Metagenome / Metatranscriptome Family F076943

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076943
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	66 residues
Representative Sequence	MGGSGIRSAVGAVVGLCSRWEAGNLLQRACGAMGLGDCTVGMWGFYTDPVSPASLFEFFSGNLADW
Number of Associated Samples	77
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.77 %
% of genes near scaffold ends (potentially truncated)	47.86 %
% of genes from short scaffolds (< 2000 bps)	53.85 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.906 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (30.769 % of family members)
Environment Ontology (ENVO)	Unclassified (75.214 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (69.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.74% β-sheet: 0.00% Coil/Unstructured: 54.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00589	Phage_integrase	6.84
PF13495	Phage_int_SAM_4	4.27
PF01936	NYN	3.42
PF13676	TIR_2	3.42
PF13749	HATPase_c_4	2.56
PF12849	PBP_like_2	1.71
PF02452	PemK_toxin	1.71
PF08867	FRG	1.71
PF13643	DUF4145	1.71
PF14319	Zn_Tnp_IS91	1.71
PF00078	RVT_1	1.71
PF01202	SKI	0.85
PF01230	HIT	0.85
PF13289	SIR2_2	0.85
PF13175	AAA_15	0.85
PF01381	HTH_3	0.85
PF13304	AAA_21	0.85
PF09720	Unstab_antitox	0.85
PF12762	DDE_Tnp_IS1595	0.85
PF08241	Methyltransf_11	0.85
PF11697	DUF3293	0.85
PF00202	Aminotran_3	0.85
PF07927	HicA_toxin	0.85
PF01527	HTH_Tnp_1	0.85
PF01476	LysM	0.85
PF07862	Nif11	0.85
PF03235	DUF262	0.85
PF14338	Mrr_N	0.85
PF01501	Glyco_transf_8	0.85
PF00145	DNA_methylase	0.85
PF01966	HD	0.85
PF00903	Glyoxalase	0.85
PF00383	dCMP_cyt_deam_1	0.85
PF00400	WD40	0.85
PF10987	DUF2806	0.85
PF12358	DUF3644	0.85
PF05016	ParE_toxin	0.85
PF13847	Methyltransf_31	0.85
PF02275	CBAH	0.85
PF13432	TPR_16	0.85
PF04041	Glyco_hydro_130	0.85
PF06282	DUF1036	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	3.42
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.71
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.85
COG1442	Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.85
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.85
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.85
COG3049	Penicillin V acylase or related amidase, Ntn superfamily	Cell wall/membrane/envelope biogenesis [M]	0.85
COG4927	Predicted choloylglycine hydrolase	General function prediction only [R]	0.85
COG5480	Uncharacterized membrane protein	Function unknown [S]	0.85
COG5597	N-acetylglucosaminyl transferase	Cell wall/membrane/envelope biogenesis [M]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.76 %
Unclassified	root	N/A	16.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.76 %
Unclassified	root	N/A	16.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.91 %
Unclassified	root	N/A	16.24 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	13.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.68 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.85 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	13.68 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.71 %
Theionarchaea	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea	0.85 %
bacterium ADurb.Bin236	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin236	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.85 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	13.68 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.71 %
unclassified Theionarchaea	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea	0.85 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.85 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.85 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.85 %
bacterium ADurb.Bin236	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin236	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	10.26 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.71 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	0.85 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.85 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.85 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.85 %
Theionarchaea archaeon DG-70	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea → Theionarchaea archaeon DG-70	0.85 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.85 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.85 %
bacterium ADurb.Bin236	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin236	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Synechococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	5.98 %
Prochlorococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae	1.71 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.85 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.85 %
unclassified Synechococcales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → unclassified Synechococcales	0.85 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.85 %
Albibacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Albibacillus	0.85 %
Desulfobacterales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis	0.85 %
Uliginosibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium	0.85 %
Theionarchaea archaeon DG-70	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea → Theionarchaea archaeon DG-70	0.85 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.85 %
bacterium ADurb.Bin236	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin236	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	5.13 %
Cyanobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium	1.71 %
Microcystaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae	0.85 %
Rhodomicrobium vannielii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → Rhodomicrobium vannielii	0.85 %
Albibacillus kandeliae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Albibacillus → Albibacillus kandeliae	0.85 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.85 %
cyanobiont of Ornithocercus magnificus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → unclassified Synechococcales → cyanobiont of Ornithocercus magnificus	0.85 %
unclassified Uliginosibacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium → unclassified Uliginosibacterium	0.85 %
Candidatus Desulfatibia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia	0.85 %
Theionarchaea archaeon DG-70	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea → Theionarchaea archaeon DG-70	0.85 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.85 %
bacterium ADurb.Bin236	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin236	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
unclassified Synechococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus	3.42 %
Uliginosibacterium sp. TH139	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium → unclassified Uliginosibacterium → Uliginosibacterium sp. TH139	0.85 %
Candidatus Desulfatibia vada	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia → Candidatus Desulfatibia vada	0.85 %
Cyanobium gracile	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → Cyanobium gracile	0.85 %
Microcystis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis	0.85 %
Rhodomicrobium vannielii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → Rhodomicrobium vannielii	0.85 %
Albibacillus kandeliae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Albibacillus → Albibacillus kandeliae	0.85 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.85 %
cyanobiont of Ornithocercus magnificus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → unclassified Synechococcales → cyanobiont of Ornithocercus magnificus	0.85 %
Theionarchaea archaeon DG-70	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea → Theionarchaea archaeon DG-70	0.85 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.85 %
bacterium ADurb.Bin236	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin236	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Synechococcus sp. 1G10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. 1G10	2.56 %
Synechococcus sp. CBW1004	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. CBW1004	0.85 %
Microcystis aeruginosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa	0.85 %
Uliginosibacterium sp. TH139	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium → unclassified Uliginosibacterium → Uliginosibacterium sp. TH139	0.85 %
Candidatus Desulfatibia vada	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia → Candidatus Desulfatibia vada	0.85 %
Cyanobium gracile	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → Cyanobium gracile	0.85 %
Rhodomicrobium vannielii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → Rhodomicrobium vannielii	0.85 %
Albibacillus kandeliae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Albibacillus → Albibacillus kandeliae	0.85 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.85 %
cyanobiont of Ornithocercus magnificus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → unclassified Synechococcales → cyanobiont of Ornithocercus magnificus	0.85 %
Theionarchaea archaeon DG-70	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea → Theionarchaea archaeon DG-70	0.85 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.85 %
bacterium ADurb.Bin236	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin236	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001282\|B570J14230_10111480	Not Available	813	Open in IMG/M
3300002296\|B570J29587_1011568	Not Available	584	Open in IMG/M
3300002381\|B570J29641_1000048	All Organisms → cellular organisms → Bacteria	6976	Open in IMG/M
3300002381\|B570J29641_1005427	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300002394\|B570J29614_1002285	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300002408\|B570J29032_108942743	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300002408\|B570J29032_109136709	Not Available	607	Open in IMG/M
3300002408\|B570J29032_109604474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. CBW1004	926	Open in IMG/M
3300002408\|B570J29032_109790329	All Organisms → cellular organisms → Bacteria → Proteobacteria	1336	Open in IMG/M
3300002408\|B570J29032_109950290	All Organisms → cellular organisms → Bacteria	5092	Open in IMG/M
3300002835\|B570J40625_100066490	All Organisms → cellular organisms → Bacteria	4847	Open in IMG/M
3300002835\|B570J40625_100110295	All Organisms → cellular organisms → Bacteria	3337	Open in IMG/M
3300002835\|B570J40625_100153067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. 1G10	2626	Open in IMG/M
3300002835\|B570J40625_100317149	All Organisms → cellular organisms → Bacteria → Proteobacteria	1567	Open in IMG/M
3300002835\|B570J40625_100590384	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300002835\|B570J40625_100704506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium → unclassified Uliginosibacterium → Uliginosibacterium sp. TH139	903	Open in IMG/M
3300004125\|Ga0066182_10115752	Not Available	649	Open in IMG/M
3300005525\|Ga0068877_10018447	All Organisms → cellular organisms → Bacteria → Proteobacteria	4966	Open in IMG/M
3300005525\|Ga0068877_10034766	All Organisms → cellular organisms → Bacteria	3427	Open in IMG/M
3300005527\|Ga0068876_10257240	Not Available	1000	Open in IMG/M
3300005662\|Ga0078894_10082534	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300006917\|Ga0075472_10410877	Not Available	670	Open in IMG/M
3300007169\|Ga0102976_1022345	All Organisms → cellular organisms → Bacteria	2231	Open in IMG/M
3300007212\|Ga0103958_1087444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3895	Open in IMG/M
3300008106\|Ga0114339_1000471	All Organisms → cellular organisms → Bacteria	22505	Open in IMG/M
3300008117\|Ga0114351_1088777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → Cyanobium gracile	2681	Open in IMG/M
3300009068\|Ga0114973_10329087	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300009152\|Ga0114980_10059340	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300009152\|Ga0114980_10592707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa	626	Open in IMG/M
3300009152\|Ga0114980_10758872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	541	Open in IMG/M
3300009164\|Ga0114975_10361729	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300009180\|Ga0114979_10031819	All Organisms → cellular organisms → Bacteria	3341	Open in IMG/M
3300009180\|Ga0114979_10105577	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300009180\|Ga0114979_10216509	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1156	Open in IMG/M
3300009180\|Ga0114979_10683442	Not Available	582	Open in IMG/M
3300009184\|Ga0114976_10009996	All Organisms → cellular organisms → Bacteria → Proteobacteria	5886	Open in IMG/M
3300009184\|Ga0114976_10055200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	2332	Open in IMG/M
3300009184\|Ga0114976_10096417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1692	Open in IMG/M
3300009184\|Ga0114976_10390151	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300009184\|Ga0114976_10511560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia → Candidatus Desulfatibia vada	618	Open in IMG/M
3300009184\|Ga0114976_10599527	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300009187\|Ga0114972_10110257	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300010885\|Ga0133913_10530335	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	3099	Open in IMG/M
3300010885\|Ga0133913_12460424	Not Available	1271	Open in IMG/M
3300012707\|Ga0157623_1090598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	540	Open in IMG/M
3300012716\|Ga0157605_1045356	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin236	631	Open in IMG/M
3300012716\|Ga0157605_1202904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	614	Open in IMG/M
3300012720\|Ga0157613_1265015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. 1G10	1331	Open in IMG/M
3300012781\|Ga0138286_1281272	Not Available	1012	Open in IMG/M
3300013004\|Ga0164293_10037548	All Organisms → cellular organisms → Bacteria → Proteobacteria	3988	Open in IMG/M
3300013004\|Ga0164293_10044664	All Organisms → cellular organisms → Bacteria	3604	Open in IMG/M
3300013004\|Ga0164293_10075457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. 1G10	2642	Open in IMG/M
3300013004\|Ga0164293_10077437	All Organisms → cellular organisms → Bacteria	2602	Open in IMG/M
3300013005\|Ga0164292_10038992	All Organisms → cellular organisms → Bacteria	3796	Open in IMG/M
3300013005\|Ga0164292_10042425	All Organisms → cellular organisms → Bacteria	3619	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10055719	All Organisms → cellular organisms → Bacteria	3744	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10897141	Not Available	537	Open in IMG/M
3300013295\|Ga0170791_11172949	Not Available	1436	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10138035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	1650	Open in IMG/M
3300020159\|Ga0211734_10306706	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300020511\|Ga0208593_1006718	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea → Theionarchaea archaeon DG-70	1409	Open in IMG/M
3300020529\|Ga0208233_1000357	All Organisms → cellular organisms → Bacteria	8590	Open in IMG/M
3300020529\|Ga0208233_1002118	All Organisms → cellular organisms → Bacteria	3541	Open in IMG/M
3300020539\|Ga0207941_1018460	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300020546\|Ga0208853_1002336	All Organisms → cellular organisms → Bacteria	4827	Open in IMG/M
3300020547\|Ga0208361_1002666	All Organisms → cellular organisms → Bacteria	3210	Open in IMG/M
3300020550\|Ga0208600_1046938	Not Available	651	Open in IMG/M
3300020554\|Ga0208599_1002070	All Organisms → cellular organisms → Bacteria → Proteobacteria	3801	Open in IMG/M
3300020557\|Ga0208231_1061829	Not Available	567	Open in IMG/M
3300020559\|Ga0208083_1004556	All Organisms → cellular organisms → Bacteria	3161	Open in IMG/M
3300020559\|Ga0208083_1008571	All Organisms → cellular organisms → Bacteria	2169	Open in IMG/M
3300020574\|Ga0208221_1008221	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300021601\|Ga0194061_1007138	All Organisms → cellular organisms → Bacteria	5136	Open in IMG/M
3300027581\|Ga0209651_1205470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium	513	Open in IMG/M
3300027734\|Ga0209087_1190003	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300027747\|Ga0209189_1395005	Not Available	515	Open in IMG/M
3300027749\|Ga0209084_1356298	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300027760\|Ga0209598_10042669	All Organisms → cellular organisms → Bacteria → Proteobacteria	2398	Open in IMG/M
3300027763\|Ga0209088_10008378	All Organisms → cellular organisms → Bacteria	5691	Open in IMG/M
3300027763\|Ga0209088_10039757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → unclassified Synechococcales → cyanobiont of Ornithocercus magnificus	2329	Open in IMG/M
3300027763\|Ga0209088_10052598	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300027763\|Ga0209088_10089238	Not Available	1429	Open in IMG/M
3300027969\|Ga0209191_1027047	All Organisms → cellular organisms → Bacteria	2786	Open in IMG/M
3300027974\|Ga0209299_1005495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	6386	Open in IMG/M
3300031758\|Ga0315907_10006140	All Organisms → cellular organisms → Bacteria	12822	Open in IMG/M
3300031784\|Ga0315899_11038056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	725	Open in IMG/M
3300031786\|Ga0315908_11056562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Albibacillus → Albibacillus kandeliae	651	Open in IMG/M
3300031951\|Ga0315904_10036171	All Organisms → cellular organisms → Bacteria	5673	Open in IMG/M
3300031951\|Ga0315904_10042632	All Organisms → cellular organisms → Bacteria	5146	Open in IMG/M
3300031951\|Ga0315904_10167074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	2205	Open in IMG/M
3300031951\|Ga0315904_10478193	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300031963\|Ga0315901_10685671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → Rhodomicrobium vannielii	762	Open in IMG/M
3300032092\|Ga0315905_10265484	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300032116\|Ga0315903_10618072	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	828	Open in IMG/M
3300033816\|Ga0334980_0038861	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300033816\|Ga0334980_0125263	Not Available	1060	Open in IMG/M
3300033981\|Ga0334982_0007778	All Organisms → cellular organisms → Bacteria	6465	Open in IMG/M
3300033993\|Ga0334994_0137391	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300033996\|Ga0334979_0011008	All Organisms → cellular organisms → Bacteria	6208	Open in IMG/M
3300034020\|Ga0335002_0308259	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300034062\|Ga0334995_0198369	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300034102\|Ga0335029_0020112	All Organisms → cellular organisms → Bacteria	5090	Open in IMG/M
3300034102\|Ga0335029_0111269	All Organisms → cellular organisms → Bacteria → Proteobacteria	1919	Open in IMG/M
3300034102\|Ga0335029_0327824	Not Available	954	Open in IMG/M
3300034103\|Ga0335030_0299562	Not Available	1077	Open in IMG/M
3300034108\|Ga0335050_0133031	All Organisms → cellular organisms → Bacteria → Proteobacteria	1382	Open in IMG/M
3300034111\|Ga0335063_0052543	All Organisms → cellular organisms → Bacteria	2565	Open in IMG/M
3300034112\|Ga0335066_0013083	All Organisms → cellular organisms → Bacteria	5913	Open in IMG/M
3300034120\|Ga0335056_0012968	All Organisms → cellular organisms → Bacteria	5892	Open in IMG/M
3300034120\|Ga0335056_0060078	All Organisms → cellular organisms → Bacteria	2448	Open in IMG/M
3300034122\|Ga0335060_0048530	All Organisms → cellular organisms → Bacteria	2688	Open in IMG/M
3300034272\|Ga0335049_0768428	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300034279\|Ga0335052_0041827	All Organisms → cellular organisms → Bacteria	2843	Open in IMG/M
3300034279\|Ga0335052_0252757	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300034280\|Ga0334997_0689268	Not Available	623	Open in IMG/M
3300034283\|Ga0335007_0076926	All Organisms → cellular organisms → Bacteria	2516	Open in IMG/M
3300034356\|Ga0335048_0085814	All Organisms → cellular organisms → Bacteria → Proteobacteria	1924	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	99.15%
Marine	Environmental → Aquatic → Marine	0.85%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	61.54%
Lentic	Environmental → Aquatic → Freshwater → Lentic	29.06%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	8.55%
Coastal	Environmental → Aquatic → Marine → Coastal	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	61.54%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	17.95%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	11.11%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	8.55%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	30.77%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	24.79%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	17.95%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	8.55%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	5.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.13%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.71%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.71%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.85%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002296	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002381	Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002394	Freshwater microbial communities from Lake Mendota, WI - 22AUG2011 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004125	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007169	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projects	Environmental	Open in IMG/M
3300007212	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Bottom layer) 7 sequencing projects	Environmental	Open in IMG/M
3300008106	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-53-LTR	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012707	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES154 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012716	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES130 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012720	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES141 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012781	Freshwater microbial communities from Lake Simoncouche, Canada - S_130712_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300013137 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1m	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020511	Freshwater microbial communities from Lake Mendota, WI - 15JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020529	Freshwater microbial communities from Lake Mendota, WI - 07SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020539	Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020546	Freshwater microbial communities from Lake Mendota, WI - 03OCT2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020547	Freshwater microbial communities from Lake Mendota, WI - 05AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020557	Freshwater microbial communities from Lake Mendota, WI - 15JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020559	Freshwater microbial communities from Lake Mendota, WI - 07JUL2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020574	Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021601	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L224-21m	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J14230_101114802	3300001282	Freshwater	MGGSGIRSALGATFGLCSRWEAGSLLQRACGAMSLGDCTVGMWGFYTDPVSPAQLFDFFTGNLVDS*
B570J29587_10115681	3300002296	Freshwater	AAGAVVGLCSRWDTGSLLQKACGAMGLVDCTVKTRGFYTDPVSPETLFHFFTGSLADS*
B570J29641_100004810	3300002381	Freshwater	MGESGIRSAVGVVVGLCSRWEAGNLLLRACGAIQLGDCTVGTWGFYTDPVSPEAHFDFFTENLADW*
B570J29641_10054272	3300002381	Freshwater	MGGSGIRSAVGAVVGLCSRWEAGNLLQRACGAMGLGDCTVGMWGFYTDPVSPASLFEFFSGNLADW*
B570J29614_10022852	3300002394	Freshwater	VVGAVVGLCSRLEACNLLQRACGAMGLGDCTVLTWGFYTDPVSPATLFDFFTGNLADS*
B570J29032_1089427433	3300002408	Freshwater	SRWKAVDLLQRACGAMDLGDCTVEKWGFYTDPVSLKALFDFFTRNLAYW*
B570J29032_1091367091	3300002408	Freshwater	GIHSAVGAVVGLCSRWEAGNLLQRACGAMGLGDCTVEMWGFYTDPVSPASLFDSFTGNLADWCIHLAHE*
B570J29032_1096044743	3300002408	Freshwater	RCMGGSGIRSAMGAVVGLCSRWEAGNLLQRACGAIGLGDCTVGSWGFYTDPVSPATLFDLFIGKLAEW*
B570J29032_1097903291	3300002408	Freshwater	MGGSGIRSAVGVVVDLCSRWEAGNLLLRAGGAIQLGDCTVGTWGFYTDPVSPEAHFDFF
B570J29032_1099502902	3300002408	Freshwater	MGGSGIRSAVGAVVGLYSGWEAGNLLHRACGAAGQGDCTVEAWGFYTDPVSPATLFDFFTGNLADW*
B570J40625_1000664902	3300002835	Freshwater	MGGSGIRSAVGAVVGLCNRWEAGNLLQRACGAMGLGDCTVGVWGSYTDPISPATLFDFFAGNLAEW*
B570J40625_1001102951	3300002835	Freshwater	MDGSGIRSAVGAVVGLSGRWEAGNLLQRACGALGLRDWMVAWLGFYTDPV
B570J40625_1001530672	3300002835	Freshwater	MGGSGIRSAVGVVVGLCSRWEAGNLLQRAFGAIELGDWAVGTWRFYTDPVSPEALFVFFTGNLADW*
B570J40625_1003171493	3300002835	Freshwater	MGGSGIRSAVGVVVDLCSRWEAGNLLLRAGGAIQLGDCTVGTWGFYTDPVSPEAHFDFFTENLADW*
B570J40625_1005903841	3300002835	Freshwater	MGGSGIRSAVGVVVGLCSRWEAGNLLEKAGGAIELGDCTAGTWGFYTDPVSPEAHFDFFT
B570J40625_1007045061	3300002835	Freshwater	MGGSGIRSAVGATVGLCSRWEAGSLLQRACGAMSLGDCTVGLWGFYTDPVSPAQLFDFFTGNL
Ga0066182_101157521	3300004125	Freshwater Lake	MGGSGIRSAVGVVVGLCSRWEAGNLLEKAGGPIELGDCTVGTWGFYTDPVSPEAHFDFFTENLADW*
Ga0068877_100184471	3300005525	Freshwater Lake	MGGSGIRSAVGVVVGLSGRWEAGNLLQRACGALGLRDWTVAWLGFYTDPVLSAALFRFFTGNLPGWRRPMVRD*
Ga0068877_100347662	3300005525	Freshwater Lake	MGRSGIRSAVGAVGGLCSRWEAGNLLQRACVAMSLVGLYGGNVGNYTDPVSPAKFFAIFTGNLANW*
Ga0068876_102572402	3300005527	Freshwater Lake	MGGSGIRSAVGAVVGLCSRWEAGNLLQRACCAMGLGDCRVSVWEFYTDPVSPAPFFVIFTGTWRPGDRPLAHE*
Ga0078894_100825341	3300005662	Freshwater Lake	MGGSGIHSAVGAVVGLCSRWEAYSMLQRACGAMGLGDCTVGAWGFYTDPVSQSTLFDFFTGNL
Ga0075472_104108771	3300006917	Aqueous	MTTAKLWHAQRCMGGSGIRSAVGAVVGLSGRWEAGNLLQRACGALGLRDWTVAWLGFYTDPVSPAALFRFFTGNLPVWRSPMVRD*
Ga0102976_10223453	3300007169	Freshwater Lake	MGLHSEKACLLVLRTSMGGSGIRSAVDAVVGLSGRWEAGNMLQRACGAFGLRDWTVAGLGFYTDPVSPTALSCFFTGNLPGWQRPMVRD*
Ga0103958_10874442	3300007212	Freshwater Lake	MGGSGIRSAAGAVVGLCSRWDTGSLLHKACGAMGLVDCTVKTWGFYTDPVSPESLFHFFTGSLAES*
Ga0114339_10004717	3300008106	Freshwater, Plankton	MGGSGIRSAVGVVVGLSGRWEAGNLLQRACGALGLRDWTVTWSGFYTDPVSPAALFRFFTGNLPGSRRPIVRD*
Ga0114351_10887773	3300008117	Freshwater, Plankton	MGAVVGLSSRWEAGNLLQRACGAIGLRDWTVAWLGLYMDPVSPAALFRFF
Ga0114973_103290871	3300009068	Freshwater Lake	MGGSGIRSAVGAVVGLCSRWEAGDLLQRACGAMGVGDCTVEKWGFYADPVSPEALFDFFTGNLADW*
Ga0114980_100593403	3300009152	Freshwater Lake	MGGSGIRSAVGAVVGLYSGWEAGNLLQRACGAVDPGDSTVETWGFYTDPVSPASLFDFCTGNLADW*
Ga0114980_105927072	3300009152	Freshwater Lake	MGGSGIRSAVGALVGLCSRWEGGNLIQRACGEMGLEDCTVGTCGFYPVPVSPATLFDFFI
Ga0114980_107588721	3300009152	Freshwater Lake	MNGSGIRSAVGVVVGQCARWEAGNLLQRTCGAIGPVDCTVRTRGFYTDPGSPA
Ga0114975_103617291	3300009164	Freshwater Lake	RCMDGSGIHTAVGAVVGLSGRWEAGNLLQRACGALGLRDWTVARLGFYTDPVSPAALFRFFTGKLPGWRRQMVRD*
Ga0114979_100318193	3300009180	Freshwater Lake	MDGPGIHSAVGAVVGLCSRWEAGNLLQRACGAMGLGDCTVGMWGFYTDPVTPASLFDFFTGNLADW*
Ga0114979_101055773	3300009180	Freshwater Lake	MGGSGIRSAVGAVVGLYSGWEAGNLLQRACGAVDPGDSTVETWGFYTDPVSPASLFDFCT
Ga0114979_102165092	3300009180	Freshwater Lake	MGGSGIHSAVGVVVGLCSRWEAGDLLQRACGAMDLRVCTVEKWGFYTDPVSPEALFDFDTGNLADWCHPLAHE*
Ga0114979_106834422	3300009180	Freshwater Lake	RSFERCMGGSGIRSAVGAVVGLSSRWEAGNLLQRACGAMGLGDCTVGMWGFYTDPVSPAPFFDFFTGNLADL*
Ga0114976_100099969	3300009184	Freshwater Lake	MDGSDIRSAVGAVVGLSGRWEAGNLLQRACCALGLRDCTVAWLGFYTDPVSPAALFRFFTGNLPGWGCPMVRD*
Ga0114976_100552005	3300009184	Freshwater Lake	MGGSGIRSAVGAVVGLCSRWEAGSLPQRVCGAMSLRDCTVGMWGFYTDPVSPATLI
Ga0114976_100964173	3300009184	Freshwater Lake	MDGSGIHTAVGAVVGLSGRWEAGNLLQRACGALGLRDWTVARLGFYTDPVSPAALFRFFTGKLPGWRRQMVRD*
Ga0114976_103901511	3300009184	Freshwater Lake	SFERFMGGSGIHSAVGVVVGLCSRWEAGDLLQRACGAMDLRVCTVEKWGFYTDPVSPEALFDFDTGNLADWCHPLAHE*
Ga0114976_105115601	3300009184	Freshwater Lake	MGGSGIRSAVGAVVGLYSGWEAGNLLQRACGAVDPGDSTVETWGFYTDPVSPASLFDF
Ga0114976_105995272	3300009184	Freshwater Lake	SWLRPCNTALLAPVKHVTSFERCMGGSGIRSAVGIVVGLCSRWEAGDLLQRACGAMGVGDCTVEEWGLFTDPVSPEALFDFFIGNLADWWYPLAHE*
Ga0114972_101102572	3300009187	Freshwater Lake	MGGSGIRSAVGAVVGLCCRLEVNSLLKRACSAMILGDCSAGKWGFYADPVSPATLIVFFTGNLADWLHPLAHELDRTHRSLCV*
Ga0133913_105303351	3300010885	Freshwater Lake	MGGSGIRSAVDAVVGLCSRWEAGNLLQRACGAMGLGDRTVGKWRFYADPVSTAILFDFFTGNLAGW*
Ga0133913_124604241	3300010885	Freshwater Lake	MGGSGIRSGVGVAVGLCSRGEAGNLLQRACDAVGLVNCTVGEYGFYTDPVSP
Ga0157623_10905982	3300012707	Freshwater	MDGSVIRSAVGAVVCLSGRWEAGNLLQRACGALGLRDWTVAWLGFYTDPVSPAALFRFFTGNLPGWRR
Ga0157605_10453562	3300012716	Freshwater	MDGSVIRSAVGAVVCLSGRWEAGNLLQRACGALGLRDWTVAWLGFYTDPVSPAALFRFFTGNLPGWRRPM
Ga0157605_12029042	3300012716	Freshwater	MGYSNRSAQRCMGGSGIRSAVGAVVGLSSRWEAGSLLQRACAAMSLGDCTVGMWGFYTDP
Ga0157613_12650152	3300012720	Freshwater	MGGSGIRSAVGVVVGLCSRWEAGNLLQRAFGAIELGDCTVGMWGFYTDPVSPGRFSSSFQEIWRTGDIHWPMNEVVR
Ga0138286_12812721	3300012781	Freshwater Lake	MGGSGICSAVRVVVGLCSRWEAGDLLQRACGAMDLGDCTVEQWGFYADPVSPEALFDFYTGNLADW*
Ga0164293_100375484	3300013004	Freshwater	MGGSGIHSAVGAVVGLCSRWEAGNLLQRACGAMGLGDCTVGMWGFYTDPVSPALLFDSFTGNLADW*
Ga0164293_100446645	3300013004	Freshwater	MDGSGIRSAVGAVVGLSGRWDAGNLLQRACGALGLRDWTVAWLGFYTDPVSPAALFRFFTGN
Ga0164293_100754571	3300013004	Freshwater	MGGSGIRSALGATVGLCSRWEVGSLLQKVCGGTGLGDCTVGMWGFYTDPVSPA
Ga0164293_100774371	3300013004	Freshwater	MGGSGIRSALGAVVGLCCRWEAGNLLQRACGAMGLGDCTVGTWGFYTDPIS
Ga0164292_100389921	3300013005	Freshwater	MGGSGIRSALGAVVGLCCRWEAGNLLQRACGAMGLGDCTVGTWGFYTDPISSATLF
Ga0164292_100424254	3300013005	Freshwater	MGGSGIRSAVGVVVGLCSRWEAGNLLEKAGGVIELGDCTVGAWGFYTDPVSPEALFDSFTGNLADW*
(restricted) Ga0172372_100557191	3300013132	Freshwater	MAGSGIRSAVGAVAGLNGQWEAGILLQKDCGAMGLVDCTVETWGFYTDPVSPA
(restricted) Ga0172375_108971412	3300013137	Freshwater	AVVGLSGQWEAGSLLQRVCGAMGLVDCTVETWGFYTDPVSPASLFHFFIGSLAGS*
Ga0170791_111729492	3300013295	Freshwater	MDGSGIRSAVGAVVGLSGRWEAGNLLQRACGALGLRDWTVAWFGFYTDPVSPAALFRFFTGNLPGWRRPMVRD*
(restricted) Ga0172376_101380353	3300014720	Freshwater	MGGSGIRSAVGAVVGLSGQWEAGSLLQKYCGAMGLVDCTVETWGFYTDPVSPASLFHFFIGSLVDSWHPLIHQ*
Ga0211734_103067063	3300020159	Freshwater	MGKSGIRSAVGVVVGLCSRWEAGNLLLRAGGAIQLGDCTVGTWGFYTDTVSPEAHFDFFTENLADW
Ga0208593_10067181	3300020511	Freshwater	MGGSGIRSAVGAVVGLYSGWEAGNLLHRACGAAGQGDCTVEAWGFYTDPVSPATLFDFFTGNLA
Ga0208233_10003571	3300020529	Freshwater	MGESGIRSAVGVVVGLCSRWEAGNLLLRACGAIQLGDCTVGTWGFYTDPVSPEAHFDFFTENLADW
Ga0208233_10021182	3300020529	Freshwater	MDGSGIRSAVGAVVGLSGRWEAGNLLQRACGALGLRDCTVAWLGFYTDPVSPAALSRFFTGNLPGWRRPMVRD
Ga0207941_10184601	3300020539	Freshwater	IRSAVGAVVGLSGRWEAGNLLQRACGALGLRDCTVAWLGFYTDPVSPAALSRFFTGNLPGWRRPMVRD
Ga0208853_10023365	3300020546	Freshwater	MGGSGIRSAVGAVVGLCNRWEAGNLLQRACGAMGLGDCTVGVWGSYTDPISPATLFDFFAGNLAEW
Ga0208361_10026662	3300020547	Freshwater	MGGSGIRSAVGATVGLCSRWEAGSLLQRACGAMSLGDCTVGMWGFYTDPVSPEALFDFFTGNLPGWRHPLARD
Ga0208600_10469381	3300020550	Freshwater	GGSGIRSAVGVVVGLCSRWEAGNLLQRAFGAIELGDWAVGTWRFYTDPVSPEALFVFFTGNLADW
Ga0208599_10020701	3300020554	Freshwater	MGGSGIRSAVGVVVGLCSPWKAGNLLQKAFGAMGLGNCTVGAWGFYTDPVSPALLFDFLTGNLVDW
Ga0208231_10618291	3300020557	Freshwater	GVVVGLCSPWKAGNLLQKAFGAMGLGNCTVGAWGFYTDPVSPALLFDFLTGNLVDW
Ga0208083_10045563	3300020559	Freshwater	MDGSVIRSAVGAVVGLSGRWEAGNLLQRACGALGLRDCTVAWLGFYTDPVSPAALSRFFTGNLPGWRRPMVRD
Ga0208083_10085713	3300020559	Freshwater	MGGSGIRSAVVAVVGLCSRWESGNLLQSACGAMGLGDSTVETWGIYADPVSQASLFDFLAGNSAD
Ga0208221_10082214	3300020574	Freshwater	MGGSGIRSAVGVVVDLCSRWEAGNLLLRAGGAIQLGDCTVGTWGFYTDPVSPEAHFDFFTENLADW
Ga0194061_10071386	3300021601	Anoxic Zone Freshwater	VYARPDATYRCMGGSGIHSAVGVVVGLCSRWEAGDLLQRACGAMDLRDCTVEKWGFYTDPVSPEALFDFYTGNLADW
Ga0209651_12054701	3300027581	Freshwater Lake	MGGSGIRSAVGVVVGLCSRWEAGNLLEKAGGPIELGDCTVGTWGFYTDPVSPEAHFDFFTENLADW
Ga0209087_11900032	3300027734	Freshwater Lake	MGGSGIRSALGATVGLCSRREAGSLLQRACGATSLGDCTVGMWRFYADPVSPAM
Ga0209189_13950051	3300027747	Freshwater Lake	SALGAVAGLCSRWEAGNLLQRACGAIGLGHCTVGRWGFYTDPISPATLFEFFTGNLADW
Ga0209084_13562982	3300027749	Freshwater Lake	PFPAFLKSIERCMGGSGIRSAVGAVVGLSGRWGAGNLLQRACSALGMRDCTVAWLGFYTDPVSPAALFRFFTGNLPGWRRPMVRD
Ga0209598_100426695	3300027760	Freshwater Lake	MGGSGIRSAVGAVVGLCCRLEVNSLLKRACSAMILGDCSAGKWGFYADPVSPATLIVFFTGNLADWLHPLAHELDRTHRSLCV
Ga0209088_100083782	3300027763	Freshwater Lake	MLNLPRSGLVQRCMDGSGIHTAVGAVVGLSGRWEAGNLLQRACGALGLRDWTVARLGFYTDPVSPAALFRFFTGKLPGWRRQMVRD
Ga0209088_100397574	3300027763	Freshwater Lake	MDGPGIHSAVGAVVGLCSLWEASNLLQRACGAMGQGDCTVGTWGFYTDPVLPATLFDFFTGNLTDWCIRLAHE
Ga0209088_100525981	3300027763	Freshwater Lake	MGGSGIHSAVGVVVGLCSRWEAGDLLQRACGAMDLRVCTVEKWGFYTDPVSPEALFDFDTGNLADWCHPLAHE
Ga0209088_100892382	3300027763	Freshwater Lake	MAVVVGLCRRWEAGNLLQRACGAIELGDCTVGTWGFYTDPVSPEALFDFITGNLADWWHPLPHE
Ga0209191_10270474	3300027969	Freshwater Lake	MDGSGIHTAVGAVVGLSGRWEAGNLLQRACGALGLRDWTVARLGFYTDPVSPAALFRFFTGKLPGWRRQMVRD
Ga0209299_10054954	3300027974	Freshwater Lake	MDGSGIRSAVGAVVGLSGRWEAGNLLQRACGALGLRDWTVARLGFYTDPVSPAALFRFFTGSLPGWRRQMVRD
Ga0315907_100061406	3300031758	Freshwater	MGGSGIRSAVGVVVGLSGRWEAGNLLQRACGALGLRDWTVTWSGFYTDPVSPAALFRFFTGNLPGSRRPIVRD
Ga0315899_110380562	3300031784	Freshwater	EDTDHGLPVQLTSMGGSGIRFVVGTVACLFNRCEAGSLLKGACGAMDLGDCTVGRWGFYADPVSPAALSDFFTGHLADW
Ga0315908_110565621	3300031786	Freshwater	MGGSGIHSAVGVVVGLCSRWEAGDLLERACGAMDLRDCTVEKWGFYTDPV
Ga0315904_100361716	3300031951	Freshwater	MGGSGIRSVVGAVVGLCSRLEAGNLLQRACGAMGLGDCTVLTWGFYTDPVSPATLFDFFTENLADS
Ga0315904_100426321	3300031951	Freshwater	MGGSDIRSALGVVVVLSGRWEAGNLLQRACGALGLRDWMVTWSGFYTDPV
Ga0315904_101670741	3300031951	Freshwater	VGRIRIGFGSGERCMGGSGIRSEVGAAVGLSSRWEAGNLLQRACGAVGLGDCTVGMRGFYADPVSSATLFDFCAGNLADW
Ga0315904_104781931	3300031951	Freshwater	VVGAVVGLCSRLEAGNLLQRACGAMGLGDCTVLTWGFYTDPVSPATLFDFFTGNLADS
Ga0315901_106856711	3300031963	Freshwater	MGGSGIRSAVGVVVGLSGRWEAGNLLQRACGALGLRDWTVAWLGFYTDPV
Ga0315905_102654843	3300032092	Freshwater	MGGSGIHSAVGVVVGLCSRWEAGDLLERACGAMDLRDCTVEKWGFYTDPVSPEALFDFFTGNLADWCHLLTHE
Ga0315903_106180721	3300032116	Freshwater	MGGSGIRSAMGAVVGLCSRWEASNLLQRACVAMGLADCTVEPWGFYPDPVSPATLFDFFIRKLAVW
Ga0334980_0038861_248_469	3300033816	Freshwater	MGGSGIRSAVGAVVGLSGRREAGNLLQRACGAVGLRDWTVAWWGFYTDPVSPVALFRFFTGNPPGWRRPMVRD
Ga0334980_0125263_523_723	3300033816	Freshwater	MGGSGIRSAVGVVVGLCSRWEAGNLLEKAGGVIELGDCTVGAWGFYTDPVSPEALFDSFTGNLADW
Ga0334982_0007778_5701_5922	3300033981	Freshwater	MDGSGIRSAVGAVVGLSGRWEAGNLLQRACGALGLRDWMVAWLGFYTDPVSPAALFRFFTGNLPGWRRQMVRD
Ga0334994_0137391_2_163	3300033993	Freshwater	VGLCSRWEAGNLLLRACGAIQLGDCTVGTWGFYTDPVSPEAHFDFFTENLADW
Ga0334979_0011008_285_485	3300033996	Freshwater	MGGSGIRSAVGAVVGLSSRWEAGSLLQRACAAMSLGDCTVGMWGFYTDPVSPAQFFDFFAGNLVDS
Ga0335002_0308259_3_218	3300034020	Freshwater	GSGIRSAVGAVVGLSGRWEAGNLLQRACGALGLRDWTVAWLGFYTDPVSPAALFRFFTGNLPGWRRPMVRD
Ga0334995_0198369_615_836	3300034062	Freshwater	MLSIQRYMGGSGIHSAVGAVVSLCSRWETGNLLQRAYGAMGLGDCTVRRWGFYADPVSQAALFDFFTENLADW
Ga0335029_0020112_2599_2799	3300034102	Freshwater	MGGSGIRSALGAVVGLCSRWEAGNLLQRACGAMELGDCTVGTWGFYTDPISPATLFEFFTGNLADW
Ga0335029_0111269_1720_1917	3300034102	Freshwater	MGGSGIRSALGAVVGLCSRWEAGNLLQRACSAMELGDCTVGKWGFYTDPISPATLFEFFTGNLADW
Ga0335029_0327824_566_766	3300034102	Freshwater	MGESGIRSAVGVVVGLCSRWEAGNLLLRAGGAIELGDCTVGTWEFYTDPVAPEAHFDFFTENLADW
Ga0335030_0299562_869_1075	3300034103	Freshwater	RCMGGSGIHSAVGAVVGLCSRWEAGNLLQRACEAMGLEDCTVETRGFYTDPVSPAALFDFITEHLADW
Ga0335050_0133031_1201_1380	3300034108	Freshwater	MGGSGIRSAVGVVVDLCSRWEAGNLLLRAGGAIQLGDCTVGTWGFYTDPVSPEAHFDFFT
Ga0335063_0052543_1_171	3300034111	Freshwater	MDGSGIRSAVGAVVGLSGSWEAGNLLQRACGALGLRDCTVAWLGFYTDPVSPAALSR
Ga0335066_0013083_3_191	3300034112	Freshwater	MDGSGIRSAVGAVVGLSGRWEAGNLLQRACGALGLRDWMVAWLGFYTDPVSPAALFRFFTGNL
Ga0335056_0012968_5723_5890	3300034120	Freshwater	MDGSGIRSAVGAVVGLSGRWEAGNLLQRACGALGLRDWTVAWLGFYTDPVSPAALF
Ga0335056_0060078_1073_1294	3300034120	Freshwater	MDGSGIRSAMGAVVGLSGRWEAGNLLQRACGALGLRDWTVAWLGFYTDPVSPAALFRFFTGNLPGWRRPMVRD
Ga0335060_0048530_572_772	3300034122	Freshwater	MGGSGIHSAVGAVVGLCSRWEAGNLLQRACGAMGLGDCTVGMWGFYTDPVSPALLFDSFTGNLADW
Ga0335049_0768428_327_572	3300034272	Freshwater	TNSVLRRCMGGSGIRSAMGAVVGLSGRWEAGNLLQRACGALGLRDWTVAWLGFYTDPVSPAALFRFFTGNLPGWRRPMVRD
Ga0335052_0041827_552_752	3300034279	Freshwater	MGGSGIHSAVGAVVGLCSRWEAGNLLQRACGAMGLGDCTVGMWGFYTDPVSPALLFDSITGNLADW
Ga0335052_0252757_1_147	3300034279	Freshwater	MGGSGIRSAVGAVVGLSSRWEAGSLLQRACAAMSLGDCTVGMWGFYTDP
Ga0334997_0689268_3_203	3300034280	Freshwater	MGGSGIRSEVGASVGLCSRWEAGSLLQWACGAVGLGDCTVETRGLYTDPVSPATLFDFCTGNLANW
Ga0335007_0076926_967_1167	3300034283	Freshwater	MGESGIRSAVGVVVGLCSRWVAGNLLPRACGAIQLADCTVGTWGFYTDPVSPEAHFDFFTENLADW
Ga0335048_0085814_1763_1924	3300034356	Freshwater	MGGSGIRSAVGAVVGLCSRWEAGNLLQRACGAMGLGDCTVGMWGFYTDPVSPAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters