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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F076800 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 117 |
| Average Sequence Length | 99 residues |
| Representative Sequence | NFGDASKHGSGGDELLDDQVIEEVMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Number of Associated Samples | 105 |
| Number of Associated Scaffolds | 117 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 1.71 % |
| % of genes near scaffold ends (potentially truncated) | 97.44 % |
| % of genes from short scaffolds (< 2000 bps) | 94.87 % |
| Associated GOLD sequencing projects | 99 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.77 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (90.598 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.111 % of family members) |
| Environment Ontology (ENVO) | Unclassified (33.333 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (42.735 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 28.46% β-sheet: 19.23% Coil/Unstructured: 52.31% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.77 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| d.212.1.1: TolA | d1lr0a1 | 1lr0 | 0.55775 |
| d.181.1.1: Insert subdomain of RNA polymerase alpha subunit | d4c2mc2 | 4c2m | 0.55552 |
| d.142.1.6: Eukaryotic glutathione synthetase ATP-binding domain | d1m0wa2 | 1m0w | 0.54314 |
| d.181.1.1: Insert subdomain of RNA polymerase alpha subunit | d1twfc2 | 1twf | 0.54044 |
| c.55.3.17: Ribonuclease H-like domain of RAG1 | d4wwxb2 | 4wwx | 0.52808 |
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| Pfam ID | Name | % Frequency in 117 Family Scaffolds |
|---|---|---|
| PF13646 | HEAT_2 | 14.53 |
| PF01557 | FAA_hydrolase | 0.85 |
| PF12094 | DUF3570 | 0.85 |
| PF00871 | Acetate_kinase | 0.85 |
| PF01728 | FtsJ | 0.85 |
| PF00809 | Pterin_bind | 0.85 |
| PF00920 | ILVD_EDD | 0.85 |
| PF02780 | Transketolase_C | 0.85 |
| PF13380 | CoA_binding_2 | 0.85 |
| COG ID | Name | Functional Category | % Frequency in 117 Family Scaffolds |
|---|---|---|---|
| COG0129 | Dihydroxyacid dehydratase/phosphogluconate dehydratase | Carbohydrate transport and metabolism [G] | 1.71 |
| COG0282 | Acetate kinase | Energy production and conversion [C] | 0.85 |
| COG0293 | 23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ | Translation, ribosomal structure and biogenesis [J] | 0.85 |
| COG1189 | Predicted rRNA methylase YqxC, contains S4 and FtsJ domains | Translation, ribosomal structure and biogenesis [J] | 0.85 |
| COG3426 | Butyrate kinase | Energy production and conversion [C] | 0.85 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 90.60 % |
| All Organisms | root | All Organisms | 9.40 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 11.11% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 9.40% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 6.84% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 5.13% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.13% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 5.13% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 2.56% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 2.56% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.56% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.56% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.56% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.56% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.56% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.71% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.71% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.71% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.71% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.71% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.71% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.71% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 1.71% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 1.71% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 1.71% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 1.71% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 0.85% |
| Freshwater | Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater | 0.85% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.85% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.85% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.85% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.85% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.85% |
| Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 0.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.85% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.85% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.85% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.85% |
| Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 0.85% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.85% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.85% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.85% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.85% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.85% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.85% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.85% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.85% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.85% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000363 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300004081 | Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2) | Environmental | Open in IMG/M |
| 3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
| 3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
| 3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005165 | Soil and rhizosphere microbial communities from Laval, Canada - mgHMC | Environmental | Open in IMG/M |
| 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
| 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
| 3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
| 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
| 3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300011435 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2 | Environmental | Open in IMG/M |
| 3300012041 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2 | Environmental | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012898 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1 | Environmental | Open in IMG/M |
| 3300012907 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1 | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
| 3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
| 3300015242 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
| 3300020000 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1 | Environmental | Open in IMG/M |
| 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300021404 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O | Environmental | Open in IMG/M |
| 3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
| 3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
| 3300022713 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300023263 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6 | Environmental | Open in IMG/M |
| 3300024245 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18 | Environmental | Open in IMG/M |
| 3300024275 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15 | Environmental | Open in IMG/M |
| 3300024317 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01 | Environmental | Open in IMG/M |
| 3300025504 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025954 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1 (SPAdes) | Environmental | Open in IMG/M |
| 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027855 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027869 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027878 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes) | Environmental | Open in IMG/M |
| 3300027886 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes) | Environmental | Open in IMG/M |
| 3300028072 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16 | Environmental | Open in IMG/M |
| 3300028889 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2 | Environmental | Open in IMG/M |
| 3300029923 | II_Fen_E1 coassembly | Environmental | Open in IMG/M |
| 3300030019 | II_Fen_E2 coassembly | Environmental | Open in IMG/M |
| 3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031124 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_140 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Host-Associated | Open in IMG/M |
| 3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031748 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22 | Environmental | Open in IMG/M |
| 3300031768 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22 | Environmental | Open in IMG/M |
| 3300031847 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4 | Environmental | Open in IMG/M |
| 3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
| 3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
| 3300031939 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2 | Environmental | Open in IMG/M |
| 3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
| 3300031943 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2 | Environmental | Open in IMG/M |
| 3300032060 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18 | Environmental | Open in IMG/M |
| 3300032163 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
| 3300032829 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3 | Environmental | Open in IMG/M |
| 3300033004 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4 | Environmental | Open in IMG/M |
| 3300034666 | Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| ICChiseqgaiiDRAFT_19913911 | 3300000033 | Soil | KGGGSMAGDGDFSNDANFGDASKHGSGGDEMLDDQVIEEVMMKHYRGLVPCLMQERHXXPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSM |
| ICChiseqgaiiFebDRAFT_138417791 | 3300000363 | Soil | KGGGSMAGDGDFSNDANFGDASKHGSGGDEMLDDQVIEEVMMKHYRGLVPCLMQERHXXPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0063454_1020385832 | 3300004081 | Soil | FSNDANFGDASKHGSGGDEMLDDAVIEETMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0062589_1024333761 | 3300004156 | Soil | VAGDGDFSNDANFGDASKHSSGGDELLDDQVIEEVMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0062591_1015558522 | 3300004643 | Soil | DGDFSNDANFGDASKHSSGGDELLDDQVIEEVMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0058859_117176912 | 3300004798 | Host-Associated | MMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0062594_1012067041 | 3300005093 | Soil | ANFGDASKHSSGGDETLDDQVIEEVMSKHFRGLVPCLMHSGAGEMSVDFVIRGTGKVSAVKVNGQKTGSFPQCVLQRMPMFPKFNGTKTIASWSMSIRR* |
| Ga0066869_100683241 | 3300005165 | Soil | QVIEETMMKHYRGLVPCLMQERHKSPGVNEMSVDFVVRGTGKVSAVKVNGQKSGSFANCVLGRMPTFPKYNGNKTIASWSMSMK* |
| Ga0070670_1016416532 | 3300005331 | Switchgrass Rhizosphere | DGDFSNDANFGDASKHGSGGDELLDDQVIEEVMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0066388_1029176973 | 3300005332 | Tropical Forest Soil | GDGDFSNDMNFGDASKHGAGGDETLDDQVIEEVMSRHYRGLIPCLMHSGAGEMSVDFVIRGTGKVSAVKVNGQKTGSFPQCVLARMPMFPKFNGSKTIASWSMSIRR* |
| Ga0070666_105737143 | 3300005335 | Switchgrass Rhizosphere | VMSKHFRGLVPCLMHSGAGEMSVDFVIRGTGKVSAVKVNGQKTGSFPQCVLQRMPMFPKFNGTKTIASWSMSIRR* |
| Ga0070680_1011374232 | 3300005336 | Corn Rhizosphere | AGDGDFSNDANFGDASKHGSGGDETLDDQIIEEVMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0068868_1003420551 | 3300005338 | Miscanthus Rhizosphere | NFGDASKHGSGGDELLDDAVIEETMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0070661_1013050341 | 3300005344 | Corn Rhizosphere | SKHGSGGDETLDDQVIEETMSRHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0070673_1005070373 | 3300005364 | Switchgrass Rhizosphere | QVIEEVMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0070667_1001494451 | 3300005367 | Switchgrass Rhizosphere | EVMSKHFRGLVPCLMHSGAGEMSVDFVIRGTGKVSAVKVNGQKTGSFPQCVLQRMPMFPKFNGTKTIASWSMSIRR* |
| Ga0070713_1023764101 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | ASAGADSEFNNDANFGDASKYGQVTGDETLDDGTIEDTMMHHYRGLVPCLMAERKHNPGLTQMSLDFVVRGNGKVSAVKVNGQKGSFAGCVLGRMPTFPKFNGTKTIASWSMSMR* |
| Ga0070711_1001470981 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | EFNNDANFGDASKYGQVTGDETLDDGTIEDTMMHHYRGLVPCLMAERKHNPGLTQMSLDFVVRGNGKVSAVKVNGQKGSFAGCVLGRMPTFPKFNGTKTIASWSMSMR* |
| Ga0070679_1006241662 | 3300005530 | Corn Rhizosphere | IQKVMMGNYRSLVPCIMAEKRKEPGLSDIALDFVVRGTGKVSAVKVNGQRGGPFAGCVLGRMQSFGFPKFNGNKTVASWSMSMR* |
| Ga0070684_1022708091 | 3300005535 | Corn Rhizosphere | NFGDASKHGSGGDELLDDQVIEEVMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0070686_1000045161 | 3300005544 | Switchgrass Rhizosphere | GGDETLDDQVIEEVMSKHFRGLVPCLMHSGAGEMSVDFVIRGTGKVSAVKVNGQKTGSFPQCVLQRMPMFPKFNGTKTIASWSMSIRR* |
| Ga0068857_1023030732 | 3300005577 | Corn Rhizosphere | MMANYRKLIPCIVHSPGVNNIALEFAVRGNGKVSAVKVNGQRTGALPACMLGRMQSFNFPKFNGSKTIASWSMSMGR* |
| Ga0070762_102364431 | 3300005602 | Soil | RGLVPCLMSERKHNPGLSEMSLDFVVRGSGKVSAVKVNGQKGAFASCILSRMPMFPRFNGSKTIASWSMSMR* |
| Ga0068856_1001433531 | 3300005614 | Corn Rhizosphere | GDETLDGDVIEATMMHHYRGLVPCLMAERKHSPGLSEMSLEFVIRGTGKVSAVKVNGQRGGFASCVQGRMPTFPKFNGSKTIATWSMSMR* |
| Ga0068864_1001851061 | 3300005618 | Switchgrass Rhizosphere | HYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKSGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0068866_107638452 | 3300005718 | Miscanthus Rhizosphere | DGDFSNDANFGDASKHGSGGDETLDDQIIEETMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0066903_1089771612 | 3300005764 | Tropical Forest Soil | NYRSLVPCIMAEKRKEPGLSDIALDFVVRGTGKVSAVKVNGQRGGPFASCLLGRMQSFGFPKFNGSKTIASWSMSMR* |
| Ga0066709_1028550451 | 3300009137 | Grasslands Soil | YRGLVPCLMAERKHNPGLTEMSLEFVVRGTGKVSAVKVNGQRGGFASCVQSRMPTFPKFNGSKTIASWSMSLR* |
| Ga0099792_109215011 | 3300009143 | Vadose Zone Soil | EETMMHHYRGLVPCLMNERKHNPGLSEMSLDFVVRGSGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSLR* |
| Ga0105242_125157011 | 3300009176 | Miscanthus Rhizosphere | NDAEFNNDANFGDASKYASGDDDVLDDGVVSDVMGNHYRGLIPCLMQERKKNPGVSEMAVDFVIRGTGKVSAVKVNGQRGGAFASCVLGRMPTFPKFNGNKTIASWSMSMR* |
| Ga0105248_106020241 | 3300009177 | Switchgrass Rhizosphere | VKLSFQKASTVKHDGGHRSGDGSVAGDGDFSNDANFGDASKHGSGGDELLDDAVIEETMMKHYRSLVPCLMQERHKSPGVSEMSVDFVVRGTGKVSAVKVNGQKAGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0105238_106858903 | 3300009551 | Corn Rhizosphere | AGDETLDDGVIEETMMHHYRGLVPCLMSERKHNPGLSEMSLEFVVRGNGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR* |
| Ga0105238_124313562 | 3300009551 | Corn Rhizosphere | GSGGDEMLDDAVIEETMMKHYRGLVPCLMAERKHNPGLTQMSLDFVVRGNGKVSAVKVNGQKGSFASCVLGRMPTFPKFNGTKTIASWSMAMR* |
| Ga0134125_114647891 | 3300010371 | Terrestrial Soil | AGGDETLDDGVIEETMLHHYRALVPCLMAERKHNPGMTEMSLDFVVRGTGKVSAVKVNGQKGGFASCVLGRMPMFPKFNGSKTIASWSMSMR* |
| Ga0134127_129522221 | 3300010399 | Terrestrial Soil | EEVMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0137426_10714743 | 3300011435 | Soil | GDGDFSNDANFGDASKHGSGGDETLDDQIIEETMMKHYRGLVPCLMQERHRSPGVSEMTVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0137426_12795171 | 3300011435 | Soil | SGGATAGDGDFSNDANFGDASKHGSGGDETLDDQIIEETMMKHYRGLVPCLMQERHRSPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0137430_10722351 | 3300012041 | Soil | HRSGNSTAGDGDFSNDANFGDASKHGSGGDETLDDQIIEETMMKHYRGLVPCLMQERHRSPSVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0150984_1008305482 | 3300012469 | Avena Fatua Rhizosphere | VIQKVMMGNYRSLVPCLMAEKHKNPALAEMNIDFVVRGSGKVSAVKVNGQRGGAFPGCVLGRMQSFNFPHFNGSKTIASWSMSLR* |
| Ga0150984_1155896221 | 3300012469 | Avena Fatua Rhizosphere | VAKRGGGGHHASAGNAANDAEFNNDANFGDASKYASGGDDVLDDGVVSDVMGSHYRGLIPCLMQERHRNASVSEMSLDFVIRGTGKVSAVKVNGQRSGAFAGCVLGRMPTFPKFNGSKTIASWSMSMR* |
| Ga0157293_102454512 | 3300012898 | Soil | SNDANFGDASKHGSGGDELLDDQVIEEVMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0157283_104132971 | 3300012907 | Soil | GGGSVAGDGDFSNDANFGDASKHGSGGDDILDGDVIEETMMKHYRSLVPCLMQERKRNAGISEMSLDFVVRGTGKVSAVKVNGQKGGPFASCVLGRMPTFPKFNGNKTIASWSMSMR* |
| Ga0164300_104113973 | 3300012951 | Soil | VIEETMMKHYRGLVPCLMQERKRNAGVSEMSLDFVVRGTGKVSAVKVNGQKSGSFANCVLGRMPTFPKYNGNKTIASWSMSMK* |
| Ga0164301_111626511 | 3300012960 | Soil | DELLDDQIIEETMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKFNGNKTIASWSMAIR* |
| Ga0164302_109794632 | 3300012961 | Soil | VSDVMGNHYRGLVPCLMQERKKNPGVSELAVDFVIRGTGKVSAVKVNGQRGGAFASCVLGRMPTFPKFNGNKTIASWSMSMR* |
| Ga0164308_119443281 | 3300012985 | Soil | AGDEVLDDVVVEETMRNHYRGLVPCLMQERHKNPSVSEMSVDFVIRGTGKVSAVKVNGQKGGSFAGCVLGRMPTFPKFNGSKTIASWSMSVR* |
| Ga0157371_108447371 | 3300013102 | Corn Rhizosphere | ETMMKHYRGLVPCLMQERHKNPGVNEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0157375_120841701 | 3300013308 | Miscanthus Rhizosphere | NNDSNFGDASKYASAGDETLDDGVIEETMMHHYRGLVPCLMSERKHNPGLSEMSLEFVVRGTGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR* |
| Ga0163163_131127581 | 3300014325 | Switchgrass Rhizosphere | VSAKVTKRGGGAHHASAGNAANDAEFNNDANFGDASKYASGGDDVLDDGVVGEVMGSHYRGLIPCLMQERHRNPSVSEMSLDFVIRGTGKVSAVKVNGQRSGAFASCVLGRMPTFPKFNGNKTIASWSMSLR* |
| Ga0163163_132186101 | 3300014325 | Switchgrass Rhizosphere | SDFSNDSNFGDASKYANAGDEILDDVTVEETMRNHYRGLVPCLMQERRRNASVSEMRVDFVIRGNGRVDRVKVNDQKSGPFAQCVLAHMPAFPKFNGVKTIASWSMSMR* |
| Ga0157380_133814811 | 3300014326 | Switchgrass Rhizosphere | TIQTVMMGNYRKLVPCLMDEKRRSPGLKDLDLEFIVGGNGKVSAVKVNGQLQGPFPGCVLNRMQSFNFPKYNGSRTIASWSMSLR* |
| Ga0173483_104166533 | 3300015077 | Soil | MMKHYRSLVPCLMQERKRNAGISEMSLDFVVRGTGKVSAVKVNGQKGGPFASCVLGRMPTFPKFNGNKTIASWSMSMR* |
| Ga0173480_107036621 | 3300015200 | Soil | HASGGAANDAEFNNDANFGDASKYASGGDDVLDDGVVSDVMGNHYRGLIPCLMQERKKNPSVSEMAVDFVIRGTGKVSAVKVNGQRGGAFASCVLGRMPTFPKFNGNKTIASWSMSMR* |
| Ga0137412_109968582 | 3300015242 | Vadose Zone Soil | GNYRSLVPCIMQERHKTPGLSDIALDFVVRGTGKVSAVKVNGQHGGPFAGCVLGRMQSFGFPKFNGSKTIASWSMQMR* |
| Ga0132258_117019421 | 3300015371 | Arabidopsis Rhizosphere | QIIEETMMKHYRGLVPCLMQERHRSPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0132257_1004055583 | 3300015373 | Arabidopsis Rhizosphere | GSVAGDGDFSNDANFGDASKHSSGGDELLDDQVIEEVMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0132257_1021477751 | 3300015373 | Arabidopsis Rhizosphere | AFLKDVKLSFQKVSTVKRGSGHHGGGSTAADGEFSNDANFGDASKHSSGGDETLDDQGIEEVMSKHFRGLVPCLMHSGAGEMSVDFVIRGTGKVSAVKVNGQKTGSFPQCVLQRMPMFPKFNGTKTIASWSMSIRR* |
| Ga0132257_1030301661 | 3300015373 | Arabidopsis Rhizosphere | RSLVPCLMQERHRSPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0132257_1046081482 | 3300015373 | Arabidopsis Rhizosphere | GGDETLDDGVIEETMMKHYRGLVPCLMQERKRNAGVSEMSLDFVVRGTGKVSAVKVNGQKGGSFASCVLGRMPTFPKFNGNKTIASWSMSMR* |
| Ga0132255_1046215081 | 3300015374 | Arabidopsis Rhizosphere | DDEVIEVTLMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR* |
| Ga0184625_101241783 | 3300018081 | Groundwater Sediment | VIEETMMKHYRSLVPCLMQERKRNAGVSEMSLDFVVRGTGKVSAVKVNNQKSGPFASCVLSRMPTFPKYNGNKTIASWSMSMR |
| Ga0190270_105146653 | 3300018469 | Soil | MKHYRSLVPCLMQERHRSPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0066669_102683211 | 3300018482 | Grasslands Soil | ELLDDAVIEETMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGAFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0193692_10030036 | 3300020000 | Soil | GVIQKVMMGNYRSLVPCILQERHHSAGLSDVNIDFVVRGSGKVSAVKVNGQRGGPFAGCVLSRMQGFGFPKFNGSKTIASWSMSMR |
| Ga0206356_100119971 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | FQKAHVAKRGSGHHAGNSKDDAEFSNDANFGDATKYSAGGDETLDDGVIEETMLHHYRALVPCLMAERKHNPGMTEMSLDFVVRGTGKVSAVKVNGQKGGFASCVLGRMPTFPKFNGSKTIASWSMSMR |
| Ga0210389_101029821 | 3300021404 | Soil | GKADDAEFSNDSNFGDASKYASAGDETLDDGVIEETMMHHYRGLVPCLMSERKHNPGLSEMSLDFVVRGNGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0210390_114022081 | 3300021474 | Soil | MMGHYRGLVPCLMSERKHNPGLNEMSLDFVVRGNGKVSAVKVNGQKGSFASCILSRMPTFPKFNGSKTIASWSMSMR |
| Ga0210402_118737942 | 3300021478 | Soil | GDASKYASAGDETLDDGVIEETMMHHYRGLVPCLMSERKHNPGLSEMSLDFVVRGNGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0242677_10907451 | 3300022713 | Soil | AKRGSGGHHAGGGSKADDAEFNNDSNFGDASKYASAGDETLDDGVIEETMMHHYRGLVPCLMSERKHNPGLSEMSLDFVVRGNGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0222622_105783611 | 3300022756 | Groundwater Sediment | GEDDILDGDVIEETMMKHYRSLVPCLMQERKRNAGISEMSLDFVVRGTGKVSAVKVNGQKGGPFASCVLGRMPTFPKFNGNKTIASWSMSMR |
| Ga0222622_107801311 | 3300022756 | Groundwater Sediment | ETMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKSGSFANCVLGRMPTFPKYNGNKTIASWSMSMK |
| Ga0222622_108623392 | 3300022756 | Groundwater Sediment | NDANFGDASKHGSGGDEMLDDQVIEETMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0247800_11001781 | 3300023263 | Soil | GGSVAGDGDFSNDANFGDASKHGSGGDELLDDAVIEETMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKAGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0247677_10434851 | 3300024245 | Soil | DGDFSNDANFGDASKHSTGGDELLDDQVIEEVMMKHYRGLVPCLMQERHKNPGVTEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMK |
| Ga0247674_10474252 | 3300024275 | Soil | FSNDANFGDASKHSTGGDELLDDQVIEEVMMKHYRGLVPCLMQERHKNPGVTEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMK |
| Ga0247660_10034771 | 3300024317 | Soil | VAGDGDFSNDANFGDASKHSTGGDELLDDQVIEEVMMKHYRGLVPCLMQERHKNPGVTEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMK |
| Ga0208356_10346061 | 3300025504 | Arctic Peat Soil | TMMHHYRGLVPCLMSERKHNPGLSEMSLDFVVRGNGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0207692_104846091 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MHHYRGLVPCLMSERKHNPGLSEMSLEFVVRGNGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0207692_108414592 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | EFNNDANFGDASKYGVVTGDETLDDGTIEDTMMHHYRGLVPCLMAERKHNPGLTQMSLDFVVRGNGKVSAVKVNGQKGSFASCVLGRMPTFPKFNGTKTIASWSMAMRACSIRTRSFWSMPPSIRT |
| Ga0207680_101929161 | 3300025903 | Switchgrass Rhizosphere | VKLSFQKVSTVKRGSGHHGGGSTAADGEFSNDANFGDASKHSSGGDETLDDQVIEEVMSKHFRGLVPCLMHSGAGEMSVDFVIRGTGKVSAVKVNGQKTGSFPQCVLQRMPMFPKFNGTKTIASWSMSIRR |
| Ga0207663_101851661 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | EFNNDANFGDASKYGQVTGDETLDDGTIEDTMMHHYRGLVPCLMAERKHNPGLTQMSLDFVVRGNGKVSAVKVNGQKGSFAGCVLGRMPTFPKFNGTKTIASWSMSMR |
| Ga0207694_111889261 | 3300025924 | Corn Rhizosphere | HHASSGGGAADEFNNDMNMGDVTAAGGGDETLDDGVIQRVMMGNYRSLIPCLMAEKHKNPGLSEMSLDFVVRGTGKVSAVKVNGQKAGSFANCVLGRMPTFPKFNGNKTIASWSMSMR |
| Ga0207644_102693193 | 3300025931 | Switchgrass Rhizosphere | ANFGDASKHGSGGDELLDDQVIEEVMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0207644_111887971 | 3300025931 | Switchgrass Rhizosphere | NFGDASKHGSGGDEMLDDQVIEEVMMKHYRSLVPCLMQERHRSPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMK |
| Ga0207644_117869601 | 3300025931 | Switchgrass Rhizosphere | SNDANFGDASKHGSGGDETLDDQIIEETMMKHYRGLVPCLMQERHRSPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0210135_10416192 | 3300025954 | Natural And Restored Wetlands | YRSLVPCIMSERSRSPGLNQIALEFVIRGTGAVSAVKVNGQKGGSFSDCVLGKMKNFGFPKFNGAKTVASWSMSMR |
| Ga0207677_112145212 | 3300026023 | Miscanthus Rhizosphere | VAGDGDFSNDANFGDASKHGSGGDELLDDAVIEETMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0207639_119854241 | 3300026041 | Corn Rhizosphere | GDDVLDDAVVEETMRNHYRGLVPCLMAERHRSPSVSEMAVDFVIRGTGKVSAVKVNGQKNGPFASCVLGRMPTFPKFNGVKTIASWSMSMR |
| Ga0207708_115908441 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | NDANFGDASKHGSGGDELLDDQVIEEVMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0207683_103640171 | 3300026121 | Miscanthus Rhizosphere | SVAGDGDFSNDANFGDASKHGSGGDDILDGDVIEETMMKHYRSLVPCLMQERKRNAGISEMSLDFVVRGTGKVSAVKVNGQKGGPFASCVLGRMPTFPKFNGNKTIASWSMSMR |
| Ga0209693_103847361 | 3300027855 | Soil | AEFNNDSNFGDASKYAAAGDETLDDGVIEETMMHHYRGLVPCLMSERKHNPGLSEMSLDFVVRGSGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0209579_100608763 | 3300027869 | Surface Soil | DDTLDDGVIQRVMMGNYRGLIPCLMAEKHKNPGLTDMSIDFVVRGTGKVSAVKVNGQRGGAFPSCVLSRMQSFNFPHFNGSKTIASWSMSVR |
| Ga0209181_106807601 | 3300027878 | Freshwater | RVMMRNYRKLVPCIMAAKGIPSIELEFVIRGSGEVSAVKVNGERSGALPSCVLGRMKSFGFPKFDGSKTIASWSMSLR |
| Ga0209486_106648422 | 3300027886 | Agricultural Soil | SKHGSGGDETLDDGVIEETMMRHYRGLVPCLMQERKRNAGVSEMSLDFVVRGTGKVSAVKVNGQKGGSFASCVLGRMPTFPKFNGNKTIASWSMSMR |
| Ga0247675_10103141 | 3300028072 | Soil | NYRSLVPCIMAEKRKEPGLSDIALDFVVRGTGKVSAVKVNGQRGGPFAGCVLGRMQSFGFPKFNGNKTVASWSMSMR |
| Ga0247827_109905372 | 3300028889 | Soil | MLDDQIIEEVMMKHYRGLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0311347_107956762 | 3300029923 | Fen | EFNNDSNFGDASKYASAGDETLDDGVIEETRMHHYRGLVPCLMSERKHNPGLSEMSLDFVVRGSGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0311348_109036443 | 3300030019 | Fen | TLDDGVIEETMMHHYRGLVPCLMSERKHNPGLSEMSLDFVVRGSGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0170834_1055162981 | 3300031057 | Forest Soil | HVAKRGSGGGHHAGGGSKADDAEFNNDSNFGDASKYASAGDETLDDGVIEETMMHYYRGLVPCLMTERKHNPGLSEMSLDFVVRGNGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0308151_10274041 | 3300031124 | Soil | GDFSNDQNFSDASKAGGGGDEMLDDAVIEETMMKHYRSLVPCLMQERHRSPGVSEMSVDFVVRGTGKVSAVKVNGQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0265340_102610801 | 3300031247 | Rhizosphere | ASKYASAGDETLDDGVIEETMMHHYRGLVPCLMSERKHNPGLSEMSLDFVVRGNGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0170820_178369432 | 3300031446 | Forest Soil | SFQGAHVAKRGSGGGHHASSGSKADDAEFNNDSNFGDASKYASAGDETLDDGVIEETMMHHYRGLVPCLMSERKHNPGLSEMSLDFVVRGSGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0318492_102532543 | 3300031748 | Soil | ETLDDGVIEETMMHHYRGLVPCLMAERKHNPGLTEMSLDFVVRGTGKVSAVKVNGQKGAFSSCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0318509_105959341 | 3300031768 | Soil | AVIDETMRKHYRGLVPCLMAERKHNPGLTDMNLDFVIRGSGKVSAIKVNGQKGGSFPSCLLGRMPMFPKFNGVKTIASWSMSMR |
| Ga0310907_102028493 | 3300031847 | Soil | SSGGDELLDDQVIEEVMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0318520_108543322 | 3300031897 | Soil | TMRKHYRGLVPCLMAERKHNPGLTDMNLDFVIRGSGKVSAIKVNGQKGGSFPSCLLGRMPMFPKFNGVKTIASWSMSMR |
| Ga0306923_124635002 | 3300031910 | Soil | TLDDGVIEETMMHHYRGLVPCLMAERKHNPGLTEMSLDFVVRGTGKVSAVKVNGQKGAFSSCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0308174_118614501 | 3300031939 | Soil | SFQGAHVAKRGSSGGHHAGSKADDAEFSNDSNFGDASKYASAGDETLDDGVIEETMMHHYRGLVPCLMNERKHDPGLSQMSLEFVVRGNGKVSAVKVNGQKGGFASCVLSRMPTFPKFNGSKTIASWSMSMR |
| Ga0310912_115090442 | 3300031941 | Soil | EFNNDTNFGDASKYASAGDEILDDAVIDETMRKHYRGLVPCLMAERKHNPGLTDMNLDFVIRGSGKVSAIKVNGQKGGSFPSCLLGRMPMFPKFNGVKTIASWSMSMR |
| Ga0310885_105689052 | 3300031943 | Soil | HGSGGDELLDDQIIEETMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0318505_105932201 | 3300032060 | Soil | TNRASGGGHHASRGGGPAGDGDFSTDQNFGDASKYASAGDEVLDDGVVEETMRNHYRGLIPCLMSERHKNPSVSTMSVDFVIRGSGKVSAVKVNGQKGGSFASCVLGRMPTFPKFNGSKTIASWSMSMQ |
| Ga0315281_118231431 | 3300032163 | Sediment | VVQRVMTSNYRSLVPCIMEERRRTSGLSSINLEFVIRGTGKVSAVKVNGQRSGAFPGCVLGRMQQFGFPRFNGAKTIAGWSMRMS |
| Ga0307472_1013103941 | 3300032205 | Hardwood Forest Soil | LVPCLMAEKHKNPSLSEMSIDFVVRGTGKVSAVKVNGQRGGPFPACVLGRMSSFNFPHFNGSKTIASWSMSIRR |
| Ga0310896_101444361 | 3300032211 | Soil | GVAGDGDFSNDANFGDASKHGSGGDEMLDDQVIEEVMMKHYRSLVPCLMQERHKNPGVSEMSVDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
| Ga0335070_111470771 | 3300032829 | Soil | GSKDDAEFNNDANFGDASKYASAGDETLDDGAIEQTMLHHYRGLVPCLMAERKHNPGLTEMSLEFVVRGTGKVSAVKVNGQKGAFASCVLSRMPTFPKFNGVKTIASWSMSMR |
| Ga0335084_122221102 | 3300033004 | Soil | DGDFTNDQNFGDASKYARAGDEVLDDGVVEDTMRNHYRGLVPCLMAERHKNPSVSEMSVDFVIRGTGKVSAVKVNGQKGGAFANCVLGRMPTFPKFNGVKTIASWSMSMR |
| Ga0314788_108721_3_281 | 3300034666 | Soil | GGDDILDGDVIEETMMKHYRGLVPCLMQERKRNAGISEMSLDFVVRGTGKVSAVKVNNQKGGSFANCVLGRMPTFPKYNGNKTIASWSMSMR |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |