Metagenome / Metatranscriptome Family F077083

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077083
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	103 residues
Representative Sequence	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL
Number of Associated Samples	91
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.86 %
% of genes near scaffold ends (potentially truncated)	35.04 %
% of genes from short scaffolds (< 2000 bps)	70.94 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.291 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.641 % of family members)
Environment Ontology (ENVO)	Unclassified (56.410 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.829 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.81% β-sheet: 3.74% Coil/Unstructured: 36.45%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF08281	Sigma70_r4_2	22.22
PF09411	PagL	11.11
PF02954	HTH_8	5.98
PF06912	DUF1275	1.71
PF09335	SNARE_assoc	1.71
PF13185	GAF_2	1.71
PF04542	Sigma70_r2	1.71
PF06170	DUF983	0.85
PF02687	FtsX	0.85
PF00027	cNMP_binding	0.85
PF07992	Pyr_redox_2	0.85
PF01527	HTH_Tnp_1	0.85
PF03807	F420_oxidored	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.71
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.71
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.71
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.71
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.71
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.71
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	1.71
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.71
COG5349	Uncharacterized conserved protein, DUF983 family	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.29 %
Unclassified	root	N/A	1.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.29 %
Unclassified	root	N/A	1.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.29 %
Unclassified	root	N/A	1.71 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	70.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
Unclassified	root	N/A	1.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	70.09 %
Unclassified	root	N/A	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	70.09 %
Unclassified	root	N/A	1.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	68.38 %
Unclassified	root	N/A	1.71 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.85 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.85 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	68.38 %
Unclassified	root	N/A	1.71 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.85 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.85 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	68.38 %
Unclassified	root	N/A	1.71 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples	0.85 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.85 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	68.38 %
Unclassified	root	N/A	1.71 %
uncultured Microvirga sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.	0.85 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10004335	All Organisms → cellular organisms → Bacteria	4941	Open in IMG/M
3300002558\|JGI25385J37094_10136558	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	672	Open in IMG/M
3300002560\|JGI25383J37093_10116166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	761	Open in IMG/M
3300002561\|JGI25384J37096_10052380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1546	Open in IMG/M
3300002562\|JGI25382J37095_10170112	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300002562\|JGI25382J37095_10246017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300002908\|JGI25382J43887_10019289	All Organisms → cellular organisms → Bacteria	3609	Open in IMG/M
3300002908\|JGI25382J43887_10079540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1763	Open in IMG/M
3300002912\|JGI25386J43895_10031212	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1570	Open in IMG/M
3300002912\|JGI25386J43895_10097396	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	760	Open in IMG/M
3300005166\|Ga0066674_10023741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2672	Open in IMG/M
3300005174\|Ga0066680_10126791	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1583	Open in IMG/M
3300005174\|Ga0066680_10252077	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1122	Open in IMG/M
3300005176\|Ga0066679_10168591	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1381	Open in IMG/M
3300005181\|Ga0066678_10033436	All Organisms → cellular organisms → Bacteria	2822	Open in IMG/M
3300005332\|Ga0066388_100085338	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3553	Open in IMG/M
3300005447\|Ga0066689_10173032	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300005451\|Ga0066681_10088002	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1761	Open in IMG/M
3300005553\|Ga0066695_10758118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300005554\|Ga0066661_10544835	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300005555\|Ga0066692_10144991	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1453	Open in IMG/M
3300005555\|Ga0066692_10505374	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	769	Open in IMG/M
3300005556\|Ga0066707_10464445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	821	Open in IMG/M
3300005557\|Ga0066704_10522682	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	778	Open in IMG/M
3300005557\|Ga0066704_10573026	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300005558\|Ga0066698_10093357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1977	Open in IMG/M
3300005559\|Ga0066700_10096560	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1928	Open in IMG/M
3300005568\|Ga0066703_10018084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3576	Open in IMG/M
3300005569\|Ga0066705_10561800	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	706	Open in IMG/M
3300005598\|Ga0066706_11448228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300005719\|Ga0068861_100414750	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300005983\|Ga0081540_1041859	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2369	Open in IMG/M
3300006049\|Ga0075417_10021589	All Organisms → cellular organisms → Bacteria	2571	Open in IMG/M
3300006796\|Ga0066665_10954195	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	660	Open in IMG/M
3300006844\|Ga0075428_100458483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1365	Open in IMG/M
3300006844\|Ga0075428_102001155	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300006844\|Ga0075428_102006925	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300006845\|Ga0075421_100243773	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300006845\|Ga0075421_102347348	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300006845\|Ga0075421_102445218	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300006846\|Ga0075430_100007001	All Organisms → cellular organisms → Bacteria	9506	Open in IMG/M
3300006854\|Ga0075425_100460970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1464	Open in IMG/M
3300006914\|Ga0075436_100360594	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1049	Open in IMG/M
3300006969\|Ga0075419_10861242	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300007076\|Ga0075435_100247204	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300007255\|Ga0099791_10065348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1643	Open in IMG/M
3300007258\|Ga0099793_10350376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	721	Open in IMG/M
3300007265\|Ga0099794_10774061	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300009012\|Ga0066710_100731765	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300010047\|Ga0126382_10508805	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	970	Open in IMG/M
3300010126\|Ga0127482_1081604	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	778	Open in IMG/M
3300010127\|Ga0127489_1055716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	809	Open in IMG/M
3300010337\|Ga0134062_10062141	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1543	Open in IMG/M
3300010359\|Ga0126376_10095917	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2248	Open in IMG/M
3300010362\|Ga0126377_10013977	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6384	Open in IMG/M
3300012199\|Ga0137383_10297557	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1182	Open in IMG/M
3300012203\|Ga0137399_10074086	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2562	Open in IMG/M
3300012203\|Ga0137399_11152282	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300012207\|Ga0137381_11200457	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	652	Open in IMG/M
3300012208\|Ga0137376_10403019	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1188	Open in IMG/M
3300012362\|Ga0137361_10066549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3035	Open in IMG/M
3300012362\|Ga0137361_10190859	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1850	Open in IMG/M
3300012391\|Ga0134035_1130390	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300012396\|Ga0134057_1291679	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300012398\|Ga0134051_1266003	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300012400\|Ga0134048_1388168	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	949	Open in IMG/M
3300012401\|Ga0134055_1090513	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300012402\|Ga0134059_1357633	Not Available	539	Open in IMG/M
3300012403\|Ga0134049_1085941	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	722	Open in IMG/M
3300012404\|Ga0134024_1268181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300012410\|Ga0134060_1157110	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	860	Open in IMG/M
3300012922\|Ga0137394_10177715	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1815	Open in IMG/M
3300012925\|Ga0137419_10158939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1639	Open in IMG/M
3300012927\|Ga0137416_10202641	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1593	Open in IMG/M
3300012929\|Ga0137404_10019871	All Organisms → cellular organisms → Bacteria	4828	Open in IMG/M
3300012930\|Ga0137407_10023924	All Organisms → cellular organisms → Bacteria	4645	Open in IMG/M
3300012930\|Ga0137407_10200538	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1789	Open in IMG/M
3300012930\|Ga0137407_10366415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1329	Open in IMG/M
3300012930\|Ga0137407_12309566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300015052\|Ga0137411_1120234	All Organisms → cellular organisms → Bacteria	3809	Open in IMG/M
3300015264\|Ga0137403_11492151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300015372\|Ga0132256_100125806	All Organisms → cellular organisms → Bacteria	2536	Open in IMG/M
3300018431\|Ga0066655_10019270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3147	Open in IMG/M
3300018431\|Ga0066655_10654296	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	710	Open in IMG/M
3300018433\|Ga0066667_10024578	All Organisms → cellular organisms → Bacteria	3276	Open in IMG/M
3300018468\|Ga0066662_10135545	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1830	Open in IMG/M
3300018468\|Ga0066662_10276102	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300019789\|Ga0137408_1182381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1519	Open in IMG/M
3300020170\|Ga0179594_10417849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300026118\|Ga0207675_100280468	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300026277\|Ga0209350_1144154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300026296\|Ga0209235_1032193	All Organisms → cellular organisms → Bacteria	2691	Open in IMG/M
3300026296\|Ga0209235_1043644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2210	Open in IMG/M
3300026296\|Ga0209235_1084249	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300026297\|Ga0209237_1030516	All Organisms → cellular organisms → Bacteria	2948	Open in IMG/M
3300026297\|Ga0209237_1078792	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300026298\|Ga0209236_1023085	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3445	Open in IMG/M
3300026298\|Ga0209236_1043747	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2286	Open in IMG/M
3300026306\|Ga0209468_1004997	All Organisms → cellular organisms → Bacteria	5203	Open in IMG/M
3300026307\|Ga0209469_1042812	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1459	Open in IMG/M
3300026326\|Ga0209801_1038556	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300026326\|Ga0209801_1127026	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1090	Open in IMG/M
3300026332\|Ga0209803_1004621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7999	Open in IMG/M
3300026343\|Ga0209159_1060739	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1794	Open in IMG/M
3300026536\|Ga0209058_1007237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	8353	Open in IMG/M
3300026536\|Ga0209058_1362780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300026547\|Ga0209156_10240011	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300027748\|Ga0209689_1167221	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300027873\|Ga0209814_10021208	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2635	Open in IMG/M
3300027873\|Ga0209814_10051867	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300027880\|Ga0209481_10152712	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1141	Open in IMG/M
3300027909\|Ga0209382_10168737	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2525	Open in IMG/M
3300028536\|Ga0137415_10141581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2244	Open in IMG/M
3300031561\|Ga0318528_10050399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → environmental samples → uncultured Microvirga sp.	2105	Open in IMG/M
3300032180\|Ga0307471_101238790	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	910	Open in IMG/M
3300032205\|Ga0307472_101338202	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.05%
Host-Associated	Host-Associated	17.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.05%
Plants	Host-Associated → Plants	17.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.56%
Loam	Environmental → Terrestrial → Soil → Loam	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	46.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	20.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010127	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100043353	3300002558	Grasslands Soil	MRRVLEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
JGI25385J37094_101365582	3300002558	Grasslands Soil	MSRMRQVLEKSFLVMMVVGSITTWGTPALAYVVDVLISIPVASSEGDALEDAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIVKRLTDAGAYEL*
JGI25383J37093_101161662	3300002560	Grasslands Soil	MRRVLEKSXLIMMVVGXLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
JGI25384J37096_100523802	3300002561	Grasslands Soil	MRRVLEKSXLIMMVVGXLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADXDGAAIVQRLTDGSADEL*
JGI25382J37095_101701122	3300002562	Grasslands Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLAD
JGI25382J37095_102460171	3300002562	Grasslands Soil	MSRMRQVLEKSFLVMMVVGSITTWGTPALAYVVDVLISIPVASSEGDALEDAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFAXDDGAAIMKRLTDAGAYEL*
JGI25382J43887_100192893	3300002908	Grasslands Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
JGI25382J43887_100795402	3300002908	Grasslands Soil	MSRMRQVLEKSFLVMMVVGSITTWGTPALAYVVDVLISIPVASSEGDALEDAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFAGDDGAAIMKRLTDAGAYEL*
JGI25386J43895_100312121	3300002912	Grasslands Soil	MRRVLEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRISILLLLADDDXAAIVQRLXXGSADEL*
JGI25386J43895_100973961	3300002912	Grasslands Soil	MSRMRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL*
Ga0066674_100237412	3300005166	Soil	MRRVLEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0066680_101267913	3300005174	Soil	PASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYIPLLLADDDGAAIVQRLTDGSADEL*
Ga0066680_102520773	3300005174	Soil	MSRMRQVLEKSFLVMMVVGSITTWGTPALAYVVDVLISIPVASSEGDTLEDAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTDAGAYEL*
Ga0066679_101685913	3300005176	Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVCDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0066678_100334363	3300005181	Soil	MSRMRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHICILLLFPDDDGAAIMKRLTGAGADEL*
Ga0066388_1000853383	3300005332	Tropical Forest Soil	MTRVLLKAVLIVIITGSLTALGTPAAAYVAEILTSIQAADGEGDQLEDAVKSAVYDVLQHAIAFVPTVVEVRDVRVVGDRIYILLLIADDDGAAIVGALTETQTPKSP*
Ga0066689_101730324	3300005447	Soil	MRRVLEKSFLIMMVVGGLTALGTPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRI
Ga0066681_100880021	3300005451	Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDG
Ga0066695_107581182	3300005553	Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLL
Ga0066661_105448351	3300005554	Soil	PDLVISRTHGLEAMAPEGDRMRRVLEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYIPLLLADDDGAAIVQRLTDGSADEL*
Ga0066692_101449912	3300005555	Soil	MRRVLEKSFLIMMVVGGLTALGTPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0066692_105053742	3300005555	Soil	MSRMRQVLEKSFLVMMVVGSITTWGTPALAYVVDVLISIPVASSEGDTLEDAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL*
Ga0066707_104644452	3300005556	Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYAAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0066704_105226821	3300005557	Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRI
Ga0066704_105730262	3300005557	Soil	MSRMRQVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTDAGAYEL*
Ga0066698_100933574	3300005558	Soil	GTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL*
Ga0066700_100965602	3300005559	Soil	MSRMRQVLEKSFLVMMVVGSITTWGTPALAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL*
Ga0066703_100180844	3300005568	Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRISILLLLADDDGAAIVQRLTDGSADEL*
Ga0066705_105618002	3300005569	Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYAAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVTTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0066706_114482281	3300005598	Soil	PASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0068861_1004147502	3300005719	Switchgrass Rhizosphere	MSRVLPKSLVVAVVFAGGLLTWGAPAGAYVAQILTSVPAPSGGGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADADKL*
Ga0081540_10418593	3300005983	Tabebuia Heterophylla Rhizosphere	MNRAVPKSLVIAVFAAGLLSWGAPASAYVAQILTSIPASSSEGAQLEAAVRSAINDVLEHAIAFVPTLIDVREAIVVGDRIYILLLVADDEGAAIVNGSRDAKADEL*
Ga0075417_100215894	3300006049	Populus Rhizosphere	MKRTLPKSLVIAVFAAALLARGAPASAYVAQILTSIPASSGEGEQLEAAVRSAINDVLDHAIAFVPTVIDVREAIVVGDRIYILLLLADDDGAAIVNGARDAKADEL*
Ga0075417_106386471	3300006049	Populus Rhizosphere	AYVAQILTSVPAPSGEGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADADKL*
Ga0066665_109541952	3300006796	Soil	VVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL*
Ga0075428_1004584833	3300006844	Populus Rhizosphere	AAALLARGAPASAYVAQILTSIPASSGEGEQLEAAVRSAINDVLDHAIAFVPTVIDVREAIVVGDRIYILLLLADDDGAAIVNGARDAKADEL*
Ga0075428_1020011552	3300006844	Populus Rhizosphere	MSRVLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSGEGEQLEAAVRSAIDDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADADKL*
Ga0075428_1020069252	3300006844	Populus Rhizosphere	MSRLLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSDEGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADADKL*
Ga0075421_1002437734	3300006845	Populus Rhizosphere	MKRTLPKSLVIAVFAAALLARGAPASAYVAQILTSIPASSGEGEQLEAAVRSAINDVLDHAIAFVPTVIDVREAIVVGDRIYILLLLADDDGAAIVNGARDATADEL*
Ga0075421_1023473482	3300006845	Populus Rhizosphere	MSRVLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSGEGEQLEAAVRSAIDDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAA
Ga0075421_1024452182	3300006845	Populus Rhizosphere	MSRLLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSDEGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADD
Ga0075430_1000070014	3300006846	Populus Rhizosphere	MSRLLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSGEGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADADKL*
Ga0075425_1004609702	3300006854	Populus Rhizosphere	MRRALLKSFLIIMVSGSLTALGTPTSAYVAEVLTSIPTASGEGDQLEIAVKAAIKDVLEHAIAFVPTVIDVRDARVVGDPSSSCR*
Ga0075436_1003605942	3300006914	Populus Rhizosphere	MRRALLKSFLIIMVSGSLTALGTPTSAYVAEVLTSIPTASGEGGQLEIAVKAAIKDVLEHAIAFVPTVIDVRDARVVGDPSSSCR*
Ga0075419_108612422	3300006969	Populus Rhizosphere	MSRLLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSDEGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGA
Ga0075435_1002472042	3300007076	Populus Rhizosphere	MRRALLKSFLIIMVSGSLTALGTPTSAYVAAVLTSIPTASGEGDQLEIAVKAAIKDVLEHAIAFVPTVIDVRDARVVGDRIFILLLIADDDGAAIVKSLTEVNAEEL*
Ga0099791_100653483	3300007255	Vadose Zone Soil	MRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL*
Ga0099793_103503762	3300007258	Vadose Zone Soil	MRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALEDAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTDAGAYEL*
Ga0099794_107740611	3300007265	Vadose Zone Soil	MRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDD
Ga0066710_1007317652	3300009012	Grasslands Soil	MSRMRQVLEKSFLVMMVVGSITTWGTPALAYVVDVLISIPVASSEGDTLEDAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTDAGAYEL
Ga0126382_105088052	3300010047	Tropical Forest Soil	MTRVLLKDVLIIIITGSLTALGTPAAAYVAEILTSIQAADGEGDRLEDALKSAVYDVLQHAIAFVPTVVEVRDVRVVGDRVYILLLIADDDGAAIVEALTDIQTPKSP*
Ga0127482_10816041	3300010126	Grasslands Soil	SFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0127489_10557162	3300010127	Grasslands Soil	LTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0134062_100621412	3300010337	Grasslands Soil	LGKPASTYVAHVLTSIPVASSEGRELEGAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0126376_100959173	3300010359	Tropical Forest Soil	MTRVLLKAVLIIIITGSLTALGTPAAAYVAEILTSIQAADGEGDQLEDAVKSAVYDVLQHAIAFVPTVVEVRDVRVVGDRIYIMLLIADDDGAAIVGALTETQTPKSP*
Ga0126377_100139774	3300010362	Tropical Forest Soil	MTRVLLKAVLIIIITGSLTALGTPAAAYVAEILTSIQAADGEGDQLEDAVKSAVYDVLQHAIAFVPTVVEVRDVRVVGDRIYILLLIADDDGAAIVGALTETQTPKSP*
Ga0137383_102975573	3300012199	Vadose Zone Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0137399_100740863	3300012203	Vadose Zone Soil	MRRVLEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINEVLEHAIAFVPTLVDVRDARVVGDRIYILLLLAGDDGAAIVQRLTDGSADEL*
Ga0137399_111522822	3300012203	Vadose Zone Soil	MRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLAARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL*
Ga0137381_112004572	3300012207	Vadose Zone Soil	MMVVGGLTALGKPASAYVAHVLTSIPVARSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0137376_104030193	3300012208	Vadose Zone Soil	LGKPASTYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIV*
Ga0137361_100665491	3300012362	Vadose Zone Soil	TALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYIPLLLADDDGAAIVQRLTDGSADEL*
Ga0137361_101908592	3300012362	Vadose Zone Soil	MRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFMPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL*
Ga0134035_11303901	3300012391	Grasslands Soil	DRMRRVLEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0134057_12916792	3300012396	Grasslands Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYCAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRISILLLLADDDGAAIVQRLTDGSADEL*
Ga0134051_12660031	3300012398	Grasslands Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYGAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0134048_13881681	3300012400	Grasslands Soil	PEGDRMRRVLEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0134055_10905132	3300012401	Grasslands Soil	VISRTHGLEAMAPEGDRMRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRISILLLLADDDGAAIVQRLTDGSADEL*
Ga0134059_13576332	3300012402	Grasslands Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYI
Ga0134049_10859411	3300012403	Grasslands Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYAAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTNGSADEL*
Ga0134024_12681811	3300012404	Grasslands Soil	LEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0134060_11571101	3300012410	Grasslands Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYGAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIDILLLLADDDGAAIVQRLTDGSADEL*
Ga0137394_101777153	3300012922	Vadose Zone Soil	MRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTDAGADEL*
Ga0137419_101589391	3300012925	Vadose Zone Soil	KSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVRRLTDGSADEL*
Ga0137416_102026413	3300012927	Vadose Zone Soil	MRRVLKKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0137404_100198714	3300012929	Vadose Zone Soil	MRRVLEKSLLIMMVVGSLNALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLAADDGAAIVQRLTDGSADEL*
Ga0137407_100239246	3300012930	Vadose Zone Soil	MRRVLEKSLLIMMVVGSLNALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL*
Ga0137407_102005384	3300012930	Vadose Zone Soil	MRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGA
Ga0137407_103664152	3300012930	Vadose Zone Soil	MRQVLEKSFLVMMVVGSITTWGTPALAYVVDVLISIPVASSEGDTLEDAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLLADDDGAAIMKRLTDAGAYEL*
Ga0137407_123095662	3300012930	Vadose Zone Soil	TTWGTPALAYVVDVLISIPVASSEGDALEDAVRAAVNDVLDHAIAFVPTVGGVLDARVVGNHVYILLLFADDDGAAIMKRLTGAGADEL*
Ga0137411_11202341	3300015052	Vadose Zone Soil	MRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKQAFDRRRR
Ga0137403_114921511	3300015264	Vadose Zone Soil	TAGGLGYMGRAVAMSRMRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL*
Ga0132256_1001258063	3300015372	Arabidopsis Rhizosphere	MSRVLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSGEGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADANKL*
Ga0066655_100192705	3300018431	Grasslands Soil	LGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL
Ga0066655_106542961	3300018431	Grasslands Soil	RAGARSRMRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL
Ga0066667_100245786	3300018433	Grasslands Soil	MRRVLEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL
Ga0066662_101355452	3300018468	Grasslands Soil	MRRVLEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYIPLLLADDDGAAIVQRLTDGSADEL
Ga0066662_102761023	3300018468	Grasslands Soil	MMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGGLDARVVGNPIYILPTFEDD
Ga0137408_11823812	3300019789	Vadose Zone Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL
Ga0179594_104178491	3300020170	Vadose Zone Soil	DGLGYLGRAVAVSAAPEGDHMRRVLEKSFLIMTVVGSLTAWGTPASAYVAHVLISIPVTTSDGGELEDALSAAINDVIEHAIAFVPTIVGVLDARVVGNHIYLLLLLADDDGAVSMKRLTDAGANEL
Ga0207675_1002804682	3300026118	Switchgrass Rhizosphere	MSRVLPKSLVVAVVFAGGLLTWGAPAGAYVAQILTSVPAPSGGGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADADKL
Ga0209350_11441541	3300026277	Grasslands Soil	LIMMVVGSLTALGKPASAYVAHVLPSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL
Ga0209235_10321933	3300026296	Grasslands Soil	MSRMRQVLEKSFLVMMVVGSITTWGTPALAYVVDVLISIPVASSEGDALEDAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIVKRLTDAGAYEL
Ga0209235_10436443	3300026296	Grasslands Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRISILLLLADDDGAAIVQRLTDGSADEL
Ga0209235_10842493	3300026296	Grasslands Soil	MSRMRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLAARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL
Ga0209237_10305163	3300026297	Grasslands Soil	MSRMRQVLEKSFLVMMVVGSITTWGTPALAYVVDVLISIPVASSEGDALEDAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTDAGAYEL
Ga0209237_10787923	3300026297	Grasslands Soil	MSRMRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL
Ga0209236_10230855	3300026298	Grasslands Soil	MRRVLEKSFLIMMVVGGLTALGTPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL
Ga0209236_10437474	3300026298	Grasslands Soil	MSRMRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVGGVLDARVVGNHVYILLLFADDDGAAIMKRLTGAGADEL
Ga0209468_10049971	3300026306	Soil	LGKPASTYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIAQRLTDGSADEL
Ga0209469_10428123	3300026307	Soil	MRRVLEKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINNVLEHAIAVVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL
Ga0209801_10385563	3300026326	Soil	MSRMRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHICILLLFADDDGAAIMKRLTGAGADEL
Ga0209801_11270263	3300026326	Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYIPLLLADDDGAAIVQRLTDGSADEL
Ga0209803_10046215	3300026332	Soil	MRRVLEKSFLIMMVVGGLTALGTPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYIPLLLADDDGAAIVQRLTDGSADEL
Ga0209159_10607395	3300026343	Soil	VVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL
Ga0209058_100723710	3300026536	Soil	MRRVLGKSFLIMMVVGGLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL
Ga0209058_13627802	3300026536	Soil	GTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVGNHIYILLLFADDDGAAIMKRLTGAGADEL
Ga0209156_102400113	3300026547	Soil	MSRMRRVLEKSFLVMMVVGSLTTWGTPASAYVVDVLISIPVASSEGDALENAVRAAVNDVLDHAIAFVPTVVGVLDARVVRNHIYILLL
Ga0209689_11672213	3300027748	Soil	MRRVLEKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGR
Ga0209814_100212081	3300027873	Populus Rhizosphere	MKRTLPKSLVIAVFAAALLARGAPASAYVAQILTSIPASSGEGEQLEAAVRSAINDVLDHAIAFVPTVIDVREAIVVGDRIYILLLLADDDGAAIVNGARDAKADEL
Ga0209814_100518672	3300027873	Populus Rhizosphere	MSRLLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSGGGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADADKL
Ga0209481_101527122	3300027880	Populus Rhizosphere	MSRLLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSDEGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADA
Ga0209382_101687372	3300027909	Populus Rhizosphere	MSRLLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSGEGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADADKL
Ga0137415_101415813	3300028536	Vadose Zone Soil	MRRVLKKSLLIMMVVGSLTALGKPASAYVAHVLTSIPVASSEGRELEDAVRTAINDVLEHAIAFVPTLVDVRDARVVGDRIYILLLLADDDGAAIVQRLTDGSADEL
Ga0318528_100503993	3300031561	Soil	MWTSPRTLLKTLLVMTIAGTLTAWGTPASPYVAQILTSIPVVAGEGDQFENAVKAAVTDVLEHAIAFVPTVVDVRGARVVGDRIYILLLIADDDGAAVVKALGEGNTEEF
Ga0307471_1012387902	3300032180	Hardwood Forest Soil	MSRVLPKSLVVAVVFAGGLLTWGAPAAAYVAQILTSVPAPSGEGEQLEAAVRSAINDVLEHAIAFVPALIDVRDARVVGDRIYILLLVADDDGAAIVNGASDADADKL
Ga0307472_1013382021	3300032205	Hardwood Forest Soil	MRRALLKSFLIIMVSGSLTALGTPTSAYVAEVLTSIPTASGEGDQLEIAVKAAIKDVLEHAIAFVPTVIDVRDARVVGDRIFILLLIADDDGAAIVKSLTEVNAEEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077083

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences