Metagenome / Metatranscriptome Family F076790

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076790
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	70 residues
Representative Sequence	MFRSSVAAFYPLPRCLFYRVGGFHWGRFTIVFMRPPVRSEVKKIVYRMSEILFAAEIAFRRLDGCMAQ
Number of Associated Samples	101
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.93 %
% of genes near scaffold ends (potentially truncated)	56.41 %
% of genes from short scaffolds (< 2000 bps)	83.76 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.641 % of family members)
Environment Ontology (ENVO)	Unclassified (31.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.137 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.58% β-sheet: 0.00% Coil/Unstructured: 60.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00589	Phage_integrase	7.69
PF00903	Glyoxalase	1.71
PF13517	FG-GAP_3	1.71
PF02899	Phage_int_SAM_1	1.71
PF00561	Abhydrolase_1	0.85
PF01425	Amidase	0.85
PF14310	Fn3-like	0.85
PF07883	Cupin_2	0.85
PF13683	rve_3	0.85
PF16640	Big_3_5	0.85
PF07929	PRiA4_ORF3	0.85
PF12779	WXXGXW	0.85
PF02463	SMC_N	0.85
PF14559	TPR_19	0.85
PF13570	PQQ_3	0.85
PF16760	CBM53	0.85
PF04343	DUF488	0.85
PF00078	RVT_1	0.85
PF00034	Cytochrom_C	0.85
PF13088	BNR_2	0.85
PF02426	MIase	0.85
PF00072	Response_reg	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	1.71
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	1.71
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.85
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.85
COG4829	Muconolactone delta-isomerase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	88.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	52.99 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.11 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.99 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.11 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.99 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.26 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.99 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.85 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10284285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300004080\|Ga0062385_10825956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300004152\|Ga0062386_101017477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300005163\|Ga0066823_10124960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005455\|Ga0070663_100382769	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1146	Open in IMG/M
3300005467\|Ga0070706_101280907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300005534\|Ga0070735_10315840	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005610\|Ga0070763_10364392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300006059\|Ga0075017_100012070	All Organisms → cellular organisms → Bacteria	5502	Open in IMG/M
3300006059\|Ga0075017_100522958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300009162\|Ga0075423_12305265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300009522\|Ga0116218_1388699	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300009551\|Ga0105238_12850877	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300009617\|Ga0116123_1148009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300009762\|Ga0116130_1254085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300010159\|Ga0099796_10298350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300010339\|Ga0074046_10208781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1225	Open in IMG/M
3300010373\|Ga0134128_11480141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300010379\|Ga0136449_100051662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9229	Open in IMG/M
3300010379\|Ga0136449_102438015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300011120\|Ga0150983_11955894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300011269\|Ga0137392_10278334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1380	Open in IMG/M
3300011270\|Ga0137391_11520671	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300012210\|Ga0137378_10658697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	957	Open in IMG/M
3300012683\|Ga0137398_11030178	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300012918\|Ga0137396_10669682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300012930\|Ga0137407_11371450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300012944\|Ga0137410_11059268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300012960\|Ga0164301_10894512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300012984\|Ga0164309_11942213	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300013297\|Ga0157378_11163780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300014056\|Ga0120125_1166347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300014164\|Ga0181532_10000110	All Organisms → cellular organisms → Bacteria	79244	Open in IMG/M
3300014200\|Ga0181526_10269208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1086	Open in IMG/M
3300014498\|Ga0182019_10675297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300014501\|Ga0182024_10053715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6334	Open in IMG/M
3300014638\|Ga0181536_10388544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300015053\|Ga0137405_1108181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300015374\|Ga0132255_101627113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300017822\|Ga0187802_10149041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300017823\|Ga0187818_10170523	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300017823\|Ga0187818_10514739	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300017924\|Ga0187820_1086333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300017925\|Ga0187856_1014559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4289	Open in IMG/M
3300017933\|Ga0187801_10265309	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300017933\|Ga0187801_10407858	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300017934\|Ga0187803_10195845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	796	Open in IMG/M
3300017942\|Ga0187808_10113350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300017955\|Ga0187817_10293380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1037	Open in IMG/M
3300018001\|Ga0187815_10539982	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300018007\|Ga0187805_10427615	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300019879\|Ga0193723_1171151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300020579\|Ga0210407_10342353	All Organisms → cellular organisms → Bacteria → Acidobacteria	1169	Open in IMG/M
3300020579\|Ga0210407_11025002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300020579\|Ga0210407_11350754	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300020581\|Ga0210399_10011737	All Organisms → cellular organisms → Bacteria	6861	Open in IMG/M
3300020582\|Ga0210395_10915363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300021171\|Ga0210405_10003003	All Organisms → cellular organisms → Bacteria	16893	Open in IMG/M
3300021171\|Ga0210405_10043930	All Organisms → cellular organisms → Bacteria → Acidobacteria	3546	Open in IMG/M
3300021171\|Ga0210405_10177871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1686	Open in IMG/M
3300021178\|Ga0210408_10535140	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300021180\|Ga0210396_10002728	All Organisms → cellular organisms → Bacteria	17851	Open in IMG/M
3300021180\|Ga0210396_10428781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300021180\|Ga0210396_11180195	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300021404\|Ga0210389_10946003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300021405\|Ga0210387_11006163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300021407\|Ga0210383_10191935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1745	Open in IMG/M
3300021420\|Ga0210394_11187444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300021432\|Ga0210384_11157766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300021474\|Ga0210390_11274313	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300021477\|Ga0210398_11327358	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300021479\|Ga0210410_10145905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2108	Open in IMG/M
3300021479\|Ga0210410_10152258	All Organisms → cellular organisms → Bacteria	2061	Open in IMG/M
3300021479\|Ga0210410_10542658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300021479\|Ga0210410_10812061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300021479\|Ga0210410_10850510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300021559\|Ga0210409_10875805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300022733\|Ga0224562_1014552	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300022881\|Ga0224545_1011719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1322	Open in IMG/M
3300024227\|Ga0228598_1086253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300024271\|Ga0224564_1129383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300024330\|Ga0137417_1499831	All Organisms → cellular organisms → Bacteria → Acidobacteria	1580	Open in IMG/M
3300025910\|Ga0207684_11604827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300026291\|Ga0209890_10251047	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300026294\|Ga0209839_10063770	All Organisms → cellular organisms → Bacteria → Acidobacteria	1306	Open in IMG/M
3300026376\|Ga0257167_1080755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300026377\|Ga0257171_1054130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300026469\|Ga0257169_1031003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300026497\|Ga0257164_1063032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300026515\|Ga0257158_1034514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300027069\|Ga0208859_1006451	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300027562\|Ga0209735_1029614	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300027698\|Ga0209446_1194507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300027783\|Ga0209448_10001582	All Organisms → cellular organisms → Bacteria → Acidobacteria	6981	Open in IMG/M
3300027812\|Ga0209656_10116425	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1382	Open in IMG/M
3300027889\|Ga0209380_10063071	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300027894\|Ga0209068_10040569	All Organisms → cellular organisms → Bacteria → Acidobacteria	2337	Open in IMG/M
3300027905\|Ga0209415_10832331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300030862\|Ga0265753_1047018	All Organisms → cellular organisms → Bacteria → Acidobacteria	755	Open in IMG/M
3300030878\|Ga0265770_1010257	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300031231\|Ga0170824_115276908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300031474\|Ga0170818_111297636	All Organisms → cellular organisms → Bacteria → Acidobacteria	1252	Open in IMG/M
3300031715\|Ga0307476_10222393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1374	Open in IMG/M
3300031718\|Ga0307474_10103542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2128	Open in IMG/M
3300031720\|Ga0307469_11060943	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031720\|Ga0307469_11542430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300031720\|Ga0307469_11893429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300031754\|Ga0307475_10990481	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300031820\|Ga0307473_10355185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300031823\|Ga0307478_10954265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300032160\|Ga0311301_10062333	All Organisms → cellular organisms → Bacteria	8107	Open in IMG/M
3300032174\|Ga0307470_10258583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1155	Open in IMG/M
3300032180\|Ga0307471_100131324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2361	Open in IMG/M
3300032954\|Ga0335083_10124542	All Organisms → cellular organisms → Bacteria	2484	Open in IMG/M
3300033004\|Ga0335084_10258007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1805	Open in IMG/M
3300033433\|Ga0326726_10402491	All Organisms → cellular organisms → Bacteria → Acidobacteria	1299	Open in IMG/M
3300033887\|Ga0334790_019834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3059	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.87%
Host-Associated	Host-Associated	5.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.50%
Aquatic	Environmental → Aquatic	21.37%
Plants	Host-Associated → Plants	5.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.94%
Freshwater	Environmental → Aquatic → Freshwater	18.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.27%
Sediment	Environmental → Aquatic → Sediment	2.56%
Peat	Environmental → Terrestrial → Peat	2.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.80%
Loam	Environmental → Terrestrial → Soil → Loam	6.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.37%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	9.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.13%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	9.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.27%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_102842851	3300003505	Forest Soil	MFRSSVAAFYPLPSRLFYRIGRFHGGGFIIVFLRAPPLCSEIKKVVDWVSEILFAAEIAFCRLNRCVA
Ga0062385_108259561	3300004080	Bog Forest Soil	MVRSSVAAFYPSPRCLFYRIGRFRCGRFTIVFMRPPVRSEVKKIIHRMSEILFAAEIAFRGLHRCMPE
Ga0062386_1010174771	3300004152	Bog Forest Soil	MFRSSVAAFYPLPRRHFYRRGSCHHGRFRTVLRLRVRSEVKKVVDRMSEILFAAEIAFRR
Ga0066823_101249602	3300005163	Soil	LPRCLFYIGGGFHWGRFTIVFVRLPVRSEGKKIVHRMSKILFAAEIAFGRLHGYMPQQ
Ga0070663_1003827691	3300005455	Corn Rhizosphere	MFRSSVAAFYPLPRCLFYRSGRFHRGGFIIVFLELVRSEVKKVVHWMSEILFAAEIAFRRLHGGMPQQELDL
Ga0070706_1012809071	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MFQSSVPAFYPLPRCLFYRVGRFHCGGFIIVFLRPPLRSELKKVVHWMSEILFAAEIAF
Ga0070735_103158401	3300005534	Surface Soil	MFRSSVAAFYPLPRCLFYWIGRFHCGGFIIVFLRPPPVCSEIKKVVHWMSEILFATEIAFRCLDGCMPQQELN
Ga0070763_103643921	3300005610	Soil	VADGMVMFRSSVAAFYPLPSRLFYRIGRFHGGGFIIVFLRAPPLCSEIKKVVDWVSEILFAAEIAFCRLNRCVAQQELNLL*
Ga0075017_1000120705	3300006059	Watersheds	MFRSSVAAFYPLPRCLFYRVGGFHGGGFIIVFLRLSVRSEVKKVVHRMSEILFAAQIA*
Ga0075017_1005229582	3300006059	Watersheds	MVRSSVAAFYPLPRCLFYRVGGFHWGRFTIVFMRPPVRSEVKEIIHWMSEILFAAEIAFRGLHGGMSE*
Ga0075423_123052652	3300009162	Populus Rhizosphere	VPAFYPLPRCLFYRVGRFHCGGFIIVFLRPPLRSELKKVVHWMSEILFAAELAFRCLHGCMPQQELNLLQLA
Ga0116218_13886991	3300009522	Peatlands Soil	MVRSSVAAFYPSSRCLFYRVGGFRCGRFTIVFLRPPVRSEVEKIIHRMSEILFAAEIAFHRLHRGMAQ*
Ga0105238_128508772	3300009551	Corn Rhizosphere	RSSVAAFYPLPRCLFYRGGRFHRGGFIIVFLELVRSEVKKVVHWMSKILFAPEIAFGCLDGCMPQ*
Ga0116123_11480091	3300009617	Peatland	MFRSSVAAFYPSPRCLFYRVGGFHWGRFTIVFMRPPGRSEIKKIVHRMSEI
Ga0116130_12540851	3300009762	Peatland	MFRSSVAAFYPLPRCLFYRVGGFHWGRFTIVFMRPPGRSEIKKIVY
Ga0099796_102983501	3300010159	Vadose Zone Soil	MVRSSVAAFYLLPRCLFYWVGRFHCGGFIILFLRPPLRSELKKVVHWMSEILFAAEIAFRCLDGCMPQQELNLLQLTAATVAQFR
Ga0074046_102087811	3300010339	Bog Forest Soil	VAAFYALPRCLFYSSGPFHCFTFNILILWLHVRSEVKQIVHRMPEILFATEIAFR
Ga0134128_114801411	3300010373	Terrestrial Soil	MFRSSVAAFYPLPRCLFYRVGRFHCGGFIIVFLRPPLRSELKKVVHWMSEILFAAEIAFRCLDGCMPQQELNLLQLSTANVAQFAQVLHKSCGAICSKP
Ga0136449_1000516621	3300010379	Peatlands Soil	MFRSSVAAFYLLPRRLFYRVGRLYCGRFTIVFMRPPVWSEVKKIVHWMSEILFAAEIAFRRLDGCMA
Ga0136449_1024380151	3300010379	Peatlands Soil	MFRSSVAAFYPLPRCLFYRAGRFHWGGFVIVFLRPSIRSEVEKVVHWMPEILFAAEIAFRGLHGCMPEQELNLL*
Ga0150983_119558942	3300011120	Forest Soil	VPAFYPRPGCHFYWIGGFRSGRFNIVFIRPSVLCEVKKIVDRVSQILFAAEIAFCRLNRCVAQQE
Ga0137392_102783343	3300011269	Vadose Zone Soil	MVRSSVAAFYPLPRCLFYRVRRFHWGEFIIVFLRPSVRSEVKKVVHWMAEILFAAEIAFRCLDGCMPQQELNLLQLATATVA
Ga0137391_115206712	3300011270	Vadose Zone Soil	SSVAAFYPLPRCLFYRSGAFHCDTFNILFLAPHVRYEVKKIGHRMPEILFAAQVPFRCLDGCMPSKN*
Ga0137378_106586972	3300012210	Vadose Zone Soil	MFRSSVAAFYLLPRCLFYRVGGFRWGGFTIVFMRPPVRSEVKKIIYRMSEILFAAEIAFRRLDGCMA*
Ga0137398_110301781	3300012683	Vadose Zone Soil	VRSSVAAFYPLPRCLFYRVGHFHRVGFIIIFLRPPLRSELKTVVHWRSEILFVAEIGFRCMDGCMPE*
Ga0137396_106696823	3300012918	Vadose Zone Soil	MVRSSVAAFYPLPRCLFYRVRRFQCGGFIIVFLRLSLGSQLKKVVHWMSEILFAAEIAFRCLDGCMPQQELNLLQLATATVAQFRAGSPQVMRRNML
Ga0137407_113714502	3300012930	Vadose Zone Soil	MVRSSVAAFYRLPRCLFYIVGGFPWGRFTIVFVRLPIRSEVKKIVHRMSEILFAAEIAFRRLHGYMPQQELNLLKLSAVRVAQ
Ga0137410_110592681	3300012944	Vadose Zone Soil	MVRSSVAAFYRLPRYLFYIVGGFHWGSFTIAFVRLPVRFEVKKIIHRMSEILFAAEIAFRRLHGYMPQQELNLLKLSAVRVAQLRAGSPQVMRCN
Ga0164301_108945122	3300012960	Soil	MVMVRSSVAAFYRLPRCLFYIVGGFHWGRFTIIFMRLPLRSEVKKIVHWMSEILFATEIAFRRLHGHMPQQELNLLQLSAVRVAQLRAGSP
Ga0164309_119422131	3300012984	Soil	MVRSSVAAFYRLPRYLFYIVGGFHWGRFTIVFVGLPVRSEVKKIVHRMSEILFAAEIAFRRLHGYVPQQELNLLKLSAVRVAQLRTGSPQVMRRNMLQASSLAAG
Ga0157378_111637801	3300013297	Miscanthus Rhizosphere	MFRFSVAAFYLLPRCLFYRGGRFHRGGFIIVFLELVRSEVKKVVHWMSEILFAAEIAFRR
Ga0120125_11663471	3300014056	Permafrost	VAAFYPLPRCLFYRVGRFHCGGFIIVFLQLPLRSEFKKVVHWMSEILFAAEIAFRCLDGCMPQQELN
Ga0181532_1000011074	3300014164	Bog	MFRSSVAAFYPLPRCLFYRVGGFHWGRFSIVFMLPPGSSEVKEIVHWMPEILFAAEIAFRGLH*
Ga0181526_102692083	3300014200	Bog	MFRSSVAAFYPLARRHFYGRGSVLRGGFTIVFMRAFRSKVKKVVHWMPEILFAAEIAFRGLH
Ga0182019_106752971	3300014498	Fen	MAAFYPLPRCLFYRVRRSYCSGFIIVFLRPPVRSEVKKIIYRMSEILFAAQIAFRCLDGCVPQQELDLLQLATARVAQLRAGS
Ga0182024_100537157	3300014501	Permafrost	MFRSSVSAFYPLPRCSFYKVGRFYCGGFIIVFLRLLLRSQLKKVVHRMSEILFAAEITFRRLYGCVPQQELNLL*
Ga0181536_103885441	3300014638	Bog	MFRSSVAAFYPLPRCLFYRVGGFHCGGFTIVFMRAPFRSEVKKIVHRMSEILFAAKIAFRRL
Ga0137405_11081812	3300015053	Vadose Zone Soil	MVRSSVAAFYPLPRCLFYWVGGLHCGGFIIVFLRPPPLRSELKKVVYWMSEILFAAI*
Ga0132255_1016271131	3300015374	Arabidopsis Rhizosphere	MVRTSVAAFYRLPRFLFYIVGGFHCGRFTIVVVRLPVSSEVKKIVHRMSEILFAAEIAFRRLHRYVPQQELNLLKLSAVRVAQLRTGSPQIMRCNM
Ga0187802_101490412	3300017822	Freshwater Sediment	MVRSSVAAFYLLPRCLFYRVRCFRCGGFIIVFMEPPVLCEVEKIVDRVSEILLAAEIAFCRLNGCVAQQELNLL
Ga0187818_101705232	3300017823	Freshwater Sediment	MVRSSVAAFYPLPRCLFYTVGGFHWGRFTIAFMRPPDRSEVKKIVYRMSEILFAAEIAFRRLDGCVAQ
Ga0187818_105147391	3300017823	Freshwater Sediment	MVRSSVAAFYPLPRCLFYRFGGFHWGRFTIVFMRPPGGSEVKKIVHRVSEILFAAEIAFGRLDGCMAQ
Ga0187820_10863331	3300017924	Freshwater Sediment	MVRSSVRAFYPLPRCHFYRIGGFRSGRFIIVFMRPSVLCEVKKIVDRVSEILFAAEIAFRRLNGCVAQQELNLL
Ga0187856_10145595	3300017925	Peatland	MVRSSVAAFYPLPRCLFYRVGGFHWGRFTIVFMRPPDRSEVKKIVHRMSEILFAAEIAFRGLH
Ga0187801_102653092	3300017933	Freshwater Sediment	MVRSSVAAFYPLPRCLFYRVGGFHWGRFIIVLMRPPIRSEVKKIVHGMAEILLAAEIPFRRLHRCMPQQELNLLQLTTTVVTQLRACPA
Ga0187801_104078582	3300017933	Freshwater Sediment	CLFYRVRRFRCGGFIIVFMQLPVLCEVKKIVDGVSEILFAAEIAFCRLNGCVAQQELNLL
Ga0187803_101958451	3300017934	Freshwater Sediment	MFRSSVAAFYPLPRCLFYRVGGFHWGRFTIVFMRPPVRSEVKKIVYRMSEILFAAEIAFRRLDGCMAQ
Ga0187808_101133502	3300017942	Freshwater Sediment	MVRSSVATFYPLPRSLFYRVKCFRCGGFIIVFMQPPVLCKVKKIVDGVSEILFAAEIAFRRLNGCVAQQKLNLL
Ga0187817_102933801	3300017955	Freshwater Sediment	MVRSSVAAFYPLPRCLFYRVGGFHWGRFIIVLMRPPIRSEVKKIVDRMSEILFATKIAFRRLDGCMAQ
Ga0187815_105399822	3300018001	Freshwater Sediment	MVRSSVAAFYPLPRCLFYRVRRFRCGGFIIVFMQPPVLCEVKKIVDGVSEILFAAEIAFCRLNGCVAQQELNLL
Ga0187805_104276152	3300018007	Freshwater Sediment	VAAFYPLPKCLFHRVRGFHDVRFTILFMRPAVRSEVKKIIYRMSEILFAAEIAFRGLHGCMPEQELNLL
Ga0193723_11711512	3300019879	Soil	VAAFYPLPRCLFYIVRGFHWGRFTIVFVRLPVRSQVKKIVHRMSEILFAAEIAFRRLHRYMPQQELNLLKLSAVRVAQL
Ga0210407_103423532	3300020579	Soil	DGLVMFRSSVAEFYRLPRCLFYRVERFQRARFTIVFMRPPVPSEIKKVVYRMSEILLAAEIPFRRLHRCMPQQELNLLQLTTTVVTQLRACPA
Ga0210407_110250022	3300020579	Soil	MPLPHRRSFHSGRLTIVFLRRSVRSEVKKIVHRMAEILFAAEIAFRRLHRCVPEHELNLLKLSAA
Ga0210407_113507541	3300020579	Soil	VAAFYRLPRYLFYIVGGLHWGRFTIAFVRLPVRSEVKKIIHRMSKILFAAQIAFGRLHRYMPQQELNLLKLSAVRVAQLRTGSPQIMRGNMLQARSLA
Ga0210399_100117375	3300020581	Soil	MVRSSLPAFYPRPRCHFYRIGGFRSGRFNIVFMQPPVLCEVKKIVDRVPEILFAAEIAFCRLNRCVAQQELNLL
Ga0210395_109153631	3300020582	Soil	MVRSSVAAFYRLPRCLFYIVGGFHCGRFTIVFVRLPVRSEVKKIVHRMSEILFAAEIA
Ga0210405_1000300311	3300021171	Soil	VSAFYPRPGCDFYWIGGFRCGRFNIVFLRPPVLCEVKKIVDRVSEILFAAEIAFRRLNGCVAQQELNLL
Ga0210405_100439301	3300021171	Soil	MVRSSVAAFYPLPRSLFYRVRPFRCGGFIIVFMQPPVLCEVKKIVDRVSEILFAAEIAFRRLNGCVAQQE
Ga0210405_101778711	3300021171	Soil	MVRSSVAAFYPLPRRLFYRIGRLHGGRFTIVFMRTPVGSEVKKIVHWMPEILFAA
Ga0210408_105351402	3300021178	Soil	MVRSSVSAFYPRPGCDFYWIGGFRGGRFNIVFLRPPVLCEVKKIVDRVSEILFAAEIAFCRLNGCVAQQKLNLL
Ga0210396_100027283	3300021180	Soil	VAAFYPLPRCLFYRIGGFRCAGFNIVFLRPSVLCEVKKIVHRMSEILFAAEVAFRCLHGCVPEQELDLL
Ga0210396_104287811	3300021180	Soil	MVRSSVPAFYPQPGCHFYTGCHFYWIGGFRSGRFNIVFVRPAVLCEVKKIVDRVSEILFAAEIAFCRLNRCVAQQE
Ga0210396_111801952	3300021180	Soil	MVRSSVAAFYLLPRCRFYRVKRFRCGGFIIVFMQPPVLCEVKKIVDRVSEILFAAEIAFCRLNRCVAQQE
Ga0210389_109460031	3300021404	Soil	VAAFYRLPRCLFYIVGGFHCGRFTIVFVRLPVRSEVKKIVHRMSEILFAAEIAFRRLHGHMPQQELNLLKLSAVRVAQLRTGS
Ga0210387_110061631	3300021405	Soil	MFGFSVAAFYPLPRCLFYRVGRFHCGGFIIFFLRSPVRSEVKKIVYRVSEILFATEIAFCRLDGSM
Ga0210383_101919352	3300021407	Soil	MFRSSVAAFYPLPRFLFYRVGGFRWGRSSIVFMQPSVGSEVKKIIYRMSEILFAAEIA
Ga0210394_111874442	3300021420	Soil	MVRSSVAAFYPLPRCLFYRIGGFRCAGFNIVFLRPSVLCEVKKIVHRMSEILFAAEVAFRCLHGCVPEQELDLL
Ga0210384_111577662	3300021432	Soil	MFRSSVAAFYPLPRCHFYSFVGGFHWGRLTIVFMGPPTRSEVEKVVHWMSEIL
Ga0210390_112743131	3300021474	Soil	RSSVAEFYRLPRCLFYRVERFQRARFTIVFMRPPVPSEIKKVVYRMSEILLAAEIPFRRLHRCMPQQELNLLQLTTTVVTQLRACPGRS
Ga0210398_113273582	3300021477	Soil	MVRSSVPAFYPRSGCDFYKIRGFRSGRFNIVFMRPAILCEVKKIVDRMSEILFAAEIAFRRLHGCVAQQELNLL
Ga0210410_101459052	3300021479	Soil	MLPWAPERRRPAARPSVAAFYLLPGCLFYRVRCFRCGGFIIVFMQPSVLCEVKKIVDRVSQILFAAE
Ga0210410_101522582	3300021479	Soil	VSAFYPRPGCDFYWIGGFRCGRFNIVFLRPPVLCEVEKIVDRVSEILFAAEIAFRRLNGCVAQQELNLL
Ga0210410_105426583	3300021479	Soil	MFRSSVAAFYPLPRRLFYRVGGFHWGRFTIVFMRPPVRSEIKKVVYRMSEILFAAQIAFRGLHGCMPEQELNLL
Ga0210410_108120611	3300021479	Soil	MFRSSVAAFYPLPSRLFYRIGRFHGGGFIIVFLRAPPLCSEIKKVVDWVSEILFAAEIAFCRLNRCVAQQELNLL
Ga0210410_108505102	3300021479	Soil	MVRSSVLAFYPRPGCHFYWIGGFRSGRFIIVFMQPAVLCEVKKIVDRVSEILFAAEIAFCGLNRCVAQQELNLL
Ga0210409_108758052	3300021559	Soil	MVRSSVAAFYRLPRCLFYIVGGFHCGRFTIVFVRLPVRSEVKKIVHRMSEILFAAEIAFRRLHGHMPQ
Ga0224562_10145522	3300022733	Soil	MFRSSVAAFYPLSSRLFYRVGRFHCGGFIIVFRRVPSFCSEIKKVVHWMAEILFATEIAFRRLDRCMPEQKLNLL
Ga0224545_10117191	3300022881	Soil	MFRSSVAAFYPSPRSFFYRVGRRFHCGGCVIVFLRPARSELKKVVHWMSE
Ga0228598_10862532	3300024227	Rhizosphere	MVRSSVPAFYPRPGCLFYRVGRFHCGGFIIVFLPAPPVCSEIKKVVHRMPEILFATEI
Ga0224564_11293832	3300024271	Soil	VAAFYPLPRCFFYRVGRFHWGGFIIVFRRLPVRSEVKKVVHWMSEILFAAEIAFRCLDGCMPQQEL
Ga0137417_14998312	3300024330	Vadose Zone Soil	LPRCLFYRVGAFSVARFIIVFLRLPLGSQLKKVVHWMSEILFAAQIAF
Ga0207684_116048271	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVRSSVAAFYPLPKCLFYRAGRFHCGGFIIVFLRPPLRSELKKVVHWMSEILFAAEI
Ga0209890_102510472	3300026291	Soil	MFRPSVAAFYSLPRCLFYRLGGCHCDRFTIVFIRPPLGSEVKKIVYGMSEILFAAEIPFRRLHRCMPQQELNLL
Ga0209839_100637703	3300026294	Soil	MFRSSVAAFYPLARCLFYRVGGFRWIRFTIVFMLMRPPVRSEVKQIIYRMSEILFAAEIAFRRLDGCMAQ
Ga0257167_10807552	3300026376	Soil	VAAFYPLPRCLFYRVGRFHWGEFIIVFLRPSVRSELKKVVHWMAEILFAAEIAFRCLDGCMPQQELNLL
Ga0257171_10541301	3300026377	Soil	MVRSSVAAFYPLPRCLFYRVGRFHCGGFIIVFLWPPLRSELKKVVHWMSEILFAAEIAF
Ga0257169_10310032	3300026469	Soil	MFRSSVAAFYPLPRYLFYRVGGFHWGRFTIVFMRPPVPSEIKKVVYRMSEILFAAEIAFRRLDGRMTQ
Ga0257164_10630322	3300026497	Soil	VAAFYPLPRCLFYRVRRFHWGEFIIVFLRPSVRSEVKKVVHWMAEILFAAEIAFRCLDGCMPQQELNLLQLATAA
Ga0257158_10345141	3300026515	Soil	MFRSSVPAFYPLPRCLFYRVGRLHWSGFIMVFLRPPIRSEVEKVVHWMPEILFAAEIAFRGLH
Ga0208859_10064511	3300027069	Forest Soil	VAAFYPLPRCLFYRIGGFRCAGFNIVFLRPSVLCEVKKIVDRVSEILFAAEIAFCRLNGCVAQQELNLL
Ga0209735_10296142	3300027562	Forest Soil	MFRSSVAAFYALPRYLFYRVGGFHCGRFTIVFRRPPVRSEIKKIVYRMSEILFAAKIAFRRLDGRMTQ
Ga0209446_11945071	3300027698	Bog Forest Soil	MFRSSVAAFYPLPRWLFYRVGGFRWGRFTIVFMRPPVGSEVKKIVHRMSEILFAAEIALRRLHGCMP
Ga0209448_100015822	3300027783	Bog Forest Soil	MVRSSVAVFYPLRRCLFYRVGGLHCGRFTIVIMRTRVRSEVKKVVHWMSEILFAAEIAFGRLHRCVPQQELNLL
Ga0209656_101164252	3300027812	Bog Forest Soil	VAAFYALPRCLFYSSGPFHCFTFNILILWLHVRSEVKQIVHRMPEILFATEIAFRCLDGCMA
Ga0209380_100630712	3300027889	Soil	MVRSSVAAFYLLPRCRFYRVKRFRCGGFIIVFMQPPVLCEVKKIVDRVSEILFAAEIAFCRLNGCVAQQELNLL
Ga0209068_100405691	3300027894	Watersheds	VAAFYPLPRCLFYRVGRFHWSGFIIVFLRPPVRSELKKVVHWMSEILFAAEIAQMCCSTFALL
Ga0209415_108323312	3300027905	Peatlands Soil	MVRSSVAAFYPSSRCLFYRVGGFRCGRFTIVFLRPPVRSEVEKIIHRMSEILFAAEIAFR
Ga0265753_10470181	3300030862	Soil	MVRSSVPAFYPLPRCHFYRIGGFRSGRFNIVFLRPSVLCEIKKIVDRVSEILFAAEIAFCRLNRCVAQQELNLL
Ga0265770_10102573	3300030878	Soil	MVRSSVAAFYLLPRCRFYRVKRFRCGGFIIVFMQPPVLCEVKKIVDRVSEILFAAEIAFCRLNRCVAQQELNLL
Ga0170824_1152769082	3300031231	Forest Soil	MTRTSVAAFYPLPRCHFYRIGGFRSGGLNIAFKWPSVLCEVKKIIDRVSEILFAAEIAFCGLNGCVAQQKLNLL
Ga0170818_1112976362	3300031474	Forest Soil	LAFYPLPRCHFYRIGGFRFGRFSIVFMRPSVLCEVKKIVDRVSEILFAAQIAFRRLH
Ga0307476_102223932	3300031715	Hardwood Forest Soil	VAAFYRLPRFLFYIVGGAHWSRFTIVLVRLPVRSEVKKIVHRMSEILFAAEMAFRRLHGYMPQQELSLLKLSAARVAQLRTGSP
Ga0307474_101035422	3300031718	Hardwood Forest Soil	MVRSAVAAFYRLPRFLFYIVGGAHWSRFTIVLVRLPVRSEVKKIVHRMSEILFAAEMAFRRLHGYMPQQELSLLKLSAARVAQLRTGSP
Ga0307469_110609431	3300031720	Hardwood Forest Soil	MVRSSVAAFYPLPRCLFYGRVGLHRGTFNILFLRPPLRSEVEEIVYRLSEILLAAEIAFRCLHRHMPEQELNLLQF
Ga0307469_115424302	3300031720	Hardwood Forest Soil	VAAFYPLPRCLFYRVERFHCGGFIIVFLRPPLRSELKKVVHWISEILFAAEIAFRCLDGCMPQQELNLLQLATATV
Ga0307469_118934291	3300031720	Hardwood Forest Soil	MVRSSVAAFYPLPGCLFYRAGRFHCGGFIIVFLRPPLRSELKKVVHWMSEILFAA
Ga0307475_109904811	3300031754	Hardwood Forest Soil	MVRSSVAAFYRLPRCLFYGVGRFQQARFTIVLMRPPVRSEVEEVAYRMSEILFAA
Ga0307473_103551852	3300031820	Hardwood Forest Soil	MFRSSVAAFYPLPRCLFYKVGGFHWGRFAIVFMRPPVRSEVKKVVYRMAEILFAAEIPFRRLDRCMSQQELNLLQLTPTVVTQLRACPA
Ga0307478_109542652	3300031823	Hardwood Forest Soil	VAAFYRLPRCLFYIVGGFHWDRFTIVFVRLPVRSEVKKIVHRMSEILFATEIAFRRLHGYVPQQKLNLLKLSAVRVAQLRTGSPQVMRC
Ga0311301_100623333	3300032160	Peatlands Soil	MFRSSVAAFYLLPRRLFYRVGRLYCGRFTIVFMRPPVWSEVKKIVHWMSEILFAAEIAFRRLDGCMAQ
Ga0307470_102585832	3300032174	Hardwood Forest Soil	MFRSSVAAFYPLPRCLFYKVGGFHWGRFTIVFMRPPVRSEVKKVVYRMAEILFAAEIPFRRLDRCMSQQELNLLQLTPTVVTQLRACPA
Ga0307471_1001313242	3300032180	Hardwood Forest Soil	MVRSSVAAFYSWGRRLFYRSGAFHCGIFNIPFLRMHVRSEFKKIVHRMSEILFAAEIG
Ga0335083_101245421	3300032954	Soil	MFRSSVAAFYPLPRCLFYRVGGFYRVRFTIAFMLRPIRCELEKIVYRMSEILLAAEV
Ga0335084_102580074	3300033004	Soil	MFRSSVAAFYPLPRCLFYRVGGFHGGGFIIVFLRLSFRSEVKKVVHRMSEILFAAQIAFRGLDRGMPQQELNLLQLATATVAQLRAGSPQVMRGNML
Ga0326726_104024911	3300033433	Peat Soil	LPRCLFYRVGGFHWGRCTIVFMRPPGHSEVKKIVYRMSEILFAAEIAFRRLDGCVAQ
Ga0334790_019834_2801_3034	3300033887	Soil	MFQSSVAAFYPLPRCPFYRIGRFHFGGFIIVFLRPPPVCSEIKKIVYWMSEILFATEIAFRCLDGCMPEQELTIKVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076790

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences