Metagenome Family F076826

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076826
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	57 residues
Representative Sequence	MRGAENVEPEMSFRRGYQQGAIEVFYAIERFLDPTTREVLRAWIEKDVFMWRAKA
Number of Associated Samples	72
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.39 %
% of genes near scaffold ends (potentially truncated)	92.31 %
% of genes from short scaffolds (< 2000 bps)	96.58 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.436 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.367 % of family members)
Environment Ontology (ENVO)	Unclassified (51.282 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.376 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.04% β-sheet: 0.00% Coil/Unstructured: 40.96%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF04392	ABC_sub_bind	2.56
PF06411	HdeA	2.56
PF13618	Gluconate_2-dh3	1.71
PF13531	SBP_bac_11	0.85
PF04311	DUF459	0.85
PF00239	Resolvase	0.85
PF08734	GYD	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.56
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.85
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.85
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	0.85
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	93.16 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	92.31 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	84.62 %
Unclassified	root	N/A	2.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	58.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	26.50 %
Unclassified	root	N/A	2.56 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	58.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	26.50 %
Unclassified	root	N/A	2.56 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1015016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1242	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10012871	Not Available	2304	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10024214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1657	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10054214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1037	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1011185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1713	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1016033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1424	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1016444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1406	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1024792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1122	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1041421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1045858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	786	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1069580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	621	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1093801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	526	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10017134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1747	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10038980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1092	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10051684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	917	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10059139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	843	Open in IMG/M
3300005332\|Ga0066388_102213830	All Organisms → cellular organisms → Bacteria → Proteobacteria	992	Open in IMG/M
3300005332\|Ga0066388_102279404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	979	Open in IMG/M
3300005332\|Ga0066388_105004665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	673	Open in IMG/M
3300005332\|Ga0066388_105184687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	661	Open in IMG/M
3300005332\|Ga0066388_106221302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	602	Open in IMG/M
3300005332\|Ga0066388_106788437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	576	Open in IMG/M
3300005332\|Ga0066388_107445268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	549	Open in IMG/M
3300005454\|Ga0066687_10528585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	699	Open in IMG/M
3300005468\|Ga0070707_101381804	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005713\|Ga0066905_100357521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1169	Open in IMG/M
3300005764\|Ga0066903_101556634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1251	Open in IMG/M
3300005764\|Ga0066903_103902948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	800	Open in IMG/M
3300005764\|Ga0066903_103979535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	792	Open in IMG/M
3300005764\|Ga0066903_106139585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	628	Open in IMG/M
3300005764\|Ga0066903_106839205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	592	Open in IMG/M
3300005764\|Ga0066903_107276976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	572	Open in IMG/M
3300005764\|Ga0066903_107700939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	554	Open in IMG/M
3300005764\|Ga0066903_107872074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	547	Open in IMG/M
3300005764\|Ga0066903_108076218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300009012\|Ga0066710_100478775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1872	Open in IMG/M
3300009100\|Ga0075418_11721263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	682	Open in IMG/M
3300009147\|Ga0114129_11496694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300009792\|Ga0126374_10504118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	873	Open in IMG/M
3300010043\|Ga0126380_10748347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	792	Open in IMG/M
3300010043\|Ga0126380_11479249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300010047\|Ga0126382_10829749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300010047\|Ga0126382_11121664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300010048\|Ga0126373_10591246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1161	Open in IMG/M
3300010048\|Ga0126373_10702411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1069	Open in IMG/M
3300010048\|Ga0126373_12393923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300010358\|Ga0126370_10418368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1107	Open in IMG/M
3300010358\|Ga0126370_12047803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300010359\|Ga0126376_10708016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300010359\|Ga0126376_10760033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	941	Open in IMG/M
3300010359\|Ga0126376_11193281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	775	Open in IMG/M
3300010359\|Ga0126376_11646524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	675	Open in IMG/M
3300010361\|Ga0126378_13054369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300010362\|Ga0126377_10598504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1147	Open in IMG/M
3300010362\|Ga0126377_11324773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300010398\|Ga0126383_10367410	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300010398\|Ga0126383_11459427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300010398\|Ga0126383_12007755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	666	Open in IMG/M
3300012189\|Ga0137388_11562239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300012201\|Ga0137365_11113609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	568	Open in IMG/M
3300012202\|Ga0137363_10412985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300012208\|Ga0137376_10493090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1063	Open in IMG/M
3300012208\|Ga0137376_11633199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	536	Open in IMG/M
3300012354\|Ga0137366_10605058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786	Open in IMG/M
3300012361\|Ga0137360_10431522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1114	Open in IMG/M
3300012948\|Ga0126375_10931699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	701	Open in IMG/M
3300012971\|Ga0126369_13504110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	514	Open in IMG/M
3300016319\|Ga0182033_12041347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	522	Open in IMG/M
3300016341\|Ga0182035_11824624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300016357\|Ga0182032_11596383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	567	Open in IMG/M
3300016371\|Ga0182034_11375531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	617	Open in IMG/M
3300016387\|Ga0182040_10251972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1327	Open in IMG/M
3300016387\|Ga0182040_11181935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	643	Open in IMG/M
3300016404\|Ga0182037_11382999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	622	Open in IMG/M
3300016422\|Ga0182039_11532429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	607	Open in IMG/M
3300016445\|Ga0182038_11277913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	656	Open in IMG/M
3300021560\|Ga0126371_13790809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	510	Open in IMG/M
3300027654\|Ga0209799_1066189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	811	Open in IMG/M
3300027909\|Ga0209382_10732793	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300031546\|Ga0318538_10133299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1304	Open in IMG/M
3300031679\|Ga0318561_10757825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	533	Open in IMG/M
3300031680\|Ga0318574_10786810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300031724\|Ga0318500_10094240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1353	Open in IMG/M
3300031736\|Ga0318501_10176328	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300031736\|Ga0318501_10565142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300031740\|Ga0307468_100977353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	742	Open in IMG/M
3300031744\|Ga0306918_10436569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1022	Open in IMG/M
3300031777\|Ga0318543_10115137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1164	Open in IMG/M
3300031777\|Ga0318543_10272334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	756	Open in IMG/M
3300031782\|Ga0318552_10190493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1036	Open in IMG/M
3300031794\|Ga0318503_10059047	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300031819\|Ga0318568_10190139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1264	Open in IMG/M
3300031821\|Ga0318567_10374361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	806	Open in IMG/M
3300031846\|Ga0318512_10619490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300031879\|Ga0306919_10730530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	762	Open in IMG/M
3300031890\|Ga0306925_10171724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2335	Open in IMG/M
3300031890\|Ga0306925_11681821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	613	Open in IMG/M
3300031893\|Ga0318536_10171096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1105	Open in IMG/M
3300031894\|Ga0318522_10078696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1202	Open in IMG/M
3300031910\|Ga0306923_11428156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	727	Open in IMG/M
3300031912\|Ga0306921_10621092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1248	Open in IMG/M
3300031941\|Ga0310912_10674400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	802	Open in IMG/M
3300031945\|Ga0310913_10697383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	718	Open in IMG/M
3300031946\|Ga0310910_10886364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	700	Open in IMG/M
3300031954\|Ga0306926_11066697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	957	Open in IMG/M
3300031954\|Ga0306926_11571688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	756	Open in IMG/M
3300031959\|Ga0318530_10067578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1377	Open in IMG/M
3300032025\|Ga0318507_10266842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300032039\|Ga0318559_10480879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300032051\|Ga0318532_10039322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1601	Open in IMG/M
3300032052\|Ga0318506_10415613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	596	Open in IMG/M
3300032059\|Ga0318533_10212900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1387	Open in IMG/M
3300032076\|Ga0306924_11773680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	644	Open in IMG/M
3300032091\|Ga0318577_10212586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	925	Open in IMG/M
3300032261\|Ga0306920_102876246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	653	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.44%
Host-Associated	Host-Associated	2.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.44%
Plants	Host-Associated → Plants	2.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.34%
Loam	Environmental → Terrestrial → Soil → Loam	17.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	13.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10150164	3300000580	Forest Soil	MEADMWGAENEGPEMSFRHGYQQGALEVFCAIERFLDPTTREVLQAWIEKDVSMWRAKAMLGHPPNWRLNMIA
AF_2010_repII_A1DRAFT_100128711	3300000597	Forest Soil	MEVEMEGAEHDDLEMSFRRGYQQGATEVFYAIERFLDPATREVVRAWIEKDVYTWRVKAMLG
AF_2010_repII_A1DRAFT_100242144	3300000597	Forest Soil	MRGAENDEPEMSFQRGYQQGAIELFYAIERFLDPATREVVRAWIEKDV
AF_2010_repII_A1DRAFT_100542143	3300000597	Forest Soil	MEVDMRGAESDEPEMSFRCGYQQGAIDVFYAVERFLGPATREVLQAWIERDVFMWRAKAM
AF_2010_repII_A100DRAFT_10111856	3300000655	Forest Soil	MWGAENEEPEMLFRHGYQQGAIEVFCAIERFLDPATREVLQAWIEKDVSMWR
AF_2010_repII_A100DRAFT_10160334	3300000655	Forest Soil	MRGAEDDEPEMSFRRGYQQGVIDIFCAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHP
AF_2010_repII_A100DRAFT_10164441	3300000655	Forest Soil	MEVDMEGAEHDDLEMSFRRGYQQGAIEVFYAIERFLDPAAREVVRAWIE
AF_2010_repII_A100DRAFT_10247925	3300000655	Forest Soil	MWGAENEEPEMSFRXGYQQGAIEVFCAIERFLDPATREVLQAWIEKDVSMWRAKAMLGHPPNWRLNMIAG
AF_2010_repII_A100DRAFT_10414211	3300000655	Forest Soil	MEVDMQGAEPDEPETSFRRGYQQGAIELFYAIERFLDPSTREVVRAW
AF_2010_repII_A100DRAFT_10458584	3300000655	Forest Soil	MWGAENEEPEMSFRHGYQQGAIEVFCAIERFLDPATREVLQAWIEKDVSMWRAKAMLGHPPNWRL
AF_2010_repII_A100DRAFT_10695801	3300000655	Forest Soil	MWAAENDEPEMSFRHGYQQGAIEVFCAIERFLDPTTREVLQAWIEKDVSMWRAKAMLGHPPNWRLNMIX
AF_2010_repII_A100DRAFT_10938011	3300000655	Forest Soil	MEGAEHDDLEMSFRRGYQQGAIEVFFAIERFLDPAAREVLQAWIEKDVYIWRVKAMLGRP
AF_2010_repII_A001DRAFT_100171341	3300000793	Forest Soil	MEGAEHDDLEMSFRRGYQQGAIEVFYAIERFLDPAAREVVRAWIEKDVYTWR
AF_2010_repII_A001DRAFT_100389804	3300000793	Forest Soil	MRGAENDEPEMSFQRGYQQGAIELFYAIERFLDPATREVVRAWIEKDVYIWRVKA
AF_2010_repII_A001DRAFT_100516844	3300000793	Forest Soil	MWGAENEEPEMLFRHGYQQGAIEVFCAIERFLDPATREVLQAWIEKDVSMW
AF_2010_repII_A001DRAFT_100591391	3300000793	Forest Soil	MRGAESDEPEMSFRCGYQQGAIDVFYAVERFLGPATREVLQAWIERDVFMWRAKAM
Ga0066388_1022138303	3300005332	Tropical Forest Soil	MRGAENVEPEMSFRRGYQQGAIDVFYAIERFLDPTTREVLQAWIEKDVFMWRAKAMLGHPPTW
Ga0066388_1022794043	3300005332	Tropical Forest Soil	MRGAENEEPEMSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHPPNWRLNMI
Ga0066388_1023894551	3300005332	Tropical Forest Soil	MRGAENDEPEMSFRLGYQQGAIEVFCAIERFLDPATRAVLQAWIEKDVFMWRVKAMSVIRQIGG*
Ga0066388_1050046652	3300005332	Tropical Forest Soil	MEVNMQGAEPDEPEMSFRQGYQQGAIELFYAIERFLDPATREVVRAWIEKDVYIWRVK
Ga0066388_1051846871	3300005332	Tropical Forest Soil	MWGAENEEPEMSFRHGYQKGAIEVFCAIERFLDPATREVLQAWIEKDVSMWRAKAMLG
Ga0066388_1062213023	3300005332	Tropical Forest Soil	MRGAENDEPEMSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHPPNWRL
Ga0066388_1067884371	3300005332	Tropical Forest Soil	MRGAENDEPEMSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHP
Ga0066388_1074452681	3300005332	Tropical Forest Soil	MRGAENDETEMSFRRGYQQGAIEVFYAIERFLDPATREILQAWIEKDVFM
Ga0066687_105285852	3300005454	Soil	MRGAENEESEMSFRRGYEQGVIDVFYAIERFLDPATREVLQAWIEKDVSIWRV
Ga0070707_1013818041	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LLKLKEMEVDMRGAGNDEPEMSFRRGYEQGAIDVFCAIERFLDPATREVLRAWIEKDVSIWR
Ga0066905_1003575212	3300005713	Tropical Forest Soil	MRGAENDEPEMSFRRGYQQGAIDTFLAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHPPNWRL
Ga0066903_1015566341	3300005764	Tropical Forest Soil	MRGAEDDEPEMSFRRGYQQGVIDIFYAIERFLDPTTREVLKAWIEKDVFIWRVKAM
Ga0066903_1039029482	3300005764	Tropical Forest Soil	LLKLKEMGVAMQGAEPDEPEMSFRRGYEQGAIELFYAIERFLDPATREVVRAWIEKDVYIWRVKAML
Ga0066903_1039795351	3300005764	Tropical Forest Soil	MRGAENDEAEMSFRRGYQQGAIDVFYAIERFLDPTTREVLKAWIEKDVFIWRVKAMLGHP
Ga0066903_1061395851	3300005764	Tropical Forest Soil	MWGAENEEPEMSFRHGYQQGAIEVFCAIARFLDPTTREVLQAWIEKDVSMWRAKAMLGHPPNWRLNMI
Ga0066903_1068392053	3300005764	Tropical Forest Soil	MWGVENEEPEMLFRHGYQQGAIEVFCAIERFLDPATREVLQAWIEKDVSMWRAKAMLGHP
Ga0066903_1072769762	3300005764	Tropical Forest Soil	KLKEMEVDMLGAENDEPEISFRRGYQQGAIDIFLAIERFLDPTTREVLPGLD*
Ga0066903_1077009391	3300005764	Tropical Forest Soil	LKEMEVDMRGAENDEPEMSFRLGYQQGAIEVFCAIERFLDPATRAVLQAWIEKDVFMWRVKAMSVIRQIGG*
Ga0066903_1078720741	3300005764	Tropical Forest Soil	MQGIEKDDAEMSFRRGYQQGVIEVFYALERFLDPATRDVLQSWIEKDIYVWRIKAMLGYPPIWRL
Ga0066903_1080762181	3300005764	Tropical Forest Soil	MQGAENDEPEMSFRRGYQQGAIDIFCAIERFLDPATREIVRAWI
Ga0066710_1004787751	3300009012	Grasslands Soil	LNQRLLRLKERGVDMRGAENEESEMSFRRRYEQGVIDVFYSIERFLDPATREVLQAWVEKDVSIWRVKAMLLHP
Ga0075418_117212631	3300009100	Populus Rhizosphere	MQGIENDDPETSFRRGYEHGAIETFHAIERFLDPATRDVLRAWIEKDVYVWRMEA
Ga0114129_114966943	3300009147	Populus Rhizosphere	MEVDMWGAENEEPEMSFRHGYQQGAIDVFYAIERFLDPATREVLQAWIE
Ga0126374_101910242	3300009792	Tropical Forest Soil	RLGYQQGAIEVFCAIERFLDPATRAVLQAWIEKDVFMWRVKAMSVIRQIGG*
Ga0126374_105041181	3300009792	Tropical Forest Soil	MEVDMRGAEDDEPEMSFRRGYQQGVIDIFCAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHPPNWR
Ga0126380_107483474	3300010043	Tropical Forest Soil	MEVDMWGAENEEPEMSFRHGYQQGAIEVFCAIEQFLDPATREVLQAWIEKDVSMWRAKAMLG
Ga0126380_114792492	3300010043	Tropical Forest Soil	MQGIVAEDPEMSYRRGYEHGAIETFQSVERFLDPATRQALRAWIEKDVYAWRMRAMLIYP
Ga0126382_108297491	3300010047	Tropical Forest Soil	MEVYMRGAENDEPEMSFRRGYQQGAIDTFLAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHP
Ga0126382_111216641	3300010047	Tropical Forest Soil	MLQWENFRVEAEMQGIEKDDPETSFRRGYEHGAIETFHAIERFLDPATRDVLRAWIEKDIYVWRMEAML
Ga0126373_105912462	3300010048	Tropical Forest Soil	MEGAEHDDLEMSFRRGYQQGATEVFDAIERFLDPATREVVRA*
Ga0126373_107024111	3300010048	Tropical Forest Soil	MEVDMWGAENDEPEMSFRHGYQQGAFEVFCAIERFLDPATREVLQAWIEKDVSMWRAKA
Ga0126373_123939231	3300010048	Tropical Forest Soil	MEVDMQGAELDQPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWIEKDV
Ga0126370_104183681	3300010358	Tropical Forest Soil	VASLRLLKLKEMEVDMEGAEHDDLEMSFRRGYQQGATEVFDAIERFLDPATREVVRA*
Ga0126370_120478031	3300010358	Tropical Forest Soil	LLKLKEMEVDMRGAESDEPEMSFRCGYQQGAIDVFYAVERFLGPATREVLQA
Ga0126376_107080163	3300010359	Tropical Forest Soil	MRGAENVGPEMSFRRGYQQGAIEVFYAIERFLDPTTREVLQAWIEKDVFMWRAKAMLGHPPTW
Ga0126376_107600331	3300010359	Tropical Forest Soil	MEVDMRGAEDDEPEMSFRRGYQQGVIDIFCAIERCLNPTTREVLQAWIEKDVSMWRAKAMLGHPPNWR
Ga0126376_111932811	3300010359	Tropical Forest Soil	MEVDMRGAENDEPEMSFRLGYQQGAIEVFCAIERFLDPATRAVLQAWIEKDVFMWRVKAMSVIRQIGG*
Ga0126376_116465241	3300010359	Tropical Forest Soil	MRGAEDDEPEMSFRRGYQQGAIEVFHAIERFLDPATREALQAWIE
Ga0126378_130543691	3300010361	Tropical Forest Soil	MRLMRSASLRLLKLKEIEVDMQGAEPDEPEMSFRRGYQQGATELFYAIERFLDPATREVVRAWIEKDVYIW
Ga0126377_105985042	3300010362	Tropical Forest Soil	MQGIEKDDPETAFRRGYEHGAIETFHAIERFLDPATRDVLRAWIEKDIYVWRM
Ga0126377_113247731	3300010362	Tropical Forest Soil	MNMLSLRLLKLNEKEVDMRGVENDEPEMSFRRGYQQGPIDVFYAIEQFLDPATR
Ga0126383_103674101	3300010398	Tropical Forest Soil	MQGIEKDDAEMSFRRGYQQGVIEVFYALERFLDPATRDVLQSWIEKDIYVWR
Ga0126383_114594271	3300010398	Tropical Forest Soil	MEVDMLGAENDEPEMSFRRGYQQGAIEAFYAIERFLDPATREVLQAWIEKDV
Ga0126383_120077551	3300010398	Tropical Forest Soil	MEVDMRGAEDDEPEMSFRRGYQQGVIDIFCAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHPPNWRLN
Ga0137388_115622392	3300012189	Vadose Zone Soil	MQGIEKDDAEMSFRRGYQQGGIEVFCALERLLDAATREVLEAWIEKDIYGWRMKAMLGYP
Ga0137365_111136092	3300012201	Vadose Zone Soil	LLKLKEMEVDMRGAENVEPEMSFRRGYQQGAIEVFCAIERFLDPATREVTAGEA*
Ga0137363_104129851	3300012202	Vadose Zone Soil	MQGIEKDDAEMSFRRGYQQGVIEVFCALERLLDPATREVLQAWIEKDIYVWRIKAM
Ga0137376_104930902	3300012208	Vadose Zone Soil	MRGAENEESEMSFRRGYEQGVIDVFYAIERFLDPATREVLQAWIEKDVSIWRVKAMLL
Ga0137376_116331992	3300012208	Vadose Zone Soil	MEVDMRGAENDESEMSFRRGYQQGAIEVFYAIERFLDPATREVLQAW
Ga0137366_106050581	3300012354	Vadose Zone Soil	LLKLKEMEVDMRGAENVEAEMSFRRGYQQGAIEVFCAIERFLDPATREVTAG*
Ga0137360_104315223	3300012361	Vadose Zone Soil	MQGIEKDDAEMSFRRGYQQGVIEVFCALERLLDPATREVLQAWIEKDI
Ga0126375_109316991	3300012948	Tropical Forest Soil	MPEPVEKESPEMMFRRGYEHGVIDTFRAIERFLDPATRDVLRAWI
Ga0126369_135041102	3300012971	Tropical Forest Soil	MRLLLASLRLLKLKEMEVDMRGAENDEPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWIE
Ga0182033_120413471	3300016319	Soil	MWGAENEEPEMSFRHGYQQGAIEVFCAIERFLDPATREVLQAWIEKDVSMWRAKAMLGHPPNWRLNM
Ga0182035_118246241	3300016341	Soil	MRGAENDEPETSFRRGYQQGAIELFYAIERFLDPATREVLRA
Ga0182032_115963831	3300016357	Soil	LLKLKKMEVDMRGADNDDPARSFQRGYQQGAIDLFLAIERCLDPTTREVLQAWI
Ga0182034_113755312	3300016371	Soil	MRGAENEEPEMSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSMWR
Ga0182040_102519721	3300016387	Soil	MWGAENEEPEMSFRHGYQQGAIEVFCAIERFLDPATREVLQAWIEKDV
Ga0182040_111819351	3300016387	Soil	LLKLKEMEVDMRGAENDEPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWIEKDVYIWRVKAM
Ga0182037_113829992	3300016404	Soil	LLKLKEMEVEMWGAKNEEPEMSFRHGYQQGAIEVFCAIERFLDPATREVLQAWIE
Ga0182039_115324291	3300016422	Soil	LLKLKEMEVDMRGAENDEPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWI
Ga0182038_112779132	3300016445	Soil	MRGAENDEPETSFQRGYQQGAIDLFLAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHP
Ga0126371_137908091	3300021560	Tropical Forest Soil	MPEPVEKESPEMMFRRGYEHGVIDTFRAIERFLDPATRDVLRAWIEKDVYI
Ga0209799_10661892	3300027654	Tropical Forest Soil	LLKLKEMEVDMRGAENDEPEMSFRRGYQQGVIEVFDAIERFLDPTTRGVLQAWIEKDVFMWR
Ga0209382_107327931	3300027909	Populus Rhizosphere	MQGIEQDDPETSFRRGYEHGAIETFHAIERFLDPATRDLLRAWIEKD
Ga0318538_101332994	3300031546	Soil	VASLRLLKLKEMEVDMQGAEPDEPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWIEKD
Ga0318561_107578251	3300031679	Soil	MLGAENDEPETSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVS
Ga0318574_107868101	3300031680	Soil	LLKLKEMEVDMWGAENEEPEMSFRHGYQQGAIEVFYAIERFLDPATREVLQAWIEKD
Ga0318500_100942401	3300031724	Soil	MQGAEPDDPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWFEKDVY
Ga0318501_101763283	3300031736	Soil	MEVDMWGAENDEPETSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSM
Ga0318501_105651423	3300031736	Soil	LLKLKEMEVDLQGAEPDEPEMSFRRGYQQGTIELFYAIERFLDPATREVVRAW
Ga0307468_1009773532	3300031740	Hardwood Forest Soil	MQGIVQEDPEMSFRRGYEHGAIETFQSIQRFLDPRTREVLRAWIEKDC
Ga0306918_104365691	3300031744	Soil	LLKLKEMEVDMQGAENDEPEMSFRRGYQQGVIDVFYAVERVLDPATREILRAWIEKDVYIWRVKAMLG
Ga0318543_101151372	3300031777	Soil	MQGAEPDEPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWIEKDVYIWR
Ga0318543_102723341	3300031777	Soil	MWGAENGEPEMSFRRGYQQGAIDIFLAIERCLDPITREVLQAWIEKDVSMWRAKAMLGHPPNW
Ga0318552_101904933	3300031782	Soil	LLKLKEMEVDMRGAENDEPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWIEKDVYIWRVK
Ga0318503_100590473	3300031794	Soil	MLGAENDEPETSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHP
Ga0318568_101901391	3300031819	Soil	MQGAEPDEPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWIEKEVYIWRVKAMLG
Ga0318567_103743611	3300031821	Soil	MWGAENGEPEMSFRRGYQQGAIDIFLAIERCLDPITREVLQAWI
Ga0318512_106194901	3300031846	Soil	MRRPRYRLLKLNEMEVDMQGAEHDEPEMSFRRGYQQGAIDIFCAIERFLDPATREVVRAWIEKDV
Ga0306919_107305303	3300031879	Soil	MRGAENEEPEMSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSMW
Ga0306925_101717241	3300031890	Soil	MLGAENDEPETSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSMWRAKAML
Ga0306925_116818212	3300031890	Soil	MRGAENEEPEMSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSM
Ga0318536_101710963	3300031893	Soil	MLGAENDEPETSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKD
Ga0318522_100786963	3300031894	Soil	MQGIEKDDAEMSFRRGYQQGVIEVFYALERSLDPATRDVLQAWIEKDIYVWRIKAMLGYPPVW
Ga0306923_114281561	3300031910	Soil	MQGAEHDEPEMSFRRGYQQGAIDIVCAIERFLDPATREVVRAWIEKDVYIWRVKAMLGHPPNWRLN
Ga0306921_106210922	3300031912	Soil	MEVDMQGAENDEPEMSFRRGYQQGVIDVFYAVERVLDPATREILRAWIEKDVYIWRVKAMLGHPPN
Ga0310912_106744003	3300031941	Soil	MQGAEPDEPEMSFRRGYQQGATELFYAIERFLDPATREVVRAWIEKDVYIWRVKAMLG
Ga0310913_106973832	3300031945	Soil	LLKLKEMEVDMHGAEHDELEMSFRRGYQQGAIEVFFAIERFLDPATREVLQA
Ga0310910_108863643	3300031946	Soil	MRGAENEEPEMSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSMWRAKAMLSHPPIAGP
Ga0306926_110666971	3300031954	Soil	MQGAEPDEPEMSFRRGYQQGAIDVFHAIERFLDPATREVVRAWIEKDVYIWRVKAMLGHPPNWR
Ga0306926_115716881	3300031954	Soil	MWGAENDEPETSFRRGYQQGAIDIFLAIERCLDPTTREVLQAWIEKDVSMWRAKAMLGHPPNWRLNMIAGP
Ga0318530_100675781	3300031959	Soil	MWGAENEEPEMSFRHGYQQGAIEVFYAIERFLDPATREVLQAWIEKDVY
Ga0318507_102668423	3300032025	Soil	MSGAENEEPEMSFRHGYQQGAIELFYAIERFLDPATREVVRAWIEKDVY
Ga0318559_104808793	3300032039	Soil	MRRPRYRLLKLNEMEVDMQGAEHDEPEMSFRRGYQQGAIDIFCAIERFLDPATREVVRAWIEKDVY
Ga0318532_100393221	3300032051	Soil	MEVDMQGAEPDEPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWI
Ga0318506_104156132	3300032052	Soil	MWGAENEEPEMSFRHGYQQGAIEVFCAIERFLDPATREVLQAWIEKDVSMWRAKAMLGHPPNWR
Ga0318533_102129005	3300032059	Soil	MQGIEKDDAEMSFRRGYQEGVIEVFYALERSLDPATRDVLRAWIEEDI
Ga0306924_117736801	3300032076	Soil	MRGAENVEPEMSFRRGYQQGAIEVFYAIERFLDPTTREVLRAWIEKDVFMWRAKA
Ga0318577_102125861	3300032091	Soil	LLKLKEMEVDMRGAENDEPEMSFRRGYQQGAIELFYAIERFLDPATREVVRAWIEKD
Ga0306920_1028762461	3300032261	Soil	MRGAENDEPEMSFRLGYQQGAIEVFCAIERFLDPATRAVLQAWIEKDVFMWRVKAMSVIRQIGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076826

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences