NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F077238

Metagenome Family F077238

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F077238
Family Type Metagenome
Number of Sequences 117
Average Sequence Length 57 residues
Representative Sequence MTLNNTNPADLSTLDEPSLQTLIDHYLSVREKLPDNLTVRDRLVELQQELLNRTTTNE
Number of Associated Samples 57
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 7.69 %
% of genes near scaffold ends (potentially truncated) 30.77 %
% of genes from short scaffolds (< 2000 bps) 70.94 %
Associated GOLD sequencing projects 34
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (64.957 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(79.487 % of family members)
Environment Ontology (ENVO) Unclassified
(89.744 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(94.872 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 44.19%    β-sheet: 0.00%    Coil/Unstructured: 55.81%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF00940RNA_pol 9.40
PF00145DNA_methylase 2.56
PF04545Sigma70_r4 1.71
PF17212Tube 0.85
PF03906Phage_T7_tail 0.85
PF01844HNH 0.85
PF10991DUF2815 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG5108Mitochondrial DNA-directed RNA polymeraseTranscription [K] 9.40
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 2.56


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A64.96 %
All OrganismsrootAll Organisms35.04 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10014341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. PW14356Open in IMG/M
3300000117|DelMOWin2010_c10042660All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED452077Open in IMG/M
3300001955|GOS2237_1000120Not Available1890Open in IMG/M
3300001960|GOS2230_1016443All Organisms → Viruses → Predicted Viral1640Open in IMG/M
3300006026|Ga0075478_10014687Not Available2659Open in IMG/M
3300006637|Ga0075461_10193806Not Available610Open in IMG/M
3300006752|Ga0098048_1112303Not Available821Open in IMG/M
3300006793|Ga0098055_1029265All Organisms → Viruses → Predicted Viral2291Open in IMG/M
3300006802|Ga0070749_10017535All Organisms → Viruses → Predicted Viral4565Open in IMG/M
3300006802|Ga0070749_10017701All Organisms → Viruses → Predicted Viral4540Open in IMG/M
3300006802|Ga0070749_10023929All Organisms → Viruses → Predicted Viral3849Open in IMG/M
3300006802|Ga0070749_10067059All Organisms → Viruses → Predicted Viral2157Open in IMG/M
3300006802|Ga0070749_10072903Not Available2057Open in IMG/M
3300006802|Ga0070749_10096126All Organisms → Viruses → Predicted Viral1755Open in IMG/M
3300006802|Ga0070749_10097281All Organisms → Viruses → Predicted Viral1743Open in IMG/M
3300006802|Ga0070749_10247373Not Available1011Open in IMG/M
3300006802|Ga0070749_10581570Not Available605Open in IMG/M
3300006810|Ga0070754_10006309Not Available7880Open in IMG/M
3300006810|Ga0070754_10017716Not Available4243Open in IMG/M
3300006810|Ga0070754_10022426All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.3653Open in IMG/M
3300006810|Ga0070754_10039191Not Available2581Open in IMG/M
3300006810|Ga0070754_10096423Not Available1467Open in IMG/M
3300006810|Ga0070754_10102343All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1414Open in IMG/M
3300006810|Ga0070754_10168550Not Available1037Open in IMG/M
3300006810|Ga0070754_10264132Not Available782Open in IMG/M
3300006810|Ga0070754_10297948Not Available724Open in IMG/M
3300006810|Ga0070754_10356828Not Available646Open in IMG/M
3300006868|Ga0075481_10122384Not Available957Open in IMG/M
3300006869|Ga0075477_10021211All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.3011Open in IMG/M
3300006869|Ga0075477_10291111Not Available651Open in IMG/M
3300006869|Ga0075477_10342102Not Available589Open in IMG/M
3300006870|Ga0075479_10101855All Organisms → Viruses → Predicted Viral1192Open in IMG/M
3300006874|Ga0075475_10341664Not Available611Open in IMG/M
3300006916|Ga0070750_10014230All Organisms → Viruses → Predicted Viral4127Open in IMG/M
3300006916|Ga0070750_10063597All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1762Open in IMG/M
3300006916|Ga0070750_10248182Not Available773Open in IMG/M
3300006916|Ga0070750_10269136Not Available735Open in IMG/M
3300006919|Ga0070746_10196521Not Available962Open in IMG/M
3300006919|Ga0070746_10227480Not Available878Open in IMG/M
3300006919|Ga0070746_10402232Not Available613Open in IMG/M
3300006922|Ga0098045_1059285Not Available936Open in IMG/M
3300006922|Ga0098045_1078083Not Available793Open in IMG/M
3300007234|Ga0075460_10047147All Organisms → Viruses → Predicted Viral1627Open in IMG/M
3300007234|Ga0075460_10282468Not Available547Open in IMG/M
3300007344|Ga0070745_1015151All Organisms → Viruses → Predicted Viral3536Open in IMG/M
3300007344|Ga0070745_1102819All Organisms → Viruses → Predicted Viral1116Open in IMG/M
3300007345|Ga0070752_1190127Not Available823Open in IMG/M
3300007345|Ga0070752_1233681Not Available721Open in IMG/M
3300007345|Ga0070752_1307356All Organisms → Viruses603Open in IMG/M
3300007346|Ga0070753_1126170Not Available982Open in IMG/M
3300007346|Ga0070753_1291516Not Available585Open in IMG/M
3300007346|Ga0070753_1330462Not Available540Open in IMG/M
3300007539|Ga0099849_1010201Not Available4214Open in IMG/M
3300007539|Ga0099849_1073182Not Available1396Open in IMG/M
3300007640|Ga0070751_1296648Not Available603Open in IMG/M
3300007640|Ga0070751_1301513Not Available597Open in IMG/M
3300008012|Ga0075480_10116599Not Available1481Open in IMG/M
3300008012|Ga0075480_10209759All Organisms → Viruses → Predicted Viral1025Open in IMG/M
3300008012|Ga0075480_10347493Not Available741Open in IMG/M
3300008012|Ga0075480_10554692Not Available548Open in IMG/M
3300010296|Ga0129348_1127605Not Available887Open in IMG/M
3300017818|Ga0181565_10191284All Organisms → Viruses → Predicted Viral1411Open in IMG/M
3300017818|Ga0181565_10636134Not Available681Open in IMG/M
3300017949|Ga0181584_10645801Not Available637Open in IMG/M
3300017986|Ga0181569_10994416Not Available542Open in IMG/M
3300018049|Ga0181572_10699443Not Available610Open in IMG/M
3300018426|Ga0181566_10898159Not Available600Open in IMG/M
3300018426|Ga0181566_10938353Not Available585Open in IMG/M
3300021373|Ga0213865_10235813Not Available884Open in IMG/M
3300021373|Ga0213865_10485402Not Available530Open in IMG/M
3300021373|Ga0213865_10519599Not Available505Open in IMG/M
3300021957|Ga0222717_10137910Not Available1496Open in IMG/M
3300022065|Ga0212024_1040204Not Available810Open in IMG/M
3300022069|Ga0212026_1077701Not Available505Open in IMG/M
3300022071|Ga0212028_1044912Not Available821Open in IMG/M
3300022158|Ga0196897_1036835Not Available585Open in IMG/M
3300022183|Ga0196891_1025036Not Available1131Open in IMG/M
3300022183|Ga0196891_1072287Not Available615Open in IMG/M
3300022187|Ga0196899_1007782All Organisms → Viruses → Predicted Viral4387Open in IMG/M
3300022187|Ga0196899_1010042Not Available3772Open in IMG/M
3300022187|Ga0196899_1033219All Organisms → Viruses → Predicted Viral1794Open in IMG/M
3300022187|Ga0196899_1078128Not Available1018Open in IMG/M
3300022200|Ga0196901_1279569Not Available509Open in IMG/M
3300023178|Ga0255759_10693457Not Available564Open in IMG/M
3300025083|Ga0208791_1062110Not Available631Open in IMG/M
3300025098|Ga0208434_1061088Not Available801Open in IMG/M
3300025108|Ga0208793_1027570All Organisms → Viruses → Predicted Viral1924Open in IMG/M
3300025610|Ga0208149_1009048All Organisms → Viruses → Predicted Viral3094Open in IMG/M
3300025653|Ga0208428_1061851All Organisms → Viruses → Predicted Viral1113Open in IMG/M
3300025671|Ga0208898_1006112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.6602Open in IMG/M
3300025671|Ga0208898_1012044Not Available4236Open in IMG/M
3300025671|Ga0208898_1013526Not Available3920Open in IMG/M
3300025674|Ga0208162_1035299Not Available1787Open in IMG/M
3300025751|Ga0208150_1079550All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1087Open in IMG/M
3300025759|Ga0208899_1009930All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium5368Open in IMG/M
3300025759|Ga0208899_1012151All Organisms → Viruses → Predicted Viral4700Open in IMG/M
3300025759|Ga0208899_1013720All Organisms → Viruses → Predicted Viral4342Open in IMG/M
3300025759|Ga0208899_1100214All Organisms → Viruses → Predicted Viral1083Open in IMG/M
3300025769|Ga0208767_1032056All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2699Open in IMG/M
3300025769|Ga0208767_1114533Not Available1048Open in IMG/M
3300025771|Ga0208427_1222763Not Available590Open in IMG/M
3300025818|Ga0208542_1000035Not Available41706Open in IMG/M
3300025828|Ga0208547_1094517Not Available931Open in IMG/M
3300025853|Ga0208645_1003385All Organisms → Viruses11841Open in IMG/M
3300025853|Ga0208645_1041075Not Available2289Open in IMG/M
3300025853|Ga0208645_1052308All Organisms → Viruses → Predicted Viral1938Open in IMG/M
3300025853|Ga0208645_1076909All Organisms → Viruses → Predicted Viral1463Open in IMG/M
3300025853|Ga0208645_1080005All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1422Open in IMG/M
3300025853|Ga0208645_1156859Not Available858Open in IMG/M
3300025889|Ga0208644_1213884Not Available826Open in IMG/M
3300025889|Ga0208644_1313198Not Available617Open in IMG/M
3300034374|Ga0348335_007270Not Available6542Open in IMG/M
3300034374|Ga0348335_016708All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.3702Open in IMG/M
3300034375|Ga0348336_051904All Organisms → Viruses → Predicted Viral1680Open in IMG/M
3300034375|Ga0348336_196030Not Available544Open in IMG/M
3300034418|Ga0348337_003720Not Available10593Open in IMG/M
3300034418|Ga0348337_011688All Organisms → Viruses → Predicted Viral4993Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous79.49%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh6.84%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.98%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.56%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.71%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.71%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.85%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001955Marine microbial communities from Gulf of Panama, Panama - GS021EnvironmentalOpen in IMG/M
3300001960Marine microbial communities from South of Charleston, South Carolina, USA - GS014EnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022069Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaGEnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_10014341103300000117MarineMTSTDPSDLSTLDEPSLQTLIDHYLSVAEKLPDNLTVRDRLVELQQELLKRTTTNE*
DelMOWin2010_1004266093300000117MarineMTSTNPSDLSTLDEPSLEHLIQYYLKLKHRMPHNLRVRDRLVELQQELLNRNTTTNEK*
GOS2237_100012033300001955MarineMSESTTNPSDLSTLDEPSLQTLIDHYLRVREKLPDSVTVRDRLVELQQELLNRTNKE*
GOS2230_101644343300001960MarineMTTNPEHLETLDEPSLQTLIDHYLSVQKRLPDNVRVRDRLIELQQELLNRSKEE*
Ga0075478_1001468763300006026AqueousMNNNLTDPSKLETLDDISIQTLIDHYLKLQEQLPTSLRVRDRLVELQQELLNRTTTTNE*
Ga0075461_1019380633300006637AqueousMTDNLTDPSKLETLDDISIQTLIDHYLSVKERLPDNLTVRDRLIELQDELLNRQLNNEE*
Ga0098048_111230333300006752MarineMTTNPEHLETLDEPSLQTLIDHYLSVQKRLPENVRVRDRLIELQQELLNRTNTE*
Ga0098055_102926513300006793MarineKMTTNPEHLETLDEPSLQTLIDHYLSVQKRLPDNVRVRDRLIELQQELLNRTNKE*
Ga0070749_1001753543300006802AqueousMTSTNPEHLSTLDDISIQTLIDHYLTVREKLPDNLTVRDRLVELQQELLNRTTTNE*
Ga0070749_1001770173300006802AqueousMTDNLTDPSKLETLDEPSLQTLIDHYLSVQKRLPDNVRVRDRLIELQQELLNRTTKE*
Ga0070749_1002392963300006802AqueousMTTNPEHLETLDEPSLQTLIDHYLSMKERLPDNLTVRDRLIELQDELLSRQIANQE*
Ga0070749_1006705923300006802AqueousMNNNTNPEHLETLDEPSLQTLIDHYLSVQEKLPENVSVRDRLIELQQELLKRNTTKQ*
Ga0070749_1007290343300006802AqueousMKETTANNTNMTTNPEHLESLDEPSLQTLIDHYLSVREKLPDNLSVRDRLIELQDELLNRQINNEE*
Ga0070749_1009612643300006802AqueousMTTTNPSDLSTLDEPSLQTLIDHYLKLKHQMPDNLSVRDRLVELQQELLNRTNTTNE*
Ga0070749_1009728123300006802AqueousMNMIMTDNLTDPSNLSTLDDISIQTLIDHYLSVAERLPDNLTVRDRLVELQQELLNRTNTTNE*
Ga0070749_1024737333300006802AqueousMNKNTNPEHLETLDDISIQTLIDHYLSVREKLPTSLRVRDRLLELQQELLNRSKEE*
Ga0070749_1058157023300006802AqueousMTLNNTNPADLSTLDEPSLQTLIDHYLSVREKLPDNLTVRDRLVELQQELLNRTTTNE*
Ga0070754_10006309123300006810AqueousMSVSNTDPSNLSTLDEPSLQTLIDHYLSVQEKLPENVSVRDRLIELQQELLKRNTTTNE*
Ga0070754_1001771663300006810AqueousMTKTNPEHLETLDEPSLEHLIQYYLKLKHRMPANLSVRDRLVELQQELLNRTNTNDND*
Ga0070754_1002242643300006810AqueousMNNNLTDPSKLETLDDISNQTLIDHYLKLQEQLPTSLRVRDRLVELQQELLNRTTTTNE*
Ga0070754_1003919143300006810AqueousMTKTNPSDLSTLDEPSLEHLIQYYLKLKHRMPHNLSVRDRLVELQQELLNRTTTTNEK*
Ga0070754_1009642363300006810AqueousMTTNPEHLETLDEPSLQTLIDHYLRVREKLPDNLRVRDRLIELQDELLNRQLNNEE*
Ga0070754_1010234353300006810AqueousMNKNTNPEHLETLDDISIQTLIDHYLRVREKLPDNLRVRDRLIELQDELLNRQLNNEE*
Ga0070754_1016855023300006810AqueousVTSTNPEHLETLDEPSLQTLIDHYLKLKHQMPDNLSVRDRLVELQQELLNRTNTTNE*
Ga0070754_1026413233300006810AqueousMSQPMNKTTDPSDLSTLDDISIQTLIDHYLRVREKLPDNLTIRDRLVELQQELLNRTTTTNE*
Ga0070754_1029794833300006810AqueousMTNNTNPSDLSTLDEPSLQILIDHYLSVREKLPDSVTVRDRLIELQDELLNRQLNNEE**QC*
Ga0070754_1035682833300006810AqueousMNNNLTDPSKLETLDEPSLQTLIDHYLRVREKLPDSVTVRDRLIELQDELLNRQ
Ga0075481_1012238433300006868AqueousMTSTNPSDLSTLDEPSLEHLIQYYLKLKHRMPHNLRVRDRLVELQQELLNRTNKE*
Ga0075477_1002121163300006869AqueousMNKTTNPSDLSTLDEPSLQTLIDHYLSVKERLPDNITVRDRLVELQQELLNRTNTNE*
Ga0075477_1029111113300006869AqueousATNPEHLETLDEPSLQTLIDHYLSVKQKLPDSVSVRDRLIELQDELLNRQIEREKQA*
Ga0075477_1034210233300006869AqueousMTLNNLTDPSKLETLDDISIQTLIDHYLRVREKLPDNITVRDRLVELQQELLNRTNTNE*
Ga0075479_1010185553300006870AqueousPIKMTKTNPSDLSTLDEPSLEHLIQYYLKLKHRMPANLSVRDRLVELQQELLNRTNKE*
Ga0075475_1034166413300006874AqueousLYNFTTQYLMTNNTNPSKLETLDEPSLQTLIDHYLSVREKLPDSVTVRDRLIELQDELLNRQLNNEE*
Ga0070750_1001423073300006916AqueousMTSTNPSDLSTLDEPSLQTLIDHYLSVREKLPDNLTVRDRLVELQQELLNRTTTTNE*
Ga0070750_1006359713300006916AqueousMNNNLTDPSKLETLDDISIQTLIDHYLKLQEQLPTSLRVRDRLVELQQELLNRTT
Ga0070750_1024818223300006916AqueousMKENTANNINMTTNPEHLETLDEPSLQTLIDHYLSMKERLPDNLTVRDRLIELQDELLSRQIANQE**
Ga0070750_1026913633300006916AqueousMNNNLTDPSKLETLDEPSLQTLIDHYLSVREKLPTSLRVRDRLLELQQELLKRTNTTNE*
Ga0070746_1019652123300006919AqueousMTKTNPSDLSTLDEPSLEHLIQYYLKLKHRMPANLSVRDRLVELQQELLNRTNKE*
Ga0070746_1022748033300006919AqueousMSVATTNPSDLSTLDEPSLQTLIDHYLSVAQKLPDSVSVRDRLIELQDELLNRQIER
Ga0070746_1040223233300006919AqueousMNNNLTDPSKLETLDEPSLQTLIDHYLKLKHQMPDNLSVRERLVEL*
Ga0098045_105928513300006922MarineMTTNPEHLETLDEPSLQTLIDHYLSVQKRLPDNVRVRDRLIELQQELLNRTNKE*
Ga0098045_107808313300006922MarineRTFLKPKMTTNPEHLETLDEPSLQTLIDHYLRVREKLPDSVTVRDRLIELQDELLNRQLNNEE*
Ga0075460_1004714773300007234AqueousMTLNNTNPEHLETLDEPSLQTLIDHYLRVREKLPDSVTVRDRLIELQDELLNRQLNNEE*
Ga0075460_1028246813300007234AqueousMNDNLTDPSKLETLDDISIQTLIDHYLSVKERLPDNLTVRDRLIELQDELLNRQLNNEE*
Ga0070745_101515113300007344AqueousSTNPEHLETLDEPSLQTLIDHYLKLKHQMPDNLSVRDRLVELQQELLNRTNTTNE*
Ga0070745_110281943300007344AqueousMTTNPSDLSTLDDISIQTLIDHYLSVREKLPDSVTVRDRLIELQDELLNRQLNNEE*
Ga0070752_119012713300007345AqueousMNKTTDPSKLETLDDISIQTLIDHYLRVLEKLPDSVRVRDRLVELQQELLSRKPV
Ga0070752_123368123300007345AqueousMTNNTNPSDLSTLDEPSLQILIDHYLSVREKLPDSVTVRDRLIELQDELLNRQLNNEE*
Ga0070752_130735613300007345AqueousTNNTNPSDLSTLDEPSLQILIDHYLSVREKLPTSLRVRDRLLELQQELLKRTNKE*
Ga0070753_112617023300007346AqueousMNKNTNPEHLETLDEPSLQTLIDHYLKLKHQMPDNLSVRDRLVELQQELLNRTNTTNE*
Ga0070753_129151623300007346AqueousMTLNNTDPSDLSTLDEPSLQTLIDHYLSVKERLPDSVTVRDRLIELQDELLNRQIEREKQA*
Ga0070753_133046223300007346AqueousMTNNTNPSKLETLDEPSLQTLIDHYLSVREKLPDSVTVRDRLIELQDELLNRQLNNEE*
Ga0099849_101020193300007539AqueousMTLNNTNPEHLETLDEPSLQTLIDHYLTVREKLPDSVRVRDRLIELQDELLNRQVEREN*
Ga0099849_107318213300007539AqueousMTTTDPSDLSTLDEPSLQTLINHYLSVAQKLPDNLRVRDRLVELQQELLNRTNKETS*
Ga0070751_129664813300007640AqueousTNPEHLETLDEPSLQTLIDHYLRVREKLPDNLRVRDRLIELQDELLNRQLNNEE*
Ga0070751_130151313300007640AqueousMTSTNPEHLSTLDEPSLQTLIDHYLKLKHQMPDNLSVRDRLVELQQELLNR
Ga0075480_1011659943300008012AqueousMTKTNPFDLSTLDEPSLEHLIQYYLKLKHRMPHNLSVRDRLVELQQELLNRTTTTNEK*
Ga0075480_1020975933300008012AqueousMSVATTDPSDLSTLDEPSLQTLIDHYLRVLEKLPDSVRVRDRLVELQQELLSRKPVS
Ga0075480_1034749323300008012AqueousLTDPSNLETLDEPSLQTLIDHYLSVKQKLPDSVSVRDRLIELQDELLNRTNTNE*
Ga0075480_1055469223300008012AqueousMTTNPEHLETLDDISIQTLIDHYLKLQEQLPTSLRVRDRLLELQQELLSRQPSTIEG
Ga0129348_112760543300010296Freshwater To Marine Saline GradientMTTNPEHLETLDEPSLEHLIQYYLKLKHRMPANLSVRDRLIELQDEL
Ga0181565_1019128453300017818Salt MarshMTTNPEHLESLDDISIQTLIDHYLKLQEQLPTSLRVRDRLLELQQELLNRTNKE
Ga0181565_1063613433300017818Salt MarshLETLDDISIQTLIDHYLSVREKLPTSLRVRDRLLELQQELLNRTTTNE
Ga0181584_1064580123300017949Salt MarshVNTNPSDLSTLDEPSLQTLIDHYLSVKERLPDNLRVRDRLIELQDELLSRQLANQEX
Ga0181569_1099441623300017986Salt MarshMTLNNTNPADLSTLDDISIQTLIDHYLKLQEQLPTSLRVRDRLLELQQELLNRNTTTNEI
Ga0181572_1069944313300018049Salt MarshMTTNPEHLESLDDISIQTLIDHYLKLQEQLPTSLRVRDRLLELQQELLNRT
Ga0181566_1089815913300018426Salt MarshMNKTTDPSDLSTLDDISIQTLIDHYLKLQEQLPTSLRVRDRLLELQQELLNRNTTTNEI
Ga0181566_1093835333300018426Salt MarshMTSTNPEHLETLDEPSLQTLIDHYLSVQKRLPDNVRVRDRLIELQQELLKRTNTTNE
Ga0213865_1023581333300021373SeawaterMSVTPTNPSDLSTLDEPSLQTLIDHYLSVKQKLPDSVSVRDRLIELQDELLNRQIEREKQ
Ga0213865_1048540233300021373SeawaterMTSTNPSDLSTLDDISIQTLIDHYLRVREKLPDNLTVRDRLIELQDELLNRTLKA
Ga0213865_1051959913300021373SeawaterDLSTLDDISIQTLIDHYLRVREKLPDNLTVRDRLIELQDELLNRQLNNEE
Ga0222717_1013791013300021957Estuarine WaterMTKTNPSDLSTLDEPSLEHLIQYYLKLKHRMPHNLRVRDRLIELQDELLKRTTTTNEK
Ga0212024_104020423300022065AqueousMTSTNPEHLSTLDDISIQTLIDHYLTVREKLPDNLTARDRLVELQQELLNRTTTNE
Ga0212026_107770133300022069AqueousMNNNLTDPSKLETLDDISIQTLIDHYLRVREKLPTSLRVRDRLLELQQEL
Ga0212028_104491213300022071AqueousMNNNLTDPSKLETLDDISIQTLIDHYLKLQEQLPTSLRVRDRLVELQQELLNRTTTTNE
Ga0196897_103683513300022158AqueousMTLNNTNPSDLSTLDEPSLQTLIDHYLSVREKLPTSLRVRDRLLELQQELLSRQPS
Ga0196891_102503633300022183AqueousTLNNTNPEHLETLDDISIQTLIDHYLSVREKLPTSLRVRDRLLELQQELLNRSKEE
Ga0196891_107228723300022183AqueousMTSTNPEHLSTLDDISIQTLIDHYLTVREKLPDNLTVRDRLVELQQELLNRTTTNE
Ga0196899_100778273300022187AqueousMNKTTNPSDLSTLDEPSLQTLIDHYLSVKERLPDNITVRDRLVELQQELLNRTNTNE
Ga0196899_101004243300022187AqueousMTKTNPEHLETLDEPSLEHLIQYYLKLKHRMPANLSVRDRLVELQQELLNRTNTNDND
Ga0196899_103321913300022187AqueousPSDLSTLDEPSLQTLIDHYLRVREKLPDNLTVRDRLVELQQELLNRTTTTNE
Ga0196899_107812813300022187AqueousMTSTNPSDLSTLDDISIQTLIDHYLSVQQKLPDNVRVRDRLIELQQELLNRTNTTNE
Ga0196901_127956913300022200AqueousMTLNNTNPEHLETLDEPSLQTLIDHYLTVREKLPDSVRVRDRLIELQDELLNRQVEREN
Ga0255759_1069345713300023178Salt MarshMKETTANNINMTTNPEHLESLDDISIQTLIDHYLSVREKLPTSLRVRDRLLELQQELLSRQPS
Ga0208791_106211033300025083MarineMTTNPEHLETLDEPSLQTLIDHYLSVQKRLPDNVRVRDRLIELQQELLNRTNKE
Ga0208434_106108833300025098MarineMTTNPEHLETLDEPSLQTLIDHYLKLKHQMPDNLTVRDRLVELQQELLNRTNTTNE
Ga0208793_102757063300025108MarineMTTNPEHLETLDEPSLQTLIDHYLKLKHQMPDNLTVRDRLVELQQELLN
Ga0208149_100904833300025610AqueousMTKTNPSDLSTLDEPSLEHLIQYYLKLKHRMPHNLSVRDRLVELQQELLNRTTTTNEK
Ga0208428_106185133300025653AqueousVMNTTMTDNLTDPSNLETLDEPSLQTLIDHYLSVKQKLPDSVSVRDRLIELQDELLNRQIEREKQA
Ga0208898_1006112103300025671AqueousMSQPMNKTTDPSDLSTLDDISIQTLIDHYLRVREKLPDNLTIRDRLVELQQELLNRTTTTNE
Ga0208898_101204443300025671AqueousVTSTNPEHLETLDEPSLQTLIDHYLKLKHQMPDNLSVRDRLVELQQELLNRTNTTNE
Ga0208898_101352683300025671AqueousMTSTNPSDLSTLDDISIQTLIDHYLSVQKRLPDNVRVRDRLIELQQELLNRTNTTNE
Ga0208162_103529933300025674AqueousMTTNPEHLETLDEPSLQTLIDHYLSMKERLPDNLTVRDRLIELQDELLSRQIANQE
Ga0208150_107955053300025751AqueousMTDNLTDPSKLETLDDISIQTLIDHYLRVREKLPDNITVRDRLVELQQELLNRTNTNE
Ga0208899_1009930113300025759AqueousMNKNTNPEHLETLDDISIQTLIDHYLSVREKLPTSLRVRDRLLELQQELLNRSKEE
Ga0208899_101215143300025759AqueousMTDNLTDPSKLETLDEPSLQTLIDHYLSVQKRLPDNVRVRDRLIELQQELLNRTTKE
Ga0208899_101372063300025759AqueousMNNNTNPEHLETLDEPSLQTLIDHYLSVQEKLPENVSVRDRLIELQQELLKRNTTKQ
Ga0208899_110021443300025759AqueousMNNNTNPEHLETLDDISIQTLIDHYLSVAQKLPDNLTVRDRLVELQQELLKRNNTTNE
Ga0208767_103205683300025769AqueousMTLNNTNPSDLSTLDEPSLQTLIDHYLRVREKLPTSLRVRDRLLELQQELLSRQPSTIEG
Ga0208767_111453323300025769AqueousVSEATTNPSDLSTLDEPSLQTLIDHYLRVREKLPTSLRVRDRLLELQQELLNRTNTTNE
Ga0208427_122276333300025771AqueousMTLNNLTDPSKLETLDDISIQTLIDHYLRVREKLPDNITVRDRLVELQQELLNRTNTNE
Ga0208542_1000035263300025818AqueousMTLNNTNPEHLETLDEPSLQTLIDHYLRVREKLPDSVTVRDRLIELQDELLNRQLNNEE
Ga0208547_109451713300025828AqueousMTSTDPSDLSTLDEPSLKTLIDHYLRVRENLPDNLRVRDRLVELQQELLSRKPVSTIEGV
Ga0208645_1003385103300025853AqueousMSVSNTDPSNLSTLDEPSLQTLIDHYLSVQEKLPENVSVRDRLIELQQELLKRNTTTNE
Ga0208645_104107513300025853AqueousMTTNPEHLETLDEPSLQTLIDHYLRVREKLPDNLRVRDRLIELQDELLNRQLNNEE
Ga0208645_105230823300025853AqueousMTSTNPSDLSTLDEPSLQTLIDHYLKLKHQMPDNLSVRDRLVELQQELLNRTNKE
Ga0208645_107690943300025853AqueousPSDLSTLDEPSLQTLIDHYLSVKQKLPDSVSVRDRLIELQDELLNRQIEREKQA
Ga0208645_108000513300025853AqueousMNKNTNPEHLETLDDISIQTLIDHYLRVREKLPDNLRVRDRLIELQDELLNRQLNNEE
Ga0208645_115685913300025853AqueousMTNNTNPSDLSTLDEPSLQILIDHYLSVREKLPDSVTVRDRLIELQDELLNRQLNNEE
Ga0208644_121388423300025889AqueousMTTNPEHLESLDEPSLQTLIDHYLSVREKLPDNLSVRDRLIELQDELLNRQINNEE
Ga0208644_131319813300025889AqueousMTDNLTDPSDLSTLDDISIQTLIDHYLSVREKLPTSLRVRDRLLELQQELL
Ga0348335_007270_3291_34643300034374AqueousMTSTNPEHLETLDEPSLQTLIDHYLKLKHQMPDNLSVRDRLVELQQELLNRTNTTNE
Ga0348335_016708_95_2833300034374AqueousMSQPMNKTTDPSDLSTLDEPSLQTLIDHYLRVREKLPDNLTVRDRLVELQQELLNRTTTTNE
Ga0348336_051904_1524_16793300034375AqueousSDLSTLDDISIQTLIDHYLRVREKLPDNLTIRDRLVELQQELLNRTTTTNE
Ga0348336_196030_286_4863300034375AqueousMTLNNTNPSDLSTLDEPSLQTLIDHYLKLKNQMPDNLSVRDRLVELQQELLKRTLKANNRTNTTNE
Ga0348337_003720_10431_105923300034418AqueousMTKTNPEHLETLDEPSLEHLIQYYLKLKHRMPANLSVRDRLVELQQELLNRTNT
Ga0348337_011688_4179_43553300034418AqueousMNNNTNPEHLETLDEPSLQILIDHYLKLKHQMPDNLSVRDRLVELQQELLNRTTTTNE


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