Metagenome / Metatranscriptome Family F077160

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077160
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	65 residues
Representative Sequence	MLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVANGSSLQPRL
Number of Associated Samples	82
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.23 %
% of genes near scaffold ends (potentially truncated)	25.64 %
% of genes from short scaffolds (< 2000 bps)	72.65 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.470 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (54.701 % of family members)
Environment Ontology (ENVO)	Unclassified (47.863 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.120 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.57% β-sheet: 26.09% Coil/Unstructured: 54.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00072	Response_reg	39.32
PF04075	F420H2_quin_red	20.51
PF01554	MatE	11.97
PF02322	Cyt_bd_oxida_II	2.56
PF01434	Peptidase_M41	0.85
PF07244	POTRA	0.85
PF00809	Pterin_bind	0.85
PF01654	Cyt_bd_oxida_I	0.85
PF02525	Flavodoxin_2	0.85
PF00356	LacI	0.85
PF00924	MS_channel	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	2.56
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.85
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.47 %
Unclassified	root	N/A	14.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.47 %
Unclassified	root	N/A	14.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.47 %
Unclassified	root	N/A	14.53 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.51 %
Unclassified	root	N/A	14.53 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	11.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.82 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	11.97 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.82 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	11.97 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.71 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.82 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	11.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.71 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.82 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	11.97 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.71 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001089\|JGI12683J13190_1000182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7564	Open in IMG/M
3300001593\|JGI12635J15846_10129107	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300002245\|JGIcombinedJ26739_100904976	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300004120\|Ga0058901_1491524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300005176\|Ga0066679_10704125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	654	Open in IMG/M
3300005435\|Ga0070714_101005618	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005436\|Ga0070713_101003365	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	805	Open in IMG/M
3300005454\|Ga0066687_10157764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1206	Open in IMG/M
3300005454\|Ga0066687_10415032	Not Available	781	Open in IMG/M
3300005545\|Ga0070695_100084273	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300006028\|Ga0070717_10149439	All Organisms → cellular organisms → Bacteria	2020	Open in IMG/M
3300006755\|Ga0079222_10018508	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2738	Open in IMG/M
3300006893\|Ga0073928_10000934	All Organisms → cellular organisms → Bacteria	60576	Open in IMG/M
3300007265\|Ga0099794_10035517	All Organisms → cellular organisms → Bacteria	2353	Open in IMG/M
3300007788\|Ga0099795_10100931	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300007788\|Ga0099795_10375755	Not Available	640	Open in IMG/M
3300007788\|Ga0099795_10502592	Not Available	565	Open in IMG/M
3300009038\|Ga0099829_10255156	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300009089\|Ga0099828_10474251	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1129	Open in IMG/M
3300009143\|Ga0099792_10156391	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300009143\|Ga0099792_10683829	Not Available	662	Open in IMG/M
3300010159\|Ga0099796_10099726	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300010159\|Ga0099796_10272075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300011120\|Ga0150983_11974299	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300011120\|Ga0150983_13177109	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300011120\|Ga0150983_15089395	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300011269\|Ga0137392_10128468	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300012189\|Ga0137388_10018291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5200	Open in IMG/M
3300012202\|Ga0137363_10006752	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7153	Open in IMG/M
3300012202\|Ga0137363_10105937	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300012202\|Ga0137363_10705468	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	854	Open in IMG/M
3300012202\|Ga0137363_11739146	Not Available	516	Open in IMG/M
3300012205\|Ga0137362_10532489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1015	Open in IMG/M
3300012361\|Ga0137360_11387689	Not Available	605	Open in IMG/M
3300012582\|Ga0137358_10019388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4362	Open in IMG/M
3300012582\|Ga0137358_10024321	All Organisms → cellular organisms → Bacteria	3925	Open in IMG/M
3300012582\|Ga0137358_10316973	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300012683\|Ga0137398_10020897	All Organisms → cellular organisms → Bacteria	3554	Open in IMG/M
3300012685\|Ga0137397_11297459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012917\|Ga0137395_10218416	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300012922\|Ga0137394_10764489	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012922\|Ga0137394_11631483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012923\|Ga0137359_10065280	All Organisms → cellular organisms → Bacteria	3177	Open in IMG/M
3300012923\|Ga0137359_10233155	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300012923\|Ga0137359_10691691	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300012923\|Ga0137359_11142640	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300012923\|Ga0137359_11775568	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300012924\|Ga0137413_10743156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300012924\|Ga0137413_11004763	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	654	Open in IMG/M
3300012925\|Ga0137419_10103637	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300012927\|Ga0137416_10808400	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	829	Open in IMG/M
3300012927\|Ga0137416_11526412	Not Available	607	Open in IMG/M
3300012929\|Ga0137404_10259933	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300012944\|Ga0137410_10228399	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300015051\|Ga0137414_1075550	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1665	Open in IMG/M
3300015051\|Ga0137414_1174980	All Organisms → cellular organisms → Bacteria	4355	Open in IMG/M
3300015051\|Ga0137414_1258937	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300015054\|Ga0137420_1280871	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1309	Open in IMG/M
3300015054\|Ga0137420_1323793	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300015241\|Ga0137418_10061864	All Organisms → cellular organisms → Bacteria	3425	Open in IMG/M
3300015242\|Ga0137412_10009796	All Organisms → cellular organisms → Bacteria → Acidobacteria	7698	Open in IMG/M
3300015245\|Ga0137409_10063618	All Organisms → cellular organisms → Bacteria	3464	Open in IMG/M
3300015264\|Ga0137403_10027158	All Organisms → cellular organisms → Bacteria → Acidobacteria	6078	Open in IMG/M
3300018468\|Ga0066662_11330245	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	738	Open in IMG/M
3300020140\|Ga0179590_1172013	Not Available	594	Open in IMG/M
3300020170\|Ga0179594_10117258	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300020199\|Ga0179592_10234384	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300020199\|Ga0179592_10238320	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300020579\|Ga0210407_10172453	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1674	Open in IMG/M
3300020582\|Ga0210395_11079904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300020583\|Ga0210401_10171453	All Organisms → cellular organisms → Bacteria	2024	Open in IMG/M
3300021086\|Ga0179596_10486320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300021088\|Ga0210404_10088371	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300021168\|Ga0210406_10397043	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300021171\|Ga0210405_10015384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6314	Open in IMG/M
3300021178\|Ga0210408_10136960	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300021178\|Ga0210408_11359187	Not Available	537	Open in IMG/M
3300021404\|Ga0210389_10486385	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300021559\|Ga0210409_10831349	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300024288\|Ga0179589_10073070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1348	Open in IMG/M
3300024288\|Ga0179589_10082377	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300024288\|Ga0179589_10324467	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300026320\|Ga0209131_1000257	All Organisms → cellular organisms → Bacteria	38544	Open in IMG/M
3300026322\|Ga0209687_1146763	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300026481\|Ga0257155_1085883	Not Available	514	Open in IMG/M
3300026555\|Ga0179593_1014367	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300026555\|Ga0179593_1022629	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300026557\|Ga0179587_10540880	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300027512\|Ga0209179_1015668	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1412	Open in IMG/M
3300027587\|Ga0209220_1034401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1358	Open in IMG/M
3300027591\|Ga0209733_1007058	All Organisms → cellular organisms → Bacteria	2906	Open in IMG/M
3300027605\|Ga0209329_1148068	Not Available	516	Open in IMG/M
3300027635\|Ga0209625_1042852	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1010	Open in IMG/M
3300027651\|Ga0209217_1007318	All Organisms → cellular organisms → Bacteria	3664	Open in IMG/M
3300027663\|Ga0208990_1002895	All Organisms → cellular organisms → Bacteria → Acidobacteria	5432	Open in IMG/M
3300027669\|Ga0208981_1113616	Not Available	691	Open in IMG/M
3300027671\|Ga0209588_1232512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300027875\|Ga0209283_10234699	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1217	Open in IMG/M
3300027903\|Ga0209488_10095289	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300027903\|Ga0209488_10444310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300028047\|Ga0209526_10565922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300028536\|Ga0137415_10254208	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300030730\|Ga0307482_1175561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300030730\|Ga0307482_1253680	Not Available	553	Open in IMG/M
3300030730\|Ga0307482_1321605	Not Available	502	Open in IMG/M
3300030991\|Ga0073994_12328752	Not Available	997	Open in IMG/M
3300031718\|Ga0307474_10589111	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300031718\|Ga0307474_11635726	Not Available	505	Open in IMG/M
3300031718\|Ga0307474_11648080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300031753\|Ga0307477_10094177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2080	Open in IMG/M
3300031754\|Ga0307475_10033996	All Organisms → cellular organisms → Bacteria	3727	Open in IMG/M
3300031754\|Ga0307475_10466019	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300031823\|Ga0307478_10032842	All Organisms → cellular organisms → Bacteria	3756	Open in IMG/M
3300031962\|Ga0307479_10279925	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300031962\|Ga0307479_11066245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300032174\|Ga0307470_10047318	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300032174\|Ga0307470_11014278	Not Available	661	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.15%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.15%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.91%
Loam	Environmental → Terrestrial → Soil → Loam	16.24%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	54.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12683J13190_10001827	3300001089	Forest Soil	MVSAAYDILKKDAANLVWIEAVHDLETAKSRAKELAASSQGEYVIFDQRTRKIVANFSTQNARL*
JGI12635J15846_101291073	3300001593	Forest Soil	MLCAAYDILKKEAATLVWVEASFDLESAMLRVKELVANSDDEYVIFDQRTRQIIASGTSPSTCA*
JGIcombinedJ26739_1009049761	3300002245	Forest Soil	SAAYDILKKDAAELIWLEAAFDLESAKSRVKEIAAGSDGEYVIFDQRTRRIVASFGAPSARI*
Ga0058901_14915242	3300004120	Forest Soil	MLCAAYDILRKDATGMVWVEAVHDLETARSRVQELVAASDEEYVIFDQRSRKIIPVGTAPSARLKNQASI*
Ga0066679_107041252	3300005176	Soil	MLCAAYDILRKNATDMVWVEAVHDLEAAKLRVKELVSRSDEEYVIFDQRTRKIVANGSS
Ga0070714_1010056182	3300005435	Agricultural Soil	MGSGSMENQERMLSAAYDILKKDAAELVWLEAAHDLETAKSRVKEIAAQSDGEYVIFDQRTRRIVASFIASKAHGPE*
Ga0070713_1010033651	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLCAAYDILRKDATDIVWVEAVHDLEAAKSRVKELAARSNEEYVIYDQRARRIVADGSSPR*
Ga0066687_101577643	3300005454	Soil	MLCAAYDILRKNATDMVWVEAVHDLEAAKLRVKELVSRSDEEYVIFDQRTRKIVANGSSLQPRL*
Ga0066687_104150322	3300005454	Soil	MLCAAYDILRKDATDMVWVEAVHDLETAKSRVQELAARSEEEYVIFDQRTRKIVANGSSFQPLL*
Ga0070695_1000842732	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLSPAFDILLKRDASDVVWIEAASDLEAAKSRVRELAASCQGEYVIFDQRTRKVVAEFCSSNAII*
Ga0070717_101494392	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLSAAYDILKKDAAELVWLEAAYDLETAKSRMKELAARGDGEYVIFDQRMRRIVASFTAPSARI*
Ga0079222_100185082	3300006755	Agricultural Soil	MLSAAYDILLKKNAEDVIWVEVAHDLESAKSRVEELAARSHGEYVIFDQRARKIVAQFSPRKVHL*
Ga0073928_100009347	3300006893	Iron-Sulfur Acid Spring	MLSAAYDILKKDAAELIWLEAAFDLESAKSRVKEIAAGSDGEYVIFDQRTRRIVASFGAPSARI*
Ga0099794_100355171	3300007265	Vadose Zone Soil	MLCAAYDILRKDATGMVWVEAVHDLEAAKSRVKELADGSEKEYVIFDQRTRKIVANGSSPKPRL*
Ga0099795_101009312	3300007788	Vadose Zone Soil	MLCAAYDILRKDATHMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVAIGHSLQPRQ*
Ga0099795_103757552	3300007788	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLETAKSRVQELAARSEEEYVIFDQRTRKIVANGSSHQARL*
Ga0099795_105025921	3300007788	Vadose Zone Soil	MGPDLKRKTNTEMLCAAYDILRKNATDMVWVEAVHDLEAAKLRVKELASGSDEEYVIFDQRTRKIVANGSSLRPRL*
Ga0099829_102551561	3300009038	Vadose Zone Soil	MGLRFKEENEYRMLCAAYDILRKDATDMVWVEAVHDLEAAKSRVKELAFASDEEYVIFDQRTRRIVAIG
Ga0099828_104742511	3300009089	Vadose Zone Soil	MGLRFKEENEYRMLCAAYDILRKDTTDMVWVESVHDLEAAKSRVKELASASDEEYVIFDQRTRRIV
Ga0099792_101563912	3300009143	Vadose Zone Soil	MGPDLKRKTNTEMLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVANGSSLQPRL*
Ga0099792_106838291	3300009143	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLETAKSRVQELAAGSDEEYVIFDQRTRKIVANGSSLQPRL*
Ga0099796_100997262	3300010159	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLETAKSRVQELAARSEEEYVIFDQRTRKIVANGSSHQPRL*
Ga0099796_102720752	3300010159	Vadose Zone Soil	MGPDLKRKTNTEMLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVANGSSLRPRL*
Ga0150983_119742992	3300011120	Forest Soil	WVEASSDLENARLRVKELGAPNSRDEYVIFDQRTRRIIANGCSPNICA*
Ga0150983_131771092	3300011120	Forest Soil	MLSAAYDILKKDAAELVWLEAAHDLEAAKSRVKELAARASGEYVIYDQRTRRIVASFIAPSAQA*
Ga0150983_150893953	3300011120	Forest Soil	MLCAAYDILRKDATDMVWVEAVHDLETARSRVQELVAASDEEYLIFDQRSRKIIPDGTAPSARLKNQASI*
Ga0137392_101284683	3300011269	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKSRVKELASASDEEYVIFDQRTRRIVAIGSSLSPRP*
Ga0137388_100182914	3300012189	Vadose Zone Soil	MGLRFKEENEYRMLCAAYDILRKDATDMVWVEAVHDLEAAKSRVKELASASDEEYVIFDQRTRRIVAIGSSLNPRL*
Ga0137363_100067524	3300012202	Vadose Zone Soil	MLSAAYDILRKDAAELVWLEAAYDLETAKSRVKEIAARSDGEYVIFDQRSRRIVASFTAPSARA*
Ga0137363_101059373	3300012202	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELAARSDEEYVIFDQRTRKIVANGSPLQPRL*
Ga0137363_107054682	3300012202	Vadose Zone Soil	MLSAAYDILRKDATAMVWVEAVHDLETAKSRVQELAAGSDEEYVIFDQRTRKIVANGSSL
Ga0137363_117391461	3300012202	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKSRVKELADGSEKEYVIFDQRTRKIVANG
Ga0137362_105324892	3300012205	Vadose Zone Soil	MGPHLKRKTNTEMLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVANGSSLQPRP*
Ga0137360_113876891	3300012361	Vadose Zone Soil	MLSAAYDILRKDATDMVWVEAVHDLETAKSRVQELAAGSDEEYVIFDQRTRKIVANGSSL
Ga0137358_100193882	3300012582	Vadose Zone Soil	MDPVGFTGNKERMLSAAYDILKKDAAELVWLEAAYDLETAKSRVKELAARGDGEYVIFDQRTRRIVASFTAPSARI*
Ga0137358_100243214	3300012582	Vadose Zone Soil	MLSAAYDILKKDAAEMVWLEAAYDLETAKSRVKELAASSDGEYVIFDQRTRRIVASFTAPSARV*
Ga0137358_103169733	3300012582	Vadose Zone Soil	EMGPDLKRKTNTEMLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVANGSSLQPRL*
Ga0137398_100208974	3300012683	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLETAKSRVQELAARSDEEYVIFDQRTRKIVANGTSL
Ga0137397_112974591	3300012685	Vadose Zone Soil	HRPEMGPDLKRKTNTEMLCAAYDILRKDATHMVWVEAVHDLETAKLRVKELASRSDEEYVIFDQRTRKIVATGHSLQPGL*
Ga0137395_102184163	3300012917	Vadose Zone Soil	CAAYDILSKNATDMVWVEAVHDLEAAKLRVKELASGSDEEYVIFDQRTRKIVANGSSLRPRL*
Ga0137394_107644892	3300012922	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVATGHSLQPGL*
Ga0137394_116314831	3300012922	Vadose Zone Soil	ILRKDATHMVWVEAVHDLEAAKLRVKELASGSDEEYVIFDQRTRKIVANGSSLQPGL*
Ga0137359_100652803	3300012923	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKSRVKELADGSEKEYVIFDQRTRKIVANGSSLKPRL*
Ga0137359_102331553	3300012923	Vadose Zone Soil	MLSAAYDILRKDAAELVWLEAAYDLETAKSRVKEIAARSDGEYVIFDQRTRRIVASFTASRVQG*
Ga0137359_106916911	3300012923	Vadose Zone Soil	MLSAAYDILKKDAAELVWLEAAYDLETAKSRVKELAARGDGEYVIFDQRTRRIVASFTAPSARI*
Ga0137359_111426402	3300012923	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKSRVKELASRSDEEYVIFDQRTRKIVAIGHSLQPRQ*
Ga0137359_117755682	3300012923	Vadose Zone Soil	MLCAAYDILRKDATHMVWVEAVHDLETAKLRVKELASGSDEEYVIFDQRTR
Ga0137413_107431562	3300012924	Vadose Zone Soil	MGPDLKRKTNTEMLCAAYDILRKNATDMVWVEAVHDLEAAKLRVKELASGSDEEYVIFDQRTRKIVANGSSLQPRL*
Ga0137413_110047632	3300012924	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLETAKSRVQELAARSDEEYVIFDQRARKIVANGSSHQPRL*
Ga0137419_101036373	3300012925	Vadose Zone Soil	MENQERMLSAAYDILKKDSAELVWLEAAHDLETAKSRVKEIAARSDGEYVIFDQRTRRIVASFNASKAQL*
Ga0137416_108084002	3300012927	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKSRVKQLADGSEKEYVIFDQRTRKIVANGSSPKPRL*
Ga0137416_115264121	3300012927	Vadose Zone Soil	MLCAAYDILRKDETDMVWVEAVHDLETAKSRVQELAAGSDEEYVIFDQRTRKI
Ga0137404_102599333	3300012929	Vadose Zone Soil	CAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVANGSSLQPRP*
Ga0137410_102283991	3300012944	Vadose Zone Soil	MLCAAYDILRKDATHMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVEIGHSLQPRQ*
Ga0137414_10755503	3300015051	Vadose Zone Soil	MLCAAYDILRKDATHMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRRIVAIGHSL
Ga0137414_11749807	3300015051	Vadose Zone Soil	MGPDLKRGKLIQKCLRAYDILRKNATDMVWVEAVHDLEAAKLRVKELASGSDEEYVIFDQRTRKIVANGSSLRPRL*
Ga0137414_12589372	3300015051	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASGSDEEYVIFDQRTRKIVANGSSLQPRL*
Ga0137420_12808714	3300015054	Vadose Zone Soil	MLCAAYDILRKNATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVA
Ga0137420_13237933	3300015054	Vadose Zone Soil	AAYDILRKDATHMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVTIGRSL*
Ga0137418_100618643	3300015241	Vadose Zone Soil	MLCAAYDILRKDATHMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVEIGRSLQPGL*
Ga0137412_100097961	3300015242	Vadose Zone Soil	MLCAAYDILRKDATHMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVEIGRSLQPDL*
Ga0137409_100636183	3300015245	Vadose Zone Soil	MLCAAYDILRKDATHMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVEIGRSL
Ga0137403_100271583	3300015264	Vadose Zone Soil	MGPHLKRKTNTEMLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVAIGHSLQPRQ*
Ga0066662_113302452	3300018468	Grasslands Soil	MLCAAYDIFRKDAADVVWVEAVHDFEAAKLRVQELARRSDGEYVIFDHRSGKVVPNGGAGTPYR
Ga0179590_11720132	3300020140	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVEIGHSLQPRQ
Ga0179594_101172582	3300020170	Vadose Zone Soil	MLSAAYDILKKDSAELVWLEAAHDLETAKSRVKEIAARSDGEYVIFDQRTRRIVASFNASKAQL
Ga0179592_102343842	3300020199	Vadose Zone Soil	RKWAPGKKRKTHQMLCAAYDILRKDETDMVWVEAVHDLETAKSRVQELAAGSDEEYVIFDQRTRKIVANGTSL
Ga0179592_102383202	3300020199	Vadose Zone Soil	MLCAAYDILRKDETDMVWVEAVHDLETAKSRVQELAAGSDEEYVIFDQRTRKIVANGTSL
Ga0210407_101724534	3300020579	Soil	MLCAAYDILRKDATDIVWVEAVHDLEAAKSRVKELAAKSNEEYVIYDQRARRIVADSSSS
Ga0210395_110799041	3300020582	Soil	TDKTRMFCAAYDILKKEAATLVWVEASFDLEGARSRVKELVANSRDVYVIFDQRTRQIIANGNSPNTCA
Ga0210401_101714533	3300020583	Soil	MLSAAYDILKKDAAELVWLEAAHDLEAAKSRVKELAARASGEYVIYDQRTRRIVASFIAPSAQA
Ga0179596_104863202	3300021086	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVANGSSLRPRL
Ga0210404_100883712	3300021088	Soil	MFCAAYDILKKEAATLVWVEASFDLEGARSRVKELVANSRDVYVIFDQRTRQIIANGNSPNTCA
Ga0210406_103970433	3300021168	Soil	ILKKEAATLVWVEASFDLEGARSRVKELVANSRDVYVIFDQRTRQIIANGNSPNTCA
Ga0210405_100153847	3300021171	Soil	MLCAAYDILKKEAATLIWVEAAHDLESARVRVKELVASSPDEYVIFDQRTRQIVANSNFPRAHS
Ga0210408_101369602	3300021178	Soil	MLCAAYDILRKDATGMVWVEAVHDLETARSRVQELVAASDEEYLIFDQRSRKIIPDGTAPSARLKNQASI
Ga0210408_113591872	3300021178	Soil	MKNRMLVAAYDILKKDSIALVWVEAVHDLETARSRVKELSAGSKVEYVIFDQRTRKIVPNFNVSIARL
Ga0210389_104863851	3300021404	Soil	SLEITLQLPHLRGMNRMLSAAYDILKKDASELVWLEAAHDLEAAKSRVKELAARASGEYVIYDQRTRRIVASFIAPSAQA
Ga0210409_108313491	3300021559	Soil	MLCAAYDILRKDATGMVWVEAVHDLETARSRVQELVAASDEEYVIFDQRSRKIIPDGTAPSARLKNQASI
Ga0179589_100730702	3300024288	Vadose Zone Soil	MLCAAYDILRKDATHMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVAIGHSLQPRQ
Ga0179589_100823773	3300024288	Vadose Zone Soil	MLSAAYDILRKDATDMVWVEAVHDLETAKSRVQELAAGSDEEYVIFDQRTRKIVANGTSL
Ga0179589_103244671	3300024288	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVANGSSLQPRL
Ga0209131_100025724	3300026320	Grasslands Soil	MDPVGFTGNKERMLSAAYDILKKDAAELVWLEAAYDLETAKSRVKELAARGDGEYVIFDQRTRRIVASFTAPSARI
Ga0209687_11467632	3300026322	Soil	MLCAAYDILRKDATDMVWVEAVHDLETAKSRVQELAARSEEEYVIFDQRTRKIVANGSSFQPLL
Ga0257155_10858832	3300026481	Soil	MLCAAYDILRKDATGMVWVEAVHDLEAAKSRVKELADGSQKEYVIFDQRTRKIVANGSSP
Ga0179593_10143673	3300026555	Vadose Zone Soil	MLCAAYDILRKDATHMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVTIGRSL
Ga0179593_10226292	3300026555	Vadose Zone Soil	MLCAAYDILRKDETDMVWVEAVHDLETAKSRVQELAAGSDEEYVIFDQRTRKIVANGSSL
Ga0179587_105408801	3300026557	Vadose Zone Soil	LGFFETLAITARKWAPGLKRKTNTGMLCAAYDILRKDATGMVWVEAVHDLEAAKSRVKELADGSEKEYVIFDQRTRKIVANGSSPKPRL
Ga0209179_10156682	3300027512	Vadose Zone Soil	MGPDLKRKTNTEMLCAAYDILRKNATDMVWVEAVHDLEAAKLRVKELASGSDEEYVIFDQRTRKIVANGSSLRPRL
Ga0209220_10344013	3300027587	Forest Soil	MVSAAYDILKKDAANLVWIEAVHDLETAKSRAKELAASSQGEYVIFDQRTRKIVANFSTQNARL
Ga0209733_10070583	3300027591	Forest Soil	MLCAAYDILKKEAATLVWVEASFDLESAMLRVKELVANSDDEYVIFDQRTRQIIASGTSPSTCA
Ga0209329_11480681	3300027605	Forest Soil	MLFAAYDILKKDAADMVWVEAVHDLQTAKLRVKELAAGSHGEYVIFDQRTRKIVANCGAARRF
Ga0209625_10428521	3300027635	Forest Soil	MLVAAYDILKKDAAALIWVEAVHDLETARSRVKELTAGSQVEYVIFDQRTRQIVPNFNAAIPRF
Ga0209217_10073183	3300027651	Forest Soil	MLFPAYDILKKDDASLVWVEAVHDLETAKSRVKELIASSQGEYVIFDQRTRKIVPNSSAPSAHL
Ga0208990_10028954	3300027663	Forest Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKLRVRELASRSDEEYVIFDQRTRKIVADGSSLQPRL
Ga0208981_11136161	3300027669	Forest Soil	MLCAAYDILRKDATDMVWVEAVHDLETAKSRVQELAARSEEEYVIFDQRTRKIVEISRSLQPGL
Ga0209588_12325121	3300027671	Vadose Zone Soil	MLCAAYDILRKDATGMVWVEAVHDLEAAKSRVKELADGSEKEYVIFDQRTRKIVANGSSPKPRL
Ga0209283_102346993	3300027875	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLEAAKSRVKELASASDEEYVIFDQRTRRIVAIGSSLNPRL
Ga0209488_100952892	3300027903	Vadose Zone Soil	MLCAAYDILRKDATDMVWVEAVHDLETAKSRVQELAARSEEEYVIFDQRTRKIVANGSSHQPRL
Ga0209488_104443102	3300027903	Vadose Zone Soil	MLCAAYDILRKDATHMVWVEAVHDLEAAKLRVKELASRSDEEYVIFDQRTRKIVEIGRSLQPGL
Ga0209526_105659221	3300028047	Forest Soil	MLCAAYDILKKEAATLIWVEAAYDLESARLRVKELVDRSPDEYVIFDQRTRQIIANSNSPRAHS
Ga0137415_102542082	3300028536	Vadose Zone Soil	MLCAAYDILRKDATGMVWVEAVHDLEAAKSRVKELADGSEKEYVIFDQRTRKIVANGSSLKPRL
Ga0307482_11755611	3300030730	Hardwood Forest Soil	MLSAAYDILKKDAAALIWVEAVCDLETAKLRVRELVASSQAEFVIFDQRTRKIIVNGDGASSRV
Ga0307482_12536802	3300030730	Hardwood Forest Soil	MLCAAYDILRKDPTGMVWVEAVHDLETARLRVQELVAVSNEEYVIFDQRTRKIITNGAASEVRL
Ga0307482_13216052	3300030730	Hardwood Forest Soil	MLCAAYDILRKDSTDMVWVEAVHDLETAISRVQELIAVSNEEYVIFDQRTRKIIASVAPQKSGG
Ga0073994_123287522	3300030991	Soil	MLSAAYDILKKEAAELVWLEAAFDLETAKSRVKEIAAGSDGEYVIFDQRTRRIVASFGAPSARI
Ga0307474_105891111	3300031718	Hardwood Forest Soil	KDAAALIWVEAVCDLETAKLRVRELVASSQAEFVIFDQRTRRIIMNGDGASARV
Ga0307474_116357262	3300031718	Hardwood Forest Soil	MLCAAYDILRKDSTDMVWVEAVHDLETARLRVQELVAGSDEEYVIFDQRTRKIIANDAVPSPRSGL
Ga0307474_116480801	3300031718	Hardwood Forest Soil	ILRKDSTDMVWVEAVHDLETAISRVQELIAVSNEEYVIFDQRTRKIIASVAPQKSGG
Ga0307477_100941773	3300031753	Hardwood Forest Soil	MLCAAYDILKKEAATLIWVEAAHDLESARVRVKELVASSPDEYVIFDQRTRQIIANSNSPQAHG
Ga0307475_100339963	3300031754	Hardwood Forest Soil	MLCAAYDILRKDSNHMVWVEAVHDLETARSRVQELVAASNEEYVIFDQRSRTIVPDSTVPSTRL
Ga0307475_104660193	3300031754	Hardwood Forest Soil	YTMLCAAYDILKKEAATLIWVEAAHDLESARVRVKELVASSPDEYVIFDQRTRQIIANSNSPQAHG
Ga0307478_100328422	3300031823	Hardwood Forest Soil	MLSAAYDILKRDAAALIWVEAVCDLETAKLRVKELVASSQGEFVIFDQRTRKIIVNGEGASSRV
Ga0307479_102799251	3300031962	Hardwood Forest Soil	MLCAAYDILRKDATDMVWVEAVHDLETARSRVQELVAASDEEYVIFDQRSRKIIPDTAPKRPLEEPI
Ga0307479_110662451	3300031962	Hardwood Forest Soil	EWASASTEEKRMLSAAYDILKRDAAALIWVEAVCDLETAKLRVKELVASSQGEFVIFDQRTRKIIVNGDGASSRV
Ga0307470_100473183	3300032174	Hardwood Forest Soil	MGSGSMENQERMLSAAYDILKKDAAELVWLEAAHDLETAKSRVKEIAAKSDGEYVIFDQRTRRIVASFTTSRAQV
Ga0307470_110142782	3300032174	Hardwood Forest Soil	MLSAAYDILKKDAAALIWVEAVCDLETAKLRVKELVASSQAEFVIFDQRTGGIIMNGDGASARV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077160

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences