDQAF
Ga0255350_11265791	3300026502	Soil	VTRRSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAADESV
Ga0209808_12543202	3300026523	Soil	MDRTDNQARLDELGNDPSQVGPRSAGQSGDSQQLSSSRDAAEESVEELADTDQA
Ga0209376_13657201	3300026540	Soil	MRKPQGDNEARPDELGNDSGQVGPNSAGQSGDPQGLSPVEDASEESVEELADADQAL
Ga0209530_10117921	3300027692	Forest Soil	VKRRLRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQVADAADESVEDLATTDQAYETE
Ga0209698_102940971	3300027911	Watersheds	VAKRKSRDNEAQFDELGSDPGQVGSDSAGQSGDAQGLSEIEESAEESVEELSD
Ga0302198_101066461	3300028765	Bog	MVNRPRGDEQAQADELGNDPGQVGPDSAGQSGDSQQLSSVADAADESVQELADSDQALEA
Ga0311369_112830532	3300029910	Palsa	MMKRPRGDDEAQLDELGNDPGQVGPDSAGQSGDTQSLSSIADAADESVEELADGDQALEA
Ga0311363_104416171	3300029922	Fen	MKRPLQGYEAQLDELGTDPGQVGPDSGGQSGDTQGLSREADAADESVEELADTDQ
Ga0311342_112679942	3300029955	Bog	MKRPLQGYEAQLDELGTDPGQVGPDSGGQSGDTQGLSREADAADESVEELADTDQSYEA
Ga0302188_102743142	3300029986	Bog	VAKLRSLDNEARLDELGSDPGQVGSDSAGQSGDTQGLSQIADAADESVEELADTDQA
Ga0302276_101552633	3300029992	Bog	MVNRPRGDEQAQADELGNDPGQVGPDSAGQSGDSQQLSSVADAADESVQELADSD
Ga0302270_107283591	3300030011	Bog	VAKLRSLDNEARLDELGSDPGQVGSDSAGQSGDTQGLSEIADAADESVEELADT
Ga0302274_103900831	3300030041	Bog	MKRPLQGYEAQLDELGTDPGQVGPDSGGQSGDTQGLSREADAADESVE
Ga0311370_113056432	3300030503	Palsa	MVKPRSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAADESVE
Ga0302192_102028552	3300030507	Bog	MVKPRSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAADESVEELADTD
Ga0265459_140090782	3300030741	Soil	VAKRKSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAAAESVEE
Ga0170834_1057388072	3300031057	Forest Soil	MVKRPRGDEQAQRDELGSDPGQVGPDSAGQSGDSQRLSSIADAADESVQELADGDQALEA
Ga0265316_105309701	3300031344	Rhizosphere	VAKHKSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAAGESVEELDDTDQAYE
Ga0310686_1098102453	3300031708	Soil	VLKRRSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAADESVEELADTDQ
Ga0326597_117262011	3300031965	Soil	MMRSRDNEAQMDELGNDPAQVGPDGGGQSGDTQRLSEIADAADDGV
Ga0307471_1004826561	3300032180	Hardwood Forest Soil	MAKQRNRDNEARLDELGTDPGQVGSDSAGQSGDAQGLSGVEEANEESVEELAD
Ga0335073_100480121	3300033134	Soil	MPKNSDPTRRKDRTPDNEAQPDELGNDPAQVGPDSAGQSGDLQGLSEIEDEDSESVEELADD
Ga0326726_103103622	3300033433	Peat Soil	MVNKPLGDEQAQLDELGNDPGQVGPDSAGQSGDPQRLSSIEDVANESVQELAST
Ga0334804_066342_3_158	3300033818	Soil	MTRRSRDNEAQLDELGSDPGQVGSDSAGQSGDTQGLSQIADAADESVEELAD
Ga0334840_021564_1916_2098	3300033824	Soil	LKITLGRVSVAKLRSLDNEARLDELGSDPGQVGSDSAGQSGDTQGLSEIADAADESVEEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077408

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences