Metagenome / Metatranscriptome Family F076896

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076896
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	58 residues
Representative Sequence	MTINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Number of Associated Samples	79
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.54 %
% of genes near scaffold ends (potentially truncated)	43.59 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.650 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (65.812 % of family members)
Environment Ontology (ENVO)	Unclassified (69.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.145 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.67% β-sheet: 0.00% Coil/Unstructured: 63.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00589	Phage_integrase	21.37
PF01738	DLH	21.37
PF07995	GSDH	1.71
PF13356	Arm-DNA-bind_3	0.85
PF05050	Methyltransf_21	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.07 %
Unclassified	root	N/A	23.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.65 %
Unclassified	root	N/A	23.93 %
Viruses	superkingdom	All Organisms → Viruses	3.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.65 %
Unclassified	root	N/A	23.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	72.65 %
Unclassified	root	N/A	23.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	61.54 %
Unclassified	root	N/A	23.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.71 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	47.01 %
Unclassified	root	N/A	23.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	25.64 %
Unclassified	root	N/A	23.93 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	20.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Burkholderiales bacterium LSUCC0115	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	25.64 %
Unclassified	root	N/A	23.93 %
Zwartia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia	20.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
Planktomarina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Burkholderiales bacterium LSUCC0115	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	25.64 %
Unclassified	root	N/A	23.93 %
Zwartia hollandica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	20.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
Planktomarina temperata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Burkholderiales bacterium LSUCC0115	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	25.64 %
Unclassified	root	N/A	23.93 %
Zwartia hollandica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	20.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.42 %
Planktomarina temperata RCA23	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata → Planktomarina temperata RCA23	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000928\|OpTDRAFT_10173906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	669	Open in IMG/M
3300001952\|GOS2224_1037029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	764	Open in IMG/M
3300005941\|Ga0070743_10139584	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300007545\|Ga0102873_1189927	Not Available	617	Open in IMG/M
3300007546\|Ga0102874_1132196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	781	Open in IMG/M
3300007551\|Ga0102881_1152536	Not Available	639	Open in IMG/M
3300007557\|Ga0102821_1046942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1127	Open in IMG/M
3300007630\|Ga0102903_1041719	All Organisms → Viruses → Predicted Viral	1288	Open in IMG/M
3300007630\|Ga0102903_1110801	Not Available	758	Open in IMG/M
3300007634\|Ga0102901_1061566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1083	Open in IMG/M
3300007661\|Ga0102866_1113331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	678	Open in IMG/M
3300007681\|Ga0102824_1218202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	504	Open in IMG/M
3300007692\|Ga0102823_1225304	Not Available	503	Open in IMG/M
3300007706\|Ga0102899_1152542	Not Available	574	Open in IMG/M
3300007992\|Ga0105748_10410162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	585	Open in IMG/M
3300008052\|Ga0102893_1020626	All Organisms → Viruses → Predicted Viral	2024	Open in IMG/M
3300008950\|Ga0102891_1076196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1024	Open in IMG/M
3300008964\|Ga0102889_1066352	All Organisms → Viruses → Predicted Viral	1086	Open in IMG/M
3300008996\|Ga0102831_1058189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1292	Open in IMG/M
3300009024\|Ga0102811_1148084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	878	Open in IMG/M
3300009049\|Ga0102911_1108200	Not Available	795	Open in IMG/M
3300009050\|Ga0102909_1102881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	693	Open in IMG/M
3300009076\|Ga0115550_1104079	All Organisms → Viruses → Predicted Viral	1044	Open in IMG/M
3300009080\|Ga0102815_10362958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	803	Open in IMG/M
3300009080\|Ga0102815_10922349	Not Available	501	Open in IMG/M
3300009086\|Ga0102812_10415345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	733	Open in IMG/M
3300009466\|Ga0126448_1050936	Not Available	954	Open in IMG/M
3300009505\|Ga0115564_10249863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	904	Open in IMG/M
3300009508\|Ga0115567_10670621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	622	Open in IMG/M
3300009508\|Ga0115567_10813729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	556	Open in IMG/M
3300016726\|Ga0182045_1041211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	667	Open in IMG/M
3300016742\|Ga0182052_1414459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	584	Open in IMG/M
3300016745\|Ga0182093_1157193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	3077	Open in IMG/M
3300016745\|Ga0182093_1617329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	545	Open in IMG/M
3300016748\|Ga0182043_1335839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	508	Open in IMG/M
3300016766\|Ga0182091_1313546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	558	Open in IMG/M
3300016776\|Ga0182046_1429272	Not Available	734	Open in IMG/M
3300016791\|Ga0182095_1381985	Not Available	616	Open in IMG/M
3300016791\|Ga0182095_1549583	Not Available	807	Open in IMG/M
3300016791\|Ga0182095_1645217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	777	Open in IMG/M
3300017824\|Ga0181552_10115175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1470	Open in IMG/M
3300017824\|Ga0181552_10172971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1134	Open in IMG/M
3300017824\|Ga0181552_10426222	Not Available	632	Open in IMG/M
3300017950\|Ga0181607_10087175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	2000	Open in IMG/M
3300017950\|Ga0181607_10253094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1009	Open in IMG/M
3300017950\|Ga0181607_10607975	Not Available	574	Open in IMG/M
3300017964\|Ga0181589_10836600	Not Available	568	Open in IMG/M
3300018036\|Ga0181600_10082677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1941	Open in IMG/M
3300018036\|Ga0181600_10221828	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300018036\|Ga0181600_10245492	Not Available	927	Open in IMG/M
3300018036\|Ga0181600_10500958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	576	Open in IMG/M
3300018041\|Ga0181601_10092968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1973	Open in IMG/M
3300018041\|Ga0181601_10417062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	714	Open in IMG/M
3300018048\|Ga0181606_10090048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1955	Open in IMG/M
3300018048\|Ga0181606_10347502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	806	Open in IMG/M
3300018410\|Ga0181561_10241483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	863	Open in IMG/M
3300018410\|Ga0181561_10257250	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300018410\|Ga0181561_10286008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	772	Open in IMG/M
3300018410\|Ga0181561_10298103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	752	Open in IMG/M
3300018410\|Ga0181561_10378732	Not Available	646	Open in IMG/M
3300018410\|Ga0181561_10531788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	526	Open in IMG/M
3300018413\|Ga0181560_10583329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	505	Open in IMG/M
3300018415\|Ga0181559_10460656	Not Available	694	Open in IMG/M
3300018416\|Ga0181553_10463980	Not Available	680	Open in IMG/M
3300018416\|Ga0181553_10501307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	649	Open in IMG/M
3300018417\|Ga0181558_10577103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	580	Open in IMG/M
3300018420\|Ga0181563_10087747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata → Planktomarina temperata RCA23	2066	Open in IMG/M
3300018420\|Ga0181563_10104004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1853	Open in IMG/M
3300018420\|Ga0181563_10691978	Not Available	563	Open in IMG/M
3300018420\|Ga0181563_10719040	Not Available	550	Open in IMG/M
3300018876\|Ga0181564_10100360	All Organisms → cellular organisms → Bacteria → Proteobacteria	1812	Open in IMG/M
3300018876\|Ga0181564_10357388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	803	Open in IMG/M
3300020014\|Ga0182044_1386748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	587	Open in IMG/M
3300020051\|Ga0181555_1265438	Not Available	617	Open in IMG/M
3300020051\|Ga0181555_1285548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	583	Open in IMG/M
3300020053\|Ga0181595_10070912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1803	Open in IMG/M
3300020053\|Ga0181595_10126590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1208	Open in IMG/M
3300020173\|Ga0181602_10152055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1069	Open in IMG/M
3300020173\|Ga0181602_10334057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	616	Open in IMG/M
3300020174\|Ga0181603_10112025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1242	Open in IMG/M
3300020176\|Ga0181556_1065340	All Organisms → cellular organisms → Bacteria → Proteobacteria	1811	Open in IMG/M
3300020177\|Ga0181596_10298271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	650	Open in IMG/M
3300020178\|Ga0181599_1036563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	2593	Open in IMG/M
3300020178\|Ga0181599_1125823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1115	Open in IMG/M
3300020178\|Ga0181599_1253716	Not Available	674	Open in IMG/M
3300020182\|Ga0206129_10102246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1498	Open in IMG/M
3300020188\|Ga0181605_10150536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	1102	Open in IMG/M
3300020188\|Ga0181605_10379581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	566	Open in IMG/M
3300020191\|Ga0181604_10379735	Not Available	616	Open in IMG/M
3300020191\|Ga0181604_10393345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	600	Open in IMG/M
3300020194\|Ga0181597_10156623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1159	Open in IMG/M
3300020601\|Ga0181557_1191165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	777	Open in IMG/M
3300020810\|Ga0181598_1095044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1297	Open in IMG/M
3300020810\|Ga0181598_1292654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	581	Open in IMG/M
3300021389\|Ga0213868_10528085	Not Available	630	Open in IMG/M
3300021961\|Ga0222714_10407601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	717	Open in IMG/M
3300022905\|Ga0255756_1046373	All Organisms → cellular organisms → Bacteria → Proteobacteria	2495	Open in IMG/M
3300022907\|Ga0255775_1036638	All Organisms → cellular organisms → Bacteria → Proteobacteria	2599	Open in IMG/M
3300022909\|Ga0255755_1056973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1891	Open in IMG/M
3300022909\|Ga0255755_1210376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	735	Open in IMG/M
3300022922\|Ga0255779_1354783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	539	Open in IMG/M
3300022925\|Ga0255773_10089253	All Organisms → cellular organisms → Bacteria → Proteobacteria	1662	Open in IMG/M
3300022925\|Ga0255773_10226138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	822	Open in IMG/M
3300022926\|Ga0255753_1186246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	894	Open in IMG/M
3300022928\|Ga0255758_10045530	All Organisms → cellular organisms → Bacteria → Proteobacteria	2618	Open in IMG/M
3300022928\|Ga0255758_10269871	Not Available	742	Open in IMG/M
3300022928\|Ga0255758_10433047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	513	Open in IMG/M
3300022929\|Ga0255752_10062963	All Organisms → cellular organisms → Bacteria → Proteobacteria	2216	Open in IMG/M
3300023273\|Ga0255763_1232346	Not Available	701	Open in IMG/M
3300024343\|Ga0244777_10755540	Not Available	578	Open in IMG/M
3300024343\|Ga0244777_10764655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	573	Open in IMG/M
3300024346\|Ga0244775_10605123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	889	Open in IMG/M
3300024348\|Ga0244776_10208771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1383	Open in IMG/M
3300025637\|Ga0209197_1089346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	932	Open in IMG/M
3300027571\|Ga0208897_1043638	Not Available	1206	Open in IMG/M
3300027757\|Ga0208671_10248920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Zwartia → Zwartia hollandica	632	Open in IMG/M
3300028115\|Ga0233450_10144152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1190	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.15%
Unclassified	Environmental → Aquatic → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	88.03%
Pelagic	Environmental → Aquatic → Marine → Pelagic	5.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.42%
Coastal	Environmental → Aquatic → Marine → Coastal	1.71%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.85%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	65.81%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	21.37%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	65.81%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	21.37%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	4.27%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.56%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.85%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.85%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.85%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.85%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.85%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.85%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300001952	Marine microbial communities from Newport Harbor, Rhode Island, USA - GS008	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental	Open in IMG/M
3300007681	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009050	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009466	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300016726	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011504BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016742	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011511BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016745	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016748	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011502CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016766	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016776	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011505AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020014	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011503CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020051	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020174	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)	Environmental	Open in IMG/M
3300020176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020601	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022905	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG	Environmental	Open in IMG/M
3300022907	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022922	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300027571	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)	Environmental	Open in IMG/M
3300027757	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)	Environmental	Open in IMG/M
3300028115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OpTDRAFT_101739062	3300000928	Freshwater And Marine	MTINIAGLFSTKDMSPKEVRIEPVFDEIALIGQIEEEFEDLLASPFTNPLLEKSRGYFEL
GOS2224_10370292	3300001952	Marine	MAINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFDDLLASPFTNPLLEKSRGYFGL
Ga0070743_101395841	3300005941	Estuarine	YMTINIAGLFSTKDISPTDVRIEPVFDEVAVTGQVEEEFEDLVASPFANPLLEKTRGYFEL*
Ga0102873_11899271	3300007545	Estuarine	MTINIAGLFSTKDMSPKDVRIEPVFDEVARVGEVEEEFEDLHASPFANPLLEKTRSYFEL
Ga0102874_11321961	3300007546	Estuarine	IRIYMTINIAGLFSTKDMSPKDVRIDPVFDEGALTGQVEEEFEDLNVSPFANPLLEKTRGYFEL*
Ga0102881_11525361	3300007551	Estuarine	MTINIAGLFSPKDISPRDVRMEPVFDEVALTGRVEEEFEDLHASPFANPLLEKTRSYFEL
Ga0102821_10469421	3300007557	Estuarine	ELLITTIRIYMTINIAGLFSTKDMSPKDVRIDPVFDEGALTGQVEEEFEDLNVSPFANPLLEKTRGYFEL*
Ga0102903_10417191	3300007630	Estuarine	IYMTINIAGLFSTKDMSPKDVRIDPVFDEGALTGQVEEEFEDLNVSPFANPLLEKTRGYFEL*
Ga0102903_11108012	3300007630	Estuarine	MTINIAGLFSTKDMSPKDVRIEPVFDEVLLVEEVEEEFEDLHASPFANPLLEKTRSYFEL
Ga0102901_10615662	3300007634	Estuarine	MTINIAGLFSPKDISPRDVRMEPVFDEVAVTGQVEEEFEDLNVSPFANPLLEKTRGYLEL
Ga0102866_11133311	3300007661	Estuarine	MTINIAGLFSTKEMSHKDVRIDPVFDEGALTGQVEEEFEDLNVSPFANPLLEKTRGYFEL
Ga0102824_12182021	3300007681	Estuarine	MTINIAGLFSTKDINPKDVRIEPVFDEVALTGQVDEEFEDLNASPFANPLLEKTRGYFEL
Ga0102823_12253041	3300007692	Estuarine	MTINIAGLFSTKDMSPKDVRIEPVFDEVALTGQVEEEFEDLVASPFANPLLEKTRGYFEL
Ga0102899_11525421	3300007706	Estuarine	MTINIAGLFSTKDMSPRDVRIEPVFDEVALTGQVEEEFEDLVASPFANPLLEKTRGYFEL
Ga0105748_104101621	3300007992	Estuary Water	MTINIAGLFSTKDMSPKDTRIEPVFDEVAVTGQVEEEFEDLVASPFANPLLEKTRGYFEL
Ga0102893_10206261	3300008052	Estuarine	IYMTINIAGLFSTKDISPTDVRIEPVFDEVAVTGQVEEEFEDLVASPFANPLLEKTRGYFEL*
Ga0102891_10761962	3300008950	Estuarine	MTINIAGLFSTKDMSPKDVRIEPVFDEVALTGPVDEEFEDLHVSPLANPLLEKTQRYFEL
Ga0102889_10663521	3300008964	Estuarine	MTINIAGLFSNKDMSPKDVRIEPVFDEVAVAGQVDEEFEDLHASPFANPLLEKTRGYFEL
Ga0102831_10581892	3300008996	Estuarine	MTINIAGLFSTKDMSPKDVRIEPVFDEVAVAGQVDEEFEDLHASPFANPLLEKTRGYFEL
Ga0102811_11480842	3300009024	Estuarine	MTINIAGLFSTKDISPTDVRIEPVFDEVARVGEVEEQFEDLHASPFANPLLEKTRSYFEL
Ga0102911_11082002	3300009049	Estuarine	MTINIAGLFSTKDISPTDVRIEPVFDEVAVTGQVEEEFEDLVASPFANPLLEKTRGYFE
Ga0102909_11028812	3300009050	Estuarine	MTINIAGLFSTKDMSPKDIRIEPVFDEVALVGKVEEGFEDLHVSPFANPLLEKTRGYFEL
Ga0115550_11040792	3300009076	Pelagic Marine	TKDMSPKEVRIEPVFNEISLIGQVEEEFEDLLASPFTNPLLEKSRGYFEL*
Ga0102815_103629582	3300009080	Estuarine	MTINIEGLFSARDMSPSEVRIEPGFDEVALTGQVEEEFEDLNVSPFANPLLEKTRGYFEL
Ga0102815_109223491	3300009080	Estuarine	MTINIGGLFSPKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFANPLLEKSRGNFEL
Ga0102812_104153452	3300009086	Estuarine	MTINIAGLFSTKDMSPKDVRIEPVFDEVAVTGQVEEEFEDLVASPFANPLLEKTRGYFEL
Ga0126448_10509361	3300009466	Meromictic Pond	MTINIAGLFSPKDMSPKEVRIEPVFDEIALIGQVDEDFQDLLASPFTNPLLEKSRGYFEL
Ga0115564_102498632	3300009505	Pelagic Marine	MTINIAGLFSNKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0115567_106706211	3300009508	Pelagic Marine	MTTNIAGLFSTKDMSPKEVRIEPVFDEVALIGQVDEEFEDLLASPFANPLLEKSRGYFEL
Ga0115567_108137291	3300009508	Pelagic Marine	NIAGLFSTKDMSPKEVRIEPVFDEISLIGQVEEEFEDLLASPFTNPLLEKSRGYFEL*
Ga0182045_10412111	3300016726	Salt Marsh	MTINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFQDLLASPFTNPLLEKSRGYFGL
Ga0182052_14144593	3300016742	Salt Marsh	TINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEKEFEDLLASPFANPLLETTRGYFGL
Ga0182093_11571932	3300016745	Salt Marsh	MSINIAGLFSPKDMSPKEVRIEPVFDEVALTGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0182093_16173291	3300016745	Salt Marsh	MTINIVGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFTNPLLEKSRGYFEL
Ga0182043_13358393	3300016748	Salt Marsh	DMAINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFE
Ga0182091_13135461	3300016766	Salt Marsh	TKDMSPKEVRIESVFDEIALIGQVDEEFEDLLASPFTNPLLEKSRGYFEL
Ga0182046_14292721	3300016776	Salt Marsh	MTINIAGLFTTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0182095_13819852	3300016791	Salt Marsh	MTINISGLFSTKDMSPKDVRIEPVFDEVALTGQVDEEFEDLNASPFTNPLLEKTRGYFEL
Ga0182095_15495831	3300016791	Salt Marsh	MAINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFGL
Ga0182095_16452172	3300016791	Salt Marsh	GIYMTINIAGLFSTKYMRPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181552_101151752	3300017824	Salt Marsh	MTINIAGLFSPKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181552_101729712	3300017824	Salt Marsh	MTINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181552_104262221	3300017824	Salt Marsh	MTINIAGLFSTKDMSPKEVRTEPVFDEIVLIGQIEEEFEDLLASPFTN
Ga0181607_100871754	3300017950	Salt Marsh	MTINITGLFSTKDINPKDVRIEPVFDEVALTGQVDEEFEDLNVSPFANPLLEKTRGYFEL
Ga0181607_102530942	3300017950	Salt Marsh	MAINIAGLFSPKDMSPNEVRIEPVFDEISLIGQVKEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181607_106079752	3300017950	Salt Marsh	MTINIACLFSIKDMSPKDVRVEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGY
Ga0181589_108366001	3300017964	Salt Marsh	MTINIAGLFSTKDMSPKDVRIEPVFDEIAPIGQIEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181600_100826771	3300018036	Salt Marsh	IGIHMAINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181600_102218283	3300018036	Salt Marsh	MTINITGLFSTKDINPKDVRIEPVFDEVALTGQVDEEFEDLNASPFTNPLLEKTRGYFEL
Ga0181600_102454921	3300018036	Salt Marsh	GIHMAINIPGLFSTKDMSPKEVRIEPVLDEISLIGQVKEEFEDLLASPFANPLLETTRGYFEL
Ga0181600_105009581	3300018036	Salt Marsh	MTINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFANPLLEKSRDYFEL
Ga0181601_100929681	3300018041	Salt Marsh	MAINITGLFSTKDMSAKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181601_104170622	3300018041	Salt Marsh	TINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181606_100900481	3300018048	Salt Marsh	MAINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181606_103475023	3300018048	Salt Marsh	MTINIAGLFSPKDISPRDVRIEPVFDEVTLTGQVDEEFEDLNASPFTNPLLEKTRGYFEL
Ga0181561_102414832	3300018410	Salt Marsh	MAINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFQDLLASPFTNPLLEKSRGYFGL
Ga0181561_102572503	3300018410	Salt Marsh	KDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181561_102860081	3300018410	Salt Marsh	GLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181561_102981031	3300018410	Salt Marsh	MTINIAGLFTTKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181561_103787321	3300018410	Salt Marsh	MTINIVGLFSTKDMSPKEVRIEPVFDEIALTGQVEEEFEDLLASPFTNPLLAKSGGYFEL
Ga0181561_105317881	3300018410	Salt Marsh	MVINIAGLFSPKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181560_105833292	3300018413	Salt Marsh	MTINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFRNPLLEKSRGYFEL
Ga0181559_104606561	3300018415	Salt Marsh	MTINIAGLFSTKDMSPKEVRIEPVLDEISLIGQVKEEFEDLLASPFANPLLETTRGYFEL
Ga0181553_104639802	3300018416	Salt Marsh	MTINIAGLFSIKDMSPKDVRVEPVFDEIALIGQIEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181553_105013072	3300018416	Salt Marsh	MTINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181558_105771032	3300018417	Salt Marsh	PGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFQDLLASPFTNPLLEKSRGYFGL
Ga0181563_100877471	3300018420	Salt Marsh	MAINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLACPFTNPLLEK
Ga0181563_101040043	3300018420	Salt Marsh	KDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181563_106919781	3300018420	Salt Marsh	MTINIAGLFSTKDTSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181563_107190401	3300018420	Salt Marsh	MIINIAGLFSPKDMSRKEVRIEPVFDEIALIGQVEEEFEDLLASPFTN
Ga0181564_101003603	3300018876	Salt Marsh	MAINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181564_103573881	3300018876	Salt Marsh	MTINIAGLFSPKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFTNPLLEKSRGYFEL
Ga0182044_13867481	3300020014	Salt Marsh	KDMSPKEVRIEPVFDEITLIGQVDEEFDDLLASPFANPLLEKSRGYFEL
Ga0181555_12654382	3300020051	Salt Marsh	MTINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFQDLLASPFTNPLLEKSRGYFGL
Ga0181555_12855483	3300020051	Salt Marsh	IEIYMIINIVGLFSTKDMSPKDVRIQPVFDEIALIGQVDEDFQDLLASPFTNPLLEKSRGYFEL
Ga0181595_100709123	3300020053	Salt Marsh	INIAGLFSPKDMSRKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181595_101265901	3300020053	Salt Marsh	MTINIVGLFSTKDMSPKEVRIEPVFDEIALIGQIEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181602_101520552	3300020173	Salt Marsh	MTINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181602_103340573	3300020173	Salt Marsh	YELLITKIGIHMAINIPGLFSTKDMSPKEVRIEPVFDEIALTGQVEEEFEDLLASPFTNPLLAKSRGYFEL
Ga0181603_101120252	3300020174	Salt Marsh	IYMTINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181556_10653401	3300020176	Salt Marsh	IYMTINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181596_102982712	3300020177	Salt Marsh	MAINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFANPLLEKSRDYFEL
Ga0181599_10365633	3300020178	Salt Marsh	MTINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181599_11258232	3300020178	Salt Marsh	PGLFSTKDMSPKEVRIEPVFDEIALIGQIEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181599_12537162	3300020178	Salt Marsh	MAINIVGLFSTKDMSPKEVRIEPVFDEIALTGQVEEEFEDLLASPFTNPLLAKSRGYFEL
Ga0206129_101022463	3300020182	Seawater	MTINIAGLFSTKDMSPKEVRIEPVFDEISLIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181605_101505362	3300020188	Salt Marsh	MAINIPGLFSTKDMSPKEVRIEPVFDEIALTGQVEEEFEDLLASPFTNPLLAKSRGYFEL
Ga0181605_103795811	3300020188	Salt Marsh	KDMSPNEVRIEPVFDEISLIGQVKEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181604_103797351	3300020191	Salt Marsh	MAINIAGLFSPKDMSPNEVRIEPVFDEISLIGQVKEEFEDLLASPFANPLLETTRGYFEL
Ga0181604_103933451	3300020191	Salt Marsh	MTINIVGLFSTKDMSPKEVRIEPVFDEIALTGQVEEEFEDLLASPFTNPLLAKSRGYFEL
Ga0181597_101566232	3300020194	Salt Marsh	IGIYMTINIAGLFTTKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181557_11911652	3300020601	Salt Marsh	MTINIAGLFSPKDMSRKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0181598_10950441	3300020810	Salt Marsh	MAINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0181598_12926542	3300020810	Salt Marsh	MAINIAGLFSPKDMSRKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0213868_105280851	3300021389	Seawater	MTINIAGLFSTKDMSPKEVRIEPVFDETALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0222714_104076011	3300021961	Estuarine Water	NRIYMTINIAGLFSTKDMSPKDVRIEPVFDEVAVTGQVEEEFEDLNVSPFANPLLEKTRGYFEL
Ga0255756_10463731	3300022905	Salt Marsh	GVYMAINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0255775_10366383	3300022907	Salt Marsh	MTINIAGLFSTKDMSPKDVRIEPVFDEVALTGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0255755_10569734	3300022909	Salt Marsh	VYMAINIPGLFSTKDMSPKEVRIEPVFDEIALIGQVDEEFQDLLASPFTNPLLEKSRGYFEL
Ga0255755_12103761	3300022909	Salt Marsh	INIVGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0255779_13547833	3300022922	Salt Marsh	IGIYMTINIAGLFSPKDMSRKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0255773_100892533	3300022925	Salt Marsh	MTINIAGLFTTKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFTNPLLETTRGYFEL
Ga0255773_102261381	3300022925	Salt Marsh	NIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0255753_11862461	3300022926	Salt Marsh	TKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFTNPLLEKSRGYFEL
Ga0255758_100455301	3300022928	Salt Marsh	AGLFSPKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0255758_102698711	3300022928	Salt Marsh	MAINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLE
Ga0255758_104330472	3300022928	Salt Marsh	TTKDMSPKEVRIEPVFDEIALIGQVDEEFEDLLASPFTNPLLEKSRGYFEL
Ga0255752_100629633	3300022929	Salt Marsh	GLFSTKDMSPKEVRIEPVFDETALIGQVEEEFEDLLASPFANPLLEKSRGYFEL
Ga0255763_12323461	3300023273	Salt Marsh	MAINIAGLFSTKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPL
Ga0244777_107555401	3300024343	Estuarine	MTINIAGLFSTKDISPTDVRIEPVFDEVAVTGQVEEEFEDLVASPFANPLLEKTRGYFEL
Ga0244777_107646552	3300024343	Estuarine	MTINIAGLFSTKDMSPKDVRIDPVFDEGALTGQVEEEFEDLNVSPFANPLLEKTRGYFEL
Ga0244775_106051232	3300024346	Estuarine	TNRIYMTINIAGLFSTKDMSPKGSRIEPVFGEVALTGPVDEEFEDLHVSPLANPLLEKTQRYFEL
Ga0244776_102087713	3300024348	Estuarine	AGLFSTKDMSPKDVRIDPVFDEGALTGQVEEEFEDLNVSPFANPLLEKTRGYFEL
Ga0209197_10893461	3300025637	Pelagic Marine	INIAGLFSTKDMSPKEVRIEPVFDEISLIGQVEEEFVDLLASPFTNPLLEKSRGYFEL
Ga0208897_10436382	3300027571	Estuarine	MTINIAGLFSTKDMSPKDVRIEPVFDEVALTGQVDEEFEDLNASPFANPLLEKTRG
Ga0208671_102489201	3300027757	Estuarine	MTINIEGLFSARDMSPSEVRIEPGFDEVALTGQVEEEFEDLVASPFANPLLEKTRGYFEL
Ga0233450_101441521	3300028115	Salt Marsh	FSPKDMSPKEVRIEPVFDEIALIGQVEEEFEDLLASPFANPLLEKSRGYFEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076896

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences