Metagenome / Metatranscriptome Family F077269

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077269
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	43 residues
Representative Sequence	PCPGKRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFYPCPRGT
Number of Associated Samples	87
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.44 %
% of genes from short scaffolds (< 2000 bps)	91.45 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.034 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.590 % of family members)
Environment Ontology (ENVO)	Unclassified (44.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.590 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.68% β-sheet: 0.00% Coil/Unstructured: 87.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01381	HTH_3	11.97
PF05016	ParE_toxin	11.97
PF06718	DUF1203	9.40
PF00072	Response_reg	7.69
PF00486	Trans_reg_C	5.13
PF05973	Gp49	4.27
PF00196	GerE	1.71
PF01177	Asp_Glu_race	1.71
PF02311	AraC_binding	1.71
PF00202	Aminotran_3	1.71
PF05960	DUF885	1.71
PF16640	Big_3_5	0.85
PF00498	FHA	0.85
PF01547	SBP_bac_1	0.85
PF03704	BTAD	0.85
PF11975	Glyco_hydro_4C	0.85
PF13367	PrsW-protease	0.85
PF04116	FA_hydroxylase	0.85
PF14200	RicinB_lectin_2	0.85
PF01266	DAO	0.85
PF10009	DUF2252	0.85
PF01425	Amidase	0.85
PF00005	ABC_tran	0.85
PF02129	Peptidase_S15	0.85
PF08327	AHSA1	0.85
PF13360	PQQ_2	0.85
PF02036	SCP2	0.85
PF05899	Cupin_3	0.85
PF04542	Sigma70_r2	0.85
PF13472	Lipase_GDSL_2	0.85
PF00583	Acetyltransf_1	0.85
PF00581	Rhodanese	0.85
PF01925	TauE	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	4.27
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	4.27
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	1.71
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.85
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.85
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.85
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.85
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.85
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.85
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.85
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.85
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.85

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.03 %
Unclassified	root	N/A	11.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.03 %
Unclassified	root	N/A	11.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.03 %
Unclassified	root	N/A	11.97 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	78.63 %
Unclassified	root	N/A	11.97 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	76.07 %
Unclassified	root	N/A	11.97 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	58.12 %
Unclassified	root	N/A	11.97 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.71 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	11.97 %
Unclassified	root	N/A	11.97 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	9.40 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	7.69 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.56 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.97 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	9.40 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	7.69 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	7.69 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.56 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.97 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	9.40 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	7.69 %
unclassified Micromonosporaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae	5.13 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.56 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	0.85 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.97 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	7.69 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	5.13 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	5.13 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.56 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Phytohabitans flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	0.85 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_108990148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	651	Open in IMG/M
3300005332\|Ga0066388_107094528	Not Available	563	Open in IMG/M
3300005435\|Ga0070714_100070024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3031	Open in IMG/M
3300005435\|Ga0070714_100692731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	983	Open in IMG/M
3300005445\|Ga0070708_101305430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300005610\|Ga0070763_10493284	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300005764\|Ga0066903_102673585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300005764\|Ga0066903_102680765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	967	Open in IMG/M
3300005764\|Ga0066903_102896273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	930	Open in IMG/M
3300005764\|Ga0066903_103531362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	842	Open in IMG/M
3300005764\|Ga0066903_103894166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	801	Open in IMG/M
3300005901\|Ga0075274_1054358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300006576\|Ga0074047_11990301	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006804\|Ga0079221_11802694	Not Available	501	Open in IMG/M
3300006806\|Ga0079220_10671447	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300006854\|Ga0075425_100431557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1517	Open in IMG/M
3300006854\|Ga0075425_102071124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	635	Open in IMG/M
3300007076\|Ga0075435_101809930	Not Available	536	Open in IMG/M
3300010358\|Ga0126370_12501603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	514	Open in IMG/M
3300010359\|Ga0126376_11456571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	712	Open in IMG/M
3300010366\|Ga0126379_10349507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1508	Open in IMG/M
3300010366\|Ga0126379_11288242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	837	Open in IMG/M
3300010376\|Ga0126381_102837691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	691	Open in IMG/M
3300010376\|Ga0126381_103340876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	632	Open in IMG/M
3300010398\|Ga0126383_12835480	Not Available	566	Open in IMG/M
3300010398\|Ga0126383_13389427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300010937\|Ga0137776_1112831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1210	Open in IMG/M
3300011271\|Ga0137393_10064831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2895	Open in IMG/M
3300012211\|Ga0137377_10039324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4330	Open in IMG/M
3300012285\|Ga0137370_10194757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1187	Open in IMG/M
3300012285\|Ga0137370_10391879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	840	Open in IMG/M
3300012363\|Ga0137390_10137271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2426	Open in IMG/M
3300012363\|Ga0137390_10310288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	1559	Open in IMG/M
3300012971\|Ga0126369_11477585	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300012971\|Ga0126369_11679954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	724	Open in IMG/M
3300012971\|Ga0126369_12186503	Not Available	640	Open in IMG/M
3300013772\|Ga0120158_10357069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M
3300016341\|Ga0182035_10359094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300016357\|Ga0182032_10053750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	2627	Open in IMG/M
3300016371\|Ga0182034_11195322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	661	Open in IMG/M
3300016387\|Ga0182040_10146737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1675	Open in IMG/M
3300016445\|Ga0182038_10302983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1307	Open in IMG/M
3300017926\|Ga0187807_1178015	All Organisms → cellular organisms → Bacteria → Terrabacteria group	685	Open in IMG/M
3300017955\|Ga0187817_10505459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300018032\|Ga0187788_10440485	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300020580\|Ga0210403_10488626	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300020581\|Ga0210399_10616231	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300020581\|Ga0210399_11430393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300020582\|Ga0210395_10934096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	644	Open in IMG/M
3300021374\|Ga0213881_10109771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	1197	Open in IMG/M
3300021404\|Ga0210389_10214022	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300021404\|Ga0210389_10708774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	788	Open in IMG/M
3300021407\|Ga0210383_10623742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	929	Open in IMG/M
3300021407\|Ga0210383_11693651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300021479\|Ga0210410_10809889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300021560\|Ga0126371_11957839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	704	Open in IMG/M
3300021560\|Ga0126371_12260871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	657	Open in IMG/M
3300021560\|Ga0126371_12999164	Not Available	572	Open in IMG/M
3300021560\|Ga0126371_13421734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300021860\|Ga0213851_1448833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	672	Open in IMG/M
3300025912\|Ga0207707_10776634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	800	Open in IMG/M
3300025915\|Ga0207693_10236428	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300025929\|Ga0207664_10951915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	770	Open in IMG/M
3300025939\|Ga0207665_10000276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35590	Open in IMG/M
3300027908\|Ga0209006_10851767	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300028803\|Ga0307281_10404832	Not Available	523	Open in IMG/M
3300030511\|Ga0268241_10196578	Not Available	511	Open in IMG/M
3300031474\|Ga0170818_108431481	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300031544\|Ga0318534_10625651	Not Available	611	Open in IMG/M
3300031546\|Ga0318538_10201090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1064	Open in IMG/M
3300031546\|Ga0318538_10458144	Not Available	691	Open in IMG/M
3300031549\|Ga0318571_10180012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	746	Open in IMG/M
3300031573\|Ga0310915_10013666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	4782	Open in IMG/M
3300031680\|Ga0318574_10804649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	551	Open in IMG/M
3300031713\|Ga0318496_10049771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2166	Open in IMG/M
3300031713\|Ga0318496_10677131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	569	Open in IMG/M
3300031723\|Ga0318493_10083340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1579	Open in IMG/M
3300031736\|Ga0318501_10443444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300031744\|Ga0306918_10159993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1670	Open in IMG/M
3300031748\|Ga0318492_10780907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300031751\|Ga0318494_10439179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759	Open in IMG/M
3300031769\|Ga0318526_10046674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1640	Open in IMG/M
3300031782\|Ga0318552_10331184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	775	Open in IMG/M
3300031793\|Ga0318548_10112159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1313	Open in IMG/M
3300031794\|Ga0318503_10075234	Not Available	1055	Open in IMG/M
3300031796\|Ga0318576_10475225	Not Available	590	Open in IMG/M
3300031796\|Ga0318576_10539213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300031797\|Ga0318550_10213629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	934	Open in IMG/M
3300031799\|Ga0318565_10168249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1064	Open in IMG/M
3300031821\|Ga0318567_10052747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2106	Open in IMG/M
3300031832\|Ga0318499_10187247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	807	Open in IMG/M
3300031835\|Ga0318517_10063304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1574	Open in IMG/M
3300031890\|Ga0306925_11233290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300031896\|Ga0318551_10678594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300031947\|Ga0310909_10681339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	855	Open in IMG/M
3300031947\|Ga0310909_11343662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300031954\|Ga0306926_11741823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300032035\|Ga0310911_10093449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1640	Open in IMG/M
3300032035\|Ga0310911_10576837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300032055\|Ga0318575_10279414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300032055\|Ga0318575_10281571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300032059\|Ga0318533_10820798	Not Available	682	Open in IMG/M
3300032064\|Ga0318510_10337377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300032065\|Ga0318513_10673413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300032066\|Ga0318514_10105060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1436	Open in IMG/M
3300032068\|Ga0318553_10246348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	933	Open in IMG/M
3300032068\|Ga0318553_10348661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300032068\|Ga0318553_10390106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300032076\|Ga0306924_12566417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300032091\|Ga0318577_10263174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	826	Open in IMG/M
3300032091\|Ga0318577_10288509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	785	Open in IMG/M
3300032091\|Ga0318577_10427732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300032174\|Ga0307470_10727178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300032261\|Ga0306920_103061774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300032261\|Ga0306920_103266361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	605	Open in IMG/M
3300033290\|Ga0318519_10943216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.44%
Host-Associated	Host-Associated	2.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.02%
Aquatic	Environmental → Aquatic	3.42%
Plants	Host-Associated → Plants	2.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.16%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.63%
Loam	Environmental → Terrestrial → Soil → Loam	12.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.71%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.85%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005901	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1089901481	3300000955	Soil	SFAAFCRHVYSGPDGFAAVKFDVNLDGRVFLPCPRGR*
Ga0066388_1070945282	3300005332	Tropical Forest Soil	QCPGKRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFYPCPRGT*
Ga0070714_1000700241	3300005435	Agricultural Soil	GQSCPPKRRFATFCRIVYAPPYGFAAVKFDVDLNGKMFYPCPRGT*
Ga0070714_1006927311	3300005435	Agricultural Soil	CPRKRRFATFCRVVYAPSYGFAAVKFDVNLDGKTFYPCPHGT*
Ga0070708_1013054302	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DHYVCNPGQPCPGKRRFATFCRLVYAPSYGFAAVKFDVNLDGKIFYPCPRGT*
Ga0070763_104932841	3300005610	Soil	SYAAFCRALYDPPLGFAAVKFDVDLDGRVFYPCPRGT*
Ga0066903_1026735853	3300005764	Tropical Forest Soil	TFCRVVYAPSYGFTAIKFDVNLDGKYFYPCPRGT*
Ga0066903_1026807652	3300005764	Tropical Forest Soil	ATFCARVYAPPGGFAAVKFDVDLDGKVFYPCPTGT*
Ga0066903_1028962731	3300005764	Tropical Forest Soil	KRRFATFCRVVYAPSYGFTAVKFDVNLDGKTFYPCPHGT*
Ga0066903_1035313621	3300005764	Tropical Forest Soil	KNFSTFCRIVYAPSYGYSAVKFNVNLDGSMFHPCPRGT*
Ga0066903_1038941661	3300005764	Tropical Forest Soil	RRFATFCRIVYAPPGGFAAVKFDVDLNGKVFYPCPRGT*
Ga0075274_10543582	3300005901	Rice Paddy Soil	QHRFSSFCHIVYAPADGFAAVKLNVNLDGTMFYPCPRGG*
Ga0074047_119903011	3300006576	Soil	FATFCARVYAPPDGFAAVKFDVNLDGKVFEPCPAGT*
Ga0079221_118026942	3300006804	Agricultural Soil	GQSCPPKRRFATFCRIIYAPPGGFSAVKFDVDLNGKMFYPCPRGT*
Ga0079220_106714472	3300006806	Agricultural Soil	GRRCPPQREFSTFCHTVYSPPRGFAAVKLDVNLDGKTFFPCP*
Ga0075425_1004315575	3300006854	Populus Rhizosphere	DHYVCNPGQPCQGKRSFATFCRLVWGAPGGFSAVKFDVNLDGKVFYPCPRGT*
Ga0075425_1020711243	3300006854	Populus Rhizosphere	DHYVCNPGQPCQGKRSFATFCRLVWGAPGGFSAVKFDVNLNGKVFYPCPRGT*
Ga0075435_1018099302	3300007076	Populus Rhizosphere	AYCRRIYDGKNGFAAVKFDVNLDGRTFYPCPRGR*
Ga0126370_125016031	3300010358	Tropical Forest Soil	CTGGRSFAVFCRKIWAPAYGFAAVKFDVNLDGKVFFPCPRGV*
Ga0126376_114565712	3300010359	Tropical Forest Soil	FATFCRLVWGPPGGFSAVKFDVNLDGKVFYPCPRGT*
Ga0126379_103495073	3300010366	Tropical Forest Soil	PHRFATFCRAIYAPADGFAAVKFDVNLDGKMFYPCPRGI*
Ga0126379_112882423	3300010366	Tropical Forest Soil	NPGQPCQGKRSFATFCRLVWGRAGGFSAIKFDVNLDGKVFYPCPRGT*
Ga0126381_1028376911	3300010376	Tropical Forest Soil	PGQPCPPKRRFATFCRVVYAPPPYGFSAVKFDVNLNGKIFYPCPRGT*
Ga0126381_1033408761	3300010376	Tropical Forest Soil	GADHYVCNPGQNCPRKRRFATFCRLVYAPSYGFAAVKFDVNLDGKTFYPCPRGT*
Ga0126383_128354802	3300010398	Tropical Forest Soil	FATFCRAIYAPADGFSAVKFDVNLDGKMFYPCPRGI*
Ga0126383_133894273	3300010398	Tropical Forest Soil	CPGKRRFATFCRLVWGRPGGFSAVKFDVDLNGKVFYPCPRGT*
Ga0137776_11128311	3300010937	Sediment	VCNPGQSCPPKRRFATFCRLVYAPPYGFTAIKFDVNLDAKTFYPCPNGT*
Ga0137393_100648313	3300011271	Vadose Zone Soil	VSGQTSFATFCRLVYGSPGGFSAVKFDVNLDGKVFYPCPRGT*
Ga0137377_100393245	3300012211	Vadose Zone Soil	CPHGRKTFAAFCRAVYAGPQGYAAVKFGVNLDGKVFLPCPRGR*
Ga0137370_101947572	3300012285	Vadose Zone Soil	CNPGQSCPPKRRFATFCRVVYAPPGGFSAVKFDVDLNGKMFYPCPRGT*
Ga0137370_103918793	3300012285	Vadose Zone Soil	KRSFATFCRLVWGAPGGFSAVKFDVDLNGKVFYPCPRGT*
Ga0137390_101372713	3300012363	Vadose Zone Soil	AKCTGKHSFAAFCRAVYAPPLGFAAVKFDVNLDGKVFYPCPRGT*
Ga0137390_103102881	3300012363	Vadose Zone Soil	NPGRSCPPKRRFATFCRVVYAPPGGFSAVKFDVDLNGKMFYPCPRGT*
Ga0126369_114775851	3300012971	Tropical Forest Soil	FATFCRIIYAPPGGFSAVKFDVDLNGKVFYPCPRGT*
Ga0126369_116799542	3300012971	Tropical Forest Soil	ATFCRVVYAPSYGFAAVKFDVNLDGRTFHPCPHGT*
Ga0126369_121865032	3300012971	Tropical Forest Soil	TFCARVYAPPGGFAAVKFDVDLDGKVFYPCPTGT*
Ga0120158_103570691	3300013772	Permafrost	HQRAFATFCAANYAPSYGFSAVKFDVNLDGKTFFPCPKGA*
Ga0182035_103590941	3300016341	Soil	SCPPKRRFATFCAVVYAPPGGFSAVKFDVNLNGKLFYPCPRGT
Ga0182032_100537506	3300016357	Soil	NPGQPCPGPRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFYPCPRGT
Ga0182034_111953221	3300016371	Soil	QSCPPKRRFATFCRIVYAPPGGFSAVKFDVDLNGKMFFPCPRGT
Ga0182040_101467375	3300016387	Soil	RRSFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0182038_103029834	3300016445	Soil	YVCNPGQQCQGKRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFNPCPRGT
Ga0187807_11780152	3300017926	Freshwater Sediment	DGYVCNPGQSCAGRRSFSAFCRAVYAPSYGFAAVKFDVNLDGAMFYPCPKGV
Ga0187817_105054591	3300017955	Freshwater Sediment	KFATFCRSIYAPSYGFAAVKLDVNLDGSLFYPCPSGI
Ga0187788_104404852	3300018032	Tropical Peatland	STYCSIVYGRVSGFAAVKFDVNLDGSLFYPCPNGT
Ga0210403_104886261	3300020580	Soil	DHYVCNPGQTGQKCTGRRSFAAFCASVYQPSYGFAAVKFDVNLDGKMFFPCPHGS
Ga0210399_106162312	3300020581	Soil	TGQKCTGRRSFAAFCASVYQPSYGFAAVKFDVNLDGKMFFPYPHGS
Ga0210399_114303931	3300020581	Soil	RRFATFCRLVWGPSGGFSAVKFDVNLDGKVFYPCPRGT
Ga0210395_109340962	3300020582	Soil	CPAKRRFATFCRIVYAPPYGFSAVKFDVNLDGKMFYPCPRGT
Ga0210388_104005632	3300021181	Soil	CNPGQTSKKCAGRRSFAAFCAAVYQPSYGFSAVKFDVDLDGKMFFPCPRGT
Ga0213881_101097713	3300021374	Exposed Rock	YVCDPGQRCGYSHRFSTFCRIVYGSPGGFSAVKFNVNLDGSVFYPCPTGR
Ga0210389_102140221	3300021404	Soil	CDPGQACSGRRSFAAFCRAVYSPSYGFAAVKFDVDLDGGKFYPCPTGT
Ga0210389_107087742	3300021404	Soil	YVCNPGQRCPVPRRFATFCQRVWAPAYGFAAVKFDVDLDGRMFFPCPRGR
Ga0210383_106237421	3300021407	Soil	NPGQPCPAKRRFATFCRIVYAPPYGFSAVKFDVNLDGKMFYPCPRGT
Ga0210383_116936511	3300021407	Soil	NPGQHCSHKKNFSTFCHTVYAPPYGYSAVKFNVNLDGTMFYPCPKGT
Ga0210410_108098891	3300021479	Soil	FSTFCRIVYAPPYGYSAVKFNVNLDGTMFYPCPKGT
Ga0126371_119578393	3300021560	Tropical Forest Soil	FATFCRLVWGPPGGFSAVKFDVNLDGKVFYPCPRGT
Ga0126371_122608712	3300021560	Tropical Forest Soil	PCPGKRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFYPCPRGT
Ga0126371_129991641	3300021560	Tropical Forest Soil	FAAFCRAVYAGPLGFSAVKFDVNLDGKVFFPCPRGR
Ga0126371_134217343	3300021560	Tropical Forest Soil	GKRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFYPCPAGT
Ga0213851_14488331	3300021860	Watersheds	GQSCPPKRRFATFCRVVYAPPYGFSAVKFDVNLDGKMFYPCPRGT
Ga0207707_107766341	3300025912	Corn Rhizosphere	GRTFRAYCRRIYDGKNGFAAVKFDVNLDGRTFYPCPRGI
Ga0207693_102364281	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	FATFCRLVWGAPGGFSAVKFDVNLNGKVFYPCPRGA
Ga0207664_109519151	3300025929	Agricultural Soil	CPRKRRFATFCRVVYAPSYGFAAVKFDVNLDGKTFYPCPHGT
Ga0207665_1000027636	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	NPGQSCPPKRRYATFCRIVYAPPYGFAAVKFDVDLNGKMFYPCPRGT
Ga0209006_108517671	3300027908	Forest Soil	LPPPKRRFATFCRVVYAPPDGFSAVKFDVDLNGKMFYPCPRGT
Ga0307281_104048321	3300028803	Soil	VCSHKKSFATYCNVIYGQSYGFAGVKFDVNLDGKTFFPCPSGT
Ga0268241_101965781	3300030511	Soil	KRTFKAFCQAVYAPANGFAAVKFDVNLDGKLFYPCPRGS
Ga0170818_1084314813	3300031474	Forest Soil	GKPCKPGRSFAAYCRRIYGGKNGFAAVKFDVNLDGRVFYPCPRGR
Ga0318534_106256512	3300031544	Soil	ADHYVCNPGQPCPAKRRFATFCRVVYAPSSGFSAVKFDVNLNGKIFYPCPRGT
Ga0318538_102010901	3300031546	Soil	HYVCDPGQPCPAKRRFATFCRLVYAPSYGFTAVKFDVNLDGKIFYPCPRGT
Ga0318538_104581443	3300031546	Soil	ATFCRLVWRPPGGFSAVKFDVNLDGKVFYPCPRGT
Ga0318571_101800121	3300031549	Soil	GQPCPPKRRFATFCRVVYAPPGGFSAVKFDVNLDGKMFFPCPRGS
Ga0310915_100136661	3300031573	Soil	FATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318574_108046492	3300031680	Soil	CNPGQPCPPKRRFATFCRVVYASPGGFSAVKFDVDLNGKMFYPCPRGT
Ga0318496_100497716	3300031713	Soil	ADHYVCNPGQQCQGKRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFNPCPRGT
Ga0318496_106771311	3300031713	Soil	DHYVCDPGQPCPAKRRFATFCRLVYAPSYGFTAVKFDVNLDGRIFYPCPRGT
Ga0318493_100833401	3300031723	Soil	CQGKRRFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318501_104434441	3300031736	Soil	QGKRRFATFCRLVWKAPGGFSAVKFDVNLDGKVFYPCPRGT
Ga0306918_101599931	3300031744	Soil	RSFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318492_107809071	3300031748	Soil	ADHYVCNPGQPCPGKRRFSTFCRVVYAPSYGFTAVKFDVNLDGRTFYPCPHGT
Ga0318494_104391791	3300031751	Soil	GQQCQGKRRFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318526_100466741	3300031769	Soil	RFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318552_103311841	3300031782	Soil	KRRFATFCRVVYAPSYGFAAVKFDVNLDGKTFYPCPHGT
Ga0318548_101121591	3300031793	Soil	GADGYVCNPGQPCQGKRSFATFCRLVWGPPGGFSAVKFDVNLDGKVFYPCPRGT
Ga0318503_100752343	3300031794	Soil	TTFCRVVYAPSYGFAAVKFDVNLDGRFFYPCPHGA
Ga0318576_104752252	3300031796	Soil	PKRRFTTFCRVVYAPSYGFAAVKFDVNLDGRFFYPCPHGA
Ga0318576_105392131	3300031796	Soil	FATFCRVVYAPPGGFSAVKFDVNLDGKMFFPCPRGS
Ga0318550_102136291	3300031797	Soil	HYVCNPGQPCRGRRSFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318565_101682493	3300031799	Soil	CRGRRSFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318567_100527471	3300031821	Soil	VCNPGQQCRGKRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFNPCPRGT
Ga0318499_101872471	3300031832	Soil	GQPCQGKRSFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318517_100633041	3300031835	Soil	GADHYVCNPGQPCTGKRRFVTFCRLVWGPPGGFSAVKFDVNLDGTVFYPCPRGT
Ga0306925_112332903	3300031890	Soil	GKRRFATFCRLVWGAPGGFSAVKFDVNLDGKVFYPCPRGT
Ga0318551_106785941	3300031896	Soil	ADGYVCNPGQQCRGKRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFNPCPRGT
Ga0310909_106813392	3300031947	Soil	TCPPKRRFTTFCRVVYAPSYGFAAVKFDVNLDGRFFYPCPHGA
Ga0310909_113436621	3300031947	Soil	GADHYVCNPGQQCPGKRSFATFCRLVWGPPGGFSAVKFDVNLDGKVFYPCPRGT
Ga0306926_117418233	3300031954	Soil	NPGQQCQGKRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFNPCPRGT
Ga0310911_100934494	3300032035	Soil	GKRSFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0310911_105768372	3300032035	Soil	YGADGYVCNPGQQCQGKRRFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318575_102794141	3300032055	Soil	EDAYVCNPGQPCPGSRSFGAFCRSVYAVPHGFAAVKFDVNLDGRMFDPCP
Ga0318575_102815713	3300032055	Soil	ATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318533_108207982	3300032059	Soil	CDPGKTCPPKRRFTTFCRVVYAPSYGFAAVKFDVNLDGRFFYPCPHGA
Ga0318510_103373771	3300032064	Soil	CNPGQPCTGKRRFVTFCRLVWGPPGGFSAVKFDVNLDGTVFYPCPRGT
Ga0318513_106734131	3300032065	Soil	PGKRRFSTFCRVVYAPSYGFTAVKFDVNLDGRTFYPCPHGT
Ga0318514_101050601	3300032066	Soil	GKRRFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318553_102463481	3300032068	Soil	EYGADHYVCNPGQPCQGKRRFATFCRLVWKAPGGFSAVKFDVNLDGKVFYPCPRGT
Ga0318553_103486612	3300032068	Soil	YGADHYVCNPGQPCPRKRRFTTFCRVVYAPPYGFAAVKFDVNLDGKTFYPCPHGT
Ga0318553_103901061	3300032068	Soil	RRFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0306924_125664172	3300032076	Soil	PGQPCPPKRRFATFCRVVYAPPGGFSAVKFDVNLDGKMFFPCPRGS
Ga0318577_102631741	3300032091	Soil	RRFTTFCRVVYAPSYGFAAVKFDVNLDGRFFYPCPHGA
Ga0318577_102885093	3300032091	Soil	SFATFCRLVWGPPGGFSAIKFDVNLDGKVFYPCPRGT
Ga0318577_104277321	3300032091	Soil	VCNPGQQCQGKRRFATFCRLVWGPPGGFSAVKFDVNLDGKVFNPCPRGT
Ga0307470_107271782	3300032174	Hardwood Forest Soil	SFAAFCRNVYSPAWGFAAVKFDVNLDGRMFYPCPSGI
Ga0306920_1030617741	3300032261	Soil	NPGQPCPRKRRFTTFCRVVYAPPYGFAAVKFDVNLDGKTFYPCPHGT
Ga0306920_1032663612	3300032261	Soil	CPAKRRFATFCRVVYAPSSGFSAVKFDVNLNGKIFYPCPRGT
Ga0318519_109432162	3300033290	Soil	AYVCNPGQPCPGSRSFGAFCRSVYAVPHGFAAVKFDVNLDGRMFDPCP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077269

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences