Metagenome / Metatranscriptome Family F077005

Basic Information
Family ID	F077005
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	60 residues
Representative Sequence	MLPQLPKEEHRPVCHGCGQAKFLPYSIRSGDPATAKARVYCSLACAQLHSPGFTGKDPRQ
Number of Associated Samples	106
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.23 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	64.96 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Most Common Taxonomy
Group	Bacteria (70.940 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.530 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.043 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.95% β-sheet: 11.36% Coil/Unstructured: 80.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF08352	oligo_HPY	22.22
PF00903	Glyoxalase	8.55
PF00487	FA_desaturase	8.55
PF00528	BPD_transp_1	2.56
PF07690	MFS_1	1.71
PF11638	DnaA_N	1.71
PF05494	MlaC	0.85
PF10604	Polyketide_cyc2	0.85
PF02894	GFO_IDH_MocA_C	0.85
PF01391	Collagen	0.85
PF07726	AAA_3	0.85
PF12681	Glyoxalase_2	0.85
PF00313	CSD	0.85
PF10091	Glycoamylase	0.85
PF00118	Cpn60_TCP1	0.85
PF05977	MFS_3	0.85
PF17167	Glyco_hydro_36	0.85
PF13458	Peripla_BP_6	0.85
PF00196	GerE	0.85
PF00072	Response_reg	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	8.55
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	8.55
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.85
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.85
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.94 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.94 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.94 %
Unclassified	root	N/A	29.06 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	36.75 %
Unclassified	root	N/A	29.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.55 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	36.75 %
Unclassified	root	N/A	29.06 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.85 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	35.90 %
Unclassified	root	N/A	29.06 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	33.33 %
Unclassified	root	N/A	29.06 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.85 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	33.33 %
Unclassified	root	N/A	29.06 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.85 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	33.33 %
Unclassified	root	N/A	29.06 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.85 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002886\|JGI25612J43240_1010367	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1364	Open in IMG/M
3300003994\|Ga0055435_10047719	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300003995\|Ga0055438_10019633	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300004062\|Ga0055500_10005707	All Organisms → cellular organisms → Bacteria → Proteobacteria	1884	Open in IMG/M
3300004114\|Ga0062593_102751508	Not Available	561	Open in IMG/M
3300004463\|Ga0063356_100018935	All Organisms → cellular organisms → Bacteria → Proteobacteria	6395	Open in IMG/M
3300004463\|Ga0063356_100036210	All Organisms → cellular organisms → Bacteria	4819	Open in IMG/M
3300004479\|Ga0062595_100326421	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300005176\|Ga0066679_10438403	Not Available	855	Open in IMG/M
3300005206\|Ga0068995_10034089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	859	Open in IMG/M
3300005294\|Ga0065705_10576158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	722	Open in IMG/M
3300005328\|Ga0070676_10027364	All Organisms → cellular organisms → Bacteria → Proteobacteria	3233	Open in IMG/M
3300005329\|Ga0070683_100299684	All Organisms → cellular organisms → Bacteria → Proteobacteria	1529	Open in IMG/M
3300005345\|Ga0070692_10263633	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005406\|Ga0070703_10572508	Not Available	518	Open in IMG/M
3300005444\|Ga0070694_100000282	All Organisms → cellular organisms → Bacteria	27232	Open in IMG/M
3300005536\|Ga0070697_101560849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300005543\|Ga0070672_101731282	Not Available	562	Open in IMG/M
3300005546\|Ga0070696_100043683	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3101	Open in IMG/M
3300005546\|Ga0070696_100366156	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300005546\|Ga0070696_101174490	Not Available	648	Open in IMG/M
3300005549\|Ga0070704_100012374	All Organisms → cellular organisms → Bacteria → Proteobacteria	5270	Open in IMG/M
3300005549\|Ga0070704_100837561	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005876\|Ga0075300_1041624	Not Available	644	Open in IMG/M
3300005890\|Ga0075285_1006290	Not Available	1260	Open in IMG/M
3300006041\|Ga0075023_100036143	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1482	Open in IMG/M
3300006806\|Ga0079220_10974026	Not Available	669	Open in IMG/M
3300006847\|Ga0075431_101779904	Not Available	572	Open in IMG/M
3300006854\|Ga0075425_100067146	All Organisms → cellular organisms → Bacteria	4032	Open in IMG/M
3300007076\|Ga0075435_100012227	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6349	Open in IMG/M
3300009088\|Ga0099830_10306727	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1268	Open in IMG/M
3300009090\|Ga0099827_10123334	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300009551\|Ga0105238_11801299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	644	Open in IMG/M
3300009816\|Ga0105076_1020857	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300009820\|Ga0105085_1100155	Not Available	566	Open in IMG/M
3300010391\|Ga0136847_11368298	Not Available	839	Open in IMG/M
3300010396\|Ga0134126_12330970	Not Available	583	Open in IMG/M
3300012174\|Ga0137338_1038064	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	994	Open in IMG/M
3300012355\|Ga0137369_10585470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	778	Open in IMG/M
3300012896\|Ga0157303_10269303	Not Available	529	Open in IMG/M
3300012922\|Ga0137394_10021753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5147	Open in IMG/M
3300012930\|Ga0137407_11543185	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300012931\|Ga0153915_11648972	Not Available	750	Open in IMG/M
3300012957\|Ga0164303_10146320	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1244	Open in IMG/M
3300014320\|Ga0075342_1086572	Not Available	802	Open in IMG/M
3300014324\|Ga0075352_1002442	All Organisms → cellular organisms → Bacteria → Proteobacteria	3126	Open in IMG/M
3300014884\|Ga0180104_1098110	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	832	Open in IMG/M
3300015053\|Ga0137405_1067320	All Organisms → cellular organisms → Bacteria → Proteobacteria	2774	Open in IMG/M
3300015170\|Ga0120098_1036758	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	661	Open in IMG/M
3300015259\|Ga0180085_1115709	Not Available	795	Open in IMG/M
3300015371\|Ga0132258_11406568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1762	Open in IMG/M
3300015372\|Ga0132256_102598962	Not Available	607	Open in IMG/M
3300017927\|Ga0187824_10017367	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2103	Open in IMG/M
3300017936\|Ga0187821_10204198	Not Available	761	Open in IMG/M
3300017994\|Ga0187822_10004024	Not Available	3197	Open in IMG/M
3300018000\|Ga0184604_10024078	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300018031\|Ga0184634_10033498	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2047	Open in IMG/M
3300018052\|Ga0184638_1169549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	780	Open in IMG/M
3300018053\|Ga0184626_10203759	Not Available	837	Open in IMG/M
3300018055\|Ga0184616_10219308	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300018059\|Ga0184615_10337582	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	836	Open in IMG/M
3300018063\|Ga0184637_10031762	All Organisms → cellular organisms → Bacteria	3200	Open in IMG/M
3300018422\|Ga0190265_10012805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	6396	Open in IMG/M
3300018422\|Ga0190265_10067547	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3209	Open in IMG/M
3300018422\|Ga0190265_10210704	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300018429\|Ga0190272_10783869	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300019458\|Ga0187892_10013838	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9191	Open in IMG/M
3300019458\|Ga0187892_10347868	Not Available	722	Open in IMG/M
3300019869\|Ga0193705_1108098	Not Available	500	Open in IMG/M
3300019882\|Ga0193713_1006878	All Organisms → cellular organisms → Bacteria	3533	Open in IMG/M
3300019882\|Ga0193713_1018915	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M
3300019890\|Ga0193728_1339949	Not Available	545	Open in IMG/M
3300020003\|Ga0193739_1000257	All Organisms → cellular organisms → Bacteria	14841	Open in IMG/M
3300020063\|Ga0180118_1327990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300020580\|Ga0210403_10308006	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1298	Open in IMG/M
3300021078\|Ga0210381_10064729	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1128	Open in IMG/M
3300021088\|Ga0210404_10002126	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	8272	Open in IMG/M
3300021432\|Ga0210384_10007095	All Organisms → cellular organisms → Bacteria	11844	Open in IMG/M
3300021432\|Ga0210384_10571228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1017	Open in IMG/M
3300021445\|Ga0182009_10019692	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2533	Open in IMG/M
3300021972\|Ga0193737_1061213	Not Available	532	Open in IMG/M
3300025160\|Ga0209109_10100078	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300025905\|Ga0207685_10725486	Not Available	543	Open in IMG/M
3300025910\|Ga0207684_10462983	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1088	Open in IMG/M
3300025911\|Ga0207654_10001519	All Organisms → cellular organisms → Bacteria	12209	Open in IMG/M
3300025912\|Ga0207707_11017867	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300025926\|Ga0207659_10199799	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1596	Open in IMG/M
3300025949\|Ga0207667_10017390	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	8092	Open in IMG/M
3300026011\|Ga0208532_1000261	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300026285\|Ga0209438_1000436	All Organisms → cellular organisms → Bacteria	12658	Open in IMG/M
3300026499\|Ga0257181_1034949	Not Available	800	Open in IMG/M
3300027650\|Ga0256866_1064061	Not Available	980	Open in IMG/M
3300027787\|Ga0209074_10496086	Not Available	529	Open in IMG/M
3300027815\|Ga0209726_10031660	All Organisms → cellular organisms → Bacteria	4093	Open in IMG/M
3300027815\|Ga0209726_10053006	All Organisms → cellular organisms → Bacteria → Proteobacteria	2791	Open in IMG/M
3300027862\|Ga0209701_10104471	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300028380\|Ga0268265_11891406	Not Available	603	Open in IMG/M
3300028536\|Ga0137415_10153813	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2136	Open in IMG/M
3300028792\|Ga0307504_10242657	Not Available	656	Open in IMG/M
3300028796\|Ga0307287_10127075	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	966	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1021738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1321	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10085013	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	842	Open in IMG/M
(restricted) 3300031237\|Ga0255334_1012300	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1133	Open in IMG/M
3300031716\|Ga0310813_11798029	Not Available	575	Open in IMG/M
3300031720\|Ga0307469_10151385	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1737	Open in IMG/M
3300031720\|Ga0307469_10804025	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	863	Open in IMG/M
3300032174\|Ga0307470_10019235	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300032180\|Ga0307471_100002232	All Organisms → cellular organisms → Bacteria	11047	Open in IMG/M
3300032205\|Ga0307472_100028915	Not Available	3180	Open in IMG/M
3300032770\|Ga0335085_10005828	All Organisms → cellular organisms → Bacteria → Proteobacteria	19656	Open in IMG/M
3300033233\|Ga0334722_10487606	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300033417\|Ga0214471_10002136	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	15538	Open in IMG/M
3300033432\|Ga0326729_1004898	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2590	Open in IMG/M
3300033433\|Ga0326726_10049114	Not Available	3690	Open in IMG/M
3300033475\|Ga0310811_10213259	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2338	Open in IMG/M
3300033501\|Ga0326732_1004319	Not Available	2837	Open in IMG/M
3300033513\|Ga0316628_100093019	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3349	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.03%
Host-Associated	Host-Associated	11.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Aquatic	Environmental → Aquatic	21.37%
Plants	Host-Associated → Plants	11.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.39%
Sediment	Environmental → Aquatic → Sediment	9.40%
Freshwater	Environmental → Aquatic → Freshwater	8.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.27%
Marine	Environmental → Aquatic → Marine	3.42%
Peat	Environmental → Terrestrial → Peat	2.56%
Cave	Environmental → Terrestrial → Cave	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.17%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.98%
Sand	Environmental → Terrestrial → Soil → Sand	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.42%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.71%
Lake	Environmental → Aquatic → Freshwater → Lake	1.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.71%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.98%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.27%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.71%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.85%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.27%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.56%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.56%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	2.56%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.71%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.71%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	1.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.85%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026011	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031237 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_35cm_T3_129	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033501	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25612J43240_10103672	3300002886	Grasslands Soil	MLPELPKDEERPVCHGCGQAKFLPYSIRSGDPATAKARVYCSIACAQLHTPGFTGKDPRQ
Ga0055435_100477192	3300003994	Natural And Restored Wetlands	MLPELPKEEQRPVCRACGQARFLPYSIRSGDPKTAQASVYCSLACAQVHFPGFTGKDPRQ
Ga0055438_100196331	3300003995	Natural And Restored Wetlands	MLPELPKEEQRPVCRACGQARFLPYSIRSGDPKTAQASVYCSLACAQVH
Ga0055500_100057072	3300004062	Natural And Restored Wetlands	MLPELPKEEQRPVCRTCGQARFLPYSIRSGDPKTAQANVYCSLACAQVHFPGFTGKDPRQ
Ga0062593_1027515081	3300004114	Soil	APQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR*
Ga0063356_1000189356	3300004463	Arabidopsis Thaliana Rhizosphere	MLPELPKEESRRVCHGCGQAKFLPYSIRSGDPKTAVVHVYCSVACAQLHSPGFTGKDPRQ
Ga0063356_1000362106	3300004463	Arabidopsis Thaliana Rhizosphere	MPLTPKDAPQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR*
Ga0062595_1003264212	3300004479	Soil	MLPELPKEEQRRVCDACGKAHFLLYTIRVGKPATAVERGYCSLACARLHVPGFTGQSSGR
Ga0066679_104384032	3300005176	Soil	VLPPLPKEGPRRVCDGCGKPNFLPYSIRTGEPASATERRYCSLMCAQLHFPSFKGGSSGR
Ga0068995_100340892	3300005206	Natural And Restored Wetlands	HWTLVQWPRRSPAASIVVMLPELPKEEQRPVCRTCGQARFLPYSIRSGDPKTAQANVYCSLACAQVHFPGFTGKDPRQ*
Ga0065705_105761581	3300005294	Switchgrass Rhizosphere	AAMLPELPKDEARPVCHGCGLVKFLPYSIRSGDPATAKAWGYCSIACAQLHVPGFTGKDPRQ*
Ga0070676_100273643	3300005328	Miscanthus Rhizosphere	MLPQLPKDEDRPVCHGCGQAKFLPYSIRTGEPATAKAHGYCSIACAQRHSPGFTGKDLRQ
Ga0070683_1002996842	3300005329	Corn Rhizosphere	MPLTPKEAPQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR*
Ga0070692_102636333	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	QLPKDEDRPVCHGCGQAKFLPYSIRTGEPATAKAHGYCSIACAQRHSPGFTGKDLRQ*
Ga0070703_105725081	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	SVEPEMPLTPKEAPQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR*
Ga0070694_10000028226	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MLPPLPKDSPRRVCDGCGKANFLPYSIRTGDPATATERVYCSLACAQLHFPAFTGHASGR
Ga0070697_1015608491	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AMLPQLPKDEQRPTCHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDLRQ*
Ga0070672_1017312821	3300005543	Miscanthus Rhizosphere	QKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR*
Ga0070696_1000436835	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	EMPLTPKEAPQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR
Ga0070696_1003661563	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LESAHFKPTREIAMLPQLPKDEDRPVCHGCGQAKFLPYSIRTGEPATAKAHGYCSIACAQRHSPGFTGKDLRQ*
Ga0070696_1011744902	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VLPPLPKEGPRRVCDGCGKANFLPYSIRTGAPVSATERRYCSLTCAQLHFPSFKG
Ga0070704_1000123744	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MEAAMLPQLPKDEQRPTCHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDLRQ*
Ga0070704_1008375611	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MLPPLPKEGPRRVCDGCGKANFLPYSIRTGAPVSATERRYCSLSCAQLHFPS
Ga0075300_10416241	3300005876	Rice Paddy Soil	MLPPLPKEEPRRVCTGCGKAAFLPYSIRVGEPAIAVERAYCSLACARLHFPSFTGPDAGR
Ga0075285_10062902	3300005890	Rice Paddy Soil	MLPPLPKDSPRRVCDGCGKADFLPYSIRTGDPATATERVYCSLACAQLHFPAFTGHASGR
Ga0075023_1000361432	3300006041	Watersheds	VLPPLPKEGPRRVCDGCGKANFLPYSIRTGAPVSATERRYCSLTCAQLHFPSFKGGSSGR
Ga0079220_109740262	3300006806	Agricultural Soil	MLPQLPAEEPRRVCDGCGKAKFLLYSIRTGEPMIAVERVYCSLACARLHFPGFTGHSSGR
Ga0075431_1017799041	3300006847	Populus Rhizosphere	PRIATTSLEPDMPLTPKDAPQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR*
Ga0075425_1000671462	3300006854	Populus Rhizosphere	MLPQLPKDEQRRVCDGCHTAGFLPYSIRTGEPATAVERVYCSLACARLHFPSFTAQSSGR
Ga0075435_1000122272	3300007076	Populus Rhizosphere	MLPQLPKDEQRRVCDGCRTAGFLPYSIRIGEPATAVERVYCSLACARLHFPGFTGHSSGR
Ga0099830_103067271	3300009088	Vadose Zone Soil	VCDGCGKANFLPYSIRTGAPVSATERRYCSLSCAQLHFPSFKGGSSGR*
Ga0099827_101233342	3300009090	Vadose Zone Soil	MEAAMLPQLPKDEQRPICHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDLRQ*
Ga0105238_118012991	3300009551	Corn Rhizosphere	MPLTPKEAPQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAG
Ga0105076_10208571	3300009816	Groundwater Sand	METGMLPQLPKEEQRKVCDGCGKATFLPYSIRVGERASAVERVYCSLACARLHFPSFKGQNSGR
Ga0105085_11001551	3300009820	Groundwater Sand	METGMLPQLPKEEQRKVCDGCGKATFLPYSIRVGERASAVERVYCSLACARLHFPSFKGQNS
Ga0136847_113682983	3300010391	Freshwater Sediment	MLPQLPQEEHRPVCHGCGQAKFLPYSIRSGDPATAKVRVYCSIACAQLHSP
Ga0134126_123309701	3300010396	Terrestrial Soil	MLPPLPKEGPRRVCDGCGKANFLPYSIRTGEPASATERRYCSLSCAQIHFPRFTG
Ga0137338_10380642	3300012174	Soil	MLPQLPKEEQRRVCHGCGEAKFLPYSIRSGDPKTAVVRVFCSLACAQLHSPGFTGKDPRQ
Ga0137369_105854702	3300012355	Vadose Zone Soil	MEAVMLPQLPKDEQRPICHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDLRQ*
Ga0157303_102693031	3300012896	Soil	ATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR*
Ga0137394_100217533	3300012922	Vadose Zone Soil	METAMLPELPKDEERPVCHGCGQAKFLPYSIRSGDPATAKARVYCSIACAQLHTPGFTGKDPRQ*
Ga0137407_115431851	3300012930	Vadose Zone Soil	MEAAMLPPLPKDEQRPTCHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDLRQ*
Ga0153915_116489722	3300012931	Freshwater Wetlands	MLPPLLKDSPPRRVCDGCGKANFLPYSIRTGDPATATERVYCSLACAQLHFPAFTGHASGR*
Ga0164303_101463202	3300012957	Soil	MLPPLPKEGPRRVCDGCGKANFLPYSIRTGAPVSATERRYCSLSCAQLHFPSFKDGSSRR
Ga0075342_10865722	3300014320	Natural And Restored Wetlands	METAMLPQLPKDEHRPVCHGCGQAKFLPYSIRSGDPATAKVRAYCSIACAQLHSPGFTGKDPRQ*
Ga0075352_10024424	3300014324	Natural And Restored Wetlands	SIVVMLPELPKEEQRPVCRTCGQARFLPYSIRSGDPKTAQANVYCSLACAQVHFPGFTGKDPRQ*
Ga0180104_10981102	3300014884	Soil	MEAAMLPQLPKEEQRRVCHGCGEAKFLPYSIRSGDPKTAVVRVFCSLACAQLHSPGFTGKDPRQ*
Ga0137405_10673201	3300015053	Vadose Zone Soil	QTPDGGRHAAAQLPKDEQRPTCHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDLRQ*
Ga0120098_10367582	3300015170	Fossill	MLPDLPKEEQRRVCHGCGQAKFLPYSIRSGDPKTAVVRVYCSVACAQLHFPGFTGKDPR*
Ga0180085_11157091	3300015259	Soil	MLPQLPKEEQRRVCHGCGEAKFLPYSIRSGDPATATVRVYCSIACAQLHSPGFTGKDPRQ
Ga0132258_114065682	3300015371	Arabidopsis Rhizosphere	MLPPLPKESPRRVCDGCGKANFLPYSIRTGSPASATERVYCSLACARIHFPAFTGHASGR
Ga0132256_1025989621	3300015372	Arabidopsis Rhizosphere	MEALMLPPLPKESPRRVCDGCGKANFLPYSIRTGSPASATERVYCSLACARIHFPAFTGH
Ga0187824_100173673	3300017927	Freshwater Sediment	MLPPLPKESPRRVCDGCGKANFLPYSIRTGSPASATERVYCSLACAQIHFPSFTGHASGR
Ga0187821_102041982	3300017936	Freshwater Sediment	MEALMLPPLPKESPRRVCDGCGKANFLPYSIRTGSPASATERVYCSLACTQIHFPSFTGHASGR
Ga0187822_100040242	3300017994	Freshwater Sediment	MEALMLPPLPKESPRRVCDGCGKANFLPYSIRTGSPASATERVYCSLACAQIHFPSFTGHASGR
Ga0184604_100240782	3300018000	Groundwater Sediment	MLPQLPKDEQRPICHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQVHSPGFTGKDLRQ
Ga0184634_100334984	3300018031	Groundwater Sediment	MLPQLPKEEQRRVCDGCGQAKFLPYSIRSGDPKTAVVRVYCSLACAQLHSPGFTGKDPRQ
Ga0184638_11695491	3300018052	Groundwater Sediment	MLPQLPKEEQRPVCHGCGQAKFLPYSIRSGDPTTAVMRVYCSLACAQLHSPGFTGKDPRQ
Ga0184626_102037592	3300018053	Groundwater Sediment	MLPQLPKEEQRRVCHGCGQAKFLPYSIRSGDPTTAVVRVYCSLACAQLHSPGFTGKDPRQ
Ga0184616_102193083	3300018055	Groundwater Sediment	MLPQLPKEEQRPVCHGCGQAKFLPYSIRSGDPKTAVVRVYCSLACAQLHSPGFTGKDPRQ
Ga0184615_103375821	3300018059	Groundwater Sediment	MLPQLPKEERRPVCHGCGQAKFLPYSIRSGDPQTAVVRVYCSLACAQLHSPGFTGKDPRQ
Ga0184637_100317624	3300018063	Groundwater Sediment	MLPQLPKEEQRPVCHGCGQAKFLPYSIRSGDPTTAVVRVYCSLACAQLHSPGFTGKDPRQ
Ga0190265_100128057	3300018422	Soil	MLPDLPKEEQRRLCHGCGQAKFLPYSIRSGDPKTAVVRVYCSVACAQLHSPGFTGKDLR
Ga0190265_100675477	3300018422	Soil	MLPQLPKEEQRRVCHGCGEAKFLPYSIRTGDPATAVKRVYCSLACARLHFPGFTGQASGR
Ga0190265_102107043	3300018422	Soil	MLPQLSQEEHRPVCHACGQAKFLPYSIRSGDPATATVRVYCSLACAQIHSPGFTGKDPRQ
Ga0190272_107838691	3300018429	Soil	MLPQLPQEEHRPVCHGCGQAKFLPYSIRSGDPATAKARVYCSIACAQIHTPGFTGKDPRQ
Ga0187892_1001383813	3300019458	Bio-Ooze	MLPELPKEEQRRVCHGCGQAKFLPYSIRSGDPKTAVVRVYCSVACAQLHSPGFTGKDGRQ
Ga0187892_103478681	3300019458	Bio-Ooze	MLPELPKEEQRRVCHGCGQAKFLPYSIRSGDPKTAVVRVYCSVACAQLHSPG
Ga0193705_11080981	3300019869	Soil	MLPQLPKDEQRPTCHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQVHSP
Ga0193713_10068782	3300019882	Soil	MLPQLPKDEQRPICHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDLRQ
Ga0193713_10189153	3300019882	Soil	MLPQLPKDEDRPVCHGCGQAKFLPYSIRTGEPATAKARGYCSIACAQRHSPGFTGKDLRQ
Ga0193728_13399492	3300019890	Soil	MLPPLPKEGPRRACDGCGKANFLPYSIRTGAPVSATERRYCSLSCAQLHFPSFKGG
Ga0193739_100025716	3300020003	Soil	MLPQLPKEEQRPVCHGCGQAKFLPYSIRSGDPQTAVVRVYCSLACAQLHSPGFTGKDPRQ
Ga0180118_13279901	3300020063	Groundwater Sediment	MEAAMLPQLPKEEQRRVCHGCGEAKFLPYSIRSGDPKTAVVRVFCSLACAQLHSPGFTGKDPRQ
Ga0210403_103080061	3300020580	Soil	MLPEIPKEENRKVCHGCGKASFLPYSIRVGTPANASQRVYCSLACAQLHFPG
Ga0210381_100647292	3300021078	Groundwater Sediment	MEAAMLPQLPKDEQRPTCHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDLRQ
Ga0210404_100021265	3300021088	Soil	MLPQLPKDEHRRVCDGCRTAGFLPYSIRTGEPSTAVERVYCSLACARLHFPGFTGHSSGR
Ga0210384_100070953	3300021432	Soil	MLPEIPKEENRKVCHGCGKASFLPYSIRVGTPANASQRVYCSLACAQLHFPGYTGHDSGR
Ga0210384_105712283	3300021432	Soil	MLPPLPKEGPRRVCDGCGKANFLPYSIRTGEPVSATERRYCSLSCAQLHFPSFKGGSSGR
Ga0182009_100196925	3300021445	Soil	MPLTPKDAPQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR
Ga0193737_10612132	3300021972	Soil	MLPQLPKDEQRPTCHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDL
Ga0209109_101000783	3300025160	Soil	MLPQLPKEEQRRVCHGCGKASFLPYSIRIGEPATAVEHAYCSLACARLQFPGFTGHDSGR
Ga0207685_107254861	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MLPPLPKEGPRRVCDGCGKANFLPYSIRTGEPVSATERRYCSLSCAQLHFPS
Ga0207684_104629833	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ANVGGVSHKEEICVLPPLPKEGPRRVCDGCGKPNFLPYSIRTGEPASATERRYCSLMCAQLHFPSFKGGSSGR
Ga0207654_100015195	3300025911	Corn Rhizosphere	MPLTPKEAPQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR
Ga0207707_110178673	3300025912	Corn Rhizosphere	EDRPVCHGCGQAKFLPYSIRTGEPATAKAHGYCSIACAQRHSPGFTGKDLRQ
Ga0207659_101997994	3300025926	Miscanthus Rhizosphere	ITSVEREMPLTPKEAPQKVCSGCGTATYLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR
Ga0207667_100173901	3300025949	Corn Rhizosphere	SVEPEMPLTPKDAPQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR
Ga0208532_10002612	3300026011	Rice Paddy Soil	MLPPLPKEAPRRVCDGCGNATFLPYSIRTGEPATAVERVYCSLACARRQFPSFTGQNAGR
Ga0209438_10004363	3300026285	Grasslands Soil	MLPPLPKEGPRRVCDGCGKANFLPYSIRTGAPVSATERRYCSLSCAQLHFPSFKGGSSGR
Ga0257181_10349492	3300026499	Soil	MLPPLPKEGPRRVCDGCGKANFLPYSIRTGEPASATERRYCSLMCAQLHFPSFKGGSSGR
Ga0256866_10640612	3300027650	Soil	MLPQLPKEEHRPVCHGCGQAKFLPYSIRSGDPATAKARVYCSLACAQLHSPGFTGKDPRQ
Ga0209074_104960862	3300027787	Agricultural Soil	MLPQLPKDEQRRVCDGCRTAGFLPYSIRIGEPATAVERVYCSLACARLHFPGF
Ga0209726_100316604	3300027815	Groundwater	MLPQLPNEEQRRVCDGCGQAKFLPYSIRSGDPKTAVVRVYCSLACAQLHSPGFTGKDPRQ
Ga0209726_100530063	3300027815	Groundwater	MLPQLPKEEQRRVCDGCGQAKFLPYSIRSGDPKTAVARVYCSVACAQLHAPGFTGKDPRQ
Ga0209701_101044713	3300027862	Vadose Zone Soil	MLPQLPKEEQRRVCDGCGKATFLPYSIRIGEQATAVERVYCSLACARLHFPSFTAQDSGR
Ga0268265_118914062	3300028380	Switchgrass Rhizosphere	EMPLTPKDAPQKVCSGCGTATFLLYSIRTGEPAIAVERAYCSLACARLHFPTFTPPNAGR
Ga0137415_101538133	3300028536	Vadose Zone Soil	MLPQLPKDEQRPTCHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDLRQ
Ga0307504_102426572	3300028792	Soil	MLPPLPKESPRRVCDGCGKANFLPYSIRTGTPASATERVYCSLACAQLHFPAFTGHASGR
Ga0307287_101270751	3300028796	Soil	PQLPKDEQRPICHGCGQAKFLPYTIRTGEPATAKARGYCSIACAQLHSPGFTGKDLRQ
(restricted) Ga0255311_10217382	3300031150	Sandy Soil	MLPQLPKDEHRPVCQGCGQAKFLPYSIRSGDPATAKVRAYCSIACAQLHSPGFTGKDPRQ
(restricted) Ga0255310_100850132	3300031197	Sandy Soil	MIPELPKDEARPVCHGCGLAKFLPYSIRSGDPATAKARGYCSIACAQLHVPGFTGKDPRQ
(restricted) Ga0255334_10123002	3300031237	Sandy Soil	MLPQLPKDEHRPVCHGCGQAKFLPYSIRSGDPATAKVRAYCSIACAQLHSPGFTGKDPRQ
Ga0310813_117980291	3300031716	Soil	MLPPLPKESPRRVCDGCGKANFLPYSIRTGSPASATERVYCSLACAQLHFPTFTGHASGR
Ga0307469_101513851	3300031720	Hardwood Forest Soil	MLPQLPKDEHRRVCDGCRTAGFLPYSIRIGEPATAVERVYCSVACARLHFPNFTGQSS
Ga0307469_108040252	3300031720	Hardwood Forest Soil	MLPELPKEETRRVCHGCGQAKFLPYSIRSGDPKTAVVRVYCSVACAQLHSPGFTGKDPRQ
Ga0307470_100192355	3300032174	Hardwood Forest Soil	MAARPARGYDLAMLPQLPKDEQRPVCHGCGEAKFLPYSIRSGDPATAKARGYCSIACAQLHVPGFTGKDPRQ
Ga0307471_1000022323	3300032180	Hardwood Forest Soil	MLPPLPKEGPRRVCDGCGKANFLPYSIRTGAPVSATERRYCSLSCAQLHFPSFKGGGSGR
Ga0307472_1000289153	3300032205	Hardwood Forest Soil	MLPPLPKEGPRRVCDGCGKANFLPYSIRTGAPVSATERRYCSLSCAQLHFPSFKGRSSGR
Ga0335085_1000582815	3300032770	Soil	MLPPLSNQEHRRLCDGCGKANFLRYSIRIGEPATAVDRVYCSLACAQLHFPAYRGEPSGR
Ga0334722_104876062	3300033233	Sediment	MLPQLPQEEHRPVCHGCGQAKFLPYSIRSGDPATAKARVYCSIACAQIHSPGFTGKDPRQ
Ga0214471_100021369	3300033417	Soil	MLPQLPKEEQRPVCHGCGQAKFLPYSIRTGDPKTAVVRVFCSLACAQLHAPGFTGKDPRQ
Ga0326729_10048983	3300033432	Peat Soil	MLPPLPKESPRRVCDGCGKPNFLPYSIRTGSPASATERVYCSLACAQLHFPTFTGHASGR
Ga0326726_100491143	3300033433	Peat Soil	MLPPLPKDSPRRVCDGCGKANFLPYSIRTGDPATAKERVYCSLACAQLHFPAFTGHASGR
Ga0310811_102132593	3300033475	Soil	AQPMEVLMLPPLPKESPRRVCDGCGKANFLPYSIRTGSPASATERVYCSLACAQLHFPTFTGHASGR
Ga0326732_10043192	3300033501	Peat Soil	MLPPLPKESPRKVCDGCGKPNFLPYSIRTGSPASATERVYCSLACAQLHFPTFTGHASGR
Ga0316628_1000930195	3300033513	Soil	MLPPLPKDSPRRVCDGCGKANFLPYSIRTGDPATATEHVYCSLACAQLHFPAFTGHASGR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters