Metagenome / Metatranscriptome Family F076987

Basic Information
Family ID	F076987
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	62 residues
Representative Sequence	MKKTMMMAAVLVLVGCGPKKEAAPAADTAAMAPAATDTGMGMSHDSMPMSSDSTMARDTTKK
Number of Associated Samples	102
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.96 %
% of genes near scaffold ends (potentially truncated)	24.79 %
% of genes from short scaffolds (< 2000 bps)	89.74 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Most Common Taxonomy
Group	Bacteria (78.632 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.658 % of family members)
Environment Ontology (ENVO)	Unclassified (26.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.043 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.56% β-sheet: 0.00% Coil/Unstructured: 84.44%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF08669	GCV_T_C	37.61
PF13419	HAD_2	3.42
PF13189	Cytidylate_kin2	0.85
PF01571	GCV_T	0.85
PF13627	LPAM_2	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.63 %
Unclassified	root	N/A	21.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.63 %
Unclassified	root	N/A	21.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.63 %
Unclassified	root	N/A	21.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.37 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	11.11 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.71 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.37 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	11.11 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.71 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.37 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	10.26 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.71 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.37 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	10.26 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.71 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.37 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	10.26 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.37 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.37 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	1.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.37 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0693427	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300000956\|JGI10216J12902_109497602	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300003267\|soilL1_10171659	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300003996\|Ga0055467_10031683	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300004643\|Ga0062591_102746105	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300004780\|Ga0062378_10040319	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005174\|Ga0066680_10283635	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300005178\|Ga0066688_10593164	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005331\|Ga0070670_101407696	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	639	Open in IMG/M
3300005332\|Ga0066388_103633111	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300005434\|Ga0070709_10442611	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300005439\|Ga0070711_100283409	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300005445\|Ga0070708_100609932	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005467\|Ga0070706_100489280	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300005467\|Ga0070706_100771966	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300005467\|Ga0070706_100919306	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300005518\|Ga0070699_100466062	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300005536\|Ga0070697_100770482	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005536\|Ga0070697_101355599	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005540\|Ga0066697_10376107	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005546\|Ga0070696_102017020	Not Available	501	Open in IMG/M
3300005547\|Ga0070693_100039557	All Organisms → cellular organisms → Bacteria	2642	Open in IMG/M
3300005547\|Ga0070693_100582524	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005562\|Ga0058697_10249601	Not Available	826	Open in IMG/M
3300005834\|Ga0068851_10191838	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300005841\|Ga0068863_100616235	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1075	Open in IMG/M
3300005874\|Ga0075288_1085586	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005883\|Ga0075299_1013600	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005888\|Ga0075289_1021333	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005904\|Ga0075280_10040901	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300006028\|Ga0070717_11359025	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300006845\|Ga0075421_100141426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	3011	Open in IMG/M
3300006847\|Ga0075431_102125179	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006853\|Ga0075420_101252152	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300009012\|Ga0066710_101081930	Not Available	1240	Open in IMG/M
3300009090\|Ga0099827_10237867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1526	Open in IMG/M
3300009137\|Ga0066709_101415806	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300009162\|Ga0075423_12287808	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009840\|Ga0126313_10811654	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300010039\|Ga0126309_10450672	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300010039\|Ga0126309_10891114	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010039\|Ga0126309_11021906	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300010039\|Ga0126309_11256202	Not Available	511	Open in IMG/M
3300010040\|Ga0126308_10536452	Not Available	793	Open in IMG/M
3300010041\|Ga0126312_10768655	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300010044\|Ga0126310_11438473	Not Available	563	Open in IMG/M
3300010045\|Ga0126311_11131398	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300010373\|Ga0134128_12776950	Not Available	540	Open in IMG/M
3300010396\|Ga0134126_11836344	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	664	Open in IMG/M
3300012200\|Ga0137382_11056004	Not Available	581	Open in IMG/M
3300012201\|Ga0137365_10301027	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300012204\|Ga0137374_10421384	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1055	Open in IMG/M
3300012204\|Ga0137374_11220349	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012212\|Ga0150985_111457314	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300012212\|Ga0150985_115589062	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012212\|Ga0150985_120376890	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012355\|Ga0137369_10325220	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1131	Open in IMG/M
3300012355\|Ga0137369_10608205	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300012358\|Ga0137368_10315721	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300012530\|Ga0136635_10131118	Not Available	818	Open in IMG/M
3300012532\|Ga0137373_10846566	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300012930\|Ga0137407_10162204	Not Available	1984	Open in IMG/M
3300012931\|Ga0153915_10430574	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1498	Open in IMG/M
3300012951\|Ga0164300_10081700	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300012955\|Ga0164298_10509125	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300012955\|Ga0164298_10698013	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300012957\|Ga0164303_10415178	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300012961\|Ga0164302_11341856	Not Available	580	Open in IMG/M
3300012985\|Ga0164308_10436999	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300012986\|Ga0164304_11112045	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300014314\|Ga0075316_1114568	Not Available	653	Open in IMG/M
3300015371\|Ga0132258_11255950	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300018027\|Ga0184605_10149597	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300018059\|Ga0184615_10090480	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1719	Open in IMG/M
3300018429\|Ga0190272_11243497	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300018433\|Ga0066667_11508511	Not Available	594	Open in IMG/M
3300018476\|Ga0190274_11431773	Not Available	781	Open in IMG/M
3300019255\|Ga0184643_1264281	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300019377\|Ga0190264_10087281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1414	Open in IMG/M
3300021951\|Ga0222624_1545777	Not Available	677	Open in IMG/M
3300025324\|Ga0209640_11003823	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	642	Open in IMG/M
3300025326\|Ga0209342_10054128	All Organisms → cellular organisms → Bacteria	3791	Open in IMG/M
3300025552\|Ga0210142_1001657	All Organisms → cellular organisms → Bacteria	4409	Open in IMG/M
3300025558\|Ga0210139_1027936	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1105	Open in IMG/M
3300025559\|Ga0210087_1075008	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300025910\|Ga0207684_10900361	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300026331\|Ga0209267_1213948	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300027716\|Ga0209682_10003824	All Organisms → cellular organisms → Bacteria	4177	Open in IMG/M
3300027765\|Ga0209073_10092146	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300027840\|Ga0209683_10344405	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300027909\|Ga0209382_10152694	All Organisms → cellular organisms → Bacteria	2674	Open in IMG/M
3300028705\|Ga0307276_10143938	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300028715\|Ga0307313_10200443	Not Available	619	Open in IMG/M
3300028799\|Ga0307284_10249430	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300028812\|Ga0247825_10532673	Not Available	838	Open in IMG/M
3300028824\|Ga0307310_10189083	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300028878\|Ga0307278_10100638	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300030336\|Ga0247826_11417067	Not Available	562	Open in IMG/M
3300031421\|Ga0308194_10176381	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300031548\|Ga0307408_100982762	Not Available	777	Open in IMG/M
3300031716\|Ga0310813_10032198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3715	Open in IMG/M
3300031716\|Ga0310813_11795359	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031731\|Ga0307405_10068398	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300031731\|Ga0307405_10765300	Not Available	806	Open in IMG/M
3300031824\|Ga0307413_10264542	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300031852\|Ga0307410_11641692	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300031938\|Ga0308175_100229950	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1847	Open in IMG/M
3300031995\|Ga0307409_100201563	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1781	Open in IMG/M
3300032005\|Ga0307411_10133868	Not Available	1816	Open in IMG/M
3300032074\|Ga0308173_10909771	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300033412\|Ga0310810_10930722	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300033513\|Ga0316628_100500243	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1568	Open in IMG/M
3300034820\|Ga0373959_0161439	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.05%
Host-Associated	Host-Associated	17.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.94%
Plants	Host-Associated → Plants	17.95%
Aquatic	Environmental → Aquatic	11.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.97%
Freshwater	Environmental → Aquatic → Freshwater	5.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.13%
Marine	Environmental → Aquatic → Marine	3.42%
Sediment	Environmental → Aquatic → Sediment	1.71%
Phylloplane	Host-Associated → Plants → Phylloplane	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.28%
Loam	Environmental → Terrestrial → Soil → Loam	14.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.42%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.71%
Ice	Environmental → Aquatic → Freshwater → Ice	0.85%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.55%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.27%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.42%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.42%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.56%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.71%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.85%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005883	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005904	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_06934272	3300000033	Soil	MKKTMMMAAVLVLVGCGPKKEAAPAADTAAMAPAATDTGMGMSHDSMPMSSDSTMARDTTKK*
JGI10216J12902_1094976022	3300000956	Soil	MKKTLMMAAVLVLAGCGPKKEAAPAADTAAMAPAATDTGMGMSHDSMPTSSDTTMARDTTKK*
soilL1_101716592	3300003267	Sugarcane Root And Bulk Soil	MKKTLMMAAALVMLAACGDNRANTPAADTAGMAPAMSDTGMGMSHDSAAMSSDSTMARDTAR*
Ga0055467_100316832	3300003996	Natural And Restored Wetlands	FVLAGCGERKAETPAADTAGMAPAMSDTGMGMSHDSAAMSSDSTMARDTMSK*
Ga0062591_1027461052	3300004643	Soil	MKKTLMMAAVLVLVGCGPKKEAAPAADTAAMAPAATDTGMSNMSHDSMPMSSDSTMARDTTKK*
Ga0062378_100403192	3300004780	Wetland Sediment	MKKTLMIAAMLVLVGCGEKKAEAPAADTAAMAPMSTDTGMAGMAHDSMSMSDSMMARDTTRK*
Ga0066680_102836352	3300005174	Soil	MKKTLMMAAVLVLAGCGPKKAQAPAADTAAMAPATADTGMGGGGMAHDSMAKSDSTMARDTTKAKK*
Ga0066688_105931641	3300005178	Soil	MKKTLMMAAVLVLAGCGPKKAEAPAADTAAMAPATADTGMGGGGMAHDSMAKSDSTMARDTTKAKK*
Ga0070670_1014076961	3300005331	Switchgrass Rhizosphere	MKKTMMMAAMLVLVGCGPKKETAPAADTAAMAPAAADTGMGMSHDSMPMSSDSTMARDTTKK*
Ga0066388_1036331112	3300005332	Tropical Forest Soil	MKKTLMMAAVLVLVGCGPKKEAAPAADTAAMAPAATDTGMSSMSHDSMPMSSDSTMARDTTKK*
Ga0070709_104426112	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLLMAGMIVLAGCGEKKAAMPAADTAAMAPAATPADTGMGGMSHDQTSSDSTMARDTAKAKK*
Ga0070711_1002834092	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTMMMAALLVMVGCGPKKEAAPAADTAAMAPAATDTGMGGMSHDSMPMSSDSTMARDTAKK*
Ga0070708_1006099321	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KIMMMAAVLVLAGCGPKKEAAPAADTAAMAPAASDTGMGSMSHDSMPMSSDSTMARDTAKK*
Ga0070706_1004892801	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTLLMAAVIELAGCGEKKAEAPAADTAAMAPAATPADTGMGMSHEMSDSTMARDTTKK
Ga0070706_1007719661	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AVLVLVGCGEKKAAAPAADTAAMAPAAADTGMGGMSHDSMPMSSDSTMARDTAKK*
Ga0070706_1009193062	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKKILLMAAVLVVAGCGPKKSEAPAADTAAMAPATADTGMGGMSHDSMAKSDSTMARDTSKAKK*
Ga0070699_1004660621	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKKILLMAAVLVLAGCGPKKSEAPAADTAAMAPATADTGMGGMSHDSMAKSDSTMARDTSKAKK*
Ga0070697_1007704821	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKKILMMAAVLVLAGCGPKKSEAPAADTAAMAPATADTGMGGMSHDSMAKSDSTMARDTSKAKK*
Ga0070697_1013555992	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTMLMAAVLVLVGCGEKKGETMPASDTAAMAPAAADTGMGMGGMSHDSMPMSSDSTMARDTAKK*
Ga0066697_103761071	3300005540	Soil	MKKTLMMAAVLVLAGCGPKKSEAPAADTAAMAPATADTGMGGGGMTHDSMAKSDSTMARDTTKAKK*
Ga0070696_1020170202	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTMLMAAVLVLVGCGEKKGETMPASDSAAMAPAAADTGMGMGGMSHDSMPMSD
Ga0070693_1000395573	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTMLMAAVLVLVGCGEKKGETMPASDTAAMAPAAADTGMGMGGMSHDSMPMSDSTMARDTTKK*
Ga0070693_1005825241	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTMMMAAVLVLVGCGPKKEAAPAADTAAMAPAATDTGMSMSHDSMPMSSDSTMARDTTKK*
Ga0058697_102496011	3300005562	Agave	MKKIMMVAAVLAMAGCGPKKSEAPPADTAGMAPAATDTGMGGMSHDTMPMSSDSTMARDTTKK*
Ga0068851_101918382	3300005834	Corn Rhizosphere	MKKTMMMAAVLVLVGCGPKKEAVPDADTAAMAPAAADTGMGGMSHDSMPMSSDSTMARDTTKK*
Ga0068863_1006162352	3300005841	Switchgrass Rhizosphere	MKKTMMMAAMLVLVGCGPKKETAPAADTAAMAPAAADTGMGMSHDSMPMSSDSTMA
Ga0075288_10855862	3300005874	Rice Paddy Soil	TLMMAALLVVLAGCGEKRAATPAADTAGMAPAMSDTGMGMSHDTAMMSSDSTMARDTTSK
Ga0075299_10136002	3300005883	Rice Paddy Soil	MTKTLMMAALLVVLAGCGEKRAATPAADTAGMAPAMSDTGMGMSHDTAMMSSDSTMARDTTSK*
Ga0075289_10213331	3300005888	Rice Paddy Soil	MKKTMMMAAVLFVLAACGEKNAGGAATDTAGMAPAMSDTGMGMSHDTSMMSSDSTMARDTMSR*
Ga0075280_100409012	3300005904	Rice Paddy Soil	MKKTMMMAAVLFVLAGCGERKAETPAADTAGMAPAMSDTGMGMSHDSAAMSSDSTMARDTMSK*
Ga0070717_113590251	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GAKMKKTMMMAALLVMVGCGPKKEAAPAADTAAMAPAATDTGMGGMSHDSMPMSSDSTMARDTAKK*
Ga0075421_1001414262	3300006845	Populus Rhizosphere	MKKTMMLAAALVLVGCGEKKGETPAADTAAMAPAATPTDTGMGMGGMSHDSMSSDSTMARDTTKK*
Ga0075431_1021251792	3300006847	Populus Rhizosphere	MKKTLMMAVVLVLAGCGEKKGEAPAADTAAMAPATADTGMGGMSHDSMSMSDSTMARDTTKK*
Ga0075420_1012521522	3300006853	Populus Rhizosphere	MKKTMMLAAALVLVGCGEKKADMPAADTAAMAPAATPADTGMGMGGMSHDSMSSDSTMARDTTKK*
Ga0066710_1010819302	3300009012	Grasslands Soil	MKRTLLMAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGGMSHDSAAPMSDSTMARDTTKAKK
Ga0099827_102378672	3300009090	Vadose Zone Soil	MKKTLLMAAALVVLAGCGGKKPAGAATDTAGMAMPADTGMAGMSHDSAAPMSDSTMARDTTKPKK*
Ga0066709_1014158062	3300009137	Grasslands Soil	MKKTLLMAAALVVLAGCGEKKAAGGATDTAGMDTPADTGMAGMSHDSAAPMSDSTMA
Ga0075423_122878081	3300009162	Populus Rhizosphere	MKKTMMMAAVLVLVGCGPKKEAAPAADTAAMAPATSDTGMGMSNMSHDSMPMSSDSTMARDTTKK*
Ga0126313_108116542	3300009840	Serpentine Soil	MKKIMMLAATLAMVGCGEKKADTMPADTAAMAPAAAPADTGTGMGGMAHDSGMTTSDTTMARDTTAK*
Ga0126309_104506722	3300010039	Serpentine Soil	MKKTLMMAAALVVLAGCGEKKTAGAGDTTGMSTTPADTGMAGMSHDSAMPMSDTTMARDTTKK*
Ga0126309_108911141	3300010039	Serpentine Soil	MKKTMMLAAMLVLMGCGEKKADVPAADTAAMAPAAADTGMGGMSHDSAMAPSDSTMARDTTAK*
Ga0126309_110219062	3300010039	Serpentine Soil	AAALVLVGCGEKKADGMAGDTAAMAPAATTTDTGMGMGGMSHDSTAMSSDSTMARDTMSK
Ga0126309_112562021	3300010039	Serpentine Soil	MKKTMMLAAALVLIGCGEKKGADGMTADTAAMAPSSADTGMGMSHDSSSMSSDSTMAR
Ga0126308_105364522	3300010040	Serpentine Soil	MKKIMMLAATLAMVGCGEKKGDVPAADTAAMAPAAADTGMGGMTHDTTMMSDTTMARDTTAK*
Ga0126312_107686552	3300010041	Serpentine Soil	MTKTMMVAAMLVLVGCGEKKAEAPAADTAAMAPAAADTGMGGMTHDTTMMSDTTMARDTTAK*
Ga0126310_114384732	3300010044	Serpentine Soil	MKKIMMLAATLAMVGCGEKKADTMPADTAAMAPAAAPADTGTGMGGMAHDSGMTTSDT
Ga0126311_111313982	3300010045	Serpentine Soil	MKKTMMLAAMFVLVGCGEKKAETLPADTAAMAPAATPADTGMGMAHDSGMMSSDSTMSRDTMAK*
Ga0134128_127769502	3300010373	Terrestrial Soil	MKKTMMMAALLVMVGCGPKKEAAPAADTAAMAPAATDTGMGGMSHDSMPMSSDSTMARDTTKK*
Ga0134126_118363442	3300010396	Terrestrial Soil	MKKIMMMAAVLVLAGCGPKKEAAPAADTAAMAPAASDTGMGSMSHDSMPMSSDSTMARDTTKK*
Ga0137382_110560042	3300012200	Vadose Zone Soil	MAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGGMSHDSAAPMSDSTMARDTTKAKK
Ga0137365_103010272	3300012201	Vadose Zone Soil	MKKTLLMAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGMSHDSAKPMSDSTMARDTTKK*
Ga0137374_104213842	3300012204	Vadose Zone Soil	MKKTLLMAAALVVLAGCGEKKTAGGATDTAGMATPADTGMAGMSHDSAAPMSDTTMARDTTKK*
Ga0137374_112203491	3300012204	Vadose Zone Soil	LVLVGCGEKKGAAPAADTAAMAPAATSTDTGMGMSHDSMPMSSDSTMARDTAKK*
Ga0150985_1114573141	3300012212	Avena Fatua Rhizosphere	MKKTMMLAAALVLVGCGEKKADGMAGDTAGMAPAATTTDTGMGGMSHDSMSMSSDSTMARDTTSK*
Ga0150985_1155890621	3300012212	Avena Fatua Rhizosphere	MKKTLLMAAALVVLAGCGEKKPAGAAGDTTGMMSSDTGMSGGGMAHDSAMPMSDSTMARDTTKK*
Ga0150985_1203768901	3300012212	Avena Fatua Rhizosphere	MKKTLLMAAALVVLAGCGEKKTAGGMTDTAGMATPADTGMAGMSHDSAAPMSDSTMARDTTKK*
Ga0137369_103252202	3300012355	Vadose Zone Soil	MAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGMSHDSAAPMSDSTMARDTTKK*
Ga0137369_106082051	3300012355	Vadose Zone Soil	MKKTMMMAAVLVLVGCGEKKGAAPAADTAAMAPAATSTDTGMGMSHDSMPMSSDSTMARDTAKK*
Ga0137368_103157211	3300012358	Vadose Zone Soil	ATMKKTLLMAAALVVLAGCGEKKTAGGATDTAGMATPADTGMAGMSHDSAAPMSDSTMARDTTKK*
Ga0136635_101311181	3300012530	Polar Desert Sand	MKKTLMLAAVLVLVGCGEKKADGMAGDTAGMAPSGTMSDTGMGMGGMSDSMSMSSDSTMARDTM
Ga0137373_108465662	3300012532	Vadose Zone Soil	MAAALVVLAGCGEKKTAGGATDTAGMATPADTGMAGMSHDSAAPMSDSTMARDTTKK*
Ga0137407_101622042	3300012930	Vadose Zone Soil	MKKTLLMAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGGMSHDSAAPMSDSTMARDTTKAKK*
Ga0153915_104305742	3300012931	Freshwater Wetlands	MKKTMLMAAILVLAGCGEKKAEAPAADTAAMAPMANDTGMGMSHDSMPMSSDSTMARDTTSK*
Ga0164300_100817002	3300012951	Soil	MKKTMMMAAMLVLVGCGPKKEAAPAADTAAMAPATSDTGMAGISHDSTSMPMSSDSTMARDTAKK*
Ga0164298_105091252	3300012955	Soil	MKKTMMMAAMLVLVGCGPKKEAAPAADTAAMAPATSDTGMAGMSHDSTSMPMSSDSTMARDTAKK*
Ga0164298_106980131	3300012955	Soil	TMMMAALLVMVGCGPKKEAAPAADTAAMAPAATDTGMGGMSHDSMPMSSDSTMARDTTKK
Ga0164303_104151782	3300012957	Soil	MMAAVLVLVGCGPKKEAAPAADTAAMAPAATDTGSGMSNMSHDSMPMSSDSTMARDTTKK
Ga0164302_113418561	3300012961	Soil	MKKTMMMAALLVMVGCGPKKEAAPAADTAAMAPAAADTGMGGMSHDSMPMSSDSTMARDTTKK*
Ga0164308_104369992	3300012985	Soil	MKKTMMMAAVLVLVGCGPKKEAAPAADTAAMAPATSDTGMAGMSHDSTSMPMSSDSTMARDTAKK*
Ga0164304_111120451	3300012986	Soil	MKKILLMAAVLVLAGCGPKKSEAPAADTAAMAPATADTGMGGMSHDSMAKSDSTMARDTPKAKK*
Ga0075316_11145682	3300014314	Natural And Restored Wetlands	MKKTMMMAAVLVVLAACGERGAGTPAADTAGMAPAMSDTGMGMSHDSAAMSSDSTMARDTMSR*
Ga0132258_112559503	3300015371	Arabidopsis Rhizosphere	MKKTMMLAAALVLFGCGEKKAETPAADTAAMAPAATPTDTGMGMGGMSHDSMSSDSTMARDTTKK*
Ga0184605_101495972	3300018027	Groundwater Sediment	MKKTLLMAAALVVLAGCGEKKAAGGATDTAGMAMPADTGMAGMSHDSAAPMSDSTMARDTTKK
Ga0184615_100904802	3300018059	Groundwater Sediment	MKKTMMLAAMLVLVGCGEKKAEAPAADTAAMAPAATDTAMGGGMTHDSAMTSDSTMARDTTAK
Ga0190272_112434972	3300018429	Soil	MLAAMLVLVGCGEKKAGDVPAADTAAMAPAAADTGMGGMMHDSAMTSDSTMARDTTAK
Ga0066667_115085112	3300018433	Grasslands Soil	MKRTLLMAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGGMSHDSAAPMSDSTMARD
Ga0190274_114317732	3300018476	Soil	MKKTMMLAAMLVMMGCGEKKADAPAADTAAMAPAATPADTGMGMSHDSSMMSSDSTMARD
Ga0184643_12642812	3300019255	Groundwater Sediment	MKRTLLMAAALVVLAGCGEKKAAGGATDTAGMAMPADTGMAGMSHDSAAPMSDSTMARDTTKK
Ga0190264_100872812	3300019377	Soil	MKKTMMLAAMLVLVGCGEKKAADTMPADTAAMAPAAADTGMGGMTHDSAMTSDTTMARDTTAK
Ga0193701_11042802	3300019875	Soil	MKRTLLMAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGMSHDSA
Ga0222624_15457772	3300021951	Groundwater Sediment	MKKTLLMAAALVVLAGCGEKKTAGAAGDTTGMMSSDTGMAGGMAHDSAAPMSDTTMARDTTKK
Ga0209640_110038231	3300025324	Soil	MKKTLMMAALLGLVGCGEKKAEAPAADTAAMAPMSTDTGMGGMAHDSMSMSDSMMA
Ga0209342_100541282	3300025326	Soil	MKKTLMMAAVLVLVGCGEKKAEAPAADTAAMAPAGADTGMGMGGMAHDSMSMSDSTMARDTTSK
Ga0210142_10016572	3300025552	Natural And Restored Wetlands	MKKTMMLAAMLVLMGCGEKKAGEGMAGDTAAMAPADTGMGEMSHDSAMAPAMSDSTMARDTTAK
Ga0210139_10279362	3300025558	Natural And Restored Wetlands	MKKTMLMAMVLVLAGCGEKKAETMPADTAAMAPATEMSDTGMGMSHDNMTSDSTMARDTTSK
Ga0210087_10750081	3300025559	Natural And Restored Wetlands	PSVSGATMKKTMMMAAVLFVLAGCGERKAETPAADTAGMAPAMSDTGMGMSHDSAAMSSDSTMARDTMSK
Ga0207684_109003611	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKKILLMAAVLVVAGCGPKKSEAPAADTAAMAPATADTGMGGMSHDSMAKSDSTMARDTSKAKK
Ga0209267_12139483	3300026331	Soil	MKKTLMMAAVLVLAGCGPKKAEAPAADTAAMAPATADTGMGGGGMAHDSMAKSDSTMARDTTKAKK
Ga0209682_100038243	3300027716	Wetland Sediment	MRKTLMIAALLVLVGCGEKKAEAPAADTAAMAPMSTGDGMGGMAHDSMSMSDSMMARDTTRK
Ga0209073_100921461	3300027765	Agricultural Soil	MKKTMMMAAVLVMVGCGPKKEAAPAADTAAMAPAAADTGMSMSHDSTSMSSDSTMAR
Ga0209683_103444052	3300027840	Wetland Sediment	MKKTLMIAAMLVLVGCGEKKAEAPAADTAAMAPMSTDTGMAGMAHDSMSMSDSMMARDTTRK
Ga0209382_101526943	3300027909	Populus Rhizosphere	MKKTMMLAAALVLVGCGEKKGETPAADTAAMAPAATPTDTGMGMGGMSHDSMSSDSTMARDTTKK
Ga0307276_101439382	3300028705	Soil	MKKIMMLAATLVMVGCGEKKADTMPADTAAMAPAGAPADTGTGMGGMAHDSGMTTSDTTMARDTTAK
Ga0307313_102004432	3300028715	Soil	MKRTLLMAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGGMSHDSAAPMSDSTMARDTTKK
Ga0307284_102494302	3300028799	Soil	AMLVLVGCGEKKAEAPAADTAAMAPAAADTGMGGMSHDSAMAPSDSTMARDTTKK
Ga0307284_102817822	3300028799	Soil	MKRTLLMAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGMSHDS
Ga0307292_104614872	3300028811	Soil	MKRTLLMAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGGMSHDS
Ga0247825_105326731	3300028812	Soil	MKKTMMLAAMLVMMGCGEKKAETMPADTAAMAPAAADTGMGTMSHDSSAMTSDTT
Ga0307310_101890832	3300028824	Soil	MKKTLMMAAALVVLAGCGEKKTAGGATDTAGMATPADTGMAGMSHDSAAAPMSDSTMARDTTKK
Ga0307278_101006382	3300028878	Soil	MKRTLLMAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGMSHDSAAPMSDTTMARDTTKK
Ga0307277_102800862	3300028881	Soil	MKRTLLMAAALVVLAGCGEKKAAGGATDTAGMATPADTGMAGMSHD
Ga0247826_114170672	3300030336	Soil	MKKTMMLAAMLVMMGCGEKKAETMPADTAAMAPAAADTGMGTMSHDSSAMTSDTTMARDSAAK
Ga0308194_101763812	3300031421	Soil	MKRTLLMAAALVVLAGCGEKKAAGGAMDTAGMATPADTGMAGMSHDSAAPMSDSTMARDTTKAKK
Ga0307408_1009827622	3300031548	Rhizosphere	MKKTMMVAAMLVLVGCGEKKGDVPAADTAAMAPAAADTGMGGMTHDTAMTSDTTMARDTTAK
Ga0310813_100321982	3300031716	Soil	MKKTMMMAAMLVLVGCGPKKETAPAADTAAMAPAAADTGMGMSHDSMPMSSDSTMARDTTKK
Ga0310813_117953592	3300031716	Soil	MKKTLLMAAALVVLAGCGEKKPAGAAGDTTGMMSSDTGMAGGGMAHDSAMPMSDSTMARDTTKK
Ga0307405_100683982	3300031731	Rhizosphere	MKKTMMMAAVLFVLAGCGERKAAGPAADTAGMAPAMSDTGMGMSHDSAAMSSDSTMARDTMTK
Ga0307405_107653002	3300031731	Rhizosphere	MKKIMMLAATLAMVGCGEKKADTMPADTAAMAPAAAPADTGTGMGGMAHDSGMTTSDTTMARDTTAK
Ga0307413_102645421	3300031824	Rhizosphere	MKKTMMMAAMLVVLAACGERGAETPAADTAGMAPAAADTAMGGMSHDTTMMSDTTMARDTTAQ
Ga0307410_116416921	3300031852	Rhizosphere	MKKTMMVAAMLVLVGCGEKKAEAPAADTAAMAPAAADTGMGGMTHDTAMTSDTTMARDTTAK
Ga0308175_1002299502	3300031938	Soil	MTKTLMMAALLVVLAGCGEKRAATPAADTAGMAPAMSDTGMGMSHDTAMMSSDSTMARDTTSK
Ga0307409_1002015632	3300031995	Rhizosphere	MKKTMMMAAMLVVLAACGERGAGTPATDTAGMAPAAADTAMGGMSHDTTMMSDTTMARDTTAQ
Ga0307411_101338681	3300032005	Rhizosphere	MKKTMMVAAMLVLVGCGEKKGDVPAADTAAMAPAAADTGMGGMTHDTAMTSDTTMARDTT
Ga0308173_109097711	3300032074	Soil	AAVLVLVGCGPKKEAAPAADTAAMAPAATDTGMGMSNMSHDSMSMSSDSTMARDTTKK
Ga0310810_109307221	3300033412	Soil	MTKTLMMAALLVVLAGCGEKRAATPAADTAGMAPAMSDTGMGMSHDSAAMSSDSTMARDT
Ga0316628_1005002432	3300033513	Soil	MKKTMLMAAILVLAGCGEKKAEAPAADTAAMAPMANDTGMGMSHDSMPMSSDSTMARDTTSK
Ga0373959_0161439_414_572	3300034820	Rhizosphere Soil	MKKTMMMAAVLVLVGCGPKKEAAPAADTAAMAPAATDTGSGMSNMSHDSMPMS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076987

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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