Metagenome / Metatranscriptome Family F077116

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077116
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	59 residues
Representative Sequence	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQTAA
Number of Associated Samples	100
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.76 %
% of genes near scaffold ends (potentially truncated)	18.80 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.598 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (31.624 % of family members)
Environment Ontology (ENVO)	Unclassified (48.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.47% β-sheet: 0.00% Coil/Unstructured: 42.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF04343	DUF488	44.44
PF02781	G6PD_C	27.35
PF00581	Rhodanese	1.71
PF01497	Peripla_BP_2	0.85
PF15919	HicB_lk_antitox	0.85
PF13519	VWA_2	0.85
PF12867	DinB_2	0.85
PF01476	LysM	0.85
PF01471	PG_binding_1	0.85
PF00342	PGI	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	44.44
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	27.35
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.85
COG0614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.85
COG4558	ABC-type hemin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.85
COG4592	ABC-type Fe2+-enterobactin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.85
COG4594	ABC-type Fe3+-citrate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.85
COG4607	ABC-type enterochelin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.60 %
Unclassified	root	N/A	9.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.60 %
Unclassified	root	N/A	9.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.60 %
Unclassified	root	N/A	9.40 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.33 %
Unclassified	root	N/A	9.40 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	16.24 %
Unclassified	root	N/A	9.40 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %

Name	Rank	Taxonomy	Distribution
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	16.24 %
Unclassified	root	N/A	9.40 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	16.24 %
Unclassified	root	N/A	9.40 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	16.24 %
Unclassified	root	N/A	9.40 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	16.24 %
Unclassified	root	N/A	9.40 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	16.24 %
Unclassified	root	N/A	9.40 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459019\|G14TP7Y01EU7D4	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300002558\|JGI25385J37094_10049171	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300002560\|JGI25383J37093_10119397	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300003321\|soilH1_10156477	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300005167\|Ga0066672_10053530	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300005167\|Ga0066672_10054678	All Organisms → cellular organisms → Bacteria	2303	Open in IMG/M
3300005167\|Ga0066672_10109469	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300005171\|Ga0066677_10200161	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300005171\|Ga0066677_10232802	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300005171\|Ga0066677_10529990	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005175\|Ga0066673_10219612	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300005176\|Ga0066679_10378470	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005179\|Ga0066684_10039361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2642	Open in IMG/M
3300005180\|Ga0066685_10853487	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300005181\|Ga0066678_10647924	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005184\|Ga0066671_10311526	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005332\|Ga0066388_100016632	All Organisms → cellular organisms → Bacteria	6173	Open in IMG/M
3300005356\|Ga0070674_100323837	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300005406\|Ga0070703_10000166	All Organisms → cellular organisms → Bacteria	32754	Open in IMG/M
3300005434\|Ga0070709_10288450	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300005436\|Ga0070713_101459131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	664	Open in IMG/M
3300005445\|Ga0070708_101305333	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005451\|Ga0066681_10689751	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005467\|Ga0070706_100336257	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300005471\|Ga0070698_100228290	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300005518\|Ga0070699_100388311	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300005529\|Ga0070741_10000003	All Organisms → cellular organisms → Bacteria	888389	Open in IMG/M
3300005540\|Ga0066697_10691922	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300005549\|Ga0070704_100014956	All Organisms → cellular organisms → Bacteria	4859	Open in IMG/M
3300005549\|Ga0070704_100876070	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005560\|Ga0066670_10367428	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300005560\|Ga0066670_10411667	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300005568\|Ga0066703_10313211	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	948	Open in IMG/M
3300005575\|Ga0066702_10963213	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005598\|Ga0066706_10679188	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300005713\|Ga0066905_100206286	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300006032\|Ga0066696_10209493	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300006034\|Ga0066656_11126122	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300006794\|Ga0066658_10077644	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300006794\|Ga0066658_10360201	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300006796\|Ga0066665_10217697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1493	Open in IMG/M
3300006797\|Ga0066659_10522326	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300006797\|Ga0066659_10932780	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300006797\|Ga0066659_11051619	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300006804\|Ga0079221_11484207	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300006854\|Ga0075425_100000008	All Organisms → cellular organisms → Bacteria	217531	Open in IMG/M
3300009012\|Ga0066710_103573776	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300009038\|Ga0099829_11075630	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300009088\|Ga0099830_11656821	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300009089\|Ga0099828_11307623	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300009137\|Ga0066709_100957133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1251	Open in IMG/M
3300010043\|Ga0126380_11416726	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300010047\|Ga0126382_10010243	All Organisms → cellular organisms → Bacteria	4466	Open in IMG/M
3300010303\|Ga0134082_10315452	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300010323\|Ga0134086_10300876	Not Available	623	Open in IMG/M
3300010329\|Ga0134111_10088583	Not Available	1175	Open in IMG/M
3300010335\|Ga0134063_10189029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	966	Open in IMG/M
3300010359\|Ga0126376_10183305	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1716	Open in IMG/M
3300010362\|Ga0126377_12698449	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300010362\|Ga0126377_12752262	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300010397\|Ga0134124_10185356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1879	Open in IMG/M
3300010400\|Ga0134122_12514084	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300010401\|Ga0134121_10102320	All Organisms → cellular organisms → Bacteria → Acidobacteria	2404	Open in IMG/M
3300010401\|Ga0134121_10164846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1898	Open in IMG/M
3300012200\|Ga0137382_10982660	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300012206\|Ga0137380_10035360	All Organisms → cellular organisms → Bacteria	4608	Open in IMG/M
3300012207\|Ga0137381_10301390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1395	Open in IMG/M
3300012208\|Ga0137376_10472150	Not Available	1089	Open in IMG/M
3300012209\|Ga0137379_10837573	Not Available	824	Open in IMG/M
3300012211\|Ga0137377_11022114	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300012212\|Ga0150985_108279280	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300012349\|Ga0137387_11270460	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012350\|Ga0137372_10511511	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300012353\|Ga0137367_10059217	All Organisms → cellular organisms → Bacteria	2863	Open in IMG/M
3300012355\|Ga0137369_10175346	Not Available	1680	Open in IMG/M
3300012355\|Ga0137369_10814238	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012357\|Ga0137384_10525998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	970	Open in IMG/M
3300012362\|Ga0137361_10023852	All Organisms → cellular organisms → Bacteria	4716	Open in IMG/M
3300012405\|Ga0134041_1263409	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300012917\|Ga0137395_10338748	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300012918\|Ga0137396_10218202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1404	Open in IMG/M
3300012923\|Ga0137359_10084210	All Organisms → cellular organisms → Bacteria → Acidobacteria	2794	Open in IMG/M
3300012948\|Ga0126375_10196228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1321	Open in IMG/M
3300012975\|Ga0134110_10263065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	737	Open in IMG/M
3300017656\|Ga0134112_10426969	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300018431\|Ga0066655_10025862	All Organisms → cellular organisms → Bacteria	2801	Open in IMG/M
3300018431\|Ga0066655_10356538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	961	Open in IMG/M
3300018433\|Ga0066667_11984348	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300018468\|Ga0066662_10123787	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300018482\|Ga0066669_11176170	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300018482\|Ga0066669_12135739	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300019885\|Ga0193747_1000899	All Organisms → cellular organisms → Bacteria	8614	Open in IMG/M
3300024187\|Ga0247672_1044814	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300025885\|Ga0207653_10000533	All Organisms → cellular organisms → Bacteria	14257	Open in IMG/M
3300025910\|Ga0207684_10267224	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1476	Open in IMG/M
3300025922\|Ga0207646_11299987	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300025937\|Ga0207669_10497470	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	975	Open in IMG/M
3300026297\|Ga0209237_1220208	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300026300\|Ga0209027_1133850	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300026309\|Ga0209055_1207666	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300026312\|Ga0209153_1215094	Not Available	652	Open in IMG/M
3300026317\|Ga0209154_1094496	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300026318\|Ga0209471_1250822	Not Available	608	Open in IMG/M
3300026325\|Ga0209152_10161384	Not Available	846	Open in IMG/M
3300026330\|Ga0209473_1232556	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300026527\|Ga0209059_1242975	Not Available	604	Open in IMG/M
3300026537\|Ga0209157_1213691	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300026538\|Ga0209056_10381539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	891	Open in IMG/M
3300026550\|Ga0209474_10176676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1376	Open in IMG/M
3300026551\|Ga0209648_10177442	Not Available	1652	Open in IMG/M
3300026552\|Ga0209577_10173020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1680	Open in IMG/M
3300026552\|Ga0209577_10418549	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300026552\|Ga0209577_10548972	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300031720\|Ga0307469_10614497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	974	Open in IMG/M
3300031720\|Ga0307469_11347863	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300032205\|Ga0307472_100418421	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.73%
Host-Associated	Host-Associated	3.42%
Engineered	Engineered	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.73%
Plants	Host-Associated → Plants	3.42%
Solid Waste	Engineered → Solid Waste	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%
Grass	Engineered → Solid Waste → Grass	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.34%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%
Composting	Engineered → Solid Waste → Grass → Composting	0.85%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	42.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	31.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4MG_04646080	2170459019	Switchgrass, Maize And Mischanthus Litter	MNLEITDEEREFLSELFEEKQKHLIQEINHTDTIDFERMLRTKLSLLEGLMGKLGDTVA
JGI25385J37094_100491712	3300002558	Grasslands Soil	MNLEITEEERELLNEILEEKQKRMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQTVS*
JGI25383J37093_101193971	3300002560	Grasslands Soil	MNLEITEEERELLNEIFEEKQKRMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQTVS*
soilH1_101564772	3300003321	Sugarcane Root And Bulk Soil	MNIEITDQERDFLRELFEEKQKHMIQEINHTDTIDFERMLKQKLELLEGMMRKLGVA*
Ga0066672_100535303	3300005167	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGRMAA*
Ga0066672_100546783	3300005167	Soil	MNLEITDDERDFLSELFEEKQKHMIQEINHTDTIDFERMLKTKLEVLEGLMRKIGRNAP*
Ga0066672_101094693	3300005167	Soil	MDLHLDDEEEQFLAELLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKRKVGTPAGT
Ga0066677_102001612	3300005171	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLG*
Ga0066677_102328022	3300005171	Soil	MDLEITNEEQEFLVEVLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKRKVGTPAGT
Ga0066677_105299901	3300005171	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQIAA*
Ga0066673_102196123	3300005175	Soil	MNLDITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEILEALMRKLGQTAA*
Ga0066679_103784701	3300005176	Soil	MNLQITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQIAA*
Ga0066688_103113751	3300005178	Soil	LNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQIAA*
Ga0066684_100393612	3300005179	Soil	MDLEITNEEQEFLVEVLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKLKVGTPAGAR*
Ga0066685_108534871	3300005180	Soil	TEEERELLNEILEEKQKRMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQTVS*
Ga0066678_106479242	3300005181	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQTVS*
Ga0066671_103115262	3300005184	Soil	MNLDITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEMLEALMRKLGQTAA*
Ga0066388_1000166323	3300005332	Tropical Forest Soil	MNLEITDEERDFLNELFEEKQERLIEEINHTDTRDFRSLLKKKIEVLEGLMRKIGQRTR*
Ga0070674_1003238371	3300005356	Miscanthus Rhizosphere	MNLEITDEERQFLNELFDDKQRHLIQELNHTDTNDFELMLRQKIELLEGLMGKVGKP*
Ga0070703_100001669	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MNLEITNEEREFLGELFEEKQNHLIQEINHSDTIDFKRMLRKKIEVLEGLMRKIGPDTR*
Ga0070709_102884502	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNVEITDEERDFLSELLEEKQKHMIQEINHTDTIDFERMLKKKLEVLEGLMRKIGQSSP*
Ga0070713_1014591311	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNVEITDEEREFLSELLEEKQKHMIQEINHTDTLDFERMLKKKLEVLEGLMRKIGQSSP*
Ga0070708_1013053332	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNVEITDQERDFLSELFEEKQKHMIQEINHTDTIDFERLLKTKLEVLEELMRKIGQSAR*
Ga0066681_106897511	3300005451	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQTAA*
Ga0070706_1003362572	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQMAA*
Ga0070698_1002282902	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNLEITEAERELLNEILEEKQKRMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGASVA*
Ga0070699_1003883112	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNLEITDQEQDFLREVLEEKHEHMIQEIDHTDTIEFERMLRKKLEVLEGLKRKIEA*
Ga0070741_10000003789	3300005529	Surface Soil	MNVEITDDERDFLKEVFEEKQKHMIQEINHTDTIDFERMLKQKLDVLEGLMRKIGVA*
Ga0066697_106919221	3300005540	Soil	GKKRMNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQTAA*
Ga0070704_1000149562	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MNLEITDEEREFLGELFEEKQKHMIQEINHTDTIDFERLLRKKIDVLEALMRKIGQDVR*
Ga0070704_1008760702	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MNLEITVDEQDFLRELLEEKHKRMIQEIDHTDTIDFERMLKQKLEVLEGLKEKVDASQPASC*
Ga0066670_103674282	3300005560	Soil	MNLDITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEMLEALIRKLGQTAA*
Ga0066670_104116672	3300005560	Soil	MDLEITNEEQEFLVEVLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKLKVGTPAAAR*
Ga0066703_103132112	3300005568	Soil	MDLEITNEEEEFLVEVLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKRKVGTPAGAR*
Ga0066702_109632131	3300005575	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEMLEALMRKLGQTAA*
Ga0066706_106791882	3300005598	Soil	MDLEITNEEQEFLVEVLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKRKVGTPAGAR*
Ga0066905_1002062862	3300005713	Tropical Forest Soil	MNLEITDEERDFLYDLFEEKQNRLIEEINHTDTIHFKRLLRKKIEVLEGLMRKIGQGTR*
Ga0066696_102094932	3300006032	Soil	MDLEITNEEQEFLVEVLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKLKVGTPEGAR*
Ga0066656_111261222	3300006034	Soil	MNLDITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLE
Ga0066658_100776441	3300006794	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQTAA*
Ga0066658_103602013	3300006794	Soil	MNLEITEEEREVLNEIFEEKQKHMIHELNHTDTLDFERMLKKKIEVLEGLMRKLGQVTT*
Ga0066665_102176973	3300006796	Soil	MDLEITKEEQVFLAELLEEKHKRMIQELDHTDTIDFGRMLKKKLEVLEGLKRKVGTRESGV*
Ga0066659_105223261	3300006797	Soil	RRRREPEIMDLHLDDEEEQFLAELLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKRKVGTPAGT*
Ga0066659_109327802	3300006797	Soil	MNLEITDDERDFLSELFEEKQKHMIQEINHTDTIDFERMLKKKLEVLEGLMRKIGRNAP*
Ga0066659_110516193	3300006797	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQMAE*
Ga0079221_114842072	3300006804	Agricultural Soil	MNLDITEEERELLNEIFEEKQKHMIQELNHTDTLAFERMLKKKIEALEGLMRKLGQAAA*
Ga0075425_10000000893	3300006854	Populus Rhizosphere	MNVEITDEERDFLNELLEEKQKHMIQEINHTDTIDFERMLKKKLEVLEGLMRKTGQSSP*
Ga0066710_1035737761	3300009012	Grasslands Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQT
Ga0099829_110756301	3300009038	Vadose Zone Soil	EERDFLNELFEEKQKHMIQEINHTDTIDFERLLKKKLEVLEELMRKIGQSAR*
Ga0099830_116568213	3300009088	Vadose Zone Soil	MNVEITDQERDFLSELFEEKQKHMIQEINHTDTIDFERLLKKKLEVLEELMRKIGQGAR*
Ga0099828_113076231	3300009089	Vadose Zone Soil	MNLEITEEDRELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQMAA*
Ga0066709_1009571332	3300009137	Grasslands Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTIEFERMLKKKIVVLEELMRKLGQMAG*
Ga0126380_114167261	3300010043	Tropical Forest Soil	MNLEITNEERDFLSELFEEKQKHLIREINHTDTLDFERMLRTKIEVLEGLMRKLGELSGT
Ga0126382_100102432	3300010047	Tropical Forest Soil	MNLEITNEERDFLNDLFEEKQNRLIEEINHTDTIHFKRLLRKKIEVLEGLMRKIGQRTR*
Ga0134082_103154521	3300010303	Grasslands Soil	MNLEITEEERELMNEILEEKQKRMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQTVS*
Ga0134086_103008761	3300010323	Grasslands Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLM
Ga0134111_100885831	3300010329	Grasslands Soil	ITEEERELLNEIFEEKQKRMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQTVS*
Ga0134063_101890292	3300010335	Grasslands Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEILEALMRKLGQTAA*
Ga0126376_101833052	3300010359	Tropical Forest Soil	MNVEITDEEREFLKELFAEKQKHMIQEINHTDTIDFERMLKQQLAVLEGLMKKVGTA*
Ga0126377_126984491	3300010362	Tropical Forest Soil	RCMNLEITDEERDFLYDLFEEKQNRLIEEINHTDTIHFKRLLRKKIEVLEGLMRKIGQGTR*
Ga0126377_127522621	3300010362	Tropical Forest Soil	ERDFLSELFEEKQKHLIREINHTDTLDFERMLRTKIEVLEGLMRKLGELSGT*
Ga0134124_101853563	3300010397	Terrestrial Soil	MNLDITDEERQFLNEVFDEKQKHLIQELNHTDTLDFERMLRQKIELLEGLMRKVGSP*
Ga0134122_125140841	3300010400	Terrestrial Soil	MNLEITDEERQFLNELFDEKQKHLIQEINHTDTNDFELMLRQKIELLEGLMGKVGKP*
Ga0134121_101023203	3300010401	Terrestrial Soil	MNLDITDEEREFLNELFEDKQKHLIQEINHTDTIDFERMLRAKIEVLEGLMRKLDVN*
Ga0134121_101648461	3300010401	Terrestrial Soil	MNLEITNEEREFLGELFEEKQNHLIQEINHSDTIDFKRMLRKKIEVLEGLM
Ga0137382_109826601	3300012200	Vadose Zone Soil	MNLEINDEEREFLGELFEEKQKHMIQEINHTDTVDFERLLRKKIEVLEGLMQKIGQDVH*
Ga0137380_100353603	3300012206	Vadose Zone Soil	MNVEITDQERDFLSELFEEKQKHMIQEINHTDTIDFERLLKKKLEVLEELMRKIGQSAR*
Ga0137381_103013902	3300012207	Vadose Zone Soil	MNVEITDEERDFLNELFEEKQKHMIQEINHTDTIDFERLLKKKLEVLEELMRKIGQSAR*
Ga0137376_104721503	3300012208	Vadose Zone Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTIEFERMLKKKIEVLEELMRKLGQMAA*
Ga0137379_108375731	3300012209	Vadose Zone Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQMTA*
Ga0137377_110221142	3300012211	Vadose Zone Soil	MNLEITEEERELLHEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGKTAG*
Ga0150985_1082792801	3300012212	Avena Fatua Rhizosphere	TMNLEISDQEHELLAELFEEKQKHLIHEINHTDTIDFERLLKNKIEVLEGLMRKLGQDPR
Ga0137387_112704602	3300012349	Vadose Zone Soil	DLHLDDEEEQFLAELLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKRKVGTPAGT*
Ga0137372_105115112	3300012350	Vadose Zone Soil	MNLEITDEERALLGELFEEKQKHMIQEINHTDTIDFERMLKKKLEVLEGLMRKIGQSVA*
Ga0137367_100592173	3300012353	Vadose Zone Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKSEVLEGLMRKLGQTTA*
Ga0137369_101753463	3300012355	Vadose Zone Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQTTA*
Ga0137369_108142381	3300012355	Vadose Zone Soil	TNPMNLEITDEEREFLSELFDEKQKHMIQEINHTDTIDFERLLKKKIEVLEGLMSKLGQSVR*
Ga0137384_105259982	3300012357	Vadose Zone Soil	MNLEITDEERDFLSELFEEKQIHMIQEINHTDTIDFERLLKKKLEVLEELMRKIGQGAR*
Ga0137361_100238522	3300012362	Vadose Zone Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKVEVLEGLMRKLGQTAG*
Ga0134041_12634092	3300012405	Grasslands Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGLMAA*
Ga0137395_103387482	3300012917	Vadose Zone Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERILKKKIEVLEGLMRKLGQTAA*
Ga0137396_102182021	3300012918	Vadose Zone Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLEFERMLKKKIEVLEGLMRKLGQVTA*
Ga0137359_100842102	3300012923	Vadose Zone Soil	MNLEMTDDERDFLSELFEEKQKHMIQEINHTDTIDFERMLKKKLEVLEGLMRKIGQSAP*
Ga0126375_101962282	3300012948	Tropical Forest Soil	MNLEITDEERDFLIELFDEKQKHLIQEINHTDTIDFERLLRKKIDVLEGLMGKIGIRDR*
Ga0134110_102630652	3300012975	Grasslands Soil	MDLEINNEEQEFLVEVLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIK
Ga0134112_104269691	3300017656	Grasslands Soil	MDLEITKEEQVFLAELLEEKHKRMIQELDHTDTIDFGRMLKKKLEVLEGLKRKVGTPESG
Ga0066655_100258623	3300018431	Grasslands Soil	MNLEITEEERELLNEILEEKQKRMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQTVS
Ga0066655_103565382	3300018431	Grasslands Soil	MDLEITNEEQEFLVEVLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKLKVGTPEGA
Ga0066667_119843482	3300018433	Grasslands Soil	MNLQITEEERELLNEIFEEKQKHMIHELNHTDTLDFERMLKKKIEVLEGLMGKLGQTAA
Ga0066662_101237872	3300018468	Grasslands Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQIAA
Ga0066669_111761701	3300018482	Grasslands Soil	ITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQTAA
Ga0066669_121357391	3300018482	Grasslands Soil	ITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEMLEALMRKLGQTAA
Ga0193747_10008992	3300019885	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQTAA
Ga0247672_10448142	3300024187	Soil	MDVEITNEERDFLSELFEEKQKHMIQEINHTDTIDYERMLKKKLEVLEGLMRKIGQSSP
Ga0207653_100005339	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MNLEITNEEREFLGELFEEKQNHLIQEINHSDTIDFKRMLRKKIEVLEGLMRKIGPDTR
Ga0207684_102672243	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQMAA
Ga0207646_112999872	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNLEITEEERELLNEIFEEKQKHMINELNHTDTLNFERMLKKKIEVLEGLMRKLGQTAA
Ga0207669_104974702	3300025937	Miscanthus Rhizosphere	MNLEITDEERQFLNELFDEKQKHLIQELNHTDTNDFELMLRQKIELLEGLMGKVGKP
Ga0209237_12202082	3300026297	Grasslands Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQIAG
Ga0209027_11338502	3300026300	Grasslands Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQIAA
Ga0209055_12076661	3300026309	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLG
Ga0209153_12150942	3300026312	Soil	MNLDITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEMLEALMRKLGQTAA
Ga0209154_10944962	3300026317	Soil	MNLEITDDERDFLSELFEEKQKHMIQEINHTDTIDFERMLKTKLEVLEGLMRKIGRNAP
Ga0209471_12508221	3300026318	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGRMAA
Ga0209152_101613841	3300026325	Soil	NGEHRVFPIKRKGKKRMNLEITEEEREVLNEIFEEKQKHMIHELNHTDTLDFERMLKKKIEVLEGLMRKLGQVTT
Ga0209473_12325563	3300026330	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEMLEALMRKLGQTAA
Ga0209059_12429752	3300026527	Soil	MNLQITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEMLEALMRKLGQTAA
Ga0209157_12136912	3300026537	Soil	MNLEITEEERELLNEIFEEKQKRMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQTVS
Ga0209056_103815392	3300026538	Soil	MDLEITKEEQVFLAELLEEKHKRMIQELDHTDTIDFGRMLKKKLEVLEGLKRKVGTRESG
Ga0209474_101766762	3300026550	Soil	MDLEITNEEQEFLVEVLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKLKVGTPAAA
Ga0209648_101774422	3300026551	Grasslands Soil	MNLEITEEERELLSEIFEEKQKHMIHELNHTDTLNFERMLKTKIEVLEGLMRKVGQMAA
Ga0209577_101730204	3300026552	Soil	MDLHLDDEEEQFLAELLEEKHKRMIQELDHTDTIAFERMLKKKLEVLEGIKLKVGTPEGA
Ga0209577_104185492	3300026552	Soil	MNLEITEEERELLNEIFEEKQKHMIHELNHTDTIEFERMLKKKIEVLEGLMRKLGQTAA
Ga0209577_105489721	3300026552	Soil	MNLQITEEERELLNEIFEEKQKHMIHELNHTDTLNFERMLKKKIEVLEGLMRKLGQIAA
Ga0307469_106144971	3300031720	Hardwood Forest Soil	MNVEITDDERDFLSELFEEKQKHMIREINHTDTIDFERMLKKKLQVLEELMRKIGQGVA
Ga0307469_113478632	3300031720	Hardwood Forest Soil	MNMEITEDERDFLSELFEEKQKHMIQEINHTDTNDFEQMLKRKLEVLEGLMRKIGQGVA
Ga0307472_1004184212	3300032205	Hardwood Forest Soil	MNLEITDEERELLDELFEEKQKHMIQEINHTDTIDFERLLKKKLEMLEGLMQKVGQSPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077116

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences