Metagenome Family F076884

Overview

Basic Information

• Family ID: F076884
• Family Type: Metagenome
• Number of Sequences: 117
• Average Sequence Length: 60 residues
• Representative Sequence: MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY
• Number of Associated Samples: 69
• Number of Associated Scaffolds: 117

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 43.27 %
• % of genes near scaffold ends (potentially truncated): 24.79 %
• % of genes from short scaffolds (< 2000 bps): 77.78 %
• Associated GOLD sequencing projects: 59
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (91.453 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (42.735 % of family members)
• Environment Ontology (ENVO): Unclassified (72.650 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (79.487 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 70.49%
  β-sheet: 0.00%
  Coil/Unstructured: 29.51%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00534	Glycos_transf_1	0.85

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.45 %
All Organisms	root	All Organisms	8.55 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.45 %
Viruses	superkingdom	All Organisms → Viruses	7.69 %
cellular organisms	root	All Organisms → cellular organisms	0.85 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.69 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.85 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.69 %
Francisellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae	0.85 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.69 %
Francisella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae → Francisella	0.85 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.69 %
unclassified Francisella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae → Francisella → unclassified Francisella	0.85 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.69 %
Francisella sp. LA112445	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae → Francisella → unclassified Francisella → Francisella sp. LA112445	0.85 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000756|JGI12421J11937_10142374	Not Available	601
3300002408|B570J29032_109170566	Not Available	620
3300002408|B570J29032_109187646	Not Available	627
3300002447|JGI24768J34885_10012181	Not Available	2842
3300002835|B570J40625_100269644	All Organisms → Viruses → Predicted Viral	1755
3300005580|Ga0049083_10057353	Not Available	1369
3300005585|Ga0049084_10074665	Not Available	1242
3300005585|Ga0049084_10269920	Not Available	568
3300007708|Ga0102859_1144137	Not Available	698
3300007860|Ga0105735_1064324	Not Available	740
3300008108|Ga0114341_10075514	Not Available	2110
3300009068|Ga0114973_10244905	Not Available	968
3300009151|Ga0114962_10281539	Not Available	935
3300009152|Ga0114980_10269083	Not Available	993
3300009154|Ga0114963_10084980	Not Available	1954
3300009155|Ga0114968_10287385	Not Available	923
3300009155|Ga0114968_10749447	Not Available	509
3300009158|Ga0114977_10099102	Not Available	1769
3300009159|Ga0114978_10816783	Not Available	525
3300009160|Ga0114981_10101358	Not Available	1596
3300009164|Ga0114975_10049045	All Organisms → Viruses → Predicted Viral	2491
3300009164|Ga0114975_10258674	Not Available	972
3300009164|Ga0114975_10359865	Not Available	799
3300009164|Ga0114975_10683586	Not Available	543
3300009180|Ga0114979_10042768	Not Available	2852
3300009181|Ga0114969_10068273	Not Available	2337
3300009181|Ga0114969_10268941	Not Available	1017
3300009183|Ga0114974_10568292	Not Available	628
3300009184|Ga0114976_10343516	Not Available	790
3300009185|Ga0114971_10078753	Not Available	2032
3300009187|Ga0114972_10173187	Not Available	1352
3300009187|Ga0114972_10415683	Not Available	773
3300009187|Ga0114972_10532580	Not Available	662
3300009187|Ga0114972_10617670	Not Available	604
3300009187|Ga0114972_10675823	Not Available	572
3300009187|Ga0114972_10679401	Not Available	570
3300010158|Ga0114960_10070507	Not Available	2008
3300010160|Ga0114967_10081764	Not Available	1923
3300010885|Ga0133913_11535302	All Organisms → Viruses → Predicted Viral	1685
3300010885|Ga0133913_11607423	Not Available	1640
3300010885|Ga0133913_13040911	Not Available	1117
3300010885|Ga0133913_13485150	Not Available	1027
3300010885|Ga0133913_13562930	Not Available	1013
3300011009|Ga0129318_10173332	Not Available	672
3300011921|Ga0120089_101595	Not Available	3213
3300011921|Ga0120089_105029	All Organisms → Viruses → Predicted Viral	1279
3300011921|Ga0120089_106934	Not Available	1038
3300013004|Ga0164293_10367328	Not Available	977
3300013004|Ga0164293_10584115	Not Available	727
3300013006|Ga0164294_10028502	Not Available	4489
3300013006|Ga0164294_10403015	Not Available	937
3300013006|Ga0164294_10467475	Not Available	861
3300013006|Ga0164294_10611170	Not Available	739
3300013006|Ga0164294_10856976	Not Available	611
3300013014|Ga0164295_10333898	Not Available	1146
3300013014|Ga0164295_10467076	Not Available	965
3300013014|Ga0164295_10633134	Not Available	824
3300013014|Ga0164295_10798062	Not Available	730
3300013014|Ga0164295_10808957	Not Available	725
3300020048|Ga0207193_1038712	Not Available	5275
3300020141|Ga0211732_1060426	Not Available	1895
3300020151|Ga0211736_10783561	Not Available	927
3300020205|Ga0211731_11673999	Not Available	824
3300020229|Ga0194042_1067930	Not Available	943
3300020561|Ga0207934_1007265	Not Available	1770
3300020561|Ga0207934_1067296	Not Available	597
3300020565|Ga0208718_1068237	Not Available	653
3300021079|Ga0194055_10191092	Not Available	824
3300021108|Ga0214162_1030683	Not Available	933
3300021516|Ga0194045_1039120	All Organisms → Viruses → Predicted Viral	1222
3300021516|Ga0194045_1062072	Not Available	943
3300023179|Ga0214923_10242669	Not Available	1022
3300024346|Ga0244775_10997186	Not Available	661
3300027518|Ga0208787_1116763	Not Available	627
3300027734|Ga0209087_1338113	Not Available	524
3300027746|Ga0209597_1149289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae → Francisella → unclassified Francisella → Francisella sp. LA112445	1000
3300027746|Ga0209597_1193804	Not Available	837
3300027759|Ga0209296_1161569	Not Available	996
3300027759|Ga0209296_1170767	Not Available	958
3300027760|Ga0209598_10112439	All Organisms → Viruses → Predicted Viral	1261
3300027763|Ga0209088_10190819	Not Available	882
3300027797|Ga0209107_10051494	All Organisms → Viruses → Predicted Viral	2319
3300027797|Ga0209107_10052905	All Organisms → Viruses → Predicted Viral	2283
3300027797|Ga0209107_10146779	All Organisms → Viruses → Predicted Viral	1210
3300027836|Ga0209230_10205301	Not Available	1133
3300027836|Ga0209230_10251701	Not Available	1018
3300027963|Ga0209400_1099699	Not Available	1355
3300027971|Ga0209401_1051711	Not Available	1859
3300027974|Ga0209299_1310288	Not Available	547
3300028178|Ga0265593_1021012	Not Available	2064
3300028178|Ga0265593_1070204	Not Available	969
3300031786|Ga0315908_11193044	Not Available	605
3300034050|Ga0335023_0209565	Not Available	1087
3300034050|Ga0335023_0624388	Not Available	545
3300034060|Ga0334983_0351023	Not Available	866
3300034060|Ga0334983_0570709	Not Available	622
3300034066|Ga0335019_0551175	Not Available	682
3300034095|Ga0335022_0213672	Not Available	1147
3300034095|Ga0335022_0318809	Not Available	873
3300034105|Ga0335035_0502445	Not Available	663
3300034107|Ga0335037_0535658	Not Available	624
3300034121|Ga0335058_0736978	Not Available	541
3300034167|Ga0335017_0175669	Not Available	1240
3300034283|Ga0335007_0219436	Not Available	1305

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.58%
Terrestrial	Environmental → Terrestrial	3.42%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	91.45%
Marine	Environmental → Aquatic → Marine	3.42%
Geologic	Environmental → Terrestrial → Geologic	2.56%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.71%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.85%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	75.21%
Lentic	Environmental → Aquatic → Freshwater → Lentic	14.53%
Mine	Environmental → Terrestrial → Geologic → Mine	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.71%
Coastal	Environmental → Aquatic → Marine → Coastal	1.71%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.85%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	74.36%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	6.84%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.27%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	3.42%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.85%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.85%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	42.73%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	23.93%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.27%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	3.42%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	3.42%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.42%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.56%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	2.56%
Mine Pit Pond	Environmental → Terrestrial → Geologic → Mine → Unclassified → Mine Pit Pond	2.56%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.71%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.71%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.71%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.85%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.85%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.85%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.85%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.85%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.85%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental
3300007860	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372A_3um	Environmental
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental
3300010885	northern Canada Lakes Co-assembly	Environmental
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental
3300011921	Mine pit pond microbial communities from Vermont, USA - 2M	Environmental
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental
3300020229	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-12m	Environmental
3300020561	Freshwater microbial communities from Lake Mendota, WI - 22APR2009 deep hole epilimnion (SPAdes)	Environmental
3300020565	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns (SPAdes)	Environmental
3300021079	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-9m	Environmental
3300021108	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental
3300021516	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L626-11m	Environmental
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental
3300024346	Whole water sample coassembly	Environmental
3300027518	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11 (SPAdes)	Environmental
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental
3300028178	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_36m	Environmental
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_101423742	3300000756	Freshwater And Sediment	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLMDLTINDDY*
B570J29032_1091705662	3300002408	Freshwater	MYIEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNKKGKITEVE*
B570J29032_1091876461	3300002408	Freshwater	ILKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLMDLTINDDY*
JGI24768J34885_100121813	3300002447	Freshwater And Sediment	LAILRKRKKKCLIIVKEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKLTDLTINDDY*
B570J40625_1002696443	3300002835	Freshwater	FIILKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLMDLTINDDY*
Ga0049083_100573532	3300005580	Freshwater Lentic	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY*
Ga0049084_100746652	3300005585	Freshwater Lentic	MYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKLTDLTINDDY*
Ga0049084_102699201	3300005585	Freshwater Lentic	KEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLTNLTINDEY*
Ga0102859_11441372	3300007708	Estuarine	VILRKIRKKKNKMFYYSKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENERVKLTELTINDDY*
Ga0105735_10643242	3300007860	Estuary Water	VILRKIRKKKNKMFYYSKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLMDLTINDDY*
Ga0114341_100755142	3300008108	Freshwater, Plankton	MYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMAVNMHIAQEKENEKVKLTDLTINDDY*
Ga0114973_102449052	3300009068	Freshwater Lake	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLTELTINDDY*
Ga0114973_102604752	3300009068	Freshwater Lake	ARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY*
Ga0114973_103145164	3300009068	Freshwater Lake	MLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY*
Ga0114962_102815392	3300009151	Freshwater Lake	MYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMAVNIHIAQEKENEKIKITDLTINDDY*
Ga0114962_104155802	3300009151	Freshwater Lake	MLLRQARVLYPELEEWLLEMAVNMHLAQEKENERVKLTELTINDDY*
Ga0114980_102690832	3300009152	Freshwater Lake	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENDKVKITDLTINDDY*
Ga0114963_100849802	3300009154	Freshwater Lake	MYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMAVNIHIAQEKENEKVKITDLTINDDY*
Ga0114968_102873852	3300009155	Freshwater Lake	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENERVKLTELTIDDDY*
Ga0114968_107494471	3300009155	Freshwater Lake	MYIEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNNKGKIT
Ga0114977_100991022	3300009158	Freshwater Lake	VILRRKIKNKMFYYSKEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY*
Ga0114978_108167832	3300009159	Freshwater Lake	MYIEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNNKSKITEE*
Ga0114981_101013582	3300009160	Freshwater Lake	VILRRKIKNKMFYYSKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY*
Ga0114981_103200601	3300009160	Freshwater Lake	RVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY*
Ga0114975_100490453	3300009164	Freshwater Lake	MYIEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNNKCKITEE*
Ga0114975_102586742	3300009164	Freshwater Lake	EDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLTNLTINDDY*
Ga0114975_103598652	3300009164	Freshwater Lake	LAILRKIKNKMFYYSKEKMYNEDDEGDDTLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEK
Ga0114975_106835861	3300009164	Freshwater Lake	VILRRKIKNKMFYYSKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKV
Ga0114979_100427683	3300009180	Freshwater Lake	VILRRKIKNKMFYYSKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENDKVKITDLTINDDY*
Ga0114969_100682732	3300009181	Freshwater Lake	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKLTKLTINDDY*
Ga0114969_102689411	3300009181	Freshwater Lake	KEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLMDLIINDDY*
Ga0114974_105682921	3300009183	Freshwater Lake	RKIKNKMFYYSKEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENDKVTITDLTINDDY*
Ga0114976_101634661	3300009184	Freshwater Lake	QARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY*
Ga0114976_103435161	3300009184	Freshwater Lake	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY*
Ga0114971_100787531	3300009185	Freshwater Lake	LAILRKKKNKMFDYSKEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVN
Ga0114971_101501872	3300009185	Freshwater Lake	LLRQARVLYPELEEWLLEMAVNMHIAQEKENERVKLTELTIDDDY*
Ga0114971_101702602	3300009185	Freshwater Lake	LLRQARVLYPELEEWLLEMAVNMHIAQEKENERVKLTELTINDDY*
Ga0114972_101731872	3300009187	Freshwater Lake	DEGDETLKKDMLLRQARVLYPELEEWLLEMAVVMHLAQEKENERVKITELTINDYY*
Ga0114972_104156831	3300009187	Freshwater Lake	ETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY*
Ga0114972_105325802	3300009187	Freshwater Lake	MYIEDDEGDDALKKDMLLRQSRILYPELEGWVLEMTVNLHIAQENFNNKGKITEIE*
Ga0114972_106176702	3300009187	Freshwater Lake	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNIHIAQEKENEKVKITDLTINDDY*
Ga0114972_106758232	3300009187	Freshwater Lake	FIILKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENERVKLTELTIDDDY*
Ga0114972_106794011	3300009187	Freshwater Lake	KIKCLIIVKEKMYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMAVNIHIAQEKENEKIKITDLTINDDY*
Ga0114960_100705073	3300010158	Freshwater Lake	MFDYSKEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLTELTINDDY*
Ga0114960_101464934	3300010158	Freshwater Lake	RQARVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY*
Ga0114967_100817643	3300010160	Freshwater Lake	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVVMHLAQEKENERVKITELTINDDY*
Ga0133913_115353022	3300010885	Freshwater Lake	MYLEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNNKCKITEE*
Ga0133913_116074233	3300010885	Freshwater Lake	MYIEDDEGDDALKKDMLLRQSRILYPELEGWVLEMVNLHIAQENFNN
Ga0133913_130409112	3300010885	Freshwater Lake	LEILRRKKKNKMFYYSKEKMYNEDDEGDETLKKDMLLRQARVLYHELEEWLLEMAVNMHLAQEKENEKVKITDLTINEDY*
Ga0133913_134851502	3300010885	Freshwater Lake	MYIEDDEGDDTLKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENYNKKVKET*
Ga0133913_135629302	3300010885	Freshwater Lake	LAILRKKKNKMFDYSKEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVVMHLAQEKENERVKITELTINDDY*
Ga0129318_101733322	3300011009	Freshwater To Marine Saline Gradient	MYSEDDEGDETLKKDMLLRQAKLLYPELEEWLLEMAVNIHIAQEKQSDIVKITDLTINDDY*
Ga0120089_1015952	3300011921	Mine Pit Pond	MYSEDDEGDETLKKDMLLRQAKVLYPELEEWLLEMAVNMHIAQEKENDKVKITDLTINDDY*
Ga0120089_1050293	3300011921	Mine Pit Pond	MYLEDDEGDDALKRDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNNKGKITEVE*
Ga0120089_1069342	3300011921	Mine Pit Pond	ETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY*
Ga0164293_103673282	3300013004	Freshwater	MYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY*
Ga0164293_105841151	3300013004	Freshwater	MYIEDDEGDDTLKKDMLLRQSRILYPELEGWLLEMVINLHITQENFNNKGKITEVE*
Ga0164294_100285025	3300013006	Freshwater	MYIEDDEGDDTLKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENYNKKVKETEDE*
Ga0164294_104030151	3300013006	Freshwater	DALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNKKGKITEVE*
Ga0164294_104674752	3300013006	Freshwater	MYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY*
Ga0164294_106111702	3300013006	Freshwater	MYSEDDEGDETLKKDMFLRQSRVLYPELEEWLLEMAVNIHIAQEKENEKVKITDLTINDDY*
Ga0164294_108569762	3300013006	Freshwater	MYIEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNNKGKITEVE*
Ga0164295_102552854	3300013014	Freshwater	ELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY*
Ga0164295_103338982	3300013014	Freshwater	LEILRRKKKNKMFYYSKEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY*
Ga0164295_104670763	3300013014	Freshwater	MYLEDDEGDDELKRDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNNKCKITEE*
Ga0164295_106331342	3300013014	Freshwater	MYLEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNKEKCKITEE*
Ga0164295_107980622	3300013014	Freshwater	MYIEDDEGDDTLKKDMLSRQSRILYPELEGWVLEMAVNLHIAQENFNNKGKITEVE*
Ga0164295_108089571	3300013014	Freshwater	LKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY*
Ga0207193_10387123	3300020048	Freshwater Lake Sediment	MYSEDDEGDETLKKDMLLRQAKVLYPELEEWLLEMAVNMHIAQEKENEKVKLTDLTINDD
Ga0211732_10604262	3300020141	Freshwater	MYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDD
Ga0211736_107835612	3300020151	Freshwater	MYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMAVNMHIAQEKENEKVKLTDLTINDD
Ga0211729_103179101	3300020172	Freshwater	RQSRVLYPELEEWLLEMAVNMHIAQEKQNDIVKITDLTINDDY
Ga0211731_116739992	3300020205	Freshwater	MYSEDDEGDDTLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDD
Ga0194042_10679301	3300020229	Anoxic Zone Freshwater	YNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLTELTINDDY
Ga0207934_10072652	3300020561	Freshwater	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKLMDLTINDD
Ga0207934_10672961	3300020561	Freshwater	MYIEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNKKGKITEVE
Ga0208718_10682372	3300020565	Freshwater	MFNYSKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLMDLTINDDY
Ga0194055_101910922	3300021079	Anoxic Zone Freshwater	MFDYSKEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLTELTINDDY
Ga0214162_10306832	3300021108	Freshwater	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKGNEKVKITGLTINDD
Ga0194045_10391202	3300021516	Anoxic Zone Freshwater	EDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENERVKLTELTIDDDY
Ga0194045_10620721	3300021516	Anoxic Zone Freshwater	GDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLTELTINDDY
Ga0214923_102426691	3300023179	Freshwater	MYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMAVNIHIAQEKENEKVKITDLTINDD
Ga0244775_109971862	3300024346	Estuarine	MYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKLTDLTINDD
Ga0208787_11167631	3300027518	Deep Subsurface	YSEDDEGDETLKKDMLLRQSRILYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY
Ga0209087_13381131	3300027734	Freshwater Lake	MYIEDDEEDETLKREMLLRQSKLLYPELESWLLEMAVNLHIAQENY
Ga0209597_11492893	3300027746	Freshwater Lake	MYIEDDEEDETLKREMLLRQSKLLYPELESWLLEMAVNLHIAQENYNKNTINFNKETEDE
Ga0209597_11938042	3300027746	Freshwater Lake	IKCLIIVKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENERVKLTELTINDDY
Ga0209296_11615692	3300027759	Freshwater Lake	MFYYSKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY
Ga0209296_11707671	3300027759	Freshwater Lake	MYIEDDEGDDTLKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENY
Ga0209598_101124392	3300027760	Freshwater Lake	MFDYSKEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY
Ga0209088_101908191	3300027763	Freshwater Lake	MFYYSKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENDKVKITDLTINDDY
Ga0209107_100514942	3300027797	Freshwater And Sediment	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLMDLTINDD
Ga0209107_100529052	3300027797	Freshwater And Sediment	MFNYSKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY
Ga0209107_101467792	3300027797	Freshwater And Sediment	MYLEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNKKGKITEVE
Ga0209230_102053012	3300027836	Freshwater And Sediment	MYIEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNNKGKITEVE
Ga0209230_102517011	3300027836	Freshwater And Sediment	KEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLTELTINDEY
Ga0209400_10996992	3300027963	Freshwater Lake	MFYYSKEKMYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENEKVKLTELTINDDY
Ga0209401_10517113	3300027971	Freshwater Lake	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENDKVKITDLTINDD
Ga0209299_13102881	3300027974	Freshwater Lake	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDD
Ga0265593_10210122	3300028178	Saline Water	MFYYSKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENERVKLTELTINDDY
Ga0265593_10702042	3300028178	Saline Water	LKEKMYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHLAQEKENERVKLTNLTINDDY
Ga0315908_111930442	3300031786	Freshwater	MFYYSKEKMYNEDDEGDETLKKDMLLRQAKVLYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDDY
Ga0315905_110577791	3300032092	Freshwater	KKDMLLRQSRVLYPELEEWLLEMAVNIHIAQEKENEKVKITDLTINDDY
Ga0334992_0333700_532_672	3300033992	Freshwater	MLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY
Ga0335023_0209565_191_376	3300034050	Freshwater	MYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMVVNMHIAQEKENEKVKITDLTINDD
Ga0335023_0624388_113_298	3300034050	Freshwater	MYSEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHISQEKENDKVKITDLTINDD
Ga0334983_0351023_482_652	3300034060	Freshwater	MYIEDDEGDDTLKKDMLLRQSRILYPELEGWVLEMAVNLHIDQENYNKKDKETEDE
Ga0334983_0570709_208_393	3300034060	Freshwater	MYNEDDEGDETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDD
Ga0335019_0551175_85_270	3300034066	Freshwater	MYSEDDEGDETLKKDMLLRQSRILYPDLEEWLLEMAVNMHIAQEKENEKVKITDLTINDD
Ga0335022_0212774_1_126	3300034095	Freshwater	MYIEDDEGDDALKKDMLLRQSRILYPELEGWVLEMAVNLHIA
Ga0335022_0213672_763_948	3300034095	Freshwater	MYSEDDEGDETLKKDMLLRQSRVLYPELEEWLLEMAVNMHLAQEKENEKVKITELTINDD
Ga0335022_0318809_698_871	3300034095	Freshwater	DDEGDETLKKDILLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY
Ga0335035_0502445_448_633	3300034105	Freshwater	MYSEDDEGDETLKKDMLLRQAKVLYPELEEWLLEMAVNMHLAQEKENEKVKLMDLTINDD
Ga0335037_0535658_372_557	3300034107	Freshwater	MYSEDDEGDETLKKDMLLRQSRILYPELEEWLLEMAVNMHLAQEKENEKVKITDLTINDD
Ga0335058_0736978_108_293	3300034121	Freshwater	MYSEDDEGDETLKKDMLLRQAKVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDD
Ga0335017_0175669_344_529	3300034167	Freshwater	MYSEDDEGDETLKKDMLLRQSRILYPELEEWLLEMAVNMHLAQEKENEKVKITELTINDD
Ga0335007_0219436_1015_1200	3300034283	Freshwater	MYSEDDEGDETLKKDMFLRQSRVLYPELEEWLLEMVVNLHITQEKENEKVKITDLTINDD