Metagenome / Metatranscriptome Family F077209

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077209
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	63 residues
Representative Sequence	MSSEGSEQMLSLLKELAVFKAMDQDYRAGPKGRVETEAYGERERRRQEIKQEMQELAAESKGGPS
Number of Associated Samples	65
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.25 %
% of genes near scaffold ends (potentially truncated)	19.66 %
% of genes from short scaffolds (< 2000 bps)	64.10 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (41.026 % of family members)
Environment Ontology (ENVO)	Unclassified (37.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (81.197 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.14% β-sheet: 0.00% Coil/Unstructured: 40.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.2.14.1: DnaK suppressor protein DksA, alpha-hairpin domain	d1tjla1	1tjl	0.86416
a.238.1.1: BAR domain	d2d4ca1	2d4c	0.8366
a.26.1.1: Long-chain cytokines	d1i1rb_	1i1r	0.81111
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.80721
a.7.7.1: BAG domain	d1t7sa_	1t7s	0.80415

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00882	Zn_dep_PLPC	11.11
PF09335	SNARE_assoc	3.42
PF05532	CsbD	2.56
PF13439	Glyco_transf_4	2.56
PF00196	GerE	1.71
PF04015	DUF362	1.71
PF07994	NAD_binding_5	0.85
PF12710	HAD	0.85
PF13340	DUF4096	0.85
PF08240	ADH_N	0.85
PF07589	PEP-CTERM	0.85
PF00589	Phage_integrase	0.85
PF02666	PS_Dcarbxylase	0.85
PF00665	rve	0.85
PF01609	DDE_Tnp_1	0.85
PF00282	Pyridoxal_deC	0.85
PF04255	DUF433	0.85
PF04041	Glyco_hydro_130	0.85
PF00072	Response_reg	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	3.42
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	3.42
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	3.42
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	2.56
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	1.71
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.85
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.85
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.85
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.85
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.85
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.85
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.85
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.85
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.85
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.85
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.85
COG1260	Myo-inositol-1-phosphate synthase	Lipid transport and metabolism [I]	0.85
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.43 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	33.33 %
Unclassified	root	N/A	30.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	32.48 %
Unclassified	root	N/A	30.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21.37 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	10.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	10.26 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	10.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.85 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.85 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	10.26 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	10.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
Silvibacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium dinghuense	0.85 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.85 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	10.26 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	10.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
Silvibacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium dinghuense	0.85 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.85 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12681168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1076	Open in IMG/M
3300000789\|JGI1027J11758_12715908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	769	Open in IMG/M
3300002347\|JGIcombinedJ26865_1003423	Not Available	2758	Open in IMG/M
3300003218\|JGI26339J46600_10001809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6665	Open in IMG/M
3300003218\|JGI26339J46600_10013511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2381	Open in IMG/M
3300003219\|JGI26341J46601_10003761	All Organisms → cellular organisms → Bacteria → Acidobacteria	4999	Open in IMG/M
3300003219\|JGI26341J46601_10014272	All Organisms → cellular organisms → Bacteria → Acidobacteria	2604	Open in IMG/M
3300003219\|JGI26341J46601_10042785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1440	Open in IMG/M
3300003219\|JGI26341J46601_10079489	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium dinghuense	981	Open in IMG/M
3300003219\|JGI26341J46601_10214256	Not Available	520	Open in IMG/M
3300003368\|JGI26340J50214_10005130	All Organisms → cellular organisms → Bacteria → Acidobacteria	4251	Open in IMG/M
3300003368\|JGI26340J50214_10036988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1414	Open in IMG/M
3300003369\|JGI24140J50213_10033503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1886	Open in IMG/M
3300003369\|JGI24140J50213_10213005	Not Available	600	Open in IMG/M
3300004080\|Ga0062385_10064259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1647	Open in IMG/M
3300004080\|Ga0062385_10564103	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300004091\|Ga0062387_100878198	Not Available	676	Open in IMG/M
3300004091\|Ga0062387_101057190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	626	Open in IMG/M
3300004091\|Ga0062387_101130960	Not Available	609	Open in IMG/M
3300004092\|Ga0062389_100365091	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1547	Open in IMG/M
3300004092\|Ga0062389_100429861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1449	Open in IMG/M
3300004092\|Ga0062389_101141286	All Organisms → cellular organisms → Bacteria → Acidobacteria	965	Open in IMG/M
3300004092\|Ga0062389_101775946	Not Available	797	Open in IMG/M
3300004104\|Ga0058891_1364312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	781	Open in IMG/M
3300004152\|Ga0062386_100513185	Not Available	974	Open in IMG/M
3300004152\|Ga0062386_100548418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	942	Open in IMG/M
3300004152\|Ga0062386_100778170	Not Available	788	Open in IMG/M
3300004152\|Ga0062386_100852388	Not Available	752	Open in IMG/M
3300004152\|Ga0062386_100881988	Not Available	739	Open in IMG/M
3300004152\|Ga0062386_100905693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	729	Open in IMG/M
3300004152\|Ga0062386_101207350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	629	Open in IMG/M
3300004152\|Ga0062386_101402896	Not Available	582	Open in IMG/M
3300005921\|Ga0070766_10006954	All Organisms → cellular organisms → Bacteria	5741	Open in IMG/M
3300005938\|Ga0066795_10258046	Not Available	515	Open in IMG/M
3300006052\|Ga0075029_100067997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2089	Open in IMG/M
3300006052\|Ga0075029_100317137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	998	Open in IMG/M
3300006052\|Ga0075029_100620064	Not Available	724	Open in IMG/M
3300006055\|Ga0097691_1043786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1615	Open in IMG/M
3300006642\|Ga0075521_10001153	All Organisms → cellular organisms → Bacteria	8514	Open in IMG/M
3300006642\|Ga0075521_10156347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1071	Open in IMG/M
3300009029\|Ga0066793_10117580	All Organisms → cellular organisms → Bacteria → Acidobacteria	1546	Open in IMG/M
3300009616\|Ga0116111_1000666	All Organisms → cellular organisms → Bacteria	27180	Open in IMG/M
3300009637\|Ga0116118_1032279	Not Available	1915	Open in IMG/M
3300010339\|Ga0074046_10026389	All Organisms → cellular organisms → Bacteria	3998	Open in IMG/M
3300010339\|Ga0074046_10029601	All Organisms → cellular organisms → Bacteria	3744	Open in IMG/M
3300010339\|Ga0074046_10363814	Not Available	879	Open in IMG/M
3300010339\|Ga0074046_10529414	Not Available	702	Open in IMG/M
3300010341\|Ga0074045_10012997	All Organisms → cellular organisms → Bacteria → Acidobacteria	6813	Open in IMG/M
3300010341\|Ga0074045_10510733	Not Available	772	Open in IMG/M
3300010379\|Ga0136449_100442189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2285	Open in IMG/M
3300010379\|Ga0136449_101229849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300010379\|Ga0136449_101805764	Not Available	915	Open in IMG/M
3300010379\|Ga0136449_102221154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	799	Open in IMG/M
3300014164\|Ga0181532_10198762	Not Available	1176	Open in IMG/M
3300017931\|Ga0187877_1065648	Not Available	1598	Open in IMG/M
3300017935\|Ga0187848_10017448	All Organisms → cellular organisms → Bacteria	3857	Open in IMG/M
3300017943\|Ga0187819_10101209	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300017943\|Ga0187819_10779810	Not Available	537	Open in IMG/M
3300018001\|Ga0187815_10256860	Not Available	739	Open in IMG/M
3300018022\|Ga0187864_10429695	Not Available	564	Open in IMG/M
3300018040\|Ga0187862_10252984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1131	Open in IMG/M
3300020581\|Ga0210399_10185433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1728	Open in IMG/M
3300021405\|Ga0210387_10508238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1071	Open in IMG/M
3300021407\|Ga0210383_10011368	All Organisms → cellular organisms → Bacteria → Acidobacteria	7559	Open in IMG/M
3300022524\|Ga0224534_1065336	Not Available	700	Open in IMG/M
3300025427\|Ga0208077_1046979	Not Available	607	Open in IMG/M
3300025474\|Ga0208479_1002066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	4032	Open in IMG/M
3300025475\|Ga0208478_1000784	All Organisms → cellular organisms → Bacteria	10278	Open in IMG/M
3300025482\|Ga0208715_1053423	Not Available	733	Open in IMG/M
3300025496\|Ga0208191_1112476	Not Available	548	Open in IMG/M
3300025527\|Ga0208714_1007149	All Organisms → cellular organisms → Bacteria	2984	Open in IMG/M
3300025579\|Ga0207927_1069605	Not Available	856	Open in IMG/M
3300025604\|Ga0207930_1005765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3854	Open in IMG/M
3300025604\|Ga0207930_1068230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	855	Open in IMG/M
3300025650\|Ga0209385_1003663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	6620	Open in IMG/M
3300027394\|Ga0209904_1001847	Not Available	1714	Open in IMG/M
3300027432\|Ga0209421_1020420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1275	Open in IMG/M
3300027698\|Ga0209446_1001117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6263	Open in IMG/M
3300027783\|Ga0209448_10061975	All Organisms → cellular organisms → Bacteria → Acidobacteria	1258	Open in IMG/M
3300027783\|Ga0209448_10070985	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300027812\|Ga0209656_10000734	All Organisms → cellular organisms → Bacteria	21260	Open in IMG/M
3300027812\|Ga0209656_10012287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5377	Open in IMG/M
3300027812\|Ga0209656_10014975	All Organisms → cellular organisms → Bacteria	4823	Open in IMG/M
3300027812\|Ga0209656_10016871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4511	Open in IMG/M
3300027812\|Ga0209656_10026720	All Organisms → cellular organisms → Bacteria → Acidobacteria	3468	Open in IMG/M
3300027812\|Ga0209656_10173625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1062	Open in IMG/M
3300027812\|Ga0209656_10388860	Not Available	627	Open in IMG/M
3300027812\|Ga0209656_10442292	Not Available	576	Open in IMG/M
3300027824\|Ga0209040_10001761	All Organisms → cellular organisms → Bacteria	17114	Open in IMG/M
3300027824\|Ga0209040_10033611	All Organisms → cellular organisms → Bacteria	3218	Open in IMG/M
3300027824\|Ga0209040_10046143	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300027824\|Ga0209040_10085036	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300027825\|Ga0209039_10008087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6601	Open in IMG/M
3300027825\|Ga0209039_10030807	All Organisms → cellular organisms → Bacteria → Acidobacteria	2590	Open in IMG/M
3300027825\|Ga0209039_10040584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2170	Open in IMG/M
3300027825\|Ga0209039_10043365	Not Available	2083	Open in IMG/M
3300027825\|Ga0209039_10045500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2019	Open in IMG/M
3300027825\|Ga0209039_10096718	All Organisms → cellular organisms → Bacteria → Acidobacteria	1271	Open in IMG/M
3300027825\|Ga0209039_10147997	All Organisms → cellular organisms → Bacteria → Acidobacteria	979	Open in IMG/M
3300027889\|Ga0209380_10009436	All Organisms → cellular organisms → Bacteria	5720	Open in IMG/M
3300028646\|Ga0302159_10000548	All Organisms → cellular organisms → Bacteria	8619	Open in IMG/M
3300028736\|Ga0302214_1041910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	935	Open in IMG/M
3300028906\|Ga0308309_10013110	All Organisms → cellular organisms → Bacteria	5247	Open in IMG/M
3300029984\|Ga0311332_10089956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2212	Open in IMG/M
3300030019\|Ga0311348_10175965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1592	Open in IMG/M
3300030339\|Ga0311360_10348694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1194	Open in IMG/M
3300031057\|Ga0170834_107145064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	770	Open in IMG/M
3300031231\|Ga0170824_116477449	Not Available	1245	Open in IMG/M
3300031235\|Ga0265330_10133739	Not Available	1055	Open in IMG/M
3300031238\|Ga0265332_10068553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1512	Open in IMG/M
3300031521\|Ga0311364_10187883	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300031595\|Ga0265313_10010952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5679	Open in IMG/M
3300031708\|Ga0310686_102047407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1320	Open in IMG/M
3300032160\|Ga0311301_10604314	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300032160\|Ga0311301_11459615	Not Available	847	Open in IMG/M
3300032160\|Ga0311301_11587012	Not Available	798	Open in IMG/M
3300033887\|Ga0334790_000220	All Organisms → cellular organisms → Bacteria	59991	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.44%
Host-Associated	Host-Associated	2.56%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	52.99%
Terrestrial	Environmental → Terrestrial	44.44%
Plants	Host-Associated → Plants	2.56%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	50.43%
Soil	Environmental → Terrestrial → Soil	37.61%
Peat	Environmental → Terrestrial → Peat	6.84%
Sediment	Environmental → Aquatic → Sediment	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	50.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.84%
Loam	Environmental → Terrestrial → Soil → Loam	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.56%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	45.30%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	12.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.27%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.71%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	41.03%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	12.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	5.13%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.71%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300027394	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3D	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_2	Environmental	Open in IMG/M
3300028736	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_126811683	3300000789	Soil	VSGEGSEAMLNLLKELSVYKVMDEDDRARPMGRSETEAHADRERRRQTIKQEMHXLAAESENDPX*
JGI1027J11758_127159083	3300000789	Soil	VSGEGSEAMLNLLKELSVYKVMDEDDRARPMGRSETEAHADRERRRQTIKQEMHKLAAESENDPA*
JGIcombinedJ26865_10034231	3300002347	Arctic Peat Soil	MLILLKELSVYKAMDEDYGAGLKGRAEEEAYKERERRRQEIKQEMHNLAAGSKSDPV*
JGI26339J46600_100018095	3300003218	Bog Forest Soil	MSSDGSEQMMGLLKELSVYKAMDEDYSAGPKXPVETEAHEERERRRREVKLEMQAVAAENKINPT*
JGI26339J46600_100135114	3300003218	Bog Forest Soil	MSNDASNEMLSLLKELSVYKAMDEEYRAGARSRLESEAYEERERRRLKITQEMHNLAAEKTNHRTE*
JGI26341J46601_100037619	3300003219	Bog Forest Soil	MSSEASNEMLSLLKELSVYRVMDEEYTAGAKGRLELEAYEQRERRRQVIKQEMHSLAVEKKDDPA*
JGI26341J46601_100142724	3300003219	Bog Forest Soil	MSSDASNEMLSLLKELSVYKAMDEEYNAGARGRLESEAYEERERRRPKTTQEMHDLAAEIKNDRT*
JGI26341J46601_100427851	3300003219	Bog Forest Soil	MSSERSEQMLTLLKELSVYKALDGDYEAGAKGAAETEAYEGRERRRQEIKQEMQELATQSKNGPA*
JGI26341J46601_100794891	3300003219	Bog Forest Soil	MSSEGSEQMLTLLQELSVYKALDGDYKDSPKSRAETEAYEERERRRQEIKQEMQKLAAESTNGPT*
JGI26341J46601_102142561	3300003219	Bog Forest Soil	LKELSVYKALDGDYKDGPKSRAETEAYEERERRRQEIKQEMQKLAAESTNSPT*
JGI26340J50214_100051304	3300003368	Bog Forest Soil	MSSDASNEMLSLLKELSVYKAMDEEYNAGARGRLESEAYEERERRRPKITQEMHDLAAEIKNDRT*
JGI26340J50214_100369882	3300003368	Bog Forest Soil	MSSERSEQMLTLLKELSVYKALDGDYEAGAKGEAETEAYEGRERRRQEIKQEMQELATQSKNGPA*
JGI24140J50213_100335033	3300003369	Arctic Peat Soil	MSREGSEQMLSLLKELAVFKAMDQDYRAGPKGRVETEAYGERERRRQEIKQEMQQLAAESKGGPS*
JGI24140J50213_102130052	3300003369	Arctic Peat Soil	MSSEGSEQMLSLLKELAVFKAMDQDYRAGPKGQAETEACGERERRRQEIKQEMQELAAESKGGPS*
Ga0062385_100642594	3300004080	Bog Forest Soil	MLTLLKELSVYKALDGDYKAGPKGRAETEAYEARERRRREIKQEMQELATESKNGPA*
Ga0062385_105641031	3300004080	Bog Forest Soil	MSREGSEQMLTLLKELSVYKALDGDYEAGTKGEAETEAYDERERRRQEIKQEMQDLATQSRNGPA*
Ga0062387_1008781981	3300004091	Bog Forest Soil	MSDEGSEQMLTLLKELSVYKALDGDYKAGPKGRAETEAYEARERRRREIKQEMQELATESKNGPA*
Ga0062387_1010571903	3300004091	Bog Forest Soil	VSSEASIEMLSLLKELSVYKAMDEDYRAGAKGRVEAEAYEERERRRQEIKQEM
Ga0062387_1011309602	3300004091	Bog Forest Soil	MLSLLKELSVFKTLDEEYQAGAKGPTESEAHRERERRRLAIKQEMHELAAESKRGLS*
Ga0062389_1003650912	3300004092	Bog Forest Soil	MNSEASNEMLSLLKELSVYRVMEEEYGAGAKGRMESEAYEQRERRRQEIKQEMRGLAAEKKDDPA*
Ga0062389_1004298611	3300004092	Bog Forest Soil	MSSEGSAIMLSLLKELSVFKTLDEEYQAGAKGPTESEAHRERERRRLAIKQEMHELAAESKRGLS*
Ga0062389_1011412863	3300004092	Bog Forest Soil	MSREGSEQMLTLLKELSVYKALDGAYNAGPKGRAEIEAYEERERRRQGIKQEMQDLATESKKSPA*
Ga0062389_1017759461	3300004092	Bog Forest Soil	GGRMSREGSEQMLTLLKELSVYKALDGDYEAGTKGEAETEAYDERERRRQEIKQEMQDLATQSRNGPA*
Ga0058891_13643123	3300004104	Forest Soil	MSSEASNEMLNLLKELSVYKAMDNDYGAGVKGRVEAEAHEERERRRQEIIREMHKLAADKKNSSS*
Ga0062386_1005131851	3300004152	Bog Forest Soil	MQRMSKRPAILIETTYFHKGGRMSSDGSEQMLGLLKELSVYKALDEDDRAGPRGRVETQAHEDRERRRQEIKQEMQELAAGSKSHPS*
Ga0062386_1005484182	3300004152	Bog Forest Soil	MSSERSEQMMGLLQELFVYTAMDEDYSAGPKGRVETEAYDERERRRQEITQDMHRLAAENKTDPLPDVGGAIGGQS*
Ga0062386_1007781702	3300004152	Bog Forest Soil	MSSEGSEQMLTLLKELSVYKALDEDFRAGPRDPVETQSYEERGRRRQEIKQEMQELAAENKSHPA*
Ga0062386_1008523881	3300004152	Bog Forest Soil	LDGDYKDSPKSRAETEAYEERERRRQEIKQEMQKLAAESTNGPT*
Ga0062386_1008819882	3300004152	Bog Forest Soil	MLSLLKELSVYKAMDEDYRAGAKGRVEAEAYEERERRRQEIKQEIHNLAAESNNTPA*
Ga0062386_1009056933	3300004152	Bog Forest Soil	MSSDGSEQMMGLLKELSVYKAMDEDYSAGPKGPVETEAHEERERRRREVKLEMQAVAAENKINPT*
Ga0062386_1012073501	3300004152	Bog Forest Soil	MSSEGSENMLTLLKELSVYKTLDGDYEAGAKGEAQTEAYEERKRRRQEIKQEMQELATQSKN
Ga0062386_1014028962	3300004152	Bog Forest Soil	MSCEGSEQMLALLKELSVYKALDGDYNASPEGQAETEAYGERERRRQEIKQEMQDLATESKKSPA*
Ga0070766_100069548	3300005921	Soil	MSSEASNEMLSLLKELSVYKAMDEDYRAGAQGRMEAEAFDERERRRLEINLEIQNLAAESKKELF*
Ga0066795_102580462	3300005938	Soil	MSSEGSELMLGLLKELSVFKTMDEDYSAGPKGPVETEAYEERERRRQGIKQEMQKLAAESKSHPS*
Ga0075029_1000679974	3300006052	Watersheds	MSGDASNEMLNLLKELSVYKALDQEYWAGAKGRIESEAHEDRERRRLEIKQEMRDLAPKSKNSPV*
Ga0075029_1003171372	3300006052	Watersheds	MSSEESEQMLTLLKELSVYKALDGGYEAGPKSRAETEAYEERERRRQDIKQEMQELATESKNRPA*
Ga0075029_1006200642	3300006052	Watersheds	MSSDESNAMLSLLKELSVYKTLDEECIAGAKGGVEAAACEDRERRRLEIKQEMHALVADSKSDRD*
Ga0097691_10437862	3300006055	Arctic Peat Soil	MSSEGSEQMLSLLKELAVFKAMDQDYRAGPKGRVETEAYGERERRRQEIKQEMQELAAESKGGPS*
Ga0075521_100011535	3300006642	Arctic Peat Soil	MSSEGCEKMLGLLKELSVYNAMDEDYGGGTKDPVKTEAYKERERRRQEIKQEMQKLAAENKGHPS*
Ga0075521_101563473	3300006642	Arctic Peat Soil	MSSEGSEAMLILLKELSVYKAMDEDYGAGLKGRAEEEAYKERERRRQEIKQEMHNLAAGSKSDPV*
Ga0066793_101175803	3300009029	Prmafrost Soil	MLGLLKELSVFKTMDEDYRAGAKGPVETEAYEMRERRRQEIKQEMQTLAAENKSHPS*
Ga0116111_100066611	3300009616	Peatland	MLGLLKELPIFKTMDEDYSAGPKGVETAAYEERERRRQEIKQEMQMLAAESKSHPS*
Ga0116118_10322792	3300009637	Peatland	MSSKGSEQMLGLLKELSVFKSMDEDYSTGPKDQAETEAYEKRERRRQEIKLKMQTLATESKSHPS*
Ga0074046_100263891	3300010339	Bog Forest Soil	MSSEGSEQMLTLLKELSVYKALDGDYKDGPKSRAETEAYEERERRRQEIKQEMQKLAAESTNSPT*
Ga0074046_100296014	3300010339	Bog Forest Soil	MSSDASNEMLSLLKELSVYKAFDEDYRAGAKDRMETEAYEARDRRRLEIKQEMHNLAIERKGDLP*
Ga0074046_103638142	3300010339	Bog Forest Soil	MRSEGSEQMLTLLKELFVYKALDGDYKAGPKGRAETEAYEERERRRQEIKQEMQELATESKNGSA*
Ga0074046_105294141	3300010339	Bog Forest Soil	MSSEGSEQMLTLLKELSVYKALDGDYKDSPKSRAETEAYEERERRRQEIKQEMQKLAAESTNGPT*
Ga0074045_100129979	3300010341	Bog Forest Soil	MSSDASNEMLSLLKELSVYKAFDEDYRAGAKDRTETEAYEARDRRRLEIKQEMHNLAIERKGDLP*
Ga0074045_105107332	3300010341	Bog Forest Soil	MSSDGSEQMMGLLKELSVYKAMDEDYTAGPKGRVETAAHDERERRRREIQVEMHALAAQNKINPT*
Ga0136449_1004421894	3300010379	Peatlands Soil	MLTLLKELSVYKAMDEDYKAGAKGRVEAEAYEERERRRQEIKQEMDDLAAESKKGLS*
Ga0136449_1012298492	3300010379	Peatlands Soil	MSSEASNEMLSLLKELSVYRVMDEEYGAGAKGRMESEAYEQRERRRQEIKQEMHSLAAEKKDDPA*
Ga0136449_1018057642	3300010379	Peatlands Soil	SELMLGLLKELPIIKTMDEDYSAGPKGVETAAYEERERRRQEIKQEMQMLAAESKSHPS*
Ga0136449_1022211541	3300010379	Peatlands Soil	MSSEASNEMLSFLKELSVYRVVDEEYGAGAKGWMKSEAYEQRERRRQEIKREMHSLAAEKKDDPA*
Ga0181532_101987621	3300014164	Bog	MSSEGSEQMLTLLKELSVYKALDGDYKAGPNGRAETEAYEERERRRQKIKQEMQELATETKNGSA*
Ga0187877_10656482	3300017931	Peatland	MSSEGSELMLGLLKELPIFKTMDEDYSAGPKGVETAAYEERERRRQEIKQEMQMLAAESKSHPS
Ga0187848_100174486	3300017935	Peatland	MSSKGSEQMLGLLKELSVFKSMDEDYSTGPKDQAETEAYEKRERRRQEIKLKMQTLATESKSHPS
Ga0187819_101012093	3300017943	Freshwater Sediment	CKLFGRGRMSSEGSEQMLTLLKELSVYKALDGDYKAGHKDPAETEAYEERERRRQDIKQEMQELATESKNGPA
Ga0187819_107798102	3300017943	Freshwater Sediment	MSREGSEQMLTLLKELSVYKALDGDYEDGPKSRAETEAYEERERRRQDIKQEMQELAT
Ga0187815_102568601	3300018001	Freshwater Sediment	EGSEQMLTLLKELSVYKALDGDYKAGHKGPAETEAYEERERRRHEIKQEMQELATESKNGPA
Ga0187864_104296951	3300018022	Peatland	MSSKGSEQMLGLLKELSVFKSMDEDYSTGPKDQAETEAYEKRERRRQEIK
Ga0187862_102529842	3300018040	Peatland	SVFKSMDEDYSTGPKDQAETEAYEKRERRRQEIKLKMQTLATESKSHPS
Ga0210399_101854333	3300020581	Soil	MSSEASNEMLNLLKELSVYKAMDNDYGAGVKGRVEAEAHEERERRRQEIIREMHKLAADKRNSSS
Ga0210387_105082381	3300021405	Soil	MSSEASNEMLNLLKELSVYKAMDNDYGAGVKGRVEAEAHEERERRRQEIIREMHKLAADKKNSSS
Ga0210383_1001136810	3300021407	Soil	MSSEGSAIMLSLLKELSVFKALDEEYQAGAKDPAESEAHREREQRRLAIKYEMRDLAAESKRGPS
Ga0224534_10653363	3300022524	Soil	MSREGSEQMLSLLKELAVFKVMDQDYRAGPKGRVETQAYGEHERRRQEIRQEMQQLAAESKGGPF
Ga0208077_10469792	3300025427	Arctic Peat Soil	MSSERSDAMLILLKELSVYKAMDEDYGAGLKGRAEEEAYKERERRRQEIKQEMHNLAAGSKSDPV
Ga0208479_10020666	3300025474	Arctic Peat Soil	MLILLKELSVYKAMDEDYGAGLKGRAEEEAYKERERRRQEIKQEMHNLAAGSKSDPV
Ga0208478_10007844	3300025475	Arctic Peat Soil	MSSEGSEAMLILLKELSVYKAMDEDYGAGLKGRAEEEAYKERERRRQEIKQEMHNLAAGSKSDPV
Ga0208715_10534232	3300025482	Arctic Peat Soil	MSSEGSEQMLSLLKELAVFKAMDQDYRAGPKGRVETEAYGERERRRQEIKQEMQELAAESKGGPS
Ga0208191_11124762	3300025496	Peatland	MSSKGSEQMLGLLKELSVFKSMDEDYSTGPKDQAETEAYEKRERRRQEIKLKMQTLATES
Ga0208714_10071491	3300025527	Arctic Peat Soil	MSREGSEQMLSLLKELAVFKAMDQDYRAGPKGRVETEAYGERERRRQEIKQEMQQLAAESKGGPS
Ga0207927_10696053	3300025579	Arctic Peat Soil	MSSEGSEQMLSLLKELAVFKAMDQDYRAGPKGQAETEACGERERRRQEIKQEMQELAAESKGGPS
Ga0207930_10057654	3300025604	Arctic Peat Soil	MSSEGSEQMLSLLKELAVFKAMDQDYRAGPKGRVETEAYGERERRRQEIKQEMQQLAAESKGGPS
Ga0207930_10682301	3300025604	Arctic Peat Soil	MLILLKELSVYKAMDEDYGAGLKGRKEAEPYKERERRRQEIKQEMHNLAAGSKSDPA
Ga0209385_10036636	3300025650	Arctic Peat Soil	MSSEGCEKMLGLLKELSVYNAMDEDYGGGTKDPVKTEAYKERERRRQEIKQEMQKLAAENKGHPS
Ga0209904_10018472	3300027394	Thawing Permafrost	MSSEGSEQMLGLLKELSVYNAMDEDYSAGPKGRVETEAYEVRERRRQEIKQEMQTLAAENKSHPS
Ga0209421_10204201	3300027432	Forest Soil	MSSEGSEKMLGLLKELCVYNAMDEDYGGGTKDPVETEAYKEREQRRQEIKQEIRQEMQ
Ga0209446_10011171	3300027698	Bog Forest Soil	ELIEPTYFHKGGRMSAEGSEQMLTLLKELSVYKALDGDYKAGPKGRAETEAYEARERRRREIKQEMQELATESKNGPA
Ga0209448_100619751	3300027783	Bog Forest Soil	MLTLLKELSVYKALDGDYKAGPKGRAETEAYEARERRRREIKQEMQELATESKNGPA
Ga0209448_100709852	3300027783	Bog Forest Soil	MNSEASNEMLSLLKELSVYRVMEEEYGAGAKGRMESEAYEQRERRRQEIKQEMRGLAAEKKDDPA
Ga0209656_1000073431	3300027812	Bog Forest Soil	MSSDASNEMLSLLKELSVYKAMDEEYNAGARGRLESEAYEERERRRPKITQEMHDLAAEIKNDRT
Ga0209656_100122873	3300027812	Bog Forest Soil	MSSERSEQMLTLLKELSVYKALDGDYEAGAKGEAETEAYEGRERRRQEIKQEMQELATQSKNGPA
Ga0209656_100149754	3300027812	Bog Forest Soil	MSNDASNEMLSLLKELSVYKAMDEEYRAGARSRLESEAYEERERRRLKITQEMHNLAAEKTNHRTE
Ga0209656_100168715	3300027812	Bog Forest Soil	MSSEGSEQMLTLLQELSVYKALDGDYKDSPKSRAETEAYEERERRRQEIKQEMQKLAAESTNGPT
Ga0209656_100267201	3300027812	Bog Forest Soil	MSSEASNEMLSLLKELSVYRVMDEEYTAGAKGRLELEAYEQRERRRQVIKQEMHSLAVEKKDDPA
Ga0209656_101736253	3300027812	Bog Forest Soil	MSSEGSEQMLTLLKELSVYKALDGDYKDGPKSRAETEAYEERERRRQEIKQEMQKLAAESTNSPT
Ga0209656_103888601	3300027812	Bog Forest Soil	MLSLLKELSVYKAMDEDYRAGAKGRVEAEAYEERERRRQEIKQEIHNLAAESNNTPA
Ga0209656_104422922	3300027812	Bog Forest Soil	MLTLLKELFVYKALDGDYKAGPKGRAETEAYEERERRRQEIKQEMQELATESK
Ga0209040_1000176121	3300027824	Bog Forest Soil	MSSERSEQMLTLLKELSVYKALDGDYEAGAKGAAETEAYEGRERRRQEIKQEMQELATQSKNGPA
Ga0209040_100336113	3300027824	Bog Forest Soil	MLTLLKELFVYKALDGDYKAGPKGRAETEAYEERERRRQEIKQEMQELATESKNGSA
Ga0209040_100461432	3300027824	Bog Forest Soil	MSSEASNEMLSLLKELSVYKVMDEEYRAGAKGRMESEAYEQRERRRQEIKQEMHSLAVEKKDDPA
Ga0209040_100850363	3300027824	Bog Forest Soil	SEQMLTLLKELSVYKALDGDYKAGPNGRAETEAYEERERRRQEIKQEMQELATESKNGSA
Ga0209039_100080878	3300027825	Bog Forest Soil	MSSDGSEQMMGLLKELSVYKAMDEDYSAGPKGPVETEAHEERERRRREVKLEMQAVAAENKINPT
Ga0209039_100308074	3300027825	Bog Forest Soil	MSNDASNEMLSLLKELSVYKAMDEEYRAGARGRLESEAYEERERRRLKITQEMHNLAAEKTNHRTE
Ga0209039_100405842	3300027825	Bog Forest Soil	MSSEGSEQMLTLLKELSVYKALDGDYKDSPKSRAETEAYEERERRRQEIKQEMQKLAAESKNGPT
Ga0209039_100433654	3300027825	Bog Forest Soil	MSSEASEQMMGLLQELSVYKAMDKDYGAGPKGRVETEAYEERERRRQEITQHMHRLAAESKSDPPPDICDAMGGQS
Ga0209039_100455002	3300027825	Bog Forest Soil	MSSDASNEMLSLLKELSVYKAFDEDYRAGAKDRMETEAYEARDRRRLEIKQEMHNLAIERKGDLP
Ga0209039_100967183	3300027825	Bog Forest Soil	MSSDASNEMLSLLKELSVYKAMDEEYNAGARGRLESEAYEERERRRPKTTQEMHDLAAEIKNDRT
Ga0209039_101479971	3300027825	Bog Forest Soil	MSCEGSEQMLALLKELSVYKALDGDYNASPEGQAETEAYGERERRRQEIKQEMQDLATESKKSPA
Ga0209380_100094366	3300027889	Soil	MSSEASNEMLSLLKELSVYKAMDEDYRAGAQGRMEAEAFDERERRRLEINLEIQNLAAESKKELF
Ga0302159_1000054811	3300028646	Fen	MSREKSDAMLILLKELSVYKAMDQDYGAGLKSRVDAEAYKERERRRQEIKQEMRNLAAGSKSDPA
Ga0302214_10419101	3300028736	Fen	MSREKSDAMLILLKELSVYKAMDQDYGAGLKSRVDAEAYKERERRRQEIKQEMRNLAAGSKSDP
Ga0308309_1001311012	3300028906	Soil	SNEMLSLLKELSVYKAMDEDYRAGAQGRMEAEAFDERERRRLEINLEIQNLAAESKKELF
Ga0311332_100899562	3300029984	Fen	MLILLMELSVYKAMDKDYGAGLKGRVEAEAYRERERRRQEIKQEMHNLAAGSKSDPG
Ga0311348_101759651	3300030019	Fen	MSREGSDAMLILLMELSVYKAMDKDYGAGLKGRVEAEAYRERERRRQEIKQEMHNLAAGSKSDPG
Ga0311360_103486941	3300030339	Bog	SALGATQPQLVGRMSREGSDAMLILLMELSVYKAMDKDYGAGLKGRVEAEAYRERERRRQEIKQEMHNLAAGSKSDPG
Ga0170834_1071450643	3300031057	Forest Soil	MSSEASNEMLNLLKELSVYKAMDDDYRAGVKGRVEAEAHEERERRRQEIIQEMHKLAADRRNSSS
Ga0170824_1164774493	3300031231	Forest Soil	MSSEASNEMLNLLKELSVYKAMDDDYRAGVKGRVEAEAHEERERRRQEIIQAMHKLAADRKNSSS
Ga0265330_101337392	3300031235	Rhizosphere	MSSEGSEQMLGLLQELSVFKAMDEEYSSGPKSCVEKEAHQRRERRRQEITQEMQTLAAQSKNSLS
Ga0265332_100685532	3300031238	Rhizosphere	MSSEGSEQMLGLLQELSVFKAMDEEYSSGPKSCVEKEAHQRRERRRQEITQEMQTLAAQSKSSLS
Ga0311364_101878834	3300031521	Fen	LLMELSVYKAMDKDYGAGLKGRVEAEAYRERERRRQEIKQEMHNLAAGSKSDPG
Ga0265313_100109524	3300031595	Rhizosphere	MSSEGSEQMLGLLQELSVFKAMDEEYNSGPQSGVETEAHQRRERRRQEITQEMQTLAAQSKNSLS
Ga0310686_1020474071	3300031708	Soil	MRSENSEQMLGLLKELSVYKAMDEEYTGGAKSEPETEAYKVRERRRQEIRQEMQELATESKRAPS
Ga0311301_106043142	3300032160	Peatlands Soil	MSSEASNEMLSLLKELSVYRVMDEEYGAGAKGRMESEAYEQRERRRQEIKREMHSLAAEKKDDPA
Ga0311301_114596151	3300032160	Peatlands Soil	SELMLGLLKELPIIKTMDEDYSAGPKGVETAAYEERERRRQEIKQEMQMLAAESKSHPS
Ga0311301_115870121	3300032160	Peatlands Soil	VSSEGSKAMLSLLKELSVYKAMDEDYKAGAKGRVEAEAYEERERRRQEIKQEMDDLAAESKKGLS
Ga0334790_000220_9804_9977	3300033887	Soil	MLSLLKELAVFKVMDQDYRAGPKGRVETQAYGEHERRRQEIRQEMQQLAAESKGGPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077209

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences