Metagenome Family F076989

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076989
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	81 residues
Representative Sequence	GMSVEEVKTDGDFTHFVWMATANMAGLEKIGAAFAADRQRRTEDERKAINDLFTDVTEPDKARSIVTRSRIFRLPASK
Number of Associated Samples	97
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.56 %
% of genes near scaffold ends (potentially truncated)	94.87 %
% of genes from short scaffolds (< 2000 bps)	94.87 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.581 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (8.547 % of family members)
Environment Ontology (ENVO)	Unclassified (48.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.30% β-sheet: 0.00% Coil/Unstructured: 71.70%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF14534	DUF4440	3.42
PF00578	AhpC-TSA	2.56
PF14559	TPR_19	1.71
PF13231	PMT_2	1.71
PF08241	Methyltransf_11	0.85
PF01839	FG-GAP	0.85
PF07719	TPR_2	0.85
PF03575	Peptidase_S51	0.85
PF13517	FG-GAP_3	0.85
PF04389	Peptidase_M28	0.85
PF01909	NTP_transf_2	0.85
PF09335	SNARE_assoc	0.85
PF10988	DUF2807	0.85
PF16884	ADH_N_2	0.85
PF08502	LeuA_dimer	0.85
PF01927	Mut7-C	0.85
PF03681	Obsolete Pfam Family	0.85
PF00581	Rhodanese	0.85
PF13548	DUF4126	0.85
PF03795	YCII	0.85
PF13432	TPR_16	0.85
PF04392	ABC_sub_bind	0.85
PF02604	PhdYeFM_antitox	0.85
PF10543	ORF6N	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0119	Isopropylmalate/homocitrate/citramalate synthases	Amino acid transport and metabolism [E]	0.85
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.85
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.85
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.85
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.85
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.85
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.58 %
Unclassified	root	N/A	3.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.58 %
Unclassified	root	N/A	3.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.58 %
Unclassified	root	N/A	3.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.21 %
Unclassified	root	N/A	3.42 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	68.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.98 %
Unclassified	root	N/A	3.42 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	65.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.98 %
Unclassified	root	N/A	3.42 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.71 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	65.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.98 %
Unclassified	root	N/A	3.42 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	65.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.98 %
Unclassified	root	N/A	3.42 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	65.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.98 %
Unclassified	root	N/A	3.42 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	65.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.98 %
Unclassified	root	N/A	3.42 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.71 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c1633201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	518	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104245932	Not Available	770	Open in IMG/M
3300000891\|JGI10214J12806_10172340	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300000891\|JGI10214J12806_10244379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1131	Open in IMG/M
3300000953\|JGI11615J12901_11200198	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300001139\|JGI10220J13317_11514369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	659	Open in IMG/M
3300001990\|JGI24737J22298_10250690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	523	Open in IMG/M
3300003324\|soilH2_10018002	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300004156\|Ga0062589_102801733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	508	Open in IMG/M
3300004157\|Ga0062590_102108352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	588	Open in IMG/M
3300004779\|Ga0062380_10092649	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300004808\|Ga0062381_10073677	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300005328\|Ga0070676_10509549	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300005334\|Ga0068869_100050318	All Organisms → cellular organisms → Bacteria	3020	Open in IMG/M
3300005341\|Ga0070691_10773349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300005345\|Ga0070692_10268451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1029	Open in IMG/M
3300005345\|Ga0070692_10990067	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	587	Open in IMG/M
3300005364\|Ga0070673_101370476	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	665	Open in IMG/M
3300005365\|Ga0070688_101117835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	630	Open in IMG/M
3300005441\|Ga0070700_100035608	All Organisms → cellular organisms → Bacteria	3014	Open in IMG/M
3300005441\|Ga0070700_100621376	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	849	Open in IMG/M
3300005455\|Ga0070663_101400405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	619	Open in IMG/M
3300005459\|Ga0068867_101566229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	615	Open in IMG/M
3300005468\|Ga0070707_101696386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	599	Open in IMG/M
3300005471\|Ga0070698_101602339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	603	Open in IMG/M
3300005543\|Ga0070672_102076521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	512	Open in IMG/M
3300005544\|Ga0070686_100120900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1798	Open in IMG/M
3300005547\|Ga0070693_101440799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	536	Open in IMG/M
3300005549\|Ga0070704_102277767	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	504	Open in IMG/M
3300005577\|Ga0068857_100386184	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300005577\|Ga0068857_101936165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	578	Open in IMG/M
3300005617\|Ga0068859_101512354	Not Available	741	Open in IMG/M
3300005719\|Ga0068861_100814583	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300005840\|Ga0068870_10274008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1055	Open in IMG/M
3300005840\|Ga0068870_10494007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	814	Open in IMG/M
3300005842\|Ga0068858_101980703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	576	Open in IMG/M
3300006844\|Ga0075428_102530422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	525	Open in IMG/M
3300006845\|Ga0075421_101050504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	918	Open in IMG/M
3300006876\|Ga0079217_10172787	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1073	Open in IMG/M
3300006904\|Ga0075424_101100282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300006904\|Ga0075424_102832850	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	505	Open in IMG/M
3300006918\|Ga0079216_10236956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1031	Open in IMG/M
3300006969\|Ga0075419_10168231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1440	Open in IMG/M
3300009098\|Ga0105245_11949401	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	641	Open in IMG/M
3300009148\|Ga0105243_11167420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	781	Open in IMG/M
3300009148\|Ga0105243_11702016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300009148\|Ga0105243_11914254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	626	Open in IMG/M
3300009148\|Ga0105243_12800662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	528	Open in IMG/M
3300009162\|Ga0075423_12143494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	607	Open in IMG/M
3300009174\|Ga0105241_11120971	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	742	Open in IMG/M
3300009174\|Ga0105241_12592835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	509	Open in IMG/M
3300009177\|Ga0105248_10675458	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300009553\|Ga0105249_11432914	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	763	Open in IMG/M
3300010037\|Ga0126304_10606076	Not Available	738	Open in IMG/M
3300010044\|Ga0126310_11257373	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	597	Open in IMG/M
3300010375\|Ga0105239_11387269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	811	Open in IMG/M
3300010397\|Ga0134124_11978201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	620	Open in IMG/M
3300010397\|Ga0134124_12470751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	561	Open in IMG/M
3300010399\|Ga0134127_10921266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300010400\|Ga0134122_10498610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1101	Open in IMG/M
3300010401\|Ga0134121_12777983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	535	Open in IMG/M
3300010403\|Ga0134123_10727003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	975	Open in IMG/M
3300011433\|Ga0137443_1274030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	501	Open in IMG/M
3300012042\|Ga0136627_1041134	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300012043\|Ga0136631_10081577	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1222	Open in IMG/M
3300012093\|Ga0136632_10021921	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2846	Open in IMG/M
3300012668\|Ga0157216_10187058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	986	Open in IMG/M
3300012684\|Ga0136614_10409403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	990	Open in IMG/M
3300012918\|Ga0137396_10764641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	711	Open in IMG/M
3300012961\|Ga0164302_10260050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1108	Open in IMG/M
3300012986\|Ga0164304_10092502	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300013100\|Ga0157373_11132140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	588	Open in IMG/M
3300013297\|Ga0157378_10217334	All Organisms → cellular organisms → Bacteria → Acidobacteria	1815	Open in IMG/M
3300013297\|Ga0157378_11913969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	642	Open in IMG/M
3300013297\|Ga0157378_12335711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	586	Open in IMG/M
3300013308\|Ga0157375_13618205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	514	Open in IMG/M
3300014325\|Ga0163163_10461694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1330	Open in IMG/M
3300014325\|Ga0163163_10809458	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1000	Open in IMG/M
3300014325\|Ga0163163_11652430	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	701	Open in IMG/M
3300014325\|Ga0163163_13107807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	518	Open in IMG/M
3300014326\|Ga0157380_11182549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	808	Open in IMG/M
3300014873\|Ga0180066_1051167	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300014968\|Ga0157379_12619201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	505	Open in IMG/M
3300014969\|Ga0157376_11007001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	856	Open in IMG/M
3300015201\|Ga0173478_10720515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	536	Open in IMG/M
3300015252\|Ga0180075_1066746	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	617	Open in IMG/M
3300015371\|Ga0132258_10738949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2479	Open in IMG/M
3300015371\|Ga0132258_11192841	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300015373\|Ga0132257_103961549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	539	Open in IMG/M
3300015373\|Ga0132257_104536423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	505	Open in IMG/M
3300017789\|Ga0136617_10037398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4317	Open in IMG/M
3300018061\|Ga0184619_10170321	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300018422\|Ga0190265_12312313	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	639	Open in IMG/M
3300018466\|Ga0190268_10179098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1126	Open in IMG/M
3300018469\|Ga0190270_12153911	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	617	Open in IMG/M
3300018469\|Ga0190270_12608133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	568	Open in IMG/M
3300019377\|Ga0190264_11671273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	565	Open in IMG/M
3300019767\|Ga0190267_10980324	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300019874\|Ga0193744_1091576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	570	Open in IMG/M
3300021445\|Ga0182009_10220151	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300025313\|Ga0209431_11167417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	529	Open in IMG/M
3300025911\|Ga0207654_11299900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	530	Open in IMG/M
3300025922\|Ga0207646_11417452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	604	Open in IMG/M
3300025930\|Ga0207701_10849330	Not Available	767	Open in IMG/M
3300025932\|Ga0207690_11774879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	515	Open in IMG/M
3300025942\|Ga0207689_11091264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300025986\|Ga0207658_12008131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	526	Open in IMG/M
3300026035\|Ga0207703_11306639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	698	Open in IMG/M
3300026088\|Ga0207641_10198653	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1848	Open in IMG/M
3300026095\|Ga0207676_10488272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1168	Open in IMG/M
3300026095\|Ga0207676_10668568	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300026118\|Ga0207675_100297649	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300027831\|Ga0209797_10001854	All Organisms → cellular organisms → Bacteria	10650	Open in IMG/M
3300027886\|Ga0209486_10362691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	870	Open in IMG/M
3300027907\|Ga0207428_10929433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	613	Open in IMG/M
3300028380\|Ga0268265_12233699	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	554	Open in IMG/M
3300031562\|Ga0310886_10678678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	639	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.28%
Host-Associated	Host-Associated	48.72%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	48.72%
Terrestrial	Environmental → Terrestrial	41.03%
Aquatic	Environmental → Aquatic	10.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.95%
Freshwater	Environmental → Aquatic → Freshwater	6.84%
Sediment	Environmental → Aquatic → Sediment	3.42%
Roots	Host-Associated → Plants → Roots	3.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.53%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.13%
Ice	Environmental → Aquatic → Freshwater → Ice	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.42%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.56%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.42%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.13%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.42%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.56%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300012042	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_16332012	3300000033	Soil	EEVKTDGDFTHFVWVATADMAGLDKIGPAFAADRERRSEEERNTIAELFASVTEPDKARSMVTRTRIFRLPPAK*
INPhiseqgaiiFebDRAFT_1042459322	3300000364	Soil	GVVLAYGLSVEEVKTDGDFTHFVWMATANMSGLDKIAAAFAADRARRTTEEQSSIAEQFANVTEPDKARSVVTRSRIFRLSAPK*
JGI10214J12806_101723401	3300000891	Soil	EVKTEGDFTHMIWMAGADMGALDKIGPAFAADRERRSEEERNAIAELFANLTEPDKNRSVVTRSRIFRVAPAK*
JGI10214J12806_102443792	3300000891	Soil	VFDKLVADGVVLAYGLSAEDVKTDGDWTHFVWIATANMAAADKIGPAFAADRARRSEKDRNEITEAFLDATEPDKARSLITRSRIFKLAPQK*
JGI11615J12901_112001981	3300000953	Soil	EDVKTDGEFTHFVWIATANMAAADKIGPAFAADRARRTEAERNAITEAFGSVLEPDMARSIITRSRIFKVQGMK*
JGI10220J13317_115143691	3300001139	Soil	PVFEKLVADGVVLAYGLAAEEVKTDGDFTHFVWMATADMSGLDKIGAAFAADRARRTEDEQSSIAELFASVTEPDKARSVVTRSRIFRLPAAK*
JGI24737J22298_102506901	3300001990	Corn Rhizosphere	GDFTHFVWMATADMAGMDKIAAAFAADRARRSDEEQSAIAAQFASVTEPDKARSVVTRSRIFRLPAMK*
soilH2_100180021	3300003324	Sugarcane Root And Bulk Soil	DFTHFVWMATADMSGLDKIAAAFAADRARRTEDEQKSISDLFTSVTEPDKARSIVTRSRIFRQPAK*
Ga0062589_1028017331	3300004156	Soil	AVEEVKTEGDFTHMIWMAGADMGALDKIGPAFAADRERRSEEERNAIAELFANLTEPDKNRSVVTRSRIFRVAPAK*
Ga0062590_1021083521	3300004157	Soil	IFDKLVADGVVMAYGLAAEDVKTDGEFTHFVWIATANLAAADKIGPAFAADRARRTEAERNAITEAFGSVLEPDMARSIITRSRIFKVQGMK*
Ga0062380_100926491	3300004779	Wetland Sediment	LVADGVVLAYGLAAEEVKTDGDFTHFIWVATANMGAADKIAPTFNADRARRSEEERNAITELFLSLTEPDKARSVVTRSRMFRLPAQK*
Ga0062381_100736771	3300004808	Wetland Sediment	AAEEVKTDGDFTHFIWIATANMAAADKIAPAFNADRARRSEEERNAISDLFLSLTEPDKARSIVTRSRIFKVGKP*
Ga0070676_105095491	3300005328	Miscanthus Rhizosphere	AYGMSVEEVKTDGDFTHFIWIATPNMAAADKIGPAFAADRARRSEEERDAISNLFLSLTEADKARSIVTRSRIFRVPAPK*
Ga0068869_1000503181	3300005334	Miscanthus Rhizosphere	GMSVEEVKTDGDFTHFIWMATANMSGMEKINAAFTAERARHTEDEQKKVSELFNDALELDKSRSIVTRSRIFRLPPAK*
Ga0070691_107733492	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	HFIWMATANMSGMEKINAAFTAERARHTEDEQKKMSELFNDALELDKSRSIVTRSRIFRLPPAK*
Ga0070692_102684512	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	IADGSLLAYGLSTEEVKTDGDFTHFVWMAAANMSGLDKIRAAFAADRARRTADEQASITEEFTSVTEPDKARSVVTRSRIFRLPAAK*
Ga0070692_109900672	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	KLMADGVILAFGLSAEAIKTDGDFTHFVWMATANMAGLDKIAAAFAADRARRTQTEQTSITEAFTAVTEPDKARSVVTRSRIFRLPGAK*
Ga0070673_1013704762	3300005364	Switchgrass Rhizosphere	DGDFTHFVWMATADMSGMDKIGPAFTADRARRPQEEQDSIADQFASLTEPDKARSIVTRSRIFRLPSK*
Ga0070688_1011178351	3300005365	Switchgrass Rhizosphere	AEDVKTDGDWTHFVWIATANMAAADKIGPAFAADRARRSEKDRNEITEAFLDATEPDKARSLITRSRIFKLAPQK*
Ga0070700_1000356081	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	GDFTHFVWMAAANMSGLDKLGAAFAADRARRTNDEQASITEQFTSVTEPDKARSVVTRSRIFRLPAAK*
Ga0070700_1006213761	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MGAEEIKTDGEWTHFIWMATANLAGLDKIAAAFAADRARRTEDERNSINDAFTNVTEPDKARSIVTRSRIFRLPTGK*
Ga0070663_1014004051	3300005455	Corn Rhizosphere	VTDGVILAFGLATEAVKTDGDFTHFVWMATANMAGLDKIAAAFAADRARRTEDERNSITQAFTDVTEPDKARSIVTRSRIFRLPTAK*
Ga0068867_1015662292	3300005459	Miscanthus Rhizosphere	AAEDVKTDGDFTHFIWIATANMAGGDKVVAAFNADRARRTEAERNEIADAFNSVLEPDKSRSIITRSRIFKLREMK*
Ga0070707_1016963861	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VEEVKTDGDFTHFVWMATADMSGMEKIGPAFAADRARRSQEEQDTIADAFTSVTEPDKARSIVTRSRIFRLPTPK*
Ga0070698_1016023391	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	WMATANMAGLEKIGAAFNADRARRTEDERKTINGLFTDVTEPDKARSIVTRTRIFRLPASK*
Ga0070672_1020765211	3300005543	Miscanthus Rhizosphere	VKTDGDFTHFVWMATANMSGLDKIAAAFGADRARRTEAERKEITEAFTNVTDPDMSRSMVTRSRIFKLAPPK*
Ga0070686_1001209002	3300005544	Switchgrass Rhizosphere	PVFDKLLADGVVLAYGLAAEEVKTDGDFTHFVWMATANMSGLDKIAAAFAADRARRTEAERSQITEAFTSVTDPDMSRSMVTRSRIFKLAPPK*
Ga0070693_1014407992	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	KLVSDGILLAYGLAVEEVKTDGDFTHYVWIATANLAGMDKVAAAFTADRARRSEEERAAIGDLFASLTEPDMARSLVTRSRIFKIGAPPKVSSN*
Ga0070704_1022777671	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KLVTDGVVLAYGMSVEEVKTDGDFTHFIWMATANMSGMEKINAAFTAERARHTEDEQKKVSELFNDALELDKSRSIVTRSRIFRLPPAK*
Ga0068857_1003861841	3300005577	Corn Rhizosphere	VKTDGDFTHFVWMAAANMSGMDKIGAAFAADRARRTANEQASITEQFTNVTEPDKARSVVTRSRIFRLPATK*
Ga0068857_1019361652	3300005577	Corn Rhizosphere	KTDGEFTHFVWIATANMAAADKIGPAFAADRARRTEAERNAITEAFGSVLEPDMARSIVTRSRIFKVQGMK*
Ga0068859_1015123542	3300005617	Switchgrass Rhizosphere	VWMAAANMSGMDKIAAAFAADRAHRTDAEQASITEQFTSVTEPDKARSVVTRSRIFRLPAAK*
Ga0068861_1008145832	3300005719	Switchgrass Rhizosphere	VKTDGDWTHFVWIATANMAAADKIGPAFAADRARRSEKDRNEITEAFLDATEPDKARSLITRSRIFKLAPQK*
Ga0068870_102740082	3300005840	Miscanthus Rhizosphere	VVLAYGMSVEEVKTDGDFTHFIWMATANMSGMEKINAAFTAERARHTEDEQKKVSELFNDALELDKSRSIVTRSRIFRLPPAK*
Ga0068870_104940071	3300005840	Miscanthus Rhizosphere	EKLMADGVLLAYGLSTEEVKTDGDFTHFVWMATADMSGMDKIGPAFAADRARHSQEEQDAIAEQFASLTEPDKARSVVTRSRIFKIPAK*
Ga0068858_1019807031	3300005842	Switchgrass Rhizosphere	LAYGLSVEEVKTDGDFTHFVWMAGANMSAMDKIAAAFAADRARRTADEQAAITEQFTSVTEPDKARSVVTRSRIFRLPAAK*
Ga0075428_1025304221	3300006844	Populus Rhizosphere	MASVYDKLVTDGVVMAYGLAVEEVKTDGDFTHFVWVAAANLAAFDKIGPAFVADRGRRSEEERNAISDLFTSLTDPDMARSIVTRSRIFKVATPKVSSN*
Ga0075421_1010505042	3300006845	Populus Rhizosphere	VADGVVLAYGLAVEEVKTDGDFTHFIWVATADMAGFDKVGPAFAADRARRSEEERNSIMELFGSVTEPDKARSIVTRSRIFRIPPAK*
Ga0079217_101727872	3300006876	Agricultural Soil	RTWEKYNKPIFDKLVTDGVILAFGLATESLKTDGDFTHFVWLATANMAGLDKIGAAVAADRARRTEDERNSILQAFGDATEPDKARSIVTRSRIFRMAAK*
Ga0075424_1011002822	3300006904	Populus Rhizosphere	TDGDFTHFVWMAAANMSGMDKIAAAFAADRARRTADEQAAITEQFTSVTEPDKARSVVTRSRIFRLPPAK*
Ga0075424_1028328501	3300006904	Populus Rhizosphere	VLAYGLAVEEIKTDGDFTHFVWVAVPNMAAADKVSAAFNADRARRSEEERTAIGDLFLSVTEPDMARSIVTRSRIFRLAPMK*
Ga0079216_102369563	3300006918	Agricultural Soil	VLAYGLAAEEVKTDGDFTHFVWIATANMADADKIGPAFTADRARRSEKERNEITEAFLESTEPDKARSIVTRSRIFKLGPQK*
Ga0075419_101682311	3300006969	Populus Rhizosphere	MASVYDKLVTDGVVMAYGLAVEEVKTDGDFTHFVWVAAANLAAFDKIGPAFVADRGRRSEEERNAISDLFTSLTEPDMARSIVTRSRIFKVATPKVSSN*
Ga0105245_119494011	3300009098	Miscanthus Rhizosphere	YGLAAEDVKTDGEFTHFVWIATANLAAADKIGPAFAADRARRTEAERNAITEAFGSVLEPDMARSIITRSRIFKVQGMK*
Ga0105243_111674201	3300009148	Miscanthus Rhizosphere	KGADYRRTWEKYNKPTFDKLLADGVILAYGLANEAIKTDGEWTNYVWMATANMAGLDKIAAAFAADRAARTEDERNSITQAFTDATEPDKARSIVTRSRIFRLPAAK*
Ga0105243_117020161	3300009148	Miscanthus Rhizosphere	MSVEEVKTDGDFTHFIWMATANMSGMEKINAAFTAERARHTEDEQKKVSELFNDALELDKSRSIVTRSRIFRLPPAK*
Ga0105243_119142543	3300009148	Miscanthus Rhizosphere	DGDFTHFVWMATASMAGMEKIGAAFAADRARRTADERKAINDLFTDVTEPDKARSIVTRSRIFRLPASK*
Ga0105243_128006621	3300009148	Miscanthus Rhizosphere	DGDFTHFVWMATADMAGLDKIRAAFAADRARRTDDEQKTIADLFASVTEPDKARSIVTRSRIFRLPAK*
Ga0075423_121434941	3300009162	Populus Rhizosphere	YRRAWEKYNKPVYDKLITDGVVLAYGLAVEEIKTDGDFTHFVWVAVPNMAAADKVSAAFNADRARRSEEERTAIGDLFLSVTEPDMARSIVTRSRIFRLAPMK*
Ga0105241_111209712	3300009174	Corn Rhizosphere	DGILLAYGLAVEEVKTDGDFTHYVWIATANLAGMDKVAAAFTADRARRSEEERAAIGDLFASLTEPDMARSLVTRSRIFKIGAPPKVSSN*
Ga0105241_125928351	3300009174	Corn Rhizosphere	TDGEFTHFVWIGTANMAAGDKIGPAFAADRARHSEEERNAITEAFSSVLEPDMARSIITRSRIFKVQGMK*
Ga0105248_106754581	3300009177	Switchgrass Rhizosphere	EVKTDGDFTHFVWMATANMSGLDKIAAAFAADRARRTEAERSQITEAFTSVTDPDMSRSMVTRSRIFKLAPPK*
Ga0105249_114329141	3300009553	Switchgrass Rhizosphere	VFDKLVADGVVLAYGLAAEDVKTDGEFTHFVWIATANMAAADKIGPAFAADRARRTEAERNAITEAFGSVLEPDMARSIITRSRIFKVQGMK*
Ga0126304_106060762	3300010037	Serpentine Soil	DGDFTHFVWMAAADMSGMDKISAAFAADRARLTDAERASIAELFTSVTEPDKARSVVTRSRIFRLPPSK*
Ga0126310_112573731	3300010044	Serpentine Soil	ADGTLLAYGLSTEEVKTDGDFTHFVWMAVADMSGMDKIAAAFAADRARRTDEEQSSMSELFANVTEPDKARSVVTRSRIFRLPPPK*
Ga0105239_113872691	3300010375	Corn Rhizosphere	KLVSDGVILAYGMSVEEVKTDGDFTHFVWMATANLAGLEKIGAAFNADRARRTEDERKTINDLFTDVTEPDKARSIVTRTRIFKLPATK*
Ga0134124_119782011	3300010397	Terrestrial Soil	DGALLAYGLSVEEVKTDGDFTHFVWMATSDMAGLDKIAAAFAADRARRTEDEQKQIADLFASVTEPDKARSIVTRSRIFRLPAK*
Ga0134124_124707512	3300010397	Terrestrial Soil	DFTHFVWMATASMAGMEKIGAAFAADRARRTADERKAINDLFTDVTEPDKARSIVTRSRIFRLPASK*
Ga0134127_109212661	3300010399	Terrestrial Soil	LSTEEVKTDGDFTHFVWMATADMSGMDKIGPAFAADRARRSQEEQDSIAEQFASLTEPDKARSIVTRSRIFRLPAK*
Ga0134122_104986103	3300010400	Terrestrial Soil	DFTHFIWMATANMAGLEKIGAAFNADRARRTEDERKTINGLFTDVTEPDKARSIVTRTRIFRLPASK*
Ga0134121_127779831	3300010401	Terrestrial Soil	GMSVEEVKTDGDFTHFVWMATANMAGLEKIGAAFAADRQRRTEDERKAINDLFTDVTEPDKARSIVTRSRIFRLPASK*
Ga0134123_107270031	3300010403	Terrestrial Soil	EVKTDGDFTNFIWIACANMAALEKVGPAFTADRNKRSEEERTAIAELFATLTEPDKNRSVVARSRIFKVQEEK*
Ga0137443_12740302	3300011433	Soil	FDKLVADRVVLAYGLAQEEVKTDSEWTHFVWIATANMADADKIGPAFAADRARRSEKDRNQITEDFLDATEPDKARSIVTRSRIFKVAP*
Ga0136627_10411341	3300012042	Polar Desert Sand	FGLATEEVKTDGEFTHFIWFATANMAGLDKVGPAFDADRARRSEKDRETINELFLSVTEPDKARSMVTRSRIFKLAPQK*
Ga0136631_100815771	3300012043	Polar Desert Sand	THFVWVATANMGAADKIGPTFTADRNRRSEEERNAIAETFASLTEPDKARSLVTRARIFRIPGK*
Ga0136632_100219211	3300012093	Polar Desert Sand	NKPVYDKLIADGVVLAYGLAVEEVKTEGDFTHFVWVATANMGAADKIGPTFTADRNRRSEEERNAIAETFASLTEPDKARSMVTRARIFRMPGK*
Ga0157216_101870581	3300012668	Glacier Forefield Soil	KGADYRQAWEKNNKPVYDKLVADRVVLAYGLAQEEVKTDGEWTHFVWIATATMADADKIGPAFAADRARRSEKDRNEITKDFLEATEPDKARSMVTRSRIFKMAP*
Ga0136614_104094031	3300012684	Polar Desert Sand	KLLADGVVLAYGLAVEEVKTDGDFTHFVWVATANMGAADKIGPTFTADRNRRSEEERNAIAETFASLTEPDKARSLVTRARIFRIPGK*
Ga0137396_107646412	3300012918	Vadose Zone Soil	VLAYGLAAEEIKTDGDFTHFVWIATPNMAAADKIGPAFAADRARRSEDERNAITEALLNATEPDKARSIVTRARIFKVAPQK*
Ga0164302_102600502	3300012961	Soil	VTDGVILAYGMSVEEVKTDGDFTHFIWMATANMAGLEKIGAAFNADRARRTEDERKTINDLFTDVTEPDKARSIVTRTRIFRLPASK*
Ga0164304_100925021	3300012986	Soil	VLAYGLAAEDVKTDGDFTHFIWIATANMAGGDKVAAAFTADRARRTEEERNAIADAFNSVLEPDMSRSIITRSRIFKVQGMK*
Ga0157373_111321401	3300013100	Corn Rhizosphere	LAYGLAAEEVKTDGDFTHFVWMATANMSGLDKIAAAFGADRARRTEAERKEITEAFTNVTDPDMSRSMVTRSRIFKLAPPK*
Ga0157378_102173342	3300013297	Miscanthus Rhizosphere	VLAYGLAAEEVKTDGDFTHFVWMATANMSGLDKIAAAFGADRARRTEAERKEITEAFTNVTDPDMSRSMVTRSRIFKLAPPK*
Ga0157378_119139692	3300013297	Miscanthus Rhizosphere	GDFTHFIWMATANMSGLEKIGAAFAADRERRTADERKAINDLFADVTELDKARSIVTRSRIFKLPASK*
Ga0157378_123357111	3300013297	Miscanthus Rhizosphere	ADGSLLAYGLSVEEVKTDGDFTHFVWMAAASMSGMDKVGAAYAADRARRTADEQASIAEQFASVTEPDKARSVVTRSRIFRLPAAK*
Ga0157375_136182051	3300013308	Miscanthus Rhizosphere	GLAAEEVKTDGDFTHFVWMATANMSGLDKIAAAFAADRARRTEAERSQITEAFTSVTDPDMSRSMVTRSRIFKLAPPK*
Ga0163163_104616941	3300014325	Switchgrass Rhizosphere	PVFDKLIADGVLLAYGLSVEEVKTDGDFTHFVWMATADMSGMDKIGPAFTADRARRPQEEQDSIADQFASLTEPDKARSIVTRSRIFRLPAK*
Ga0163163_108094581	3300014325	Switchgrass Rhizosphere	KLVADGVVLAYGLAAEDVKTDGEFTHFVWIATASMAAADKIGPAFTADRARRTEAERNAITEAFGSVLEPDMARSIITRSRIFKVQGMK*
Ga0163163_116524301	3300014325	Switchgrass Rhizosphere	PVFDKLIADGVLLAYGLSVEEVKTDGDFTHFVWMATADMSGMDKIGPAFTADRAHRPQEEQDSIADQFASLTEPDKARSIVTRSGIFRLPLK*
Ga0163163_131078071	3300014325	Switchgrass Rhizosphere	LSVEEVKTDGDFTHFVWMAGANMSAMDNINAAFAADRARRTADEQAAITEQFTSVTEPDKARSVVTRSRIFRLPPAK*
Ga0157380_111825492	3300014326	Switchgrass Rhizosphere	VYDKLVADRVVLAYGLAQEEVKTDGEWTHFVWVATASMADADKIGSAFTADRARRSEKDRNEINQDFLDATEPDKARSIVTRSRIFKLAPQK*
Ga0180066_10511672	3300014873	Soil	ADRVVLAYGLAQEEVKTDGEFTHFVWIGTASMADADKIGPAFAADRARRSEKDRKEITQDFLDATEPDKARSMVTRSRIFKLAPQK*
Ga0157379_126192011	3300014968	Switchgrass Rhizosphere	KTDGDFTHFVWMATANLAGLEKIGAAFNADRARRTEDERKTINDLFTDVTEPDKARSIVTRTRIFKLPATK*
Ga0157376_110070011	3300014969	Miscanthus Rhizosphere	VVLAYGLAVEEVKTEGDFTHFVWMATANMAGLDKIAAAFQADRDRRTEDERKTITELFTSVTEPDKARALVTRSRIFRLPAPK*
Ga0173478_107205151	3300015201	Soil	YGLSAEDVKTDGDWTHFVWIATANMAAADKIGPAFAADRARRSEKDRNEITEAFLDATEPDKARSIITRSRIFKISPK*
Ga0180075_10667461	3300015252	Soil	GEFTHFVWVGTANMAAADKIGPVFAADRARRSEEERTAIGDLFLSLTEPDKARSIVTRSRIFRLPPQK*
Ga0132258_107389491	3300015371	Arabidopsis Rhizosphere	EVKTDGDFTHFIWMATANMAGLEKIGAAFNADRARRTEDERKTINDLFTDVTEPDKARSIVTRTRIFKLPASK*
Ga0132258_111928411	3300015371	Arabidopsis Rhizosphere	IKTDGDFTHFVWMATANMAGLDKIAAAFAADRARRTQAEQDAITQAFTDVTEPDKARSMVTRSRIFRLPAAK*
Ga0132257_1039615491	3300015373	Arabidopsis Rhizosphere	VKTDGEFTHFVWIATANMAAADKIGPAFAADRARRTEAERNAITEAFGSVLEPDMARSIITRSRIFKVQGMK*
Ga0132257_1045364231	3300015373	Arabidopsis Rhizosphere	KTDGDFTHFIWMATANMSGMEKINAAFTAERARHTEDEQKKVSELFNDALELDKSRSIVTRSRIFRLPPAK*
Ga0136617_100373981	3300017789	Polar Desert Sand	VLITEGLGKNTTNRFTTKLLADGVVLAYGLAVEEVKTDGDFTHFVWVATANMGAADKIGPTFTADRNRRSEEERNAIAETFASLTEPDKARSLVTRARIFRIPGK
Ga0184619_101703211	3300018061	Groundwater Sediment	KTDGDFTHFVWIATANMADADKIGPAFAADRARRSEKDRNEITQDFLEATEPDKARSIVTRSRIFKLAAPK
Ga0190265_123123131	3300018422	Soil	VKTDGEWTHFIWIANMAALEKIGPAFTADRARRSEEERAAIAELFGSLTEADKARSIVTRSRIFRMPAAK
Ga0190268_101790981	3300018466	Soil	EEVKTDGNFTHFDWIATATMADADKIGPVFAADRARRSEKDRNEITEAFQDATEPDKARSMVTRSRIFKVASPK
Ga0190270_121539111	3300018469	Soil	VKTDGDWTHFVWVATANMADADKIGPAFAADRARRSEKDRNEITQDFLEATEPDKARSLVTRSRIFKIAAPK
Ga0190270_126081332	3300018469	Soil	VFDKLVADRVVLAYGLSQEEVKTDGEWTHFVWIATASMADADKIGPAFTADRQRRSENDRKEMTKDFLDATEPDKARSMVTRARIFKIAP
Ga0190264_116712731	3300019377	Soil	KLVADRVVLAYGLAQEEVKTDGEWTHFVWIATASMADADKIGPAFAADRARRSEKDRNEITEDFLNATEPDKARSLVTRARMFKVAP
Ga0190267_109803242	3300019767	Soil	FTRFVWIATATMADADKVGAAFAADRARRSEKDRNEITEEFLNATEPDKARSIVTRARIFKVAP
Ga0193744_10915761	3300019874	Soil	DGVVLAYGFSVEDIKTDGNFTHFIWFATANMAALDKVGPAFTADRARRSEEERNAINEAFLEVQEPDMARSIVTRSRVFKVAGMK
Ga0182009_102201511	3300021445	Soil	DGDFTHFVWMATANMAGLDKIAAAFAADRARRSADEQNSITQAFTDITEPDQARSIVTRSRIFRLPAAK
Ga0209431_111674171	3300025313	Soil	YGLSVEEVKTDGEFTHFIWVGTANMAIADKIGPAFAADRARRSEEERAAIAARFGDLLETDKSRSMLTRSLIFKVAPQK
Ga0207654_112999002	3300025911	Corn Rhizosphere	AYGLAVEDVKTDGEFTHFVWIATANMAAGDKVGPAFAADRARRSEDERNAITEAFSSALEPDMARSIITRCRVFKVQGIK
Ga0207646_114174521	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PVFEKLVADGVLLAYGLSIEEVKTDGDFTHFVWMATADMSGLDKISAAFAADRARRSQEEQDSIGEQFGSLTEPDKARAIVTRSRIFRLPTPK
Ga0207701_108493301	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VWMAAANMAGLDKVATAFNADRARRPEAERGAINEAFTGVTEPDKARSIVTKSRIFRLPAAK
Ga0207690_117748791	3300025932	Corn Rhizosphere	YNKPIFDKLVTDGVILAFGLATEAVKTDGDFTHFVWMATANMAGLDKIAAAFAADRARRTEDERNSITQAFTDVTEPDEARSIVTRSRIFRLPAAK
Ga0207689_110912641	3300025942	Miscanthus Rhizosphere	VTDGVVLAYGMSVEEVKTDGDFTHFIWMATANMSGMEKINAAFTAERARHTEDEQKKVSELFNDALELDKSRSIVTRSRIFRLPPAK
Ga0207658_120081311	3300025986	Switchgrass Rhizosphere	VFDKLVTDGVVLAYGMSVEEVKTDGDFTHFIWMATANMSGMDKIAAAFAADRARHTEDEQKKVSELFNDALELDKSRSIVTRSRIFRLPPAK
Ga0207703_113066391	3300026035	Switchgrass Rhizosphere	VFDKLIADGALLAYGLSVEEVKTDGDFTHFVWMATADMAGLDKIRAAFAADRTRRTEDEQKTIADLFASVTEPDKARSIVTRSRIFRLPAK
Ga0207641_101986533	3300026088	Switchgrass Rhizosphere	LSVEEVKTDGDFTHFVWMATADMAGMDKIRAAFAADRTRRTAEEQKSIAELFASVTEPDKARSIVTRSRIFRLPAK
Ga0207676_104882722	3300026095	Switchgrass Rhizosphere	LSVEEVKTDGDFTHFVWMATADMAGMDKIRAAFAADRTRRTGDEQKTIADLFASVTEPDKARSIVTRSRIFRLPAK
Ga0207676_106685683	3300026095	Switchgrass Rhizosphere	VFEKLMADGVLLAYGLSTEEVKTDGDFTHFVWMATADMSGMDKIGPAFAADRARRPQEEQDAIAEQFTSLTEPDKARSIVTRSRIFRLPAK
Ga0207675_1002976492	3300026118	Switchgrass Rhizosphere	EEVKTDGDFTHFVWMATANMSGLDKIAAAFAADRARRTEAERSQITEAFTSVTDPDMSRSMVTRSRIFKLAPPK
Ga0209797_1000185415	3300027831	Wetland Sediment	LVADGVVLAYGLAAEEVKTDGDFTHFIWVATANMGAADKIAPTFNADRARRSEEERNAITELFLSLTEPDKARSVVTRSRMFRLPAQK
Ga0209486_103626912	3300027886	Agricultural Soil	AAEEVKTDGDWTHFVWIATATMADADKIGPAFAADRARRSEKDRNEITQDFLDATEPDKARSMVTRSRIFKIAPEN
Ga0207428_109294331	3300027907	Populus Rhizosphere	VVLAFGLAAEEVRTDGDFTHFVWMATANMSGLDKIAAAFGADRARRTEAERKEITEAFTNVTDPDMSRSMVTRSRIFKLAPPK
Ga0268265_122336991	3300028380	Switchgrass Rhizosphere	EYRATWEKYNKPVLDQLVKDGALLAYGMSVEEVRTDGDFTHFVWMAAANMAGLDKVATAFNADRARRPEAERGAINEAFTGVTEPDKARSIVTKSRIFRLPAAK
Ga0310886_106786781	3300031562	Soil	VFDKLLADGVVLAFGLAAEEVKTDGDFTHFVWMATANMSGLDKIAAAFGADRARRTEAERKEITEAFTNVTDPDMSRSMVTRSRIFKLAPPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076989

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences