Metagenome / Metatranscriptome Family F077152

Basic Information
Family ID	F077152
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	48 residues
Representative Sequence	MKSILYSVCIGSLALALTAGGAQAAKDKRSERAKPQQRSAKVQ
Number of Associated Samples	109
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.46 %
% of genes near scaffold ends (potentially truncated)	96.58 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (86.325 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (11.111 % of family members)
Environment Ontology (ENVO)	Unclassified (31.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.026 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.07% β-sheet: 0.00% Coil/Unstructured: 54.93%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01471	PG_binding_1	22.22
PF10543	ORF6N	6.84
PF08031	BBE	2.56
PF09957	VapB_antitoxin	1.71
PF15937	PrlF_antitoxin	1.71
PF02661	Fic	1.71
PF01565	FAD_binding_4	1.71
PF01850	PIN	1.71
PF12867	DinB_2	0.85
PF08734	GYD	0.85
PF07883	Cupin_2	0.85
PF01192	RNA_pol_Rpb6	0.85
PF13371	TPR_9	0.85
PF02452	PemK_toxin	0.85
PF00701	DHDPS	0.85
PF00248	Aldo_ket_red	0.85
PF09900	DUF2127	0.85
PF15919	HicB_lk_antitox	0.85
PF14237	GYF_2	0.85
PF03681	Obsolete Pfam Family	0.85
PF05016	ParE_toxin	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.56
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.71
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	0.85
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.85
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.32 %
Unclassified	root	N/A	13.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.32 %
Unclassified	root	N/A	13.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.32 %
Unclassified	root	N/A	13.68 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	57.26 %
Unclassified	root	N/A	13.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	57.26 %
Unclassified	root	N/A	13.68 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.71 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	36.75 %
Unclassified	root	N/A	13.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.71 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.71 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	35.90 %
Unclassified	root	N/A	13.68 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	1.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %
Verrucomicrobia bacterium 13_1_20CM_3_54_17	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_3_54_17	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	35.90 %
Unclassified	root	N/A	13.68 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.85 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.85 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.85 %
Verrucomicrobia bacterium 13_1_20CM_3_54_17	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_3_54_17	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	35.90 %
Unclassified	root	N/A	13.68 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.85 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.85 %
Curtobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium	0.85 %
Verrucomicrobia bacterium 13_1_20CM_3_54_17	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_3_54_17	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	35.90 %
Unclassified	root	N/A	13.68 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %
unclassified Curtobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium	0.85 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.85 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.85 %
Verrucomicrobia bacterium 13_1_20CM_3_54_17	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_3_54_17	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	35.90 %
Unclassified	root	N/A	13.68 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %
Curtobacterium sp. ER1/6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6	0.85 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.85 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.85 %
Verrucomicrobia bacterium 13_1_20CM_3_54_17	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_3_54_17	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02IFH0H	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig933372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
2189573004\|GZGWRS401EQCYZ	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1074303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300000955\|JGI1027J12803_109531979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300002899\|JGIcombinedJ43975_10005280	Not Available	2093	Open in IMG/M
3300004114\|Ga0062593_101656704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	697	Open in IMG/M
3300004479\|Ga0062595_101968292	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300004643\|Ga0062591_101260996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300004643\|Ga0062591_102687282	Not Available	526	Open in IMG/M
3300005171\|Ga0066677_10655710	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005187\|Ga0066675_10400941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1013	Open in IMG/M
3300005290\|Ga0065712_10266933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_3_54_17	924	Open in IMG/M
3300005295\|Ga0065707_10538828	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	729	Open in IMG/M
3300005329\|Ga0070683_100278352	All Organisms → cellular organisms → Bacteria → Proteobacteria	1592	Open in IMG/M
3300005338\|Ga0068868_102239427	Not Available	521	Open in IMG/M
3300005354\|Ga0070675_100340790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1328	Open in IMG/M
3300005367\|Ga0070667_100468916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1152	Open in IMG/M
3300005554\|Ga0066661_10063256	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300005586\|Ga0066691_10085771	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1750	Open in IMG/M
3300005586\|Ga0066691_10339965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	888	Open in IMG/M
3300005719\|Ga0068861_100495107	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300005841\|Ga0068863_100432154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1291	Open in IMG/M
3300006755\|Ga0079222_11015956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300006806\|Ga0079220_11937561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
3300006854\|Ga0075425_102752755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300006880\|Ga0075429_101844229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300006904\|Ga0075424_101951410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300007788\|Ga0099795_10373356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	642	Open in IMG/M
3300009038\|Ga0099829_10470640	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300009137\|Ga0066709_104481788	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300009177\|Ga0105248_11092968	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	901	Open in IMG/M
3300009553\|Ga0105249_13210773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300010040\|Ga0126308_10192483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1308	Open in IMG/M
3300010325\|Ga0134064_10246154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	660	Open in IMG/M
3300010326\|Ga0134065_10433931	Not Available	534	Open in IMG/M
3300010333\|Ga0134080_10163228	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300010335\|Ga0134063_10277502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	802	Open in IMG/M
3300010359\|Ga0126376_12865218	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300010362\|Ga0126377_10637925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1113	Open in IMG/M
3300010371\|Ga0134125_12077225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	618	Open in IMG/M
3300010398\|Ga0126383_10158335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2122	Open in IMG/M
3300011000\|Ga0138513_100029589	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300012203\|Ga0137399_10337027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1251	Open in IMG/M
3300012210\|Ga0137378_11183248	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300012353\|Ga0137367_10506844	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300012362\|Ga0137361_10455737	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1174	Open in IMG/M
3300012925\|Ga0137419_11643528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300012948\|Ga0126375_11520282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300012958\|Ga0164299_10410261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	873	Open in IMG/M
3300012971\|Ga0126369_12547015	Not Available	597	Open in IMG/M
3300012988\|Ga0164306_10605550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	859	Open in IMG/M
3300012988\|Ga0164306_12033808	Not Available	500	Open in IMG/M
3300014325\|Ga0163163_12911469	Not Available	534	Open in IMG/M
3300015054\|Ga0137420_1066163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300015357\|Ga0134072_10042325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1237	Open in IMG/M
3300015371\|Ga0132258_11655375	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300015372\|Ga0132256_101402535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	810	Open in IMG/M
3300015373\|Ga0132257_104627588	Not Available	501	Open in IMG/M
3300016404\|Ga0182037_10181474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1616	Open in IMG/M
3300016445\|Ga0182038_10064290	All Organisms → cellular organisms → Bacteria → Proteobacteria	2516	Open in IMG/M
3300017656\|Ga0134112_10353982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300018056\|Ga0184623_10215533	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300018071\|Ga0184618_10410192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300018074\|Ga0184640_10532740	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300018482\|Ga0066669_12057751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300019865\|Ga0193748_1009175	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300019874\|Ga0193744_1036340	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300019878\|Ga0193715_1037345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1050	Open in IMG/M
3300019879\|Ga0193723_1078092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	951	Open in IMG/M
3300019881\|Ga0193707_1128882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	729	Open in IMG/M
3300019996\|Ga0193693_1003311	All Organisms → cellular organisms → Bacteria	3656	Open in IMG/M
3300020004\|Ga0193755_1075774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1083	Open in IMG/M
3300020062\|Ga0193724_1114391	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300021560\|Ga0126371_10497272	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300022534\|Ga0224452_1081520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	981	Open in IMG/M
3300022756\|Ga0222622_11313254	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300025921\|Ga0207652_10758980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	863	Open in IMG/M
3300025927\|Ga0207687_10957711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300025930\|Ga0207701_10280281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1450	Open in IMG/M
3300025930\|Ga0207701_11598745	Not Available	525	Open in IMG/M
3300025933\|Ga0207706_11357777	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300025939\|Ga0207665_11464649	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300025972\|Ga0207668_11803498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300025981\|Ga0207640_10877122	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	782	Open in IMG/M
3300026023\|Ga0207677_12304031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300026088\|Ga0207641_10636698	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1046	Open in IMG/M
3300026116\|Ga0207674_10594195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1069	Open in IMG/M
3300026306\|Ga0209468_1178867	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300026330\|Ga0209473_1213417	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	718	Open in IMG/M
3300026530\|Ga0209807_1326828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300026540\|Ga0209376_1218947	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300026542\|Ga0209805_1204520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	846	Open in IMG/M
3300026547\|Ga0209156_10415417	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300027050\|Ga0209325_1044530	Not Available	537	Open in IMG/M
3300028379\|Ga0268266_11786068	Not Available	590	Open in IMG/M
3300028380\|Ga0268265_12143777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300028793\|Ga0307299_10374783	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300030945\|Ga0075373_10053635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1957	Open in IMG/M
3300031057\|Ga0170834_102832823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300031122\|Ga0170822_14046079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	640	Open in IMG/M
3300031231\|Ga0170824_114588386	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300031446\|Ga0170820_12688492	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	893	Open in IMG/M
3300031446\|Ga0170820_17450636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6	586	Open in IMG/M
3300031446\|Ga0170820_17451711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	936	Open in IMG/M
3300031474\|Ga0170818_100290499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	881	Open in IMG/M
3300031474\|Ga0170818_111619076	Not Available	715	Open in IMG/M
3300031716\|Ga0310813_11922116	Not Available	557	Open in IMG/M
3300031854\|Ga0310904_11321536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300031939\|Ga0308174_10843376	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	772	Open in IMG/M
3300031946\|Ga0310910_10235996	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300032180\|Ga0307471_101812829	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300032205\|Ga0307472_100082932	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300034354\|Ga0364943_0082599	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.49%
Host-Associated	Host-Associated	20.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.21%
Plants	Host-Associated → Plants	20.51%
Aquatic	Environmental → Aquatic	4.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.40%
Sediment	Environmental → Aquatic → Sediment	4.27%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.27%
Loam	Environmental → Terrestrial → Soil → Loam	4.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077152

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_04368580	2065487018	Soil	MGKGKTMEGKNMKSILYSVCIGILALALTAGGAQAAKDKRPERAKPQQRSAKVQAARPANTGRT
KansclcFeb2_04808810	2124908045	Soil	MKRILYSVCIGSLALALTASAAQDNKRKSERTRPQHRTATVQTARP
FG2_07450440	2189573004	Grass Soil	MKSILYSVCIGSLALALTAGGAQAATQKRTERAKPQQ
AF_2010_repII_A100DRAFT_10743031	3300000655	Forest Soil	MKSILYSALVGTLALALASGGAQAAKDNNKRSQRAQPQQRT
JGI1027J12803_1095319792	3300000955	Soil	MKSILYSVCIGGVALAFTAVGAQAATDKRPERAKPQ
JGIcombinedJ43975_100052801	3300002899	Soil	MKRILYSVCIGICALALTAGGAEAAKDKDKRSERAKAQQRTAKVHA
Ga0062593_1016567041	3300004114	Soil	MEGNMKRILYSVCIGSLALALTTGGAQAARDKRPERSRPQQRTAAVHAARPANTGRTMN
Ga0062595_1019682921	3300004479	Soil	MENEGKNMKSILYSVCIGSLALALTAGAAQDKRAERARPQQRAANVHAARPANTGRTM
Ga0062591_1012609962	3300004643	Soil	MEGNTMRKIIYSVCIGSLALALTAWGAQNNNRKPERARPQHRTANVHAARPANTHATMAARH*
Ga0062591_1026872821	3300004643	Soil	MKAILYSVCIGSLALVVTVGRAQAATEKEKRAPSAKPQQRSA
Ga0066677_106557101	3300005171	Soil	MKSILYSVCIGTLGLALTAGGAQADKDKRSERAKPQQRSAKVQAARPA
Ga0066675_104009412	3300005187	Soil	MKSILYSVCIGSLALALTAGGAQADKDKRSERAKPQQRSAKVQAARPANT
Ga0065712_102669331	3300005290	Miscanthus Rhizosphere	MKSILYSALVGSLALALATGGAQAAKDNNKRSQRAQPQQRSANVHAARPANTGR
Ga0065707_105388283	3300005295	Switchgrass Rhizosphere	MKRVLYSVCIGSLALALTAGGAQAATEKRPERAKPQQRAAK
Ga0070683_1002783523	3300005329	Corn Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQQRSANVQAAKPAN
Ga0068868_1022394271	3300005338	Miscanthus Rhizosphere	MKSILYSACIGTLALALTPGGAQAATDKNKRQERAKPQQRTAHVQAA
Ga0070675_1003407903	3300005354	Miscanthus Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQVAKPANTGRSMA
Ga0070667_1004689161	3300005367	Switchgrass Rhizosphere	MEGNMKRILYSACVGSLALALTAGGAQAARDKQPERSRPQQRTATVHAARPANTGRAMT
Ga0066661_100632561	3300005554	Soil	MKSILYSVCIGSLALALTAGGAQADKDKRSERAKPQQRSAKVQAARPANTGGTMSARRN
Ga0066691_100857712	3300005586	Soil	MKSILYSVCIGSLALALTAGGAQAPKDKRSERAKPQQRSAKVQA
Ga0066691_103399652	3300005586	Soil	MKSILYSVCIGSLALALTAGGAQADKDKRSERAKPQQRSAKVQAARPANTG
Ga0068861_1004951073	3300005719	Switchgrass Rhizosphere	MKSILYSVCIGTLALALTTGGAQAAKEKRTERAKPQQRSVKVQAARPANTG
Ga0068863_1004321541	3300005841	Switchgrass Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQVAKPANTGRSMAAHR
Ga0079222_110159562	3300006755	Agricultural Soil	MRRIINSVCIGTLALALTAGAAQDRDKRSERAKPQQRTAKVHAARP
Ga0079220_119375611	3300006806	Agricultural Soil	MKSILYLVCIGSLALALTAGAAQDKRAERARPQQRAANVHAA
Ga0075425_1027527551	3300006854	Populus Rhizosphere	MEMRENMKRILYSVCIGSLALALTAAAAQDNKRKSERTRPQHRTATVQTARPANTGRS
Ga0075429_1018442291	3300006880	Populus Rhizosphere	MKSILYSVVIGSLALALTTGAVQGATDKNKRQEKAKPQH
Ga0075424_1019514101	3300006904	Populus Rhizosphere	MKAILYSVCIGSLALAVAAGGAQAATDKDKRQQRAKPQPRSANVQARP
Ga0099795_103733563	3300007788	Vadose Zone Soil	MKRVLYSVCIGSLALALTAGAANDNKRKPETASPQHRTA
Ga0099829_104706403	3300009038	Vadose Zone Soil	MKRVLYSVCIGSLALALTAGAAQDKRSEKARPQHRTANVHAARPANTGGMM
Ga0066709_1044817881	3300009137	Grasslands Soil	MEMRENMKSILYSACIGTLALVLTTGGAQAAKDKRSERATPQHRSAAVHT
Ga0105248_110929682	3300009177	Switchgrass Rhizosphere	MEKGKTMEGKIMKRILYSVCIGTIALALTAGGAQAATDNNKRQARTKPQQRSA
Ga0105249_132107731	3300009553	Switchgrass Rhizosphere	MKSILYSVCIGTLALALTTGGAQAATDKRTGKAKPQQRP
Ga0126308_101924831	3300010040	Serpentine Soil	MKSILYSICIGSVALTLTAVGAQAATDKRSEKAKPQQRTAKVQAARPANTGR
Ga0134064_102461541	3300010325	Grasslands Soil	MKSILYSVCIGSLALALTAGGAQAAKDKRSERAKP
Ga0134065_104339311	3300010326	Grasslands Soil	MKRVVYSLCIGSLALALTSGGAQAATERPERAKQQHRSA
Ga0134080_101632281	3300010333	Grasslands Soil	MKSILYSVCIGSLALALTAGGAQAPKDKRSERAKPQQRSAKVQAARPANT
Ga0134063_102775021	3300010335	Grasslands Soil	MKSILYSLCIGSLALALTAGGAQAARDKRSDNAKPQQR
Ga0126376_128652182	3300010359	Tropical Forest Soil	MEKRGKNMKSILYSVCIGSLALALTAGAQQYNDKKPQRAKPQQR
Ga0126377_106379251	3300010362	Tropical Forest Soil	MKSILYSVCIGSLALALTAGGAQAATDKNKRQERAKPLHRTANVQAARPANTGRSMAA
Ga0134125_120772252	3300010371	Terrestrial Soil	MEKGNSGGKNMKSILYSTCIGTLALALTAGGAQAATDKNKRQERAKPQHRTANVQATRPA
Ga0126383_101583351	3300010398	Tropical Forest Soil	MKSILYSVCVGTVAVALTAGGAQAATDKDKRAERAKP
Ga0138513_1000295892	3300011000	Soil	MKRVLYSVCIGILALALTAGAAQDTKRKSERARPQHRTANVHAARPAKP
Ga0137399_103370272	3300012203	Vadose Zone Soil	MYSVCIGSLALALTAGGAQADKDKRSERAKPQQRSAKVQAARPANTG
Ga0137378_111832482	3300012210	Vadose Zone Soil	MKRVLYSVCIGSLALALTAGAAQDNKKKPERARLQHRTA
Ga0137367_105068441	3300012353	Vadose Zone Soil	MKRVLYSVCIGSLALALTAGAAQDKRSERARPQHRTANVHAARPANTGGTISTHRNVS
Ga0137361_104557373	3300012362	Vadose Zone Soil	MKSILYSVCIGSLALALTAGGAQADKDKRSERAKPQQRSAKVQAA
Ga0137419_116435281	3300012925	Vadose Zone Soil	MKSILYSVCIGSLALALTAGGAQADKDKRSERAKPQQRSAKVQAARPVNTGGTMSA
Ga0126375_115202821	3300012948	Tropical Forest Soil	MKRILYSVCIGSLALALTAAAAQDNKRKSERTRPQHRTATVQTARPVNT
Ga0164299_104102611	3300012958	Soil	MKSILHSVCIGSLALALTAGAAQAATENRPERAKPQQR
Ga0126369_125470151	3300012971	Tropical Forest Soil	MKGKTMRRIIYSVCIGSLALALTAGAQQVNDRKPERAKQQA
Ga0164306_106055502	3300012988	Soil	MKSILYSICIGSLALALTAEGAQAAKDKRPERAKPQQRTANVQAARPANTGRT
Ga0164306_120338081	3300012988	Soil	MENMEGNMKRILYSACVGSLALALTAGGAQAARDKRPERSRPQQRTA
Ga0163163_129114691	3300014325	Switchgrass Rhizosphere	MKSILYSICIGTVALALTVVGAQGATDKNKRQERAKPQPRSAHPAAAARPANTTRTMS
Ga0137420_10661631	3300015054	Vadose Zone Soil	MQFGLTCKMENEGKIMKSILYSVCIGSVALALTAVGAQAATERRTERAKPQQRTAKVQAARPTN
Ga0134072_100423251	3300015357	Grasslands Soil	MKRVLYSVCIGSLALALTAGAAQDNKKKPERARPQHRTANVLVARPANTGATMSAHRNVS
Ga0132258_116553753	3300015371	Arabidopsis Rhizosphere	MRKGKNMKSILYSALVGTLALALATGGAQAATDKNKRQERVKPQQ
Ga0132256_1014025352	3300015372	Arabidopsis Rhizosphere	MKRILYSVCIGSLALALTAGAAQDNKKKPERARPQHGT
Ga0132257_1046275881	3300015373	Arabidopsis Rhizosphere	MKRVLYSACIGSLALALTAGAQQINDRRAERARPQQRRATVQTARFGNTGSVRS
Ga0182032_120402011	3300016357	Soil	MKSILYSVLVGTLALALATGRAQAATDNNKRSQRAQPQQRSANVHAARPVTAARPAVNPA
Ga0182037_101814744	3300016404	Soil	MKSILYSVCIGILALALTGAGAQAATDKNKRQERAKPQQRS
Ga0182039_101026165	3300016422	Soil	MKSILYSVCIGILALALAGAGAQAATDKDKRPERAKPQQRSAKVQPARPATAARPASAMPAT
Ga0182038_100642901	3300016445	Soil	MKSILYSVCIGILALSLTGAGAQAATDKNKRQERAKPQQRSAKVQPARP
Ga0134112_103539821	3300017656	Grasslands Soil	MKSILYSVCIGSLALALTAGGAQAAKDKRSERAKPQQRSAKVQ
Ga0184623_102155332	3300018056	Groundwater Sediment	MKSILYSVCIGILALALTAGAAQAAKDKRPERAKPQQRSAKVQAA
Ga0184618_104101922	3300018071	Groundwater Sediment	MEKRENHGGKIMKRILYSVCIGSLALALTAGAAQDNKRKPERAKPQHRTANVHAA
Ga0184640_105327402	3300018074	Groundwater Sediment	MKRVLYSVCIGSLALALTAGAAQDNKRKSERARPQHRTANVHAARPANTGRAMSAH
Ga0066669_120577512	3300018482	Grasslands Soil	MEKEGKTMRRIIYSVCIGSLALALTAGAQQVNVRKPERAKPQARTANVHAARPTNSG
Ga0193748_10091751	3300019865	Soil	MEKGKTMEGKIMKRVLYSVCIGSLALALTAGAANDNKRKPERASPQHRTANVQAARPAN
Ga0193744_10363402	3300019874	Soil	MKSILYSVCIASLALALTAGAANDNKRKPERASPQHRTANVHAARPANTGRTMSAH
Ga0193715_10373452	3300019878	Soil	MKRVLYSVCVGSLALALTAGAAQDNKKKPERARPQHRTANVHAAR
Ga0193723_10780922	3300019879	Soil	MKSILYSICIGSLALALTAGAAQAATEKRPERAKPPQRTAKVQTARPAN
Ga0193707_11288821	3300019881	Soil	MEKRENHGGKIMKRILYSVCIGSLALALTAGAAQDNKRKSER
Ga0193693_10033115	3300019996	Soil	MKSILHSVCIGSLALALTAGAAQSATEKRPERAKPQQRTAKVQTARPA
Ga0193755_10757742	3300020004	Soil	MKRVLYSVCIGSLALALTAGAAQDNKRKPERAKPQHRT
Ga0193724_11143911	3300020062	Soil	MKRILYSVCIGSLALALTAGAAQDNKKKPERARPQH
Ga0126371_104972721	3300021560	Tropical Forest Soil	MKAILYSVCVGTLAVALTAGGAQAATDKNKRRERAKPQH
Ga0224452_10815201	3300022534	Groundwater Sediment	MKSILYSVCIGSLALALTAGAAQDNKKKPERARPQHR
Ga0222622_113132541	3300022756	Groundwater Sediment	MKRVLYSVCIGSLALALTAGAAQDNKKKPERARPQ
Ga0207652_107589801	3300025921	Corn Rhizosphere	MKSILYSACIGTLALALTAGGAQAAKDKRTERAKPQQRSTK
Ga0207687_109577111	3300025927	Miscanthus Rhizosphere	MENWEGKNMKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQVAKP
Ga0207701_102802811	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKSILYSVCIGSLALAVAAGGTQAATDNDQRSKKAKPQQRSAKVQP
Ga0207701_115987451	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MENMEGNMKRILYSACVGSLALALTAGGAQAARDKRPERSRPQQRTATVHAARPANTG
Ga0207706_113577771	3300025933	Corn Rhizosphere	MKSILYSVCIGTLALALTAGGAQAATDKRSEKAKPQQRSAKVQAAR
Ga0207665_114646492	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKSILYSVCIGSLALALTAGGAQAAKDKRSERAKPQQRTANVHAARPANTGR
Ga0207668_118034981	3300025972	Switchgrass Rhizosphere	MKSILYSVCIGTLALALTTGGAQAATDKRTGKAKPQQRPAKVQA
Ga0207640_108771222	3300025981	Corn Rhizosphere	MKTILYTICIGSLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARP
Ga0207677_123040312	3300026023	Miscanthus Rhizosphere	MKSILYSVCIGSLALALTAGGAQAAKDKRLERAKPQQR
Ga0207641_106366982	3300026088	Switchgrass Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQH
Ga0207674_105941951	3300026116	Corn Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQQRSANVQAAKPANTGRSMAAH
Ga0209468_11788671	3300026306	Soil	MKSILYSVCIGSLALALTAGGAQAARDKRSDNAKPQQRSAKVQAARPANTGRSMS
Ga0209473_12134171	3300026330	Soil	MKSILYSVCIGTLGLALTAGGAQADKDKRSERAKPQQRSAKIQAA
Ga0209807_13268282	3300026530	Soil	MEKEGKTMRRIIYSVCIGSLALALTAGAQQVNDRKPERAKPQA
Ga0209376_12189471	3300026540	Soil	MEKEGKTMRRIIYSVCIGSLALALTAGAQQVNDRKPERAKPQARTA
Ga0209805_12045202	3300026542	Soil	MKSILYSVCIGTLALALTAGGAQADKDKRSERAKPQQRSAKVQAARPANTGATMSARRNA
Ga0209156_104154171	3300026547	Soil	MKPILYSVCIGSLALALTAGAAQAATDKRPERAKPQHRSANVQTAGPANAGRTVSAHRDV
Ga0209325_10445301	3300027050	Forest Soil	MKAIGYSIVIGSLALALTAGAQQTRDRRPEKAKAQQRSANGHAARPANTHANMGARH
Ga0268266_117860682	3300028379	Switchgrass Rhizosphere	MENMEGNMKRILYSVCVGTLALTLTAGGAQAARDKRPER
Ga0268265_121437771	3300028380	Switchgrass Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQVAKPANTGGSMAAHR
Ga0307299_103747831	3300028793	Soil	MKRVLYSVCIGSLALALTAGAAQDNKKKAERARPQHR
Ga0075373_100536351	3300030945	Soil	MKSILYSICIGSLALALTAGAAQAATEKRPERAKPQQRTANVQAARPANTGRTMSVHR
Ga0170834_1028328231	3300031057	Forest Soil	MKTILNTVCIGSLALALTAGGAQAAKDKGPERAKPQQRTAKVQPARPASAGRTMAE
Ga0170822_140460792	3300031122	Forest Soil	MKTILYTVCIGSLALALTAGGAQAAKDKGPERAKPQQRTAKVQP
Ga0170824_1056829682	3300031231	Forest Soil	MKSILYLVCVGTLALALAAGGAQTATDKNKHQERAKPQQRSAKVQTARPATAARPASAMPAT
Ga0170824_1145883863	3300031231	Forest Soil	MKRVLYSVCIGSLALALTAGAANDNERKPERASPQHRTANVHAATPANTGR
Ga0170820_126884922	3300031446	Forest Soil	MKTILYTVCIGSLALALTAGGAQAAKDKGPERAKPQQRTAK
Ga0170820_174506362	3300031446	Forest Soil	MKSILYSVCIGSLAVVLAAGGAQAATNKRPERAKPQARTAKVQAARPANTGRT
Ga0170820_174517113	3300031446	Forest Soil	MKRVLYSVCIGSLALALTAGAANDNKRKPERTSPQHRTANVHAARPANTGRT
Ga0170818_1002904993	3300031474	Forest Soil	MKRVLYSVCIGSLALALTAGAANDNKRKPERAKPQQRTAKVQAARPAN
Ga0170818_1116190762	3300031474	Forest Soil	MKSILYLVCVGTLALALAAGGAQAATEKEKRAQSAKPQQRSA
Ga0310813_119221161	3300031716	Soil	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPHQRSANVHAARPANAG
Ga0310904_113215362	3300031854	Soil	MKSILYSVCIGSLALALTTGGAQAAKDKRTERAKPQQ
Ga0308174_108433761	3300031939	Soil	MKTILYTICIGSLALALTAGGAQAAKNKQLERAKPQQRTAKVQPARP
Ga0310910_102359964	3300031946	Soil	MKSILYSVCIGILALSLTGAGAQAATDKNKRQERAKPQQ
Ga0307471_1018128291	3300032180	Hardwood Forest Soil	MKRVLYSVCIGSLALALTAGAAQDKKSERARPQHRTANVHAARPANTGATTRAR
Ga0307472_1000829321	3300032205	Hardwood Forest Soil	MKSILYSVCIGILALALTAGGTQAAKDKRPERAKPQQGSAKVQAAR
Ga0364943_0082599_1_135	3300034354	Sediment	MKSILYSVCIGILALALTAGAAQDNKRKPERAKPQHRTANVHAAR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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