NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F076977

Metagenome / Metatranscriptome Family F076977

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F076977
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 53 residues
Representative Sequence EDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPVIRLYVDEGVR
Number of Associated Samples 58
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.85 %
% of genes near scaffold ends (potentially truncated) 97.44 %
% of genes from short scaffolds (< 2000 bps) 93.16 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (63.248 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat
(70.940 % of family members)
Environment Ontology (ENVO) Unclassified
(98.291 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(70.940 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 48.08%    Coil/Unstructured: 51.92%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF00145DNA_methylase 43.59
PF01555N6_N4_Mtase 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 43.59
COG0863DNA modification methylaseReplication, recombination and repair [L] 0.85
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 0.85
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 0.85


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A63.25 %
All OrganismsrootAll Organisms36.75 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002493|JGI24185J35167_1045521All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300002493|JGI24185J35167_1090452Not Available524Open in IMG/M
3300002510|JGI24186J35511_1026529All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300002510|JGI24186J35511_1054137Not Available530Open in IMG/M
3300003688|Ga0061020_1034873All Organisms → cellular organisms → Bacteria1352Open in IMG/M
3300003688|Ga0061020_1056403All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300005246|Ga0068638_186475Not Available595Open in IMG/M
3300005452|Ga0068706_1074593Not Available596Open in IMG/M
3300005494|Ga0068668_1113174Not Available581Open in IMG/M
3300005499|Ga0068667_1112667Not Available703Open in IMG/M
3300006848|Ga0101768_1010949All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300006849|Ga0102029_1003963Not Available690Open in IMG/M
3300010023|Ga0130028_103889Not Available700Open in IMG/M
3300010182|Ga0124917_1063091Not Available982Open in IMG/M
3300010182|Ga0124917_1100976Not Available501Open in IMG/M
3300010182|Ga0124917_1141218All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300010189|Ga0124915_1045377Not Available584Open in IMG/M
3300010189|Ga0124915_1076015Not Available544Open in IMG/M
3300010191|Ga0124914_1115456Not Available803Open in IMG/M
3300010191|Ga0124914_1117305Not Available1130Open in IMG/M
3300010195|Ga0124911_1166021All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300010196|Ga0124923_1092098Not Available550Open in IMG/M
3300010251|Ga0124940_1082959All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300010255|Ga0124910_1011180Not Available676Open in IMG/M
3300010256|Ga0124939_1119987Not Available631Open in IMG/M
3300010257|Ga0124913_1221085Not Available920Open in IMG/M
3300010257|Ga0124913_1318563Not Available892Open in IMG/M
3300026237|Ga0209750_1061964Not Available668Open in IMG/M
3300026237|Ga0209750_1080516All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300026237|Ga0209750_1081516Not Available554Open in IMG/M
3300026237|Ga0209750_1092356Not Available508Open in IMG/M
3300026509|Ga0209809_1140948Not Available552Open in IMG/M
3300027279|Ga0209691_1029288Not Available1213Open in IMG/M
3300027279|Ga0209691_1084182Not Available532Open in IMG/M
3300031245|Ga0308395_1092057All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300031245|Ga0308395_1099457All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300031508|Ga0308394_1092042All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300031508|Ga0308394_1099631Not Available592Open in IMG/M
3300031509|Ga0308399_1013198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2227Open in IMG/M
3300031509|Ga0308399_1058008Not Available834Open in IMG/M
3300031512|Ga0308397_1056459Not Available936Open in IMG/M
3300031512|Ga0308397_1057996All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300031512|Ga0308397_1094256Not Available649Open in IMG/M
3300031512|Ga0308397_1109697Not Available584Open in IMG/M
3300031512|Ga0308397_1133944Not Available509Open in IMG/M
3300031513|Ga0308412_1020992All Organisms → cellular organisms → Bacteria2717Open in IMG/M
3300031513|Ga0308412_1218958Not Available509Open in IMG/M
3300031514|Ga0308390_1066581All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300031514|Ga0308390_1112765Not Available569Open in IMG/M
3300031515|Ga0308396_1054492Not Available883Open in IMG/M
3300031515|Ga0308396_1080799All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300031516|Ga0308398_1060680All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300031516|Ga0308398_1102596Not Available622Open in IMG/M
3300031517|Ga0308392_1008729All Organisms → cellular organisms → Bacteria → Terrabacteria group3186Open in IMG/M
3300031518|Ga0308389_1083969All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300031518|Ga0308389_1122008Not Available563Open in IMG/M
3300031518|Ga0308389_1141755Not Available502Open in IMG/M
3300031567|Ga0308391_1046383Not Available978Open in IMG/M
3300031568|Ga0308393_1088271Not Available670Open in IMG/M
3300031568|Ga0308393_1137114Not Available504Open in IMG/M
3300031767|Ga0308401_1000755Not Available9185Open in IMG/M
3300031767|Ga0308401_1037932Not Available1009Open in IMG/M
3300031767|Ga0308401_1077669Not Available648Open in IMG/M
3300031767|Ga0308401_1118552Not Available500Open in IMG/M
3300031783|Ga0308418_1039756All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300031812|Ga0308411_10109209Not Available1044Open in IMG/M
3300031865|Ga0308408_1060598Not Available901Open in IMG/M
3300031865|Ga0308408_1110876Not Available602Open in IMG/M
3300031875|Ga0308405_1065970All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300031875|Ga0308405_1113826All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300031875|Ga0308405_1123318Not Available611Open in IMG/M
3300031878|Ga0308404_1028390All Organisms → cellular organisms → Bacteria1201Open in IMG/M
3300031878|Ga0308404_1042513All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300031878|Ga0308404_1054314Not Available808Open in IMG/M
3300031878|Ga0308404_1106144Not Available544Open in IMG/M
3300031948|Ga0308406_1118274Not Available526Open in IMG/M
3300031950|Ga0308417_1031678All Organisms → cellular organisms → Bacteria2428Open in IMG/M
3300031950|Ga0308417_1094230All Organisms → cellular organisms → Bacteria1081Open in IMG/M
3300031950|Ga0308417_1101528All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300031950|Ga0308417_1104796Not Available999Open in IMG/M
3300031950|Ga0308417_1116171Not Available927Open in IMG/M
3300031950|Ga0308417_1132541All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300031950|Ga0308417_1132765Not Available840Open in IMG/M
3300031950|Ga0308417_1173294Not Available691Open in IMG/M
3300031950|Ga0308417_1184895Not Available660Open in IMG/M
3300031950|Ga0308417_1208537Not Available607Open in IMG/M
3300031958|Ga0308410_1071795Not Available1037Open in IMG/M
3300031966|Ga0308420_1098500Not Available944Open in IMG/M
3300031966|Ga0308420_1104972Not Available902Open in IMG/M
3300031980|Ga0308403_1004149Not Available3936Open in IMG/M
3300031980|Ga0308403_1015225All Organisms → cellular organisms → Bacteria1844Open in IMG/M
3300031980|Ga0308403_1029522All Organisms → cellular organisms → Bacteria1222Open in IMG/M
3300031980|Ga0308403_1034870Not Available1100Open in IMG/M
3300031980|Ga0308403_1112949Not Available522Open in IMG/M
3300031980|Ga0308403_1117607Not Available509Open in IMG/M
3300032033|Ga0308402_1060020All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300032033|Ga0308402_1066419Not Available700Open in IMG/M
3300032034|Ga0308407_1075220Not Available718Open in IMG/M
3300032034|Ga0308407_1117368Not Available531Open in IMG/M
3300032045|Ga0308400_1060612All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300032049|Ga0308416_1002243All Organisms → cellular organisms → Bacteria6120Open in IMG/M
3300032057|Ga0308421_1107553All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300032057|Ga0308421_1156305Not Available507Open in IMG/M
3300032058|Ga0308419_1149335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi610Open in IMG/M
3300032356|Ga0308414_1063222All Organisms → cellular organisms → Bacteria1470Open in IMG/M
3300033886|Ga0308413_015474All Organisms → cellular organisms → Bacteria2805Open in IMG/M
3300033886|Ga0308413_026616All Organisms → cellular organisms → Bacteria1908Open in IMG/M
3300033886|Ga0308413_035214All Organisms → cellular organisms → Bacteria1550Open in IMG/M
3300033886|Ga0308413_068801Not Available948Open in IMG/M
3300033886|Ga0308413_072936All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300033886|Ga0308413_116245All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300034449|Ga0372963_13080Not Available799Open in IMG/M
3300034646|Ga0372965_043858Not Available594Open in IMG/M
3300034647|Ga0372968_031583Not Available694Open in IMG/M
3300034648|Ga0372970_015812All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300034650|Ga0372973_058412Not Available531Open in IMG/M
3300034650|Ga0372973_058933Not Available528Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Hot Spring Phototrophic MatEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat70.94%
Anoxygenic And Chlorotrophic Microbial MatEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat24.79%
Anoxygenic And ChlorotrophicEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic3.42%
Terrestrial Hot Spring Microbial MatEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Alkaline → Terrestrial Hot Spring Microbial Mat0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002493Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS undermat 2012EnvironmentalOpen in IMG/M
3300002510Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS upper layer 2012EnvironmentalOpen in IMG/M
3300003688Coassembly of YNP Bryant MS undermat 2012 and YNP Bryant MS upper layer 2012EnvironmentalOpen in IMG/M
3300005246Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2300_T MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005452Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaGEnvironmentalOpen in IMG/M
3300005494Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1600(2)_B MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005499Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1500(2)_B MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006848Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1500(2)_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300006849Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1600(2)_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010023Terrestrial hot spring microbial mat viral communities from Octopus Spring, Yellowstone National Park, Wyoming (2009) spADES assemblyEnvironmentalOpen in IMG/M
3300010182Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0300_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010189Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2000_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010191Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1900_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010195Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1500_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010196Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1200_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010251Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1600(2)_B MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010255Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010256Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1500(2)_B MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010257Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1800_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300026237Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS upper layer 2012 (SPAdes)EnvironmentalOpen in IMG/M
3300026509Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027279Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300031245Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_P4EnvironmentalOpen in IMG/M
3300031508Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_me2EnvironmentalOpen in IMG/M
3300031509Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-60EnvironmentalOpen in IMG/M
3300031512Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T8EnvironmentalOpen in IMG/M
3300031513Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST1-BottomLayerEnvironmentalOpen in IMG/M
3300031514Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20040719_149EnvironmentalOpen in IMG/M
3300031515Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_Pe2EnvironmentalOpen in IMG/M
3300031516Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T9EnvironmentalOpen in IMG/M
3300031517Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20050624_m2EnvironmentalOpen in IMG/M
3300031518Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20040719_148EnvironmentalOpen in IMG/M
3300031567Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20050623_t1EnvironmentalOpen in IMG/M
3300031568Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_ee2EnvironmentalOpen in IMG/M
3300031767Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M1EnvironmentalOpen in IMG/M
3300031783Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090729_R4cdEnvironmentalOpen in IMG/M
3300031812Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-BottomLayerEnvironmentalOpen in IMG/M
3300031865Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe3EnvironmentalOpen in IMG/M
3300031875Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MS13EnvironmentalOpen in IMG/M
3300031878Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M4EnvironmentalOpen in IMG/M
3300031948Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe1EnvironmentalOpen in IMG/M
3300031950Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS65EnvironmentalOpen in IMG/M
3300031958Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-MatCoreEnvironmentalOpen in IMG/M
3300031966Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS55EnvironmentalOpen in IMG/M
3300031980Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M3EnvironmentalOpen in IMG/M
3300032033Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M2EnvironmentalOpen in IMG/M
3300032034Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe2EnvironmentalOpen in IMG/M
3300032045Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-65EnvironmentalOpen in IMG/M
3300032049Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS60EnvironmentalOpen in IMG/M
3300032057Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS60EnvironmentalOpen in IMG/M
3300032058Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS50EnvironmentalOpen in IMG/M
3300032356Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS50EnvironmentalOpen in IMG/M
3300033886Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090729_t10cdEnvironmentalOpen in IMG/M
3300034449Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_2000_MSt2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034646Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_0000_MSt4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034647Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_0600_MSt7 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034648Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_1000_MSt9 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034650Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_1600_MSt12 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24185J35167_104552133300002493Anoxygenic And Chlorotrophic Microbial MatKDGRLFRVVTVFGDLMVGEVVLCAVDGYDVFVDTPGYARGETVELPARLQFLRDGSGRPVIRLYVDEGVR*
JGI24185J35167_109045213300002493Anoxygenic And Chlorotrophic Microbial MatATVFGDLMAGETVLCQVDGYDVFVDSSYARGEMVELPARMQFLRDGSGRPVIKLYVDEGVR*
JGI24186J35511_102652913300002510Anoxygenic And Chlorotrophic Microbial MatVTVFGDLVAGGTVLCAVDGYDVFVDSPGYTRGEMVELPARLQFVRDASGRPVVRLYVDEGVR*
JGI24186J35511_105413723300002510Anoxygenic And Chlorotrophic Microbial MatDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPTIRLYVDEGVR*
Ga0061020_103487313300003688Anoxygenic And Chlorotrophic Microbial MatRVVTVYGDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVG*
Ga0061020_105640333300003688Anoxygenic And Chlorotrophic Microbial MatGRLFRVVTVFGDLMVGEVVLCAVDGYDVFVDSPGYTRGEMVELPARLQFVRDASGRPVVRLYVDEGVR*
Ga0068638_18647523300005246Anoxygenic And Chlorotrophic Microbial MatVDGYDVFVDSSYTRGEMVELPARMQFLRDGSGRPVIKLYVDEGVR*
Ga0068706_107459313300005452Anoxygenic And ChlorotrophicDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPTIRLYVDEGVR*
Ga0068668_111317413300005494Anoxygenic And Chlorotrophic Microbial MatDVFVDSSYARGEMVELPARMQFLRDGSGRPVIKLYVDEGVR*
Ga0068667_111266733300005499Anoxygenic And Chlorotrophic Microbial MatYGDLVAGEDVLCSVDGYDVFVDSPDYSRGEMVSFPARLQFARDGSGRPVIRLYVDEGVR*
Ga0101768_101094913300006848Anoxygenic And Chlorotrophic Microbial MatLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPVIKLYVDEGVR*
Ga0102029_100396313300006849Anoxygenic And Chlorotrophic Microbial MatGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVG*
Ga0130028_10388923300010023Terrestrial Hot Spring Microbial MatVYRVVTVYGDLVVGEDVLCQIDGYDVFVDSPGYARGEMVSFPARLQFVRDSSGRPAVRLYVDEGVR*
Ga0124917_106309133300010182Anoxygenic And Chlorotrophic Microbial MatAGETVLCQVDGYDVFVDSSYARGEMVELPARMQFLRDGSGRPVIRLYVDEGVR*
Ga0124917_110097613300010182Anoxygenic And Chlorotrophic Microbial MatRVVTVFGDLMVGEVVLCAVDGYDVFVDTPGYARGEMVELPARLQFVRDGSGRPVIKLYVDEGVR*
Ga0124917_114121813300010182Anoxygenic And Chlorotrophic Microbial MatSYTRGEMVELPARMQFLRDGSGRPVIKLYVDDGVR*
Ga0124915_104537713300010189Anoxygenic And Chlorotrophic Microbial MatSRKDGRLFRVVTVFGDLMVGDVVLCAVDGYDVFVDTPGYARGEMVELPARLQFLRDGSGRPVIKLYVDEGVR*
Ga0124915_107601523300010189Anoxygenic And Chlorotrophic Microbial MatVDSPDYSRGEMVELPARLQFLRDGSNRPVIRLYVDEGVR*
Ga0124914_111545633300010191Anoxygenic And Chlorotrophic Microbial MatGDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVR*
Ga0124914_111730543300010191Anoxygenic And Chlorotrophic Microbial MatGDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPTIRLYVDEGVR*
Ga0124911_116602133300010195Anoxygenic And Chlorotrophic Microbial MatVLCAVDGYDVFVDTPGYARGEMVELPARLQFLRDGSGRPVIKLYVDEGVR*
Ga0124923_109209813300010196Anoxygenic And Chlorotrophic Microbial MatVYGDLVVGEDVLCSIDGYDVFVDSPDYARGEVVSFPARLQFVRDGSGRPVIKLYVDEGVR
Ga0124940_108295933300010251Anoxygenic And Chlorotrophic Microbial MatGDLVVGEAVLCAVDGYDVFVDTPGYARGEMVELPARLQFVRDGSGRPVIRLYVDEGVR*
Ga0124910_101118033300010255Anoxygenic And Chlorotrophic Microbial MatEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPVIRLYVDEGVR*
Ga0124939_111998713300010256Anoxygenic And Chlorotrophic Microbial MatRVVTVYGDLVAGEDVLCSVDGYDVFVDSPDYSRGEMVSFPARLQFARDGSGRPVIRLYVDEGVR*
Ga0124913_122108533300010257Anoxygenic And Chlorotrophic Microbial MatYGDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVG*
Ga0124913_131856333300010257Anoxygenic And Chlorotrophic Microbial MatAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPTIRLYVDEGVR*
Ga0209750_106196413300026237Anoxygenic And Chlorotrophic Microbial MatAVLCAVDGYDVFVDTPGYARGEMVELPARLQFVRDGSGRPVIRLYVDEGVR
Ga0209750_108051613300026237Anoxygenic And Chlorotrophic Microbial MatDSSYARGEMVELPARMQFLRDGSGKPVIRLYVDEGVR
Ga0209750_108151613300026237Anoxygenic And Chlorotrophic Microbial MatYGDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPTIRLYVDEGVR
Ga0209750_109235613300026237Anoxygenic And Chlorotrophic Microbial MatYGDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVG
Ga0209809_114094833300026509Anoxygenic And ChlorotrophicDVFVDSPDYSRGEMVELPARLQFLRDGSNRPVIRLYVDEGVR
Ga0209691_102928813300027279Anoxygenic And ChlorotrophicDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPTIRLYVDEGVR
Ga0209691_108418233300027279Anoxygenic And ChlorotrophicDVFVDSSYARGEMVELPARMQFLRDGSGRPVIRLYVDEGVR
Ga0308395_109205713300031245Hot Spring Phototrophic MatDVFVDTPGYARGEMVELPARLQFVRDGSGRPVIRLYVDEGVR
Ga0308395_109945713300031245Hot Spring Phototrophic MatDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVR
Ga0308394_109204233300031508Hot Spring Phototrophic MatFVDTPGYARGEMVELPARLQFVRDGSGRPVIRLYVDEGVR
Ga0308394_109963123300031508Hot Spring Phototrophic MatRRDGKTYRIVTVYGDLVAGEDVLCQIDGYDVFVDSPDYARGEMVTFPARLQFSRDGSGKPIVRLYVDEGVR
Ga0308399_101319813300031509Hot Spring Phototrophic MatVICAVDGYDVFVDTPGYTRGEMVELPARLQFARDGSGRPTIRLYVDEGVR
Ga0308399_105800813300031509Hot Spring Phototrophic MatGETVLCAVDGYDVFVDTPGYARGEMVELPARMQFLRDNSGRPVIRLYVDEGCADADS
Ga0308397_105645913300031512Hot Spring Phototrophic MatYGDLVAGEAVLCTVDGYDVFVDAPGYARGELVELPARLQFARDGSGRPVIRLYVDEGVR
Ga0308397_105799613300031512Hot Spring Phototrophic MatLMAGETVLCQVDGYDVFVDSSYARGEMVELPARMQFLRDGSGKPVIRLYVDEGVR
Ga0308397_109425613300031512Hot Spring Phototrophic MatTVFGDLVAGGTVLCAVDGYDVFVDSPGYTRGEMVELPARLQFVRDASGRPVVRLYVDEGV
Ga0308397_110969713300031512Hot Spring Phototrophic MatTVYGDLVVGEDVLCSIDGYDVFVDSPDYARGEVVSFPARLQFARDGSGRPTIRLYVDEGV
Ga0308397_113394413300031512Hot Spring Phototrophic MatFVDSPGYTRGEMVELPARLQFVRDGSGRPVIRLYVDEGVR
Ga0308412_102099253300031513Hot Spring Phototrophic MatESVICQVDGYDVFVDSPDYSRGEMVELPARLQFLRDGSGRPVIKLYVDEGVR
Ga0308412_121895813300031513Hot Spring Phototrophic MatDVFVDSPGYARGELVELPARLQFVRDASGKPAVRLYVDEGVR
Ga0308390_106658113300031514Hot Spring Phototrophic MatYRVVTVYGDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVR
Ga0308390_111276513300031514Hot Spring Phototrophic MatDGRLFRVVTVFGDLMVGEVVLCAVDGYDVFVDTPGYARGEMVELPARLQFVRDGSGRPVIRLYVDEGVR
Ga0308396_105449233300031515Hot Spring Phototrophic MatTSRKNGRVYRVVTVYGDLVVGEDVLCSIDGYDVFVDSPDYARGEVVSFPARLQFVRDGSGRPTIRLYVDEGVR
Ga0308396_108079913300031515Hot Spring Phototrophic MatFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVR
Ga0308398_106068013300031516Hot Spring Phototrophic MatYDVFVDSPDYARGEVVSFPARLQFLRDGSGRPVIKLYVDEGVR
Ga0308398_110259613300031516Hot Spring Phototrophic MatVDTPGYARGEMVELPARLQFLRDGSGRPVIRLYVDEGVR
Ga0308392_100872913300031517Hot Spring Phototrophic MatYGDLVAGETVLCAVDGYDVFVDTPGYARGEMVELPARMQFLRDNSGRPVIRLYVDEGVR
Ga0308389_108396913300031518Hot Spring Phototrophic MatDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEEVR
Ga0308389_112200833300031518Hot Spring Phototrophic MatDVFVDSSYTRGEMVELPARMQFLRDGSGRPVIRLYVDEGVR
Ga0308389_114175513300031518Hot Spring Phototrophic MatISRKDGRTYRVVTVYGDLVVGEDVLCQIDGYDVFVDSPDYARGEMVSFPARLQFSRDGSGKPIVRLYVDEGVR
Ga0308391_104638333300031567Hot Spring Phototrophic MatGDVVICAVDGYDVFVDTPGYTRGEMVELPARLQFARDGSGRPTIRLYVDEGVR
Ga0308393_108827113300031568Hot Spring Phototrophic MatGDLVAGGTVLCAVDGYDVFVDSPGYTRGEMVELPARLQFVRDASGRPVVRLYVDEGVR
Ga0308393_113711413300031568Hot Spring Phototrophic MatIDGYDVFVDSPDYSRGELVAFPARLQFVRDASGRPVVRLYVDEGVR
Ga0308401_100075513300031767Hot Spring Phototrophic MatSRKDGKVYRIVTVYGDLMSGETVLCQVDGYDVFVDSPDYSRGEMVELPARLQFLRDGSGKPVIKLYVDEGVR
Ga0308401_103793213300031767Hot Spring Phototrophic MatGETVLCQVDGYDVFVDSPDYSRGEMVELPARMQFLRDNSGRPVIRLYVDEGVR
Ga0308401_107766923300031767Hot Spring Phototrophic MatTVFGDLMVGDVVICAVDGYDVFVDTPGYTRGEMVELPARLQFLRDGSNRPVIRLYVDEGV
Ga0308401_111855213300031767Hot Spring Phototrophic MatTVFGDLMVGDVVICAVDGYDVFVDTPGYTRGEMVELPARLQFARDGSGRPVMRLYVDEGV
Ga0308418_103975613300031783Hot Spring Phototrophic MatTVFGDLVAGGTVLCAVDGYDVFVDSPGYTRGEMVELPARLQFLRDGSGRPVIRLYVDEGV
Ga0308411_1010920913300031812Hot Spring Phototrophic MatCQVDGCDVFVDSSYTRGEMVELPARLQFVRDASGRPTVRLYVDEGVR
Ga0308408_106059813300031865Hot Spring Phototrophic MatDGKLYRVVTVFGDLVAGGTVLCAVDGYDVFVDSPGYTRGEMVELPARLQFVRDASGRPTVRLYVDEGVR
Ga0308408_111087633300031865Hot Spring Phototrophic MatDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPTIRLYVDEGVR
Ga0308405_106597013300031875Hot Spring Phototrophic MatGYDVFVDSSYARGEMVELPARMQFLRDGSGRPVIKLYVDEGVR
Ga0308405_111382613300031875Hot Spring Phototrophic MatYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVR
Ga0308405_112331813300031875Hot Spring Phototrophic MatVVTVYGDLMSGETVLCQVDGYDVFVDSPDYSRGEMVELPARLQFARDGSGKPVVRLYVDEGVR
Ga0308404_102839013300031878Hot Spring Phototrophic MatLCAVDGYDVFVVSPDYSRGEIVELPARLQFLRDGSGRPVIKLYVNEGVR
Ga0308404_104251313300031878Hot Spring Phototrophic MatVVTVFGDLVAGGTVLCAVDGYDVFVDSPGYTRGEMVELPARLQFVRDASGRPVVRLYVDEGVR
Ga0308404_105431433300031878Hot Spring Phototrophic MatDLMAGGTVLCQVDGYDVFVDSSYTRGEMVELPVRMQFLRDGSGRPVIKLYFDQGVR
Ga0308404_110614413300031878Hot Spring Phototrophic MatPDYARGEVVSFPARLQFLRDGSGRPVIKLYVDEGVR
Ga0308406_111827423300031948Hot Spring Phototrophic MatGEAVLCAVDGYDVFVDTPGYARGEMVELPARLQFVRDGSGRPVIRLYVDEGVR
Ga0308417_103167813300031950Hot Spring Phototrophic MatISRKDGKTYRVATVFGDLMAGETVLCQVDGYDVFVDSSYARGEMVELPARMQFLRDGSGRPVIRLYVDEGVR
Ga0308417_109423013300031950Hot Spring Phototrophic MatGYTRGETVELPARMQFLRDGSGKPLIRLYVDEGVR
Ga0308417_110152813300031950Hot Spring Phototrophic MatVDTPGYARGEMVELPARLQFVRDGSGRPVIRLYVDEGVR
Ga0308417_110479633300031950Hot Spring Phototrophic MatLCQIDGYDVFVDSPDYARGEMVSFPARLQFVRDSSGRPAVRLYVDEGVR
Ga0308417_111617113300031950Hot Spring Phototrophic MatGEDVLCQIDGYDVFVDSPDYSRGELVVFPARLQFVRDASGRPVVRLYVDEGVR
Ga0308417_113254113300031950Hot Spring Phototrophic MatVFVDSPDYSRGEMVELPARLQFVRDASGRPVVRLYVDEGAR
Ga0308417_113276513300031950Hot Spring Phototrophic MatGDLMVGEVVLCAVDGYDVFVDTPGYTRGEMVELPARMQFLRDGSGRPVIKLYVDEGVR
Ga0308417_117329423300031950Hot Spring Phototrophic MatLCAVDGYDVFVDTPGYARGEMVELPARLQFLRDGSGRPVIKLYVDER
Ga0308417_118489513300031950Hot Spring Phototrophic MatRLFRVVTVFGDLMVGESVICTVDGYDVFVDSPDYARGEVVELPARLQFARDGSGRPVIKLYVDEGVR
Ga0308417_120853733300031950Hot Spring Phototrophic MatFGDLMVGEVVLCAVDGYDVFVDTPGYTRGETVELPARMQFLRDGSGRPMIRLYVDEGVR
Ga0308410_107179543300031958Hot Spring Phototrophic MatFVDSSYTRGEMVELPARMQFLRDGSGRPVIKLYVDQGVR
Ga0308420_109850013300031966Hot Spring Phototrophic MatVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVR
Ga0308420_110497233300031966Hot Spring Phototrophic MatVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVG
Ga0308403_100414913300031980Hot Spring Phototrophic MatVDGYDVFVDSPDYSRGEMVELPARMQFLRDNSGRPTIRLYVDEGVRDADS
Ga0308403_101522513300031980Hot Spring Phototrophic MatTYRVATVFGDLMAGGTVLCQVDGYDVFVDSSYTRGEMVELPARMQFLRDGSGRPVIRLYVDEGVR
Ga0308403_102952233300031980Hot Spring Phototrophic MatFGDLMAGETVLCQVDGYDVFVDSSYARGEMVELPARMQFLRDGSGRPVIRLYVDEGVR
Ga0308403_103487013300031980Hot Spring Phototrophic MatFVDTPGYTRGEMVELPARLQFLRDGSNRPVIRLYVDEGVR
Ga0308403_111294913300031980Hot Spring Phototrophic MatAVDGYDVFVDTPGYARGEMVELPARLQFLRDGSGRPVIRLYVDEGVR
Ga0308403_111760713300031980Hot Spring Phototrophic MatVSRKDGRLFRVVTVFGDLMVGDVVICAVDGYDVFVDTPGYTRGEMVELPARLQFARDGSGRPTIRLYVDEGVR
Ga0308402_106002013300032033Hot Spring Phototrophic MatVDGYDVFVDTPGYARGEMVELPARLQFLRDGSGRPVIRLYVDEGVR
Ga0308402_106641913300032033Hot Spring Phototrophic MatGRLFRVVTVFGDLMVGESVICQVDGYDVFVDSPDYSRGEMVELPARLQFLRDGSGRPVIKLYVDEGVR
Ga0308407_107522013300032034Hot Spring Phototrophic MatLYRVVTVFGDLVAGGTVLCAVDGYDVFVDSPGYTRGEMVELPARLQFVRDASGRPVVRLYVDEGVR
Ga0308407_111736833300032034Hot Spring Phototrophic MatGYARGEMVELPARLQFVRDGSGRPVIRLYVDEGVR
Ga0308400_106061213300032045Hot Spring Phototrophic MatVTVYGDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPTIRLYVDEGVR
Ga0308416_100224313300032049Hot Spring Phototrophic MatYDVFVDSPYARGEMVELPARMQFLRDGSGRPTIRLYVDEGVR
Ga0308421_110755313300032057Hot Spring Phototrophic MatKLYRVATVFGDLVLGETVLCSVDGYDVFVDSPYARGEMVELPARMQFLRDSSGRPVVRLYVDEGVR
Ga0308421_115630513300032057Hot Spring Phototrophic MatCAVDGYDVFVDSPGYTRGEMVELPARLQFVRDASGRPTVRLYVDEGVR
Ga0308419_114933513300032058Hot Spring Phototrophic MatGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVR
Ga0308414_106322233300032356Hot Spring Phototrophic MatRIVTIYGDLVVDEIVLCQIDGYDVFVDSPGYARGEMVSFPARLQFARDGSGRPVIKLYVDQGVR
Ga0308413_015474_24_2123300033886Hot Spring Phototrophic MatVTVYGDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGKPVIRLYVDEGVG
Ga0308413_026616_1767_19073300033886Hot Spring Phototrophic MatQIDGYDVFVDSSYARGELVELPARMQFLRDGSGRPVIKLYVDEGVR
Ga0308413_035214_1338_15383300033886Hot Spring Phototrophic MatLFRVVTVFGDLMVGEVVLCAVDGYDVFVDTPGYTRGETVELPARMQFLRDGSGKPLIRLYVDEGVR
Ga0308413_068801_817_9483300033886Hot Spring Phototrophic MatGYDVFVDSSYARGELVELPARLQFVRDGSSRPAIRLYVDEGVR
Ga0308413_072936_3_1223300033886Hot Spring Phototrophic MatFVDSSYARGEMVELPARLQFLRDGSGRPVIKLYVDEGVR
Ga0308413_116245_1_1563300033886Hot Spring Phototrophic MatIVLCAVDGYDVFVDSPDYSRGEIVELPARLQFLRDGSGRPVIKLYVNEGVR
Ga0372963_13080_654_7973300034449Hot Spring Phototrophic MatSVDGYDVFVGSPDYARGEVVEFPARLQFLRDGSGRPVIKLYVDEGVR
Ga0372965_043858_417_5933300034646Hot Spring Phototrophic MatGDLVAGEDVLCSVDGYDVFVDSPDYARGEVVEFPARLQFLRDGSGRPTIRLYVDEGVR
Ga0372968_031583_568_6933300034647Hot Spring Phototrophic MatVFVDSSDYSRGEMVELPARLQFLRDGSGKPVIKLYVDEGVR
Ga0372970_015812_1137_13313300034648Hot Spring Phototrophic MatRIITVFGDLVVGEAVLCAVDGYDVFVDTPGYARGEMVELPARLQFLRDGSGRPVIKLYVDEGVR
Ga0372973_058412_352_5313300034650Hot Spring Phototrophic MatYGDLVAGEDVLCSVDGYDVFVDSPDYSRGEMVSFPARLQFLRDGSNRPVIRLYVDEGVR
Ga0372973_058933_389_5263300034650Hot Spring Phototrophic MatDGYGVFVDSPDYARGEVVSFPARLQFLRDGSGRPVIKLYVDEGVR


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