Metagenome / Metatranscriptome Family F077376

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077376
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	136 residues
Representative Sequence	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRADERMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA
Number of Associated Samples	99
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.82 %
% of genes near scaffold ends (potentially truncated)	23.08 %
% of genes from short scaffolds (< 2000 bps)	61.54 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.265 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root (6.838 % of family members)
Environment Ontology (ENVO)	Unclassified (35.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.265 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 13.33% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01244	Peptidase_M19	13.68
PF00027	cNMP_binding	10.26
PF00498	FHA	6.84
PF03331	LpxC	5.13
PF02321	OEP	5.13
PF00854	PTR2	2.56
PF01266	DAO	2.56
PF12697	Abhydrolase_6	1.71
PF00069	Pkinase	1.71
PF08448	PAS_4	1.71
PF09905	VF530	1.71
PF00815	Histidinol_dh	0.85
PF03537	Glyco_hydro_114	0.85
PF04828	GFA	0.85
PF11356	T2SSC	0.85
PF00528	BPD_transp_1	0.85
PF02142	MGS	0.85
PF00230	MIP	0.85
PF03737	RraA-like	0.85
PF08818	DUF1801	0.85
PF03054	tRNA_Me_trans	0.85
PF00887	ACBP	0.85
PF12695	Abhydrolase_5	0.85
PF08281	Sigma70_r4_2	0.85
PF00873	ACR_tran	0.85
PF00795	CN_hydrolase	0.85
PF13458	Peripla_BP_6	0.85
PF14498	Glyco_hyd_65N_2	0.85
PF08238	Sel1	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	13.68
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	10.26
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.84
COG0774	UDP-3-O-acyl-N-acetylglucosamine deacetylase	Cell wall/membrane/envelope biogenesis [M]	5.13
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	2.56
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	0.85
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.85
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.85
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.85
COG2342	Endo alpha-1,4 polygalactosaminidase, GH114 family (was erroneously annotated as Cys-tRNA synthetase)	Carbohydrate transport and metabolism [G]	0.85
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.85
COG3868	Alpha-1,4 polygalactosaminidase, glycosyl hydrolase family GH114	Carbohydrate transport and metabolism [G]	0.85
COG4281	Acyl-CoA-binding protein	Lipid transport and metabolism [I]	0.85
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.85
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.12 %
Unclassified	root	N/A	41.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.12 %
Unclassified	root	N/A	41.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.26 %
Unclassified	root	N/A	41.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.85 %
Unclassified	root	N/A	41.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.71 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	28.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	28.21 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.85 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.85 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.85 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.85 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.85 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.85 %
unclassified Methylococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae	0.85 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Pseudomonas syringae group genomosp. 1	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1	0.85 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Malpighiales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Euphorbiaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Acalyphoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae → Acalyphoideae	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Acalypheae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae → Acalyphoideae → Acalypheae	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Ricinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae → Acalyphoideae → Acalypheae → Ricinus	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.27 %
Ricinus communis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae → Acalyphoideae → Acalypheae → Ricinus → Ricinus communis	0.85 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.85 %
Methylococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Alphaproteobacteria bacterium ADurb.Bin100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002705\|JGI25156J39149_1000041	All Organisms → cellular organisms → Bacteria → Proteobacteria	106358	Open in IMG/M
3300003320\|rootH2_10008063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8455	Open in IMG/M
3300003323\|rootH1_10019186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4816	Open in IMG/M
3300003323\|rootH1_10256323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2120	Open in IMG/M
3300003752\|Ga0055539_1000154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	66426	Open in IMG/M
3300003761\|Ga0055535_1005331	All Organisms → cellular organisms → Bacteria → Proteobacteria	2851	Open in IMG/M
3300005329\|Ga0070683_100404402	All Organisms → cellular organisms → Bacteria → Proteobacteria	1302	Open in IMG/M
3300005330\|Ga0070690_100011181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5245	Open in IMG/M
3300005339\|Ga0070660_100222639	All Organisms → cellular organisms → Bacteria → Proteobacteria	1534	Open in IMG/M
3300005354\|Ga0070675_100836097	Not Available	842	Open in IMG/M
3300005356\|Ga0070674_101620968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300005365\|Ga0070688_100492915	Not Available	923	Open in IMG/M
3300005366\|Ga0070659_102076741	Not Available	511	Open in IMG/M
3300005459\|Ga0068867_101110694	Not Available	722	Open in IMG/M
3300005466\|Ga0070685_11472432	Not Available	524	Open in IMG/M
3300005513\|Ga0077120_1004152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	17367	Open in IMG/M
3300005513\|Ga0077120_1004310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	17005	Open in IMG/M
3300005519\|Ga0077119_10059226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2488	Open in IMG/M
3300005519\|Ga0077119_10334233	Not Available	556	Open in IMG/M
3300005530\|Ga0070679_101931623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	539	Open in IMG/M
3300005539\|Ga0068853_100870567	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300005563\|Ga0068855_100041547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5450	Open in IMG/M
3300005563\|Ga0068855_100266911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1905	Open in IMG/M
3300005564\|Ga0070664_101363158	Not Available	670	Open in IMG/M
3300005577\|Ga0068857_100332344	All Organisms → cellular organisms → Bacteria → Proteobacteria	1405	Open in IMG/M
3300005616\|Ga0068852_100163809	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300005650\|Ga0075038_11228257	Not Available	557	Open in IMG/M
3300005650\|Ga0075038_11266689	Not Available	520	Open in IMG/M
3300005650\|Ga0075038_11444780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1481	Open in IMG/M
3300006353\|Ga0075370_10004044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7050	Open in IMG/M
3300006881\|Ga0068865_100461560	Not Available	1052	Open in IMG/M
3300009093\|Ga0105240_10018314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9413	Open in IMG/M
3300009093\|Ga0105240_12279741	Not Available	561	Open in IMG/M
3300009098\|Ga0105245_10800486	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300009148\|Ga0105243_10473012	All Organisms → cellular organisms → Bacteria → Proteobacteria	1181	Open in IMG/M
3300009545\|Ga0105237_10324627	Not Available	1543	Open in IMG/M
3300009660\|Ga0105854_1162295	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300009686\|Ga0123338_10287086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	722	Open in IMG/M
3300010331\|Ga0123336_10365782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	743	Open in IMG/M
3300010397\|Ga0134124_11488877	Not Available	705	Open in IMG/M
3300012469\|Ga0150984_103059909	Not Available	559	Open in IMG/M
3300012784\|Ga0157523_152264	Not Available	1245	Open in IMG/M
3300013006\|Ga0164294_10369521	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300014497\|Ga0182008_10990601	Not Available	500	Open in IMG/M
3300015262\|Ga0182007_10122917	Not Available	869	Open in IMG/M
3300015374\|Ga0132255_100925374	All Organisms → cellular organisms → Bacteria → Proteobacteria	1305	Open in IMG/M
3300021432\|Ga0210384_11409185	Not Available	602	Open in IMG/M
3300022561\|Ga0212090_10558699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	764	Open in IMG/M
3300022908\|Ga0247779_1044612	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae → Acalyphoideae → Acalypheae → Ricinus → Ricinus communis	1170	Open in IMG/M
3300025147\|Ga0209511_1305475	Not Available	550	Open in IMG/M
3300025226\|Ga0209674_100003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2196646	Open in IMG/M
3300025231\|Ga0207427_102503	All Organisms → cellular organisms → Bacteria → Proteobacteria	4880	Open in IMG/M
3300025242\|Ga0209258_100506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	37820	Open in IMG/M
3300025246\|Ga0209646_1000112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	153075	Open in IMG/M
3300025253\|Ga0209677_100987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	13741	Open in IMG/M
3300025256\|Ga0209759_1007063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3669	Open in IMG/M
3300025256\|Ga0209759_1054198	Not Available	599	Open in IMG/M
3300025907\|Ga0207645_10819960	Not Available	633	Open in IMG/M
3300025909\|Ga0207705_11517348	Not Available	507	Open in IMG/M
3300025911\|Ga0207654_10057594	All Organisms → cellular organisms → Bacteria → Proteobacteria	2259	Open in IMG/M
3300025913\|Ga0207695_10016137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8761	Open in IMG/M
3300025919\|Ga0207657_10163213	All Organisms → cellular organisms → Bacteria → Proteobacteria	1808	Open in IMG/M
3300025919\|Ga0207657_10441511	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300025921\|Ga0207652_11763141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	524	Open in IMG/M
3300025924\|Ga0207694_10026036	All Organisms → cellular organisms → Bacteria → Proteobacteria	4448	Open in IMG/M
3300025926\|Ga0207659_11015348	All Organisms → cellular organisms → Bacteria → Proteobacteria	714	Open in IMG/M
3300025927\|Ga0207687_10550662	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300025927\|Ga0207687_11250246	Not Available	638	Open in IMG/M
3300025932\|Ga0207690_11165374	Not Available	643	Open in IMG/M
3300025934\|Ga0207686_10787249	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300025935\|Ga0207709_10015956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4169	Open in IMG/M
3300025936\|Ga0207670_10847565	All Organisms → cellular organisms → Bacteria → Proteobacteria	763	Open in IMG/M
3300025937\|Ga0207669_10308558	All Organisms → cellular organisms → Bacteria → Proteobacteria	1206	Open in IMG/M
3300025938\|Ga0207704_10380455	Not Available	1108	Open in IMG/M
3300025942\|Ga0207689_10090326	All Organisms → cellular organisms → Bacteria → Proteobacteria	2517	Open in IMG/M
3300025949\|Ga0207667_10007567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	13032	Open in IMG/M
3300026089\|Ga0207648_11327841	Not Available	676	Open in IMG/M
3300026116\|Ga0207674_10234859	All Organisms → cellular organisms → Bacteria → Proteobacteria	1781	Open in IMG/M
3300026116\|Ga0207674_10363658	All Organisms → cellular organisms → Bacteria → Proteobacteria	1399	Open in IMG/M
3300026121\|Ga0207683_11839232	Not Available	554	Open in IMG/M
3300028783\|Ga0302279_10000449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	59738	Open in IMG/M
3300028813\|Ga0302157_10106220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1751	Open in IMG/M
3300029882\|Ga0311368_10035692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4672	Open in IMG/M
3300029896\|Ga0247044_1040063	Not Available	1093	Open in IMG/M
3300029945\|Ga0311330_10610617	Not Available	856	Open in IMG/M
3300029951\|Ga0311371_10100591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4603	Open in IMG/M
3300029951\|Ga0311371_10283265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2355	Open in IMG/M
3300030046\|Ga0302305_1139631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	926	Open in IMG/M
3300030520\|Ga0311372_10635301	Not Available	1513	Open in IMG/M
3300030687\|Ga0302309_10055601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin100	2226	Open in IMG/M
3300031027\|Ga0302308_10476129	Not Available	738	Open in IMG/M
3300031232\|Ga0302323_100934912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	960	Open in IMG/M
3300031640\|Ga0318555_10495990	Not Available	662	Open in IMG/M
3300031716\|Ga0310813_10411471	All Organisms → cellular organisms → Bacteria → Proteobacteria	1165	Open in IMG/M
3300031722\|Ga0311351_10521190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	903	Open in IMG/M
3300031835\|Ga0318517_10076416	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1444	Open in IMG/M
3300031894\|Ga0318522_10374486	Not Available	539	Open in IMG/M
3300031902\|Ga0302322_101028662	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300031918\|Ga0311367_10305313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium	1650	Open in IMG/M
3300031996\|Ga0308176_11616887	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300032261\|Ga0306920_101777845	Not Available	871	Open in IMG/M
3300033290\|Ga0318519_11036072	Not Available	510	Open in IMG/M
3300034820\|Ga0373959_0164061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.97%
Environmental	Environmental	41.03%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.97%
Terrestrial	Environmental → Terrestrial	35.04%
Aquatic	Environmental → Aquatic	5.98%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.93%
Soil	Environmental → Terrestrial → Soil	20.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.38%
Peat	Environmental → Terrestrial → Peat	13.68%
Roots	Host-Associated → Plants → Roots	12.82%
Freshwater	Environmental → Aquatic → Freshwater	5.98%
Rhizome	Host-Associated → Plants → Rhizome	5.98%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%
Peat Moss	Host-Associated → Plants → Peat Moss	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	10.26%
Endophytes	Host-Associated → Plants → Roots → Endophytes	6.84%
Loam	Environmental → Terrestrial → Soil → Loam	5.98%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	5.98%
Epiphytes	Host-Associated → Plants → Roots → Epiphytes	5.13%
Ice	Environmental → Aquatic → Freshwater → Ice	4.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.27%
Lake	Environmental → Aquatic → Freshwater → Lake	1.71%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.85%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.85%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.84%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	6.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.98%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	5.98%
Unclassified	Host-Associated → Plants → Roots → Epiphytes → Unclassified	5.13%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	3.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.84%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.98%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.98%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	5.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.98%
Arabidopsis Root	Host-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root	5.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.13%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.27%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	3.42%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	3.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.42%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.56%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.71%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.85%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002705	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS	Host-Associated	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003752	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2	Host-Associated	Open in IMG/M
3300003761	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005513	Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)	Host-Associated	Open in IMG/M
3300005519	Combined assembly of arab plate scrape CL_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009686	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - groundupSSSS metaG	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010331	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - ?SSSS metaG	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012784	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES001 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300025147	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - ?SSSS metaG (SPAdes)	Environmental	Open in IMG/M
3300025226	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025228	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025231	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025242	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025246	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes)	Host-Associated	Open in IMG/M
3300025253	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025256	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029896	Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-C3b	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030046	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25156J39149_100004119	3300002705	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRADERMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIADLGRRVTCTGQLRDFSFGARVRPLFARAA*
rootH1_100166963	3300003316	Sugarcane Root And Bulk Soil	MTTYVLSLMGDEEKAANATHWATFRKARLLSVSRNPRDRACARLAGRDSFVITGQGAIDPPDARHASLTRHPQALAALLVRTLDIQDGAGVVLAEFDSDEFAADVVAEIAALGREVTCPGRAANFAFSAAV*
rootH1_100641132	3300003316	Sugarcane Root And Bulk Soil	MTTYVLSLMGDEEKAANATHWATFRKARLLSVSRNPRDRAAARPPGRDGIVITGQGAVDPHHARHASLTRHPQALAALLVRTLDIQDGAGVVLADFDSDEFAADVVAEIAALGRQVTCSGRAANFAFSAVV*
rootH2_100080635	3300003320	Sugarcane Root And Bulk Soil	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRKGDQRTFDAGRDSIVIAAHGMGDHRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEDFAADVVARIAALGRHVTCTGQVRDFSFGARVRPLLARGVRS*
rootL2_100000174	3300003322	Sugarcane Root And Bulk Soil	MTTYVLSLMGDEEKAANATHWATFRKARLLSVSRNPRDRACARLAGRDSFVITGQGAIDPPDARHASLTRHPQALAALLVRTLDIQDGAGVVLADFDSDEFAADVVAEIAALGREVTCPGRAANFAFSAAV*
rootH1_100082458	3300003323	Sugarcane Root And Bulk Soil	MTTYVLSLMGDEEKAANATHWATFRKARLLSVSRNPRDRACARLAGRDSFVITGQGAIDPPDARHASLTRHPQALAALLVRTLDIQDGAGVVLADFDSDEFAADVVAEIAALGREVTCPGRAANFAFSAVV*
rootH1_100191866	3300003323	Sugarcane Root And Bulk Soil	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRQGDEGTSDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEDFAADVVARIAALGRHVTCTGQVRDFSFGARVRPLFARAA*
rootH1_102563231	3300003323	Sugarcane Root And Bulk Soil	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRKGEDRTADAGRDSIVIAEHGTGDHRATSGNPSTHDPAALAALLVRTLDIQDGTGVVLADFDDEDFAADVVARIAALGRRVTCTGRVRDFSFGARVRPLFARAA*
Ga0055539_100015458	3300003752	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWATFRKAKLLSVSRNPRDRASARLAGRDSIVITGQGPIDPPDARHASLTRHPQALAALLVRTLDIQDGAGVVLADFDSDEFAADVVAEIAALGREVTCSGRAANFAFSAVV*
Ga0055535_100005289	3300003761	Arabidopsis Root	MTTTYVLSLTGDEEKAANATHWATFRKAKLVSISRRTPEMPPAAAGKDSIVVTAHGELDPLDAERAAATRHPQALAALLVRTLDIQDGAGVVLADFDSEQFAADVVAEIAALGRDVVCPGRASNFAFGSRVGARAWRA*
Ga0055535_10053313	3300003761	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWARFRRAKLISVSRQADQRMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQLRDFSFGARVRPLFARAA*
Ga0070683_1004044022	3300005329	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRADERMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQLRDFSFGARVRPLFARAA*
Ga0070690_1000111814	3300005330	Switchgrass Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRKADQQTSDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLAARAA*
Ga0070660_1002226392	3300005339	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRADERMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQLRDFSFGARVRPLFARAA*
Ga0070675_1008360972	3300005354	Miscanthus Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERAAPAPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA*
Ga0070674_1016209681	3300005356	Miscanthus Rhizosphere	ANATHWARFRRAKMISVSRQGGERVAPGPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLAARAA*
Ga0070688_1004929152	3300005365	Switchgrass Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRQADQRVPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA*
Ga0070659_1020767411	3300005366	Corn Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRKGSERAAPEAGRDSIVIASHGAGDQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA*
Ga0068867_1011106941	3300005459	Miscanthus Rhizosphere	MTTYVLSLSGDEEKVANATHWARFRRAKMISVSRKGSERVAPETGRESIVIASHGAGDQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA*
Ga0070685_114724321	3300005466	Switchgrass Rhizosphere	AMTTYVLSLTGDEEKAANATHWARFRRAKMISVSRQADQRVPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA*
Ga0077120_10041525	3300005513	Arabidopsis Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKLISVSRKTRERLADGDGRDSIVITALGSADDHERSPRRRDDTHDPAALAALLVRTLDIQDGTGVVLADFDSEAFAADVVARIAALGRDVTCTGQVADFAFSTTVRAAARALLS*
Ga0077120_100431014	3300005513	Arabidopsis Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRKGSERAAPDAGRDSIVIAEHGAGDRRATSCNPATHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGNVRDFSFGTRVRPLFARAA*
Ga0077119_100592263	3300005519	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWARFRKAKLLSVSRKPVERPAADNAGRDSIVVLEQGSHHEPQHRPGTHDPQALAALLVRTLDIQDGTGVVLADFDNEDFAADVVARIAALGRAVTCTGRIADYAFGLSVRRRLSRS*
Ga0077119_103342332	3300005519	Arabidopsis Root	AMTTYVLSLTGDEEKAANATHWARFRRAKLISVSRRTGERIATDTGRDSIVVAAHGPARPRATDRAPFMHDPEALAALLVRTLDVQDGTGVVLADFDNEEFAADVVARIAALGREVTCTGRIADFAFGTRVRARAA*
Ga0070679_1019316232	3300005530	Corn Rhizosphere	QAANATHWARFRRAKLISVSRRTREATPAGDGLLITALGASGPCDDGGRSGTHDPEALAALLVRTLDIQDGTGVVLADFDSEEYAAAVVARIAALGRAVTCTGEVARFAFGARVWPRSSKS*
Ga0068853_1008705672	3300005539	Corn Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERVAPGPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRAFSFGARVRPLFARAA*
Ga0068855_1000415473	3300005563	Corn Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERVAPAPDRDSIVIAAHGAGERPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPRFARAA*
Ga0068855_1002669113	3300005563	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKLISVSRRTRERVADGDGRDSIVITALGTGDERAPRRRDDTHDPAALAALLVRTLDIQDGTGVVLADFASEEFAAAVVARIAALGRRVTWPGKTSRFAFGSVVRPRFSRL*
Ga0070664_1013631582	3300005564	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRADERMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA*
Ga0068857_1003323442	3300005577	Corn Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRRGSERAAPGPDRDSIVIAAHGAGERPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA*
Ga0068852_1001638093	3300005616	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRQADQRVPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQLRDFSFGARVRPLFARAA*
Ga0075038_112282571	3300005650	Permafrost Soil	RRNAMTTYVLSLTGDEEKAANATHWARFRRAKLISVSRRASERTLADMPGKDSVVIMAQGSTDRHESSRRPGPHDPAALAALLVRTLDIQDGMGVVLADFDNEEFAADVVARIAALGRAVTCTGQVANFAFSARVRARSPRS*
Ga0075038_112666891	3300005650	Permafrost Soil	MTTYVLSLTGDEEKAANATHWAKFRRAKLISISRTPGERKAVDTGRDSIVIAEHGSADPCETRRAPYTHDPQALAALLVRTLDIQDGMGVVLADFDNEEFAADVVARIAALGRDVTCTGRLASFAFSAGVRARFSQA*
Ga0075038_114447802	3300005650	Permafrost Soil	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRNPAETSAAATGRDSIVIAAHGPADRCETNRSASTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRAVTCTGKLSNFAFGARVRSRFALA*
Ga0075370_100040444	3300006353	Populus Endosphere	MTTYVLSLSGDEEKAANATHWAKFRKAKLLSVSRKPCDRAAAGRTQKDSIVILEQGSTRQHETPGRPGTHDPDALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRDVTCTGRIADYAFGMGVRGRSRS*
Ga0068865_1004615602	3300006881	Miscanthus Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRKGSERAAPDAGRDSIVIAGHGAGDQRATSCNPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRR
Ga0105240_100183145	3300009093	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRQADQRVPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARA*
Ga0105240_122797412	3300009093	Corn Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERVAPAPDRDSIVIAAHGAGERPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDDEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPRFARAA*
Ga0105245_108004862	3300009098	Miscanthus Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRKGSERVVPEAGRDSIVIASHGAGDQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA*
Ga0105243_104730122	3300009148	Miscanthus Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRKGSERAAPDAGRDSIVIAGHGAGDQRATSCNPATHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGNVRDFSFGARVRPLFARAA*
Ga0105237_103246272	3300009545	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRKADQQTSDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARA*
Ga0105854_11622951	3300009660	Permafrost Soil	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRNPAETSDAATGRDSIVIAAHGPADRCETNRSASTHDPAALAALLVRTLDIQDGTGVVLAYFDNEEFAADVVARIAALGRAVTCTGKLSNFAFGARVRSRFALA*
Ga0123338_102870861	3300009686	Glacier Valley	GDEEKAANATHGAKFRRAKLISVSRRTGEAAPAPAARKDSILITAQGRAGQCETNTRPGTHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVSRIAALGRAVTCTGQVANFAFSARVWARSSKS*
Ga0116227_100375873	3300009709	Host-Associated	MTTYVLSLTGDEEKAANATHWATFRKARLVSVSRKTPGLPPAAATTKDSIVITAHGAVDPLEAQRAAATRHPQALAALLVRTLDIQDGAGVVLADFDSDQFAADVVSEIAALGRDVICPGRASKFAFGLRVGSGPWRA*
Ga0123336_103657822	3300010331	Glacier Valley	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRTGEAAPAPAAGKDSILITAQGRAGQCETNTRPGTHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVSRIAALGRAVTCTGQVANFAFSARVWARSSKS*
Ga0134124_114888772	3300010397	Terrestrial Soil	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRKADQQTSDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQVGDFSFGARVRPLFARA*
Ga0126347_10315552	3300010867	Boreal Forest Soil	MTMYVLSLTGDEEKAANATHWATFRKARLVSISRNAREQSPADMTASDSIVITGHGCLDQPDSRRASVTRHPQALAALLVRTLDIQDGAGVVLADFDSEEFAADVVAQIAALGRDVKCAGRASSFAFSAGVRLRSLRA*
Ga0150984_1030599091	3300012469	Avena Fatua Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRRAGEPAAPQPGRDSIVIASHGAGDECATSSNPATHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQLRDFSFGTRVRPLFARAA*
Ga0157523_1522641	3300012784	Freshwater	MTTYVLSLTGDEEKAANATHWARFRKAKLISVARRAGERAAGQDSIVITEQGAHDANPSERSPYTRDAGALAALLVRTLDIQDGTGVVLADFDSDEFAEDVVARIAALGRAVTCTSRVSRFSFAASVLPRLARA*
Ga0164294_103695213	3300013006	Freshwater	MTTYVLSLTGDEEKAANATHWARFRKAKLISVSRRTGERSPGQDSIVITEQGANADAPGARDPFARDAAALAALLVRTLDIQNGTGVVLADFDSDEFADDVVARIAALGRAVTCTSRVARFSFAASVLPRLARA*
Ga0182008_109906012	3300014497	Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRKAKLISVSRKPAGRPAADSPARDSIVILERGSTEPCEPQCRPGTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGREV
Ga0182007_101229172	3300015262	Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRADERMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA*
Ga0132255_1009253742	3300015374	Arabidopsis Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERAAPSPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA*
Ga0210397_112788572	3300021403	Soil	MTTYVLSLTGDEEKAANATHWAHFRKAKLISISRGTSEQRATDATARDSIVITAHGAIEQRDTRHASVTRHPQALAALLVRTLDIQDGAGVVLADFDSDEFAADVVAQIAALGRAVKCPGRASKFAFSAAVRSRI
Ga0210384_1000039624	3300021432	Soil	MTTYVLSLTGDEEKAVNATHWATFRKARLVSISRRTPGMPPAAAAGKDSIVVTAHGEVDPLDAERAAATRHPQALAALLVRTLDIQDGAGVVLADFDSEQFAADVVAEIAALGRDVVCPGRASTFAFGSRVGSRSWRA
Ga0210384_114091851	3300021432	Soil	MTTYVLSLTGDEEKAANATHWARFRKAKLISVSRTPRERTPEEVAGRDGMVITAHGPVDPPGSRHASAARDPAALAALLVRTLDIQNGAGVVLADFDSEEFAADVVARIAALGRDVTCPGYAASFAFGTSVRARTSRS
Ga0212090_105586991	3300022561	Glacier Valley	KNAMTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRTGEAAPAPAAGKDSILITAQGRAGQCETNTRPGTHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVSRIAALGRAVTCTGQVANFAFSARVWARSSKS
Ga0247779_10446122	3300022908	Plant Litter	MTTYVLSLTGDEEQAANATHWARFRRAKLISVSRRPGAREPADTTERDGLVIAAHGLAGRVDAPHATGTRDPAALAALLVRTLDIQDGTGVVLADFDNEEFAAAVVARIAALGRRVTCTGQVAKFAFVSRVWGRSSRA
Ga0209511_13054751	3300025147	Glacier Valley	LSLTGDEEKAANATHWAKFRRAKLISVSRRTGEAAPAPAAGKDSILITAQGRAGQCETNTRPGTHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVSRIAALGRAVTCTGQVANFAFSARVWARSSKS
Ga0209674_100003688	3300025226	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWATFRKAKLLSVSRNPRDRASARLAGRDSIVITGQGPIDPPDARHASLTRHPQALAALLVRTLDIQDGAGVVLADFDSDEFAADVVAEIAALGREVTCSGRAANFAFSAVV
Ga0209672_1041041	3300025228	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWATFRKAKLVSISRRTPEMPPAAAGKDSIVVTAHGELDPLDAERAAATRHPQALAALLVRTLDIQDGAGVVLADFDSEQFAADVVAEIAALGRDVVCPGRASNFAFGSRVGARAWRA
Ga0207427_1025034	3300025231	Arabidopsis Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRKGSERAAPDAGRDSIVIAEHGAGDRRATSCNPATHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGNVRDFSFGTRVRPLFARAA
Ga0209258_100074197	3300025242	Arabidopsis Root	MTTTYVLSLTGDEEKAANATHWATFRKAKLVSISRRTPEMPPAAAGKDSIVVTAHGELDPLDAERAAATRHPQALAALLVRTLDIQDGAGVVLADFDSEQFAADVVAEIAALGRDVVCPGRASNFAFGSRVGARAWRA
Ga0209258_10050624	3300025242	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWARFRRAKLISVSRQADQRMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQLRDFSFGARVRPLFARAA
Ga0209646_100011219	3300025246	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRADERMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIADLGRRVTCTGQLRDFSFGARVRPLFARAA
Ga0209677_1009877	3300025253	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWARFRRAKLISVSRKTRERLADGDGRDSIVITALGSADDHERSPRRRDDTHDPAALAALLVRTLDIQDGTGVVLADFDSEAFAADVVARIAALGRDVTCTGQVADFAFSTTVRAAARALLS
Ga0209759_10070634	3300025256	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWARFRKAKLLSVSRKPVERPAADNAGRDSIVVLEQGSHHEPQHRPGTHDPQALAALLVRTLDIQDGTGVVLADFDNEDFAADVVARIAALGRAVTCTGRIADYAFGLSVRRRLSRS
Ga0209759_10541981	3300025256	Arabidopsis Root	MTTYVLSLTGDEEKAANATHWARFRRAKLISVSRRTGERIATDTGRDSIVVAAHGPARPRATDRAPFMHDPEALAALLVRTLDVQDGTGVVLADFDNEEFAADVVARIAALGREVTCTGRIADFAFGTRVRARAA
Ga0207645_108199601	3300025907	Miscanthus Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRKGSERVAPEAGRDSIVIASHGARDQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQDVRLVEVA
Ga0207705_115173481	3300025909	Corn Rhizosphere	VLSLTGDEEKAANATHWARFRRAKLISVSRKTRERLADGDGRDSIVITALGSADDHGRPPRRRDHTHDPAALAALLVRTLDIQDGTGVVLADFDSEAFAADVVARIAALGRDVTCTGQVADFAFSTTVRAAARALLS
Ga0207654_100575942	3300025911	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRQADQRVPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQLRDFSFGARVRPLFARAA
Ga0207695_100161373	3300025913	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRQADQRVPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARA
Ga0207657_101632132	3300025919	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRADERMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQLRDFSFGARVRPLFARAA
Ga0207657_104415112	3300025919	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKLISVSRRTRERVADGDGRDSIVITALGTGDELAPRRRDDTHDPAALAALLVRTLDIQDGTGVVLADFASEEFAAAVVARIAALGRDVTCTGQVANFAFSSAARLNTGVYCSRLACVSWSRRVSSDCARALQSCW
Ga0207652_117631411	3300025921	Corn Rhizosphere	THWARFRRAKLISVSRRTREATPAGDGLLITALGASGPCDDGGRSGTHDPEALAALLVRTLDIQDGTGVVLADFDSEEYAAAVVARIAALGRAVTCTGEVARFAFGARVWPRSSKS
Ga0207694_100260362	3300025924	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRRADERMPDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQLRDFSFGARVRPLFARAA
Ga0207659_110153482	3300025926	Miscanthus Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERAAPAPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA
Ga0207687_105506621	3300025927	Miscanthus Rhizosphere	PPTDRGRTMTTYVLSLSGDEEKAANATHWARFRRAKMISVSRKGSERVVPEAGRDSIVIASHGAGDQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA
Ga0207687_112502461	3300025927	Miscanthus Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERAAPAPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQ
Ga0207690_111653742	3300025932	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRKADQHTSDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQV
Ga0207686_107872492	3300025934	Miscanthus Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERAAPAPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA
Ga0207709_100159562	3300025935	Miscanthus Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRKGSERAAPDAGRDSIVIAGHGAGDQRATSCNPATHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLAARAA
Ga0207670_108475652	3300025936	Switchgrass Rhizosphere	MATYVLSLTGDEEKAANATHWAKFRRAKLISVSRKADQQTSDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLAARAA
Ga0207669_103085582	3300025937	Miscanthus Rhizosphere	MTTYVLSLSGDEEMAANATHWARFRRAKMISVSRQGGERVAPGPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA
Ga0207704_103804551	3300025938	Miscanthus Rhizosphere	MTTYVLSLTGDEEKAANATHWARFRRAKMISVSRKGSERAAPDAGRDSIVIAGHGAGDQRATSCNPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSF
Ga0207689_100903263	3300025942	Miscanthus Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKLISVSRKADQQTSDAGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLAARAA
Ga0207667_1000756711	3300025949	Corn Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERVAPAPDRDSIVIAAHGAGERPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPRFARAA
Ga0207648_113278411	3300026089	Miscanthus Rhizosphere	MTTYVLSLSGDEEKVANATHWARFRRAKMISVSRKGSERVAPETGRESIVIASHGAGDQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA
Ga0207674_102348592	3300026116	Corn Rhizosphere	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRRGSERAAPGPDRDSIVIAAHGAGERPATSCDPATHDPAALAALLVRTLDIQDGTSVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA
Ga0207674_103636582	3300026116	Corn Rhizosphere	MTTYVLSLTGDEEKAANATHWAKFRRAKMISVSRQADQRASGPGRDSIVIAEHGAGDRRATSCNPSTHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA
Ga0207683_118392322	3300026121	Miscanthus Rhizosphere	DEEKAANATHWARFRRAKMISVSRKGSERAAPEAGRDSIVIASHGAGDQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA
Ga0302151_1000017826	3300028562	Bog	MTTYVLSLTGDEEKAANATHWATFRKARLVSVSRKTPGMLPAATTTKDSIVITAHGAVDPIEAQRAAATRHPQALAALLVRTLDIQDGAGVVLADFDSDQFAADVVSEIAALGRDVICPGRASKFAFGLRVGSGSWRA
Ga0302279_1000044914	3300028783	Bog	MTTYVLSLTGDEEKAANATHWTRFRQAKLISVSRSTSDSVPADPTGQESIIVRKPGTAEQRRRPGTHDPEALAALLLRTLDVQDGQGVVLADFDNEDFAADVVARMAALGRAVSCTGRVENFAPRASLRARLSRA
Ga0302157_101062202	3300028813	Bog	MTTYVLSLTGDEEKAANATHWARFRRAKLFSVSRGGASEGTAADMTGKGSIVIVAQGSADQRERSRRPDMHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVARIAALGRDVTCTGQVANFAFSAGVRSRFSRS
Ga0311368_100356923	3300029882	Palsa	MTTYVLSLTGDEEKAANATHWARFRRAKLFSVSRGGASERTPADMTGKDSIVIVAQGSADQRERSHRPDMHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVARIAALGRAVTCTGQVANFAFSAGVRSRFSRS
Ga0247044_10400632	3300029896	Cryconite	TGDEEKAANATHWAKFRRAKLISVSRRTGEAAPAPAAGKDSILITAQGRAGQCETNTRPGTHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVSRIAALGRAVTCTGQVANFAFSARVWARSSKS
Ga0311330_106106172	3300029945	Bog	MTTYVLSLTGDEEKAANATHWARFRRAKLFSVSRGASEGTAADMTRKDSIVIVAQGSADQCERSHRPDMHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAAAVVARIAALGRDVTCTGQVANFAFSAGVRSRFSRS
Ga0311371_101005914	3300029951	Palsa	MTTYVLSLTGDEEKAANATHWARFRRAKLLSISRNSGERASAGVQRDSIVISEHGPACEREASRATGTHDPEALAALLVRTLDIQDGTGVVLADFHSEEFAADVVARIASLGRAVTCTGQVKNFAFGVRVRGRSSHA
Ga0311371_102832651	3300029951	Palsa	GDEEKAANATHWARFRRAKLFSVSRGGASERTPADMTGKDSIVIVAQGSADQRERSHRPDMHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVARIAALGRAVTCTGQVANFAFSAGVRSRFSRS
Ga0302305_11396311	3300030046	Palsa	LTGDEEKAANATHWARFRRAKLFSVSRGGASERTPADMTGKDSIVIVAQGSADQRERSHRPDMHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVARIAALGRAVTCTGQVANFAFSAGVRSRFSRS
Ga0311372_106353013	3300030520	Palsa	AMTTYVLSLTGDEEKAANATHWAKFRRAKLISISRKPGERKAVDAGRDSIVIAEHGPADPCETSRAPYTHDPQALAALLVRTLDIQDGMGVVLADFDNEDFAADVVARIAALGRDVTCTGRLANFAFSAGVRLRHHLAG
Ga0302309_100556012	3300030687	Palsa	MTTYVLSLTGDEEKAANATHWARFRRAKLFSVSRGGASERTPADMTGKDSIVIVAQGSADQRERSHRPDMHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVARIAALGRDVTCTGQVANFAFSAGVRSRFSRS
Ga0302308_104761291	3300031027	Palsa	MTTYVLSLTGDEEKAANATHWARFRRAKLFSVSRGGASERTPADMTGKDSIVIVAQGSADQCERSHRPDMHDPEALAALLVRTLDIQDGMGVVLADFDNEEFAADVVARIAALGRDVTCTGQVANFAFSAGVRSRFSRS
Ga0302323_1009349122	3300031232	Fen	MTTYVLSLTGDEEKAANATHWARFRRAKLLSISRNRSERTPAATPGGDSIVIAAHGSVDRCETQRLMQARDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRDVTCTGQVANFTFGAGVRRSLSLS
Ga0318555_104959901	3300031640	Soil	MTTYVLSLTGDEEKAANATHWARFRKAKLLSVSRKPAERSAADRAGKDSIVILERGSTHPLEPQRRPGTHDPEALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRDVTCTGRIADFAFGLGVRGRFSRA
Ga0310813_104114711	3300031716	Soil	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERAAPSPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA
Ga0311351_105211902	3300031722	Fen	MTTYVLSLTGDEEKAANATHWARFRRAKLLSVSRNRSERAPAATPGGDSIVIAAHGSVDRCETQRLMQARDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRDVTCTGQVANFTFGAGVRRSLSLS
Ga0318517_100764162	3300031835	Soil	MTTYVLSLTGDEEKAANATHWARFRKAKLLSVSRKPAERSAADRAGKDSIVILERGSTHPLEPQRRPGTHDPEALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRDVTCTGRIADFAFGLGVRGRPLERPRADSGSQAVGRHCRRQTCCEFDHSFCTV
Ga0318522_103744862	3300031894	Soil	MTTYVLSLTGDEEKAANATHWARFRKAKLLSVSRKPAERSAADRAGKDSIVILERGSTHPLEPQRRPGTHDPEALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRDVTCTGRIADFAFGLGV
Ga0302322_1010286622	3300031902	Fen	MTTYVLSLTGDEEKAANATHWARFRRAKLLSISRNRSERTPAATPGGDSIVIAAHGSVDRCETQRLMQARDPAALAALLVRTLDIQDGMGVVLADFDSEEFAADVVARIAALGRDVTCTGQVANFTFGAGVRRSLSLS
Ga0311367_103053132	3300031918	Fen	MTTYVLSLTGDEEKAANATHWARFRRAKLLSVSRNRSERGPAAAPGGDSIVIAAHGSVDRCETQRLMQARDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRDVTCTGQVANFTFGAGVRRSLSLS
Ga0311367_105643981	3300031918	Fen	MTTYVLSLTGAEERAANATHWATFRKARLVSVSRSARGGALVDAVPADNIVVTGHGPVDSPGASGGARGLHPQALAALLVRTLDIQDGAGVVLADFDSEEFAADVVAQIAALGRDVRCSGARHFAFSAGVGLRTSRS
Ga0308176_116168872	3300031996	Soil	HWARFRRAKMISVSRQAGERVAQAPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPRFARAA
Ga0306920_1017778451	3300032261	Soil	MTTYVLSLIGDEEKSANATHWAKFRRAKMISVSRKGTERLPEAGRDSIVIASHGAGEQRATSCNPATHDPAALAALLVRTLDIQDGTGVVLADFDSEEFAADVVARIAALGRSVTCTGQVRDFSFGARVRPLFARAA
Ga0335083_101916863	3300032954	Soil	MTTYVLSLDGDEEKAANATHWATFRKARMVSVSRGPRDAAPVEPAPADSIVITGHGPLDELSVTRHPQALAALLVRTLDIQDGAGVVLADFDSDEFAADVVAQIAALGRAVKCPGRASKFAFSAGVRLRSPRP
Ga0318519_110360721	3300033290	Soil	MTTYVLSLTGDEEKAANATHWARFRKAKLLSVSRKPAERSAADRAGKDSIVILERGSTHPLEPQRRPGTHDPEALAALLVRTLDIQDGTGVVLADFDNEEFAADVVARIAALGRDVTCTG
Ga0373959_0164061_4_420	3300034820	Rhizosphere Soil	MTTYVLSLSGDEEKAANATHWARFRRAKMISVSRQGGERVAPGPDRDSIVIAAHGAGEQPATSCDPATHDPAALAALLVRTLDIQDGTGVVLADFDNEAFAADVVARIAALGRRVTCTGQVRDFSFGARVRPLFARAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077376

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences