Metagenome Family F077300

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077300
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	51 residues
Representative Sequence	MNDPREEYNRLHDHMSAIARERDWLQREVERLTDELYLAHEALRREMP
Number of Associated Samples	78
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	32.48 %
% of genes near scaffold ends (potentially truncated)	24.79 %
% of genes from short scaffolds (< 2000 bps)	80.34 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (73.504 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (27.350 % of family members)
Environment Ontology (ENVO)	Unclassified (65.812 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (55.556 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.58% β-sheet: 0.00% Coil/Unstructured: 43.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01464	SLT	8.55
PF01844	HNH	5.98
PF00145	DNA_methylase	2.56
PF04586	Peptidase_S78	2.56
PF13302	Acetyltransf_3	1.71
PF14279	HNH_5	1.71
PF13481	AAA_25	0.85
PF03354	TerL_ATPase	0.85
PF08774	VRR_NUC	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	2.56
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	2.56
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.45 %
Unclassified	root	N/A	8.55 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	88.03 %
Unclassified	root	N/A	8.55 %
cellular organisms	root	All Organisms → cellular organisms	3.42 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	73.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.53 %
Unclassified	root	N/A	8.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.42 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	73.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.53 %
Unclassified	root	N/A	8.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	73.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.53 %
Unclassified	root	N/A	8.55 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	73.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.53 %
Unclassified	root	N/A	8.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	73.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.53 %
Unclassified	root	N/A	8.55 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	73.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.53 %
Unclassified	root	N/A	8.55 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	73.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.53 %
Unclassified	root	N/A	8.55 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	73.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.53 %
Unclassified	root	N/A	8.55 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	73.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.53 %
Unclassified	root	N/A	8.55 %
Streptomyces sp. 7R016	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 7R016	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10005924	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4817	Open in IMG/M
3300000756\|JGI12421J11937_10051655	All Organisms → Viruses → Predicted Viral	1329	Open in IMG/M
3300002408\|B570J29032_109620973	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	949	Open in IMG/M
3300002408\|B570J29032_109755486	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300002835\|B570J40625_101510215	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300003277\|JGI25908J49247_10166933	Not Available	510	Open in IMG/M
3300003404\|JGI25920J50251_10013945	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2677	Open in IMG/M
3300003404\|JGI25920J50251_10097108	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	682	Open in IMG/M
3300004240\|Ga0007787_10148475	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1124	Open in IMG/M
3300005584\|Ga0049082_10101418	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1008	Open in IMG/M
3300005584\|Ga0049082_10158327	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	783	Open in IMG/M
3300005662\|Ga0078894_11444438	Not Available	573	Open in IMG/M
3300006037\|Ga0075465_10000102	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14644	Open in IMG/M
3300006484\|Ga0070744_10017897	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2102	Open in IMG/M
3300006484\|Ga0070744_10053003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1188	Open in IMG/M
3300006803\|Ga0075467_10733617	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	503	Open in IMG/M
3300006805\|Ga0075464_10016337	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3772	Open in IMG/M
3300006805\|Ga0075464_10478414	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	761	Open in IMG/M
3300006805\|Ga0075464_10763656	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	600	Open in IMG/M
3300007559\|Ga0102828_1074205	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	810	Open in IMG/M
3300008055\|Ga0108970_10117171	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	631	Open in IMG/M
3300009149\|Ga0114918_10082683	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2037	Open in IMG/M
3300009149\|Ga0114918_10359541	Not Available	801	Open in IMG/M
3300009149\|Ga0114918_10732178	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	517	Open in IMG/M
3300009152\|Ga0114980_10051074	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2508	Open in IMG/M
3300009159\|Ga0114978_10434032	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	781	Open in IMG/M
3300009160\|Ga0114981_10102000	All Organisms → Viruses → Predicted Viral	1590	Open in IMG/M
3300009161\|Ga0114966_10195824	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1282	Open in IMG/M
3300009181\|Ga0114969_10212921	All Organisms → Viruses → Predicted Viral	1180	Open in IMG/M
3300010885\|Ga0133913_10240045	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4815	Open in IMG/M
3300011009\|Ga0129318_10133590	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	742	Open in IMG/M
3300012663\|Ga0157203_1029853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 7R016	767	Open in IMG/M
3300013004\|Ga0164293_10002997	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14359	Open in IMG/M
3300013372\|Ga0177922_10210563	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	837	Open in IMG/M
3300013372\|Ga0177922_10593582	All Organisms → Viruses → Predicted Viral	1108	Open in IMG/M
3300014811\|Ga0119960_1002414	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1104	Open in IMG/M
3300014811\|Ga0119960_1020628	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	843	Open in IMG/M
3300017716\|Ga0181350_1113978	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	654	Open in IMG/M
3300017716\|Ga0181350_1136899	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	579	Open in IMG/M
3300017716\|Ga0181350_1147622	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	550	Open in IMG/M
3300017716\|Ga0181350_1156792	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	529	Open in IMG/M
3300017736\|Ga0181365_1057931	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	963	Open in IMG/M
3300017754\|Ga0181344_1024787	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1847	Open in IMG/M
3300017754\|Ga0181344_1080325	Not Available	957	Open in IMG/M
3300017754\|Ga0181344_1183732	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	590	Open in IMG/M
3300017754\|Ga0181344_1185813	Not Available	586	Open in IMG/M
3300017766\|Ga0181343_1099692	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	825	Open in IMG/M
3300017766\|Ga0181343_1205611	Not Available	538	Open in IMG/M
3300017774\|Ga0181358_1037649	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1869	Open in IMG/M
3300017777\|Ga0181357_1088284	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1183	Open in IMG/M
3300017777\|Ga0181357_1305588	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	539	Open in IMG/M
3300017780\|Ga0181346_1173720	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	792	Open in IMG/M
3300017780\|Ga0181346_1223667	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	669	Open in IMG/M
3300017785\|Ga0181355_1051842	All Organisms → Viruses → Predicted Viral	1742	Open in IMG/M
3300017785\|Ga0181355_1202884	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	779	Open in IMG/M
3300017785\|Ga0181355_1263170	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	658	Open in IMG/M
3300019784\|Ga0181359_1050116	All Organisms → Viruses → Predicted Viral	1611	Open in IMG/M
3300019784\|Ga0181359_1074978	All Organisms → Viruses → Predicted Viral	1276	Open in IMG/M
3300019784\|Ga0181359_1095513	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1096	Open in IMG/M
3300019784\|Ga0181359_1129053	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	894	Open in IMG/M
3300019784\|Ga0181359_1189380	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	672	Open in IMG/M
3300020048\|Ga0207193_1017686	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9217	Open in IMG/M
3300020172\|Ga0211729_10043886	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	596	Open in IMG/M
3300020205\|Ga0211731_10142061	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	942	Open in IMG/M
3300020205\|Ga0211731_10630666	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1071	Open in IMG/M
3300020205\|Ga0211731_11600562	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	734	Open in IMG/M
3300020205\|Ga0211731_11648705	All Organisms → Viruses → Predicted Viral	3017	Open in IMG/M
3300020527\|Ga0208232_1012192	All Organisms → Viruses → Predicted Viral	1308	Open in IMG/M
3300020554\|Ga0208599_1023564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	978	Open in IMG/M
3300022190\|Ga0181354_1040962	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1535	Open in IMG/M
3300024262\|Ga0210003_1156755	Not Available	970	Open in IMG/M
3300024346\|Ga0244775_10101599	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2445	Open in IMG/M
3300024346\|Ga0244775_10254483	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1463	Open in IMG/M
3300024348\|Ga0244776_10491480	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	795	Open in IMG/M
3300025451\|Ga0208426_1000333	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7722	Open in IMG/M
3300027193\|Ga0208800_1009404	All Organisms → Viruses → Predicted Viral	1240	Open in IMG/M
3300027659\|Ga0208975_1146300	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	661	Open in IMG/M
3300027679\|Ga0209769_1024697	All Organisms → Viruses → Predicted Viral	2107	Open in IMG/M
3300027707\|Ga0209443_1190942	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	725	Open in IMG/M
3300027754\|Ga0209596_1002611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14778	Open in IMG/M
3300027759\|Ga0209296_1054502	All Organisms → Viruses → Predicted Viral	2068	Open in IMG/M
3300027797\|Ga0209107_10035288	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2858	Open in IMG/M
3300027797\|Ga0209107_10457392	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	573	Open in IMG/M
3300027899\|Ga0209668_10662121	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	699	Open in IMG/M
3300027973\|Ga0209298_10028491	All Organisms → Viruses → Predicted Viral	2725	Open in IMG/M
3300027973\|Ga0209298_10049246	All Organisms → Viruses → Predicted Viral	1963	Open in IMG/M
3300028025\|Ga0247723_1006156	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5287	Open in IMG/M
3300028025\|Ga0247723_1008181	All Organisms → Viruses → Predicted Viral	4353	Open in IMG/M
3300031952\|Ga0315294_10995640	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	700	Open in IMG/M
3300032046\|Ga0315289_10035555	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6411	Open in IMG/M
3300032046\|Ga0315289_10704056	Not Available	914	Open in IMG/M
3300032342\|Ga0315286_11926095	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	552	Open in IMG/M
3300033978\|Ga0334977_0144708	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1235	Open in IMG/M
3300033981\|Ga0334982_0001556	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14380	Open in IMG/M
3300033984\|Ga0334989_0253580	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	952	Open in IMG/M
3300033995\|Ga0335003_0384140	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	606	Open in IMG/M
3300033996\|Ga0334979_0002151	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14383	Open in IMG/M
3300034013\|Ga0334991_0400526	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	527	Open in IMG/M
3300034019\|Ga0334998_0491245	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	686	Open in IMG/M
3300034020\|Ga0335002_0192811	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1275	Open in IMG/M
3300034021\|Ga0335004_0444395	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	722	Open in IMG/M
3300034022\|Ga0335005_0456977	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	720	Open in IMG/M
3300034061\|Ga0334987_0232290	All Organisms → Viruses → Predicted Viral	1271	Open in IMG/M
3300034061\|Ga0334987_0318718	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1021	Open in IMG/M
3300034061\|Ga0334987_0392522	Not Available	882	Open in IMG/M
3300034062\|Ga0334995_0371044	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	907	Open in IMG/M
3300034092\|Ga0335010_0681860	Not Available	508	Open in IMG/M
3300034093\|Ga0335012_0408700	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	662	Open in IMG/M
3300034101\|Ga0335027_0127287	All Organisms → Viruses → Predicted Viral	1902	Open in IMG/M
3300034101\|Ga0335027_0163968	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1616	Open in IMG/M
3300034101\|Ga0335027_0264085	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1182	Open in IMG/M
3300034102\|Ga0335029_0329719	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	950	Open in IMG/M
3300034104\|Ga0335031_0611434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	641	Open in IMG/M
3300034119\|Ga0335054_0172495	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1315	Open in IMG/M
3300034121\|Ga0335058_0436012	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	749	Open in IMG/M
3300034167\|Ga0335017_0314652	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	869	Open in IMG/M
3300034167\|Ga0335017_0608454	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.15%
Host-Associated	Host-Associated	0.85%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.44%
Terrestrial	Environmental → Terrestrial	1.71%
Plants	Host-Associated → Plants	0.85%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	82.05%
Marine	Environmental → Aquatic → Marine	15.38%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.71%
Leaf	Host-Associated → Plants → Leaf	0.85%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	41.03%
Lentic	Environmental → Aquatic → Freshwater → Lentic	38.46%
Coastal	Environmental → Aquatic → Marine → Coastal	5.98%
Oceanic	Environmental → Aquatic → Marine → Oceanic	3.42%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.42%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.71%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.85%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	36.75%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	31.62%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.27%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	3.42%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	3.42%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.42%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.56%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.71%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	27.35%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	22.22%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.55%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.98%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.13%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	3.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.42%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	3.42%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.42%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.56%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.56%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.56%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.71%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	1.71%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.71%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.85%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.85%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.85%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006037	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014811	Aquatic viral communities from ballast water - Michigan State University - AB_ballast water	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025451	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100059241	3300000756	Freshwater And Sediment	MPRNHRRAKEMMNPQEEYNRLHDHMSAIARERDFLRREVERLTDELYLAHEALRRAFPENQP*
JGI12421J11937_100516554	3300000756	Freshwater And Sediment	MNDPREEYNRLHDHMSAIGRERDWLQKEVERLTDELFLAHEALRREMP*
B570J29032_1096209732	3300002408	Freshwater	MTYYSDKDYGILHDHMSAIARERDWLQLEVARLTDELYLAHEALRRAFPENQA*
B570J29032_1097554861	3300002408	Freshwater	MTYYSDKDYGILHDHMSAIARERDWLQLEVARLTDELYLAHEALRRAFPENQP*
B570J40625_1015102151	3300002835	Freshwater	MMNPQEEYNRLHDHMSAIARERDFLRREVERLTDELNLAHEALRRAFPEYQP*
JGI25908J49247_101669331	3300003277	Freshwater Lake	KKVSYYSDKDYGILHDHMSAIARERDWLQREVDRLTDELELAHEALRREMP*
JGI25920J50251_100139459	3300003404	Freshwater Lake	MRNPNDEYDRLHDHMTAIARERDWLQLEVQRLTDELYLAHEALKR
JGI25920J50251_100971082	3300003404	Freshwater Lake	MNNPMEQYNRLHDHMSAIARERDWLQLEVQRLTDELELAHEALRREMP*
Ga0007787_101484751	3300004240	Freshwater Lake	MFSRHRWAKEMNDPREEYNRLHDHMSAIARERDWLQREVERLTDELELAHEALRREMP*
Ga0049082_101014181	3300005584	Freshwater Lentic	MNNPDESYNRLHDHMAAIARERDWLQTEVQRLTDELYLAHEAL
Ga0049082_101583273	3300005584	Freshwater Lentic	MRNPDESYNRLHDHMTAIARERDWLQTEVQRLTDELYLAHEALKREFT
Ga0078894_114444382	3300005662	Freshwater Lake	NDPREEYNRLHDHMSALGRERDWLQREVERLTDELELAHEALRREMP*
Ga0075465_1000010220	3300006037	Aqueous	MSNPNEQYDRLHDHCQAIARERDWYKSEVDRLTDELELAHEALRRQMP*
Ga0070744_100178974	3300006484	Estuarine	MLCRYRWAKEMNNPMEQYNRLHDHMMAIARERDWLQKEVERLTDELALAREALRREMP*
Ga0070744_100530032	3300006484	Estuarine	MRNPEEEYNRLHDHMTAIARERDWLQREVDRLTDELHLAHEALRREMP*
Ga0075467_107336171	3300006803	Aqueous	MSNPNEQYDRLHDHCQAIARERDWYKSEVDRLTDELELAHEALRREMP*
Ga0075464_100163373	3300006805	Aqueous	VSNPNEQYDRLHDHCQAIARERDWYKSEVDRLTDELELAHEALRREMP*
Ga0075464_104784142	3300006805	Aqueous	MRNPSEEYDRLHDHCQAIARERDWYKSEVDRLTDELELAHEALRREMP*
Ga0075464_107636562	3300006805	Aqueous	PDEEYNRLHDHCQAIARERDWLKSEVDRLTDELNLAHEALRRAFRENQQ*
Ga0102828_10742053	3300007559	Estuarine	MNNPMEQYNRLHDHMMAIARERDWLQKEVERLTDELALAREALRREMP*
Ga0108970_101171711	3300008055	Estuary	MNDPREEYNRLHDHMSAIARERDWLQREVERLTDELELAHEALARRYTRP*
Ga0114918_100826833	3300009149	Deep Subsurface	MINPQEEYNRLHDHCQAIARERDWLQSENDRLTDELNLAHEAMRRAFPENQGDKQ*
Ga0114918_103595412	3300009149	Deep Subsurface	NPQEEYNRLHDHMSAIARERDWLQSENDRLTDELHLAHEAMRRAFPENQGDKQ*
Ga0114918_107321781	3300009149	Deep Subsurface	MINPQEEYNRLHDHCQAIARERDWLQLEVNRLTDELHLAHEALKREF
Ga0114980_100510741	3300009152	Freshwater Lake	MNDPREEYNRLHDHMSATARERDWLQREVERLTDELELAHEALRREMP*
Ga0114978_104340322	3300009159	Freshwater Lake	MRNPLEEYNRLHDHMMAIARERDALQIEVQRLIDELYIAHQALGGEMP*
Ga0114981_101020002	3300009160	Freshwater Lake	MNDPREEYNRLHDHMSAIARERDWLQREVERLTDELELAHEALRREMP*
Ga0114966_101958244	3300009161	Freshwater Lake	MNNPSEHYDRLHDHMMAIARERDWLKTEVDRLTDELYLAHEAL
Ga0114969_102129213	3300009181	Freshwater Lake	MNNPDESYNRLHDHMSAIARERDWLLREVERLTDELALAHEALRRQMQNATDGFQVP*
Ga0133913_102400455	3300010885	Freshwater Lake	MNNPDESYNRLHDHMSAIARERYWLLREVERLTDELALAHEALRRQMQNATDGFQVP*
Ga0129318_101335901	3300011009	Freshwater To Marine Saline Gradient	MPRDYRWAEKMMNPQEEYNRLHDHMTALGRERDALQREVERLTDELYLAHEALRREMP*
Ga0157203_10298532	3300012663	Freshwater	RWAVLGRDRWAKEMNNPQEEYNRLHDHMTALGRERDWLQREVERLTDELALAHEALRREMP*
Ga0164293_1000299722	3300013004	Freshwater	MMNPQEEYNRLHDHCQALGRERDFLLREVERLTDELHLAHEALRRQML*
Ga0177922_102105631	3300013372	Freshwater	MRNPDEEYNRLHDHCQALGRERDWLKSEVDSLTDELNLANEALRRAFPEIQQ*
Ga0177922_105935823	3300013372	Freshwater	MNDPREEYNRLHDHMSAIGRERDWLQKEVERLTDELELAHEALRREMP*
Ga0119960_10024143	3300014811	Aquatic	MNNPQEQYNRLHDHMTAIARERDWLQKEVKRLTDELELAREALRREMP*
Ga0119960_10206281	3300014811	Aquatic	HPRGFPVTIEQADRLHDHCQAIARERDWYKLEVDRLTDELELAHEALRRQMP*
Ga0181350_11139782	3300017716	Freshwater Lake	MRNPDESYNRLHDHMTAIARERDWLQLEVQRLTDELHLALKALRRQMP
Ga0181350_11368993	3300017716	Freshwater Lake	MRNPNDEYDRLHDHMTAIARERDWLQLEVQRLTDELYLAHEALN
Ga0181350_11476222	3300017716	Freshwater Lake	MLGCHRWVKEMKNPLEEYNRLHDHMSAIARERDWLQLEVQRLTDELELAHEALRREMP
Ga0181350_11567922	3300017716	Freshwater Lake	MFNRYRWAKEMNDPREEYNRLHDHMSAIGRERDWLQKEVERLTDELELAHEALRREMP
Ga0181365_10579313	3300017736	Freshwater Lake	MNDPREEYNRLHDHMSAIARERDWLQKEVERLTDELYLAH
Ga0181344_10247875	3300017754	Freshwater Lake	MTYYSDKDYGILHDHLSAIARERDWLQKEVDRLTDELYLAHEAMRRAFPENQA
Ga0181344_10803252	3300017754	Freshwater Lake	YYSDKDYGILHDHMSAIARERDWLQLEVARLTDELYLAHEALRRAFPENQA
Ga0181344_11837321	3300017754	Freshwater Lake	MIDPREEYNRLHDHMSALGRERDWLQREVERLTDELELAHEALRREMP
Ga0181344_11858132	3300017754	Freshwater Lake	LHDHMSALGRERDWLQREVERLTNELELAHEALRREMP
Ga0181343_10996921	3300017766	Freshwater Lake	TYYSDKDYGILHDHMSAIARERDWLQLEVARLTDELYLAHEALRRAFPENQA
Ga0181343_12056112	3300017766	Freshwater Lake	RLHDHMSAIARERDWLQKEVERLTDELYLAHEALRREMP
Ga0181358_10376493	3300017774	Freshwater Lake	VSYYSDKDYGILHDHMSAIARERDWLQREVDRLTDELELAHEALRREMP
Ga0181357_10882842	3300017777	Freshwater Lake	MFSRHRWVKKMNDPREEYNRLHDHMSAIARERDWLQKEVERLTDELYLAHEALRREMP
Ga0181357_13055882	3300017777	Freshwater Lake	MLCRNRWAKEMKNPLEEYNRLHDHMSAIALERDWLQLEVQRLTDELELAHEALRREMP
Ga0181346_11737201	3300017780	Freshwater Lake	MRNPTDEYDRLHDHMTAIARERDWLQKEVERLTDELYLAHEALKREFVL
Ga0181346_12236672	3300017780	Freshwater Lake	MNDPREEYNRLHDHMSAIGRERDWLQKEVERLTDELELAHEALRREMP
Ga0181355_10518424	3300017785	Freshwater Lake	MKNPDQEYDRLHDHMTAIARERDWLKSEVERLKPEMDRLTDELYLAHEALRRAFP
Ga0181355_12028841	3300017785	Freshwater Lake	MRNPNESYNRLHDHMTAIARERDWLQLEVQRLTDELYLAHEALKRF
Ga0181355_12631701	3300017785	Freshwater Lake	MKNPLEEYNRLHDHMSAIALERDWLQLEVQRLTDELELAHEALRREMP
Ga0181359_10501164	3300019784	Freshwater Lake	MFSRNRWAKKVSYYSDKDYGILHDHMSAIARERDWLQREVDRLTDELELAHEALRREMP
Ga0181359_10749783	3300019784	Freshwater Lake	MRNPDEEYNRLHDHCQAIARERDWLKSEVDRLTDELNLAHEALRRAFPENQQ
Ga0181359_10955132	3300019784	Freshwater Lake	MNDPREEYNRLHDHMSAIARERDWLQREVERLTDELELAHEALRREMP
Ga0181359_11290531	3300019784	Freshwater Lake	MKNPLEEYNRLHDHMSAIARERDWLQLEVQRLTDELELAHEALRREMP
Ga0181359_11893801	3300019784	Freshwater Lake	MFSRHRWAKEMNNPMEQYNRLHDHMSAIARERDWLQLEVQRLTDELELAHEAL
Ga0207193_101768617	3300020048	Freshwater Lake Sediment	MNPQEEYNRLHDHMSAIARERDFLRREVERLTDELNLAHEALRRAFPENQL
Ga0211729_100438861	3300020172	Freshwater	MTYYNDKDYGILHDHMKAIARERDWLQKEVERLTDELYLAHEALRREMP
Ga0211731_101420611	3300020205	Freshwater	MKNPQDEYNRLHDHCQALGRERDWLQKEVERLTDELELAHEALRREMP
Ga0211731_106306662	3300020205	Freshwater	MTYYNDKDYGVLHDHMTAIARERDWLQSEVARLTDELYLAHEALRREMP
Ga0211731_116005621	3300020205	Freshwater	VPRDNRWAKKMSNPQEEYNRLHDHMSAIARERDYLQSEVQRLTDELYLAHEALRREMP
Ga0211731_116487055	3300020205	Freshwater	MNNPQDEYNRLHDHAQALGRERDWLQREVERLTDELELAYEALRREMP
Ga0208232_10121922	3300020527	Freshwater	MTYYSDKDYGILHDHMSAIARERDWLQLEVARLTDELYLAHEALRRAFPENQA
Ga0208599_10235642	3300020554	Freshwater	MTYYSDKDYGILHDHMSAIARERDWLQLEVARLTDELYLAHEALRRAFPENQP
Ga0181354_10409623	3300022190	Freshwater Lake	MFSRHRWAKEMNDPREEYNRLHDHMSAIARERDWLQREVERLTDELELAHEALRREMP
Ga0210003_11567552	3300024262	Deep Subsurface	MINPQEEYNRLHDHMSAIARERDWLQSENDRLTDELHLAHEAMRRAFPENQGDKQ
Ga0244775_101015995	3300024346	Estuarine	MLCRYRWAKEMNNPMEQYNRLHDHMMAIARERDWLQKEVERLTDELALAREALRREMP
Ga0244775_102544831	3300024346	Estuarine	MRNPEEEYNRLHDHMTAIARERDWLQREVDRLTDELHLAHEALRREMP
Ga0244776_104914802	3300024348	Estuarine	MNNPMEQYNRLHDHMMAIARERDWLQKEVERLTDELALAREALRREMP
Ga0208426_10003332	3300025451	Aqueous	MSNPNEQYDRLHDHCQAIARERDWYKSEVDRLTDELELAHEALRRQMP
Ga0208800_10094043	3300027193	Estuarine	MLCRYRWAKEMNNPMEQYNRLHDHMMAIARERDWLQKEVERLTDE
Ga0208975_11463002	3300027659	Freshwater Lentic	MNPSEHYDRLHDHMMAIARERDWLKSENDRLTDELNLAHEAMRRAFPENQS
Ga0209769_10246976	3300027679	Freshwater Lake	MNNPMEQYNRLHDHMSAIARERDWLQLEVQRLTDELELAHEALRREMP
Ga0209443_11909422	3300027707	Freshwater Lake	MTYYSDKDYGILHDHMSAIARERDWLQLEVARLTDELYLAHEALSRAFPENQQ
Ga0209596_100261115	3300027754	Freshwater Lake	MNNPDESYNRLHDHMSAIARERDWLLREVERLTDELALAHEALRRQMQNATDGFQVP
Ga0209296_10545022	3300027759	Freshwater Lake	MPRRHRWVKEMNDPREEYNRLHDHMSAIARERDWLQREVERLTDELELAHEALRREMP
Ga0209107_100352887	3300027797	Freshwater And Sediment	MNPQEEYNRLHDHMSAIARERDFLRREVERLTDELYLAHEALRRAFPENQP
Ga0209107_104573921	3300027797	Freshwater And Sediment	MNDPREEYNRLHDHMSAIGRERDWLQKEVERLTDELFLAHEALRREMP
Ga0209668_106621211	3300027899	Freshwater Lake Sediment	MNQQEEYNRLHDHMSAIARERDFLRREVERLTDELNLAHEALRRAFPENQP
Ga0209298_100284917	3300027973	Freshwater Lake	MNDPREEYNRLHDHMSATARERDWLQREVERLTDELELAHEALRREMP
Ga0209298_100492462	3300027973	Freshwater Lake	MSNPNEQYDRLHDHCQAIARERDWYKSEVDRLTDELELAHEALRREMP
Ga0247723_10061564	3300028025	Deep Subsurface Sediment	MRNPDEEYNRLHDHCQALGRERDWYKSEVDRLTDELNLAHEALRRAFPENQQ
Ga0247723_10081815	3300028025	Deep Subsurface Sediment	MRNPDEEYNRLHDHCQALGRERDWYKSEVDRLTDELHLAHEALRREMPDQQ
Ga0315294_109956401	3300031952	Sediment	MNDPREDYNRLHDHMSAIARERDWLQREVERLTDELELAHEALRREMP
Ga0315289_100355551	3300032046	Sediment	MSYYSDKDYGILHDHMSAIARERDWLQLEVARLTDELYLAHEALRRAFSENQA
Ga0315289_107040562	3300032046	Sediment	RCKNTYRRAMFSRHRWAKKMIDPREEYNRLHDHMSALGRERDWLQREVERLTDELELAHEALRREMP
Ga0315286_119260951	3300032342	Sediment	MNNPSEHYDRLHDHMMAIARERDWLQTEVARLTDELYLAHEALKRE
Ga0334977_0144708_327_506	3300033978	Freshwater	MFSRYRWAKKVTYYSDKDYHILHDHMSAIARERDWLLKEVERLTDELELAHEALRREMP
Ga0334982_0001556_13091_13237	3300033981	Freshwater	MRNPSEEYDRLHDHCQALGRERDWLKKEVERLTDELYLAHEALRRAFP
Ga0334989_0253580_687_863	3300033984	Freshwater	MFSRHRWAKEMNDPREEYNRLHDHMSAIARERDWLQREVERLTDELYLAHEALRREMP
Ga0335003_0384140_109_267	3300033995	Freshwater	MRNPSEEYDRLHDHCQALGRERDWLKKEVERLTDELYLAHEAMRRAFPENQQ
Ga0334979_0002151_701_847	3300033996	Freshwater	MMNPQEEYNRLHDHCQALGRERDFLLREVERLTDELHLAHEALRRQML
Ga0334991_0400526_2_139	3300034013	Freshwater	MTYYSDKDYHILHDHMSAIARERDWLQLEVARLTDELYLAHEALRR
Ga0334998_0491245_201_347	3300034019	Freshwater	MNDPREEYNRLHDHMSAIARERDWLLKEVERLTDELELAHEALRREMP
Ga0335002_0192811_703_861	3300034020	Freshwater	MMNPQEEYNRLHDHMSAIARERDFLRREVERLTDELNLAHEALRRAFPENQI
Ga0335004_0444395_3_143	3300034021	Freshwater	MNDPREEYNRLHDHMSAIARERDWLQREVERLTDELYLAHEALRREM
Ga0335005_0456977_316_462	3300034022	Freshwater	MNDPREEYNRLHDHMSAIARERDWLQREVERLTDELYLAHEALRREMP
Ga0334987_0232290_2_136	3300034061	Freshwater	MNDPREEYNRLHDHMSAIARERDWLLKEVERLTDELELAHEALRR
Ga0334987_0318718_186_341	3300034061	Freshwater	MMNPDEQYNRLHDHMSAIARERDWLQSEVNRLTDELHLAHEALRREMPDQQ
Ga0334987_0392522_2_112	3300034061	Freshwater	DHMSAIARERDWLQREVERLTDELYLAHEALRREMP
Ga0334995_0371044_39_197	3300034062	Freshwater	MMNPQEEYNRLHDHMSAIARERDFLRREVERLTDELNLAHEALRRAFPEYQP
Ga0335010_0681860_376_507	3300034092	Freshwater	EEYNRLHDHMSAIARERDWLQREVERLTDELELAHEALRREMP
Ga0335012_0408700_446_604	3300034093	Freshwater	MMNPQEEYNRLHDHMSAIARERDFLRREVERLTDELNLAHEALRRAFPENQL
Ga0335027_0127287_645_791	3300034101	Freshwater	MNDPREEYNRLHDHMSAIARERDWLLKEVERLTDELYLAHEALRREMP
Ga0335027_0163968_673_834	3300034101	Freshwater	MTYYSDKDYGILHDHMSAIGRERDWLKLEVERLTDELYLAHEALRRAFPENQP
Ga0335027_0264085_445_606	3300034101	Freshwater	MSYYSDKDYHILHDHMSAIARERDWLQLEVARLTDELYLAHEALRRAFPENQA
Ga0335029_0329719_96_242	3300034102	Freshwater	MINPREEYNRLHDHMSAIARERDWLQKEVERLTDELYLAHEALRREMP
Ga0335031_0611434_213_374	3300034104	Freshwater	MTYYSDKDYGILHDHMSAIARERDWLQKEVDRLTDELYLAHEALRRAFPENQA
Ga0335054_0172495_701_877	3300034119	Freshwater	MLGRNRWVKEMNDPREEYNRLHDHMSAIARERDWLQKEVERLTDELYLAHEALRREMP
Ga0335058_0436012_175_354	3300034121	Freshwater	MFSRHRWAKKVTYYSDKDYGILHDHMSAIARERDWLQREVERLTDELELAHEALRREMP
Ga0335017_0314652_323_502	3300034167	Freshwater	MFSRHRWAKKVTYYSDKDYGILHDHMSAIARERDWLQREVERLTDELELAYEALRREMP
Ga0335017_0608454_326_472	3300034167	Freshwater	MNDPREEYNRLHDHMSAIARERDWLQKEVERLTDELYLAHEALRREMP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077300

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences