Metagenome / Metatranscriptome Family F076758

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076758
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	67 residues
Representative Sequence	MSNSHYFERLLESAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSFQTAS
Number of Associated Samples	74
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.21 %
% of genes near scaffold ends (potentially truncated)	19.66 %
% of genes from short scaffolds (< 2000 bps)	82.05 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.265 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (46.154 % of family members)
Environment Ontology (ENVO)	Unclassified (58.974 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.214 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.47% β-sheet: 0.00% Coil/Unstructured: 50.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.9.4: RNA Polymerase II carboxy-terminal domain (CTD)-interacting (CID) domain (RPR domain)	d4flda_	4fld	0.72873
a.118.1.14: MIF4G domain-like	d2nsza1	2nsz	0.72828
c.8.5.1: GroEL-like chaperone, apical domain	d3osxa1	3osx	0.72228
a.118.9.0: automated matches	d4flba_	4flb	0.71147
d.67.3.1: Ribosome recycling factor, RRF	d1wqga_	1wqg	0.70419

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF02639	DUF188	32.48
PF00581	Rhodanese	6.84
PF04255	DUF433	2.56
PF00248	Aldo_ket_red	0.85
PF08240	ADH_N	0.85
PF01266	DAO	0.85
PF00676	E1_dh	0.85
PF13714	PEP_mutase	0.85
PF01750	HycI	0.85
PF13377	Peripla_BP_3	0.85
PF01850	PIN	0.85
PF03372	Exo_endo_phos	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1671	Uncharacterized conserved protein YaiI, UPF0178 family	Function unknown [S]	32.48
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	2.56
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.85
COG0680	Ni,Fe-hydrogenase maturation factor	Energy production and conversion [C]	0.85
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
All Organisms	root	All Organisms	42.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
cellular organisms	root	All Organisms → cellular organisms	42.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	33.33 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	33.33 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	33.33 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	22.22 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	4.27 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	1.71 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	22.22 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2.56 %
unclassified Pirellulales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → unclassified Pirellulales	1.71 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	8.55 %
Pirellulales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → unclassified Pirellulales → Pirellulales bacterium	1.71 %
Maioricimonas	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Maioricimonas	1.71 %
Paludisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera	1.71 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.85 %
Tautonia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia	0.85 %
Planctomyces	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces	0.85 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	5.13 %
unclassified Singulisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera	1.71 %
Maioricimonas rarisocia	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Maioricimonas → Maioricimonas rarisocia	1.71 %
Paludisphaera borealis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	1.71 %
Pirellulales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → unclassified Pirellulales → Pirellulales bacterium	1.71 %
Tautonia plasticadhaerens	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia plasticadhaerens	0.85 %
unclassified Planctomyces	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → unclassified Planctomyces	0.85 %
Aquisphaera giovannonii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	0.85 %
Gemmata palustris	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata palustris	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.26 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	5.13 %
Singulisphaera sp. GP187	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	1.71 %
Maioricimonas rarisocia	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Maioricimonas → Maioricimonas rarisocia	1.71 %
Paludisphaera borealis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	1.71 %
Pirellulales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → unclassified Pirellulales → Pirellulales bacterium	1.71 %
Planctomyces sp. SH-PL62	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → unclassified Planctomyces → Planctomyces sp. SH-PL62	0.85 %
Tautonia plasticadhaerens	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia plasticadhaerens	0.85 %
Aquisphaera giovannonii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	0.85 %
Gemmata palustris	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata palustris	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10023117	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	3789	Open in IMG/M
3300003218\|JGI26339J46600_10015569	All Organisms → cellular organisms → Bacteria	2212	Open in IMG/M
3300003218\|JGI26339J46600_10048453	Not Available	1144	Open in IMG/M
3300003218\|JGI26339J46600_10108527	Not Available	674	Open in IMG/M
3300003219\|JGI26341J46601_10005771	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	4063	Open in IMG/M
3300003219\|JGI26341J46601_10057249	Not Available	1205	Open in IMG/M
3300003219\|JGI26341J46601_10185790	Not Available	568	Open in IMG/M
3300004468\|Ga0068977_1064683	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → unclassified Pirellulales → Pirellulales bacterium	770	Open in IMG/M
3300004469\|Ga0068931_1297611	Not Available	729	Open in IMG/M
3300004596\|Ga0068949_1248388	Not Available	512	Open in IMG/M
3300004602\|Ga0068960_1232510	Not Available	501	Open in IMG/M
3300004605\|Ga0068952_1308958	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1392	Open in IMG/M
3300004609\|Ga0068958_1261935	Not Available	532	Open in IMG/M
3300006086\|Ga0075019_10285094	Not Available	992	Open in IMG/M
3300009520\|Ga0116214_1195827	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → unclassified Pirellulales → Pirellulales bacterium	759	Open in IMG/M
3300009522\|Ga0116218_1049908	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1895	Open in IMG/M
3300009522\|Ga0116218_1152455	Not Available	1049	Open in IMG/M
3300009522\|Ga0116218_1383076	Not Available	628	Open in IMG/M
3300009524\|Ga0116225_1111834	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1261	Open in IMG/M
3300009524\|Ga0116225_1189551	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300009630\|Ga0116114_1044183	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1271	Open in IMG/M
3300009672\|Ga0116215_1398769	Not Available	596	Open in IMG/M
3300009672\|Ga0116215_1422241	Not Available	577	Open in IMG/M
3300009683\|Ga0116224_10146266	Not Available	1138	Open in IMG/M
3300009698\|Ga0116216_10237402	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300009698\|Ga0116216_10250151	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1083	Open in IMG/M
3300009698\|Ga0116216_10380880	Not Available	857	Open in IMG/M
3300009700\|Ga0116217_10217336	Not Available	1251	Open in IMG/M
3300009700\|Ga0116217_10551471	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	721	Open in IMG/M
3300009824\|Ga0116219_10563309	Not Available	627	Open in IMG/M
3300009839\|Ga0116223_10691425	Not Available	586	Open in IMG/M
3300010339\|Ga0074046_10160399	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Maioricimonas → Maioricimonas rarisocia	1430	Open in IMG/M
3300010339\|Ga0074046_10164033	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1412	Open in IMG/M
3300010339\|Ga0074046_10826658	Not Available	541	Open in IMG/M
3300010341\|Ga0074045_10027881	All Organisms → cellular organisms → Bacteria	4307	Open in IMG/M
3300010341\|Ga0074045_10088714	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Maioricimonas → Maioricimonas rarisocia	2154	Open in IMG/M
3300010341\|Ga0074045_10165599	Not Available	1495	Open in IMG/M
3300010343\|Ga0074044_10028160	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3984	Open in IMG/M
3300010343\|Ga0074044_10740427	Not Available	642	Open in IMG/M
3300010343\|Ga0074044_10872302	Not Available	588	Open in IMG/M
3300010360\|Ga0126372_12182621	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia plasticadhaerens	603	Open in IMG/M
3300010379\|Ga0136449_100038689	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	11184	Open in IMG/M
3300010379\|Ga0136449_100216633	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3611	Open in IMG/M
3300010379\|Ga0136449_100246847	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	3322	Open in IMG/M
3300010379\|Ga0136449_100724487	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	1662	Open in IMG/M
3300010379\|Ga0136449_101430330	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300010379\|Ga0136449_101465834	Not Available	1048	Open in IMG/M
3300010379\|Ga0136449_101837108	Not Available	904	Open in IMG/M
3300010379\|Ga0136449_104299860	Not Available	527	Open in IMG/M
3300010379\|Ga0136449_104451554	Not Available	516	Open in IMG/M
3300010862\|Ga0126348_1301656	Not Available	601	Open in IMG/M
3300011022\|Ga0138536_124737	Not Available	569	Open in IMG/M
3300011039\|Ga0138593_110548	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1010	Open in IMG/M
3300011041\|Ga0138591_134366	Not Available	595	Open in IMG/M
3300011045\|Ga0138598_149475	Not Available	756	Open in IMG/M
3300011060\|Ga0138583_1011777	Not Available	966	Open in IMG/M
3300011063\|Ga0138537_1119348	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1037	Open in IMG/M
3300011073\|Ga0138584_1115265	Not Available	695	Open in IMG/M
3300012212\|Ga0150985_112803009	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	508	Open in IMG/M
3300012469\|Ga0150984_118862281	Not Available	522	Open in IMG/M
3300014156\|Ga0181518_10116705	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300014156\|Ga0181518_10186788	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300014156\|Ga0181518_10190701	Not Available	1072	Open in IMG/M
3300014158\|Ga0181521_10139586	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1410	Open in IMG/M
3300014158\|Ga0181521_10184913	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata palustris	1157	Open in IMG/M
3300014159\|Ga0181530_10251580	Not Available	946	Open in IMG/M
3300014162\|Ga0181538_10115258	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	1569	Open in IMG/M
3300014165\|Ga0181523_10362101	Not Available	811	Open in IMG/M
3300014199\|Ga0181535_10264931	Not Available	1033	Open in IMG/M
3300014200\|Ga0181526_10055626	All Organisms → cellular organisms → Bacteria	2522	Open in IMG/M
3300014200\|Ga0181526_10908229	Not Available	554	Open in IMG/M
3300014838\|Ga0182030_10569863	Not Available	1103	Open in IMG/M
3300016702\|Ga0181511_1390449	Not Available	611	Open in IMG/M
3300016750\|Ga0181505_10486488	Not Available	741	Open in IMG/M
3300017823\|Ga0187818_10139946	Not Available	1052	Open in IMG/M
3300017943\|Ga0187819_10833634	Not Available	517	Open in IMG/M
3300017946\|Ga0187879_10087738	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	1792	Open in IMG/M
3300017973\|Ga0187780_10427051	Not Available	942	Open in IMG/M
3300018008\|Ga0187888_1019729	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	3578	Open in IMG/M
3300018037\|Ga0187883_10434192	Not Available	674	Open in IMG/M
3300018058\|Ga0187766_10750313	Not Available	678	Open in IMG/M
3300018085\|Ga0187772_11073842	Not Available	590	Open in IMG/M
3300018086\|Ga0187769_10127540	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1848	Open in IMG/M
3300018086\|Ga0187769_10297026	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → unclassified Planctomyces → Planctomyces sp. SH-PL62	1207	Open in IMG/M
3300018090\|Ga0187770_10478634	Not Available	984	Open in IMG/M
3300019284\|Ga0187797_1285579	Not Available	874	Open in IMG/M
3300019284\|Ga0187797_1799226	Not Available	573	Open in IMG/M
3300027497\|Ga0208199_1005811	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	3120	Open in IMG/M
3300027570\|Ga0208043_1145925	Not Available	619	Open in IMG/M
3300027604\|Ga0208324_1004600	All Organisms → cellular organisms → Bacteria	4902	Open in IMG/M
3300027641\|Ga0208827_1029553	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1965	Open in IMG/M
3300027812\|Ga0209656_10128314	Not Available	1297	Open in IMG/M
3300027812\|Ga0209656_10287539	Not Available	764	Open in IMG/M
3300027824\|Ga0209040_10089175	Not Available	1767	Open in IMG/M
3300027825\|Ga0209039_10015958	All Organisms → cellular organisms → Bacteria	4003	Open in IMG/M
3300027825\|Ga0209039_10185233	Not Available	852	Open in IMG/M
3300027825\|Ga0209039_10203833	Not Available	803	Open in IMG/M
3300027854\|Ga0209517_10156308	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1453	Open in IMG/M
3300027902\|Ga0209048_10066051	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	2886	Open in IMG/M
3300030494\|Ga0310037_10147082	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1070	Open in IMG/M
3300030494\|Ga0310037_10181005	Not Available	943	Open in IMG/M
3300031910\|Ga0306923_12048235	Not Available	579	Open in IMG/M
3300032160\|Ga0311301_10045826	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	10258	Open in IMG/M
3300032160\|Ga0311301_10179334	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	3708	Open in IMG/M
3300032160\|Ga0311301_10235435	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	3053	Open in IMG/M
3300032160\|Ga0311301_10529761	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1732	Open in IMG/M
3300032160\|Ga0311301_11081786	Not Available	1046	Open in IMG/M
3300032160\|Ga0311301_11176325	Not Available	986	Open in IMG/M
3300032160\|Ga0311301_12680607	Not Available	549	Open in IMG/M
3300032892\|Ga0335081_11331389	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	808	Open in IMG/M
3300033402\|Ga0326728_10535372	Not Available	938	Open in IMG/M
3300033405\|Ga0326727_10303750	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1569	Open in IMG/M
3300033405\|Ga0326727_11077475	Not Available	575	Open in IMG/M
3300033755\|Ga0371489_0336061	Not Available	715	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.29%
Host-Associated	Host-Associated	1.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.23%
Aquatic	Environmental → Aquatic	29.06%
Plants	Host-Associated → Plants	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.81%
Freshwater	Environmental → Aquatic → Freshwater	28.21%
Peat	Environmental → Terrestrial → Peat	3.42%
Sediment	Environmental → Aquatic → Sediment	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.42%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	46.15%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	10.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.40%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	7.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.13%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.71%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004468	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004469	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004596	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 37 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004602	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004605	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 40 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004609	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011022	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 14 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011039	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 20 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011041	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 17 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011045	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 66 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011060	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011063	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011073	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100231174	3300000567	Peatlands Soil	MSNSHNFERLLEAAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGENLQEILLGVSVQTAS*
JGI26339J46600_100155693	3300003218	Bog Forest Soil	MSNSHYFERLLESAGLIARHADFPGKWQVVERCREEIEDLTSSGVITSAQGETLQEILLGVSFQTAS*
JGI26339J46600_100484532	3300003218	Bog Forest Soil	MSNSHYFERLLESAGLIARHVDFPGKRQVVERCREEVEDLTSSGLISSAQGETLQEILLGVSVQTAS*
JGI26339J46600_101085272	3300003218	Bog Forest Soil	MSNSHYFERLLRSAGLIARHADFPDKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS*
JGI26341J46601_100057715	3300003219	Bog Forest Soil	FERLLESAGMIARHADFPGKQQVVERCREEVEDLTSSGVISSAQGEILQEILLGVSFQTAS*
JGI26341J46601_100572492	3300003219	Bog Forest Soil	MSDSHYFERLLESAGMIARHADFPGKQQVVERCREEVEDLTSSGVISSAQGEILQEILLGVSFQTAS*
JGI26341J46601_101857902	3300003219	Bog Forest Soil	MSDSRFFERLLETAGLIARHADFPGKRQAVERCREEVEDLTRSGVITSDQGETLQEILX*
Ga0068977_10646831	3300004468	Peatlands Soil	MSDSRFFARLLETAVLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGEMLQEILLGVSFQRAS*
Ga0068931_12976111	3300004469	Peatlands Soil	MSNSHYFERLLESAGLIARHVDFPGKRQVVERCREEVEDLTSSGVISSAQGENLQEILLGVSVQTAS*
Ga0068949_12483882	3300004596	Peatlands Soil	RSAGLIARHADFPDKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS*
Ga0068960_12325102	3300004602	Peatlands Soil	SAGLIARHADFPDKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS*
Ga0068952_13089583	3300004605	Peatlands Soil	MSNSHYFERLLESAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGENLQEILLGVSVQTAS*
Ga0068958_12619352	3300004609	Peatlands Soil	MSNSHYFERLLRSAGLIARHADFPDKRQVVERCREEVEDLTSSGVISSAQGENLQEILLGVSVQTAS*
Ga0075019_102850943	3300006086	Watersheds	MSNSHYFERLLRSAGLIARHADFPDKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSFQTAS*
Ga0116214_11958271	3300009520	Peatlands Soil	IENAVVQHTIHRARQKGSFSMSDSRFFARLLETAVLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGEMLQEILLGVSFQRAS*
Ga0116218_10499082	3300009522	Peatlands Soil	MSDSRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGEMLQEILLGVSFQRAS*
Ga0116218_11524552	3300009522	Peatlands Soil	MSKSHYFERLLESTGMIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS*
Ga0116218_13830761	3300009522	Peatlands Soil	MSDSHYFERLLDSAGMIARHADFPGKQQVVERCREEVEDLTSSGVISSAQGETLQEI
Ga0116225_11118341	3300009524	Peatlands Soil	MSDSRFFERLLETAGLIARHADFAGKQQVVERCREEVEDLTRSGVITSDQGETL
Ga0116225_11895512	3300009524	Peatlands Soil	MSDCHYFERLLESAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGENLQETLLAVSVQTAR*
Ga0116114_10441831	3300009630	Peatland	MSNFHYFERLLESAGLIARHVDFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSVQTAS*
Ga0116215_13987691	3300009672	Peatlands Soil	RQKGSFSMSDSRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGEMLQEILLGVSFQRAS*
Ga0116215_14222411	3300009672	Peatlands Soil	MSNSHYFERLLESAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVS
Ga0116224_101462662	3300009683	Peatlands Soil	MSDSRFFARLLETAVLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFQKAS*
Ga0116216_102374022	3300009698	Peatlands Soil	MSNSHNFERLLEAAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSVRTAS*
Ga0116216_102501511	3300009698	Peatlands Soil	MSDSRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGEMLQEILL
Ga0116216_103808801	3300009698	Peatlands Soil	MSDSHYFERLLDSAGMIARHADFPGKQQVVERCREEVEDLTSSGVISSAQGETLQEILLGVS
Ga0116217_102173362	3300009700	Peatlands Soil	MSNSHNFERLLEAAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSVQTAS*
Ga0116217_105514712	3300009700	Peatlands Soil	MSDSRFFERLLETAGLIARHADFAGKQQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFQRAS*
Ga0116219_105633091	3300009824	Peatlands Soil	MSNSHYFERLLESAGMIARHADFPGKRQAVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS*
Ga0116223_106914252	3300009839	Peatlands Soil	MSSFHYFERLLESAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSVQTAS*
Ga0074046_101603991	3300010339	Bog Forest Soil	MSDSRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLARSGMITSDQGETLQEILLGVSFQKAS*
Ga0074046_101640331	3300010339	Bog Forest Soil	TAGLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFQKAS*
Ga0074046_108266581	3300010339	Bog Forest Soil	MSNSHYFERLLESAGLIARHADFPGKWQVVERCREEIEDLTSSGVITSAQRETLQEILLGVSFQTAS*
Ga0074045_100278816	3300010341	Bog Forest Soil	MSNSHYFERLLESAGLIARHVDFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSVQTAS*
Ga0074045_100887141	3300010341	Bog Forest Soil	MVQDKKGSFFMSDSRFFARLLETAVLIARHADFPDKRQVVERCREEVEDLTRSGVITSDQGEMLQEILLGVSFQRAS*
Ga0074045_101655993	3300010341	Bog Forest Soil	MSNSHYFERLLKSAGMIARHADFPGKRQAVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS*
Ga0074044_100281607	3300010343	Bog Forest Soil	MSNSHYFERLLESAGLIARHVDFPGKRQVVERCREEVEDLTSSGLISSAQGETLQEILLGVSVRTAS*
Ga0074044_107404271	3300010343	Bog Forest Soil	GVQHTIHGARQKGSFSMSDSRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFQKAS*
Ga0074044_108723021	3300010343	Bog Forest Soil	MSNSHYFERLLKSAGMIARHADFPGKRQAVERCREEVEDLTSSGVISSAQGETLQEILLGVSFQTAS*
Ga0126372_121826212	3300010360	Tropical Forest Soil	MSDSQYFERLQETVGLIARHADYPGKRQIVARCQEEVEDLTNSGLITSSQGEALQEILMG
Ga0136449_1000386897	3300010379	Peatlands Soil	MSDSHYFERLLEAAGLIARHADFPGKWQVVERCREEVEDLASSGAITSAQGETLRETLLGVYLQRASCT*
Ga0136449_1002166333	3300010379	Peatlands Soil	VSGSHSFIIPHSAFRIPHSALQEGRLSVSDSHNFERLLEVAGLIARHADFPGKRQVVERCREEVEDLTSSGAISSTQGETLQEILLGVNFQTAS*
Ga0136449_1002468472	3300010379	Peatlands Soil	MSDCHNFERLLEAAGLIARHADFPGKRQVVERCREEVEDLTSSGLISSAQGETLQETLLGVSEQTAS*
Ga0136449_1007244872	3300010379	Peatlands Soil	MNDSHKFERLLEAAGLIARHADFPGKRQVVERCREEVEDLTSSGVISAAQAETLQGILLGVKFHMAI*
Ga0136449_1014303302	3300010379	Peatlands Soil	MSSSHYFERLLESAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSVQTAS*
Ga0136449_1014658341	3300010379	Peatlands Soil	MQKCNTPSIVQDKKGSFFMSDSRFFARLLETAVLIARHADFPDKRQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFQRAS*
Ga0136449_1018371081	3300010379	Peatlands Soil	MSDSHYFERLLDSAGMIARHADFPGKQQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSFQTAS*
Ga0136449_1042998601	3300010379	Peatlands Soil	MRNSDEFERLLEAAGLVARHADFPGKRQVVERCREEVDDLTSAGAISSSQGEILQQILRGVCLQPAG*
Ga0136449_1044515541	3300010379	Peatlands Soil	HADFPGKRQVVERCREEVEDLTRSGVITSDQGEMLQEILLGISFQRASRTVSSAETWNDATS*
Ga0126348_13016562	3300010862	Boreal Forest Soil	MSNSHYFERLLESMGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLREILLGISFQRAS*
Ga0138536_1247371	3300011022	Peatlands Soil	FERLLEAAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS*
Ga0138593_1105481	3300011039	Peatlands Soil	MSSFHYFERLLESAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGENLQEILLGVSVQTAS*
Ga0138591_1343662	3300011041	Peatlands Soil	MSNSHYFERLLRSAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGENLQEILLGVSVQTAS*
Ga0138598_1494752	3300011045	Peatlands Soil	MSNSHNFERLLEAAGLIARHADFSGKRQVVERCREEVEDLTSSGVISSAQGENLQEILLGVSVQTAS*
Ga0138583_10117772	3300011060	Peatlands Soil	MSNSHYFERLLESMGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS*
Ga0138537_11193481	3300011063	Peatlands Soil	MSDCHYFERLLESAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGENLQEILLGVSVQTAS*
Ga0138584_11152651	3300011073	Peatlands Soil	MSDSRFFARLLETAGLIARHADFPGKRQVVERCREEIEDLTRSGVITSDQGEMLQEILLGVSFQRAS*
Ga0150985_1128030091	3300012212	Avena Fatua Rhizosphere	ETVGMIARHTDYPGKRQVVEQCREEVEDLTRSGRITAAQGEILLEILLDACPQLV*
Ga0150984_1188622812	3300012469	Avena Fatua Rhizosphere	MNVAYYERLLETAGLIVRHADYPGKRQVVQLCMEEVEELASSGQITADQEETLQGILAGVSLQTAR*
Ga0181518_101167052	3300014156	Bog	MSDSRFFARLLETAGLIVRHADFPGKRQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFQRAS*
Ga0181518_101867882	3300014156	Bog	MSNSHYFERLLESAGMIARHADFPGKRQAVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAT*
Ga0181518_101907012	3300014156	Bog	MSNSHYFERLLESMGLIARHADFPGKRQVVERCREEVEDLTSSGVISPAQGETLQEILLGVSFQRAS*
Ga0181521_101395862	3300014158	Bog	MSDSRFFARLLETAGLIVRHADFPGKRQVVERCREEVEDLTSSGVITSDQGETLQEILLGVSFQRAS*
Ga0181521_101849132	3300014158	Bog	MSNSHYFERLLESMGLIARHADFPGKRQVVERCREEVEDLTSSGVISPAQGETLQEILLGVSFQTAS*
Ga0181530_102515802	3300014159	Bog	MSNSHYFERLLESMGLIARHADFPGKRQAVERCREEVEDLTSSGVISSVQGETLQEILLGVSFQRASRA*
Ga0181538_101152582	3300014162	Bog	MSNSLYFERLLESMGLIARHADFPGKRQVVERCREEVEDLTSSGVISPAQGETLQEILLGVSFQTAS*
Ga0181523_103621011	3300014165	Bog	MSNSHYFERLLRSAGLIARHADFPDKRQVVERCREEVEDLTSSGVISSAQGETLLEILLGVSFQTAS*
Ga0181535_102649311	3300014199	Bog	MRDCHKFERLLEAAGLIARHADFPGKRQVVERCREEVEDLTISGAISSAQGETLQEILAGVGLQAAS*
Ga0181526_100556263	3300014200	Bog	MSKSHYFERLLESTGMIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSFQTAS*
Ga0181526_109082291	3300014200	Bog	MSDSHNFERLLEAAGLIARHADFPGKRQVVERCREEVEDLRSSGVINSAQGETLQEILMGVSLQTASRA*
Ga0182030_105698632	3300014838	Bog	VSDANEFLRLLEAAGLIARHADFPGKRQIVERCREEVEDLKGAGVLSAAQGETLQEILLGVNFQTAS*
Ga0181511_13904492	3300016702	Peatland	MSNSHYFERLLESMGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSFQTAS
Ga0181505_104864881	3300016750	Peatland	MSNSHYFERLLESMGLIARHADFPGKRQVVERCREEVEDLTSSGVISPAQGETLQEILLGVSFQTAS
Ga0187818_101399461	3300017823	Freshwater Sediment	MSDSHKFERLLEAAGLIARHADFPGKRQVVERCREEVEDLMSSGVISSAEGETLQEILLGVNFRAAG
Ga0187819_108336342	3300017943	Freshwater Sediment	MSDPRFFERLLETAGLIARHADFPGKRQVVERCREEIEDLTRSGVITSDQGETLQEILLGVSFHRAS
Ga0187879_100877381	3300017946	Peatland	MSNSHYFERLLESMGLIARHADFPGKRQVVERCREEVEDLTSSGVISPVQGETLQEILLGVSFQTAS
Ga0187778_111033181	3300017961	Tropical Peatland	MSDPRFFERLLETAGLIARHADFPGKRQVVERCREEIEDLTSSGVISSAQGETL
Ga0187780_104270512	3300017973	Tropical Peatland	MSNSHYFERLLRSAGLIARHADFPDKRQVVERCREEIEDLTSSGAISSAQGETLQEILLGVSFQTAS
Ga0187888_10197293	3300018008	Peatland	MSNFHYFERLLESAGLIARHVDFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSVQTAS
Ga0187869_102136973	3300018030	Peatland	MSNFHYFERLLESAGLIARHVDFPGKRQVVERCREEVEDLTSSGVISSAQGETL
Ga0187883_104341922	3300018037	Peatland	MSDSHYFERLLDSAGMIARHADFPGKQQVVERCREEVEDLTSSGAISSTQGETLQEILLGVSFQTAS
Ga0187766_107503131	3300018058	Tropical Peatland	MSNSHYFERLLESAGMIARHADFPGKQQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS
Ga0187772_110738421	3300018085	Tropical Peatland	MSNSHYFERLLESVGLIARHADFPDKWQVVERCQAEVKDLTSSGVITSAQGETLQEILLGVGLQRAS
Ga0187769_101275401	3300018086	Tropical Peatland	MSDPRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLTRSGVITPDQGETLQEILLGVSFQKAS
Ga0187769_102970263	3300018086	Tropical Peatland	MSNSHYFERLLRSAGLIARHADFPDKRQVVERCREEVEDLTSSGAISSAQGETLQEILLGVSFQTAS
Ga0187770_104786341	3300018090	Tropical Peatland	MSNSHYFERLLRSAGLIARHADFPDKRQVVERCQAEVKDLTSSGVITSAQGETLQEILLGVGLQRAS
Ga0187797_12855792	3300019284	Peatland	MSNNYYFERLLESAGLIARHADFPGKRQIVERCREEVEDLTSSGVITSAQGETLQEILLGVSLQRAG
Ga0187797_17992262	3300019284	Peatland	MSDSNYFERLLESAGMIARHADFPGKQQVVERCREEVEDLTSSGAISAAQGKTLQEILLGVSFQTAS
Ga0208199_10058114	3300027497	Peatlands Soil	MSNSHNFERLLEAAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGENLQEILLGVSVQTAS
Ga0208043_10505791	3300027570	Peatlands Soil	MSNSHYFERLLRSAGLIARHADFPDKRQVVERCREEVEDLTSSGVISSAQGETL
Ga0208043_11459251	3300027570	Peatlands Soil	MSDSRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGEMLQEILLGVSFQRAS
Ga0208324_10046004	3300027604	Peatlands Soil	MSNSHYFERLLRSAGLIARHADFPDKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS
Ga0208827_10295532	3300027641	Peatlands Soil	MSDSRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFQKAS
Ga0209656_101283141	3300027812	Bog Forest Soil	MSNSHFFERLLESAGMIARHADFPGKQQVVERCREEVEDLTSSGVISSAQGEILQEILLGVSFQTAS
Ga0209656_102875392	3300027812	Bog Forest Soil	MSDSRFFERLLETAGLIARHADFPGKRQAVERCREEVEDLTRSGVITSDQGETLQEILLGVSFHKAS
Ga0209040_100891753	3300027824	Bog Forest Soil	MSDSHYFERLLESAGMIARHADFPGKQQVVERCREEVEDLTSSGVISSAQGEILQEILLGVSFQTAS
Ga0209039_100159584	3300027825	Bog Forest Soil	MSNSHYFERLLESAGLIARHADFPGKWQVVERCREEIEDLTSSGVITSAQGETLQEILLGVSFQTAS
Ga0209039_101852331	3300027825	Bog Forest Soil	MSDSRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFHKAS
Ga0209039_102038331	3300027825	Bog Forest Soil	MSNSHYFERLLESAGLIARHVDFPGKRQVVERCREEVEDLTSSGLISSAQGETLQEILLGVSVQTAS
Ga0209517_101563081	3300027854	Peatlands Soil	MSDSRFFARLLETAVLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGEMLQEILLGISFQRASRTVSSAETWNDATS
Ga0209048_100660513	3300027902	Freshwater Lake Sediment	MSDSNFFERLLKTAGLIARHADFPGKRQVVERCREEVEDLTGSGVISSAQGETLQEILLGVSPDYSRHSSEAA
Ga0310037_101470823	3300030494	Peatlands Soil	MSDSRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGEALQEILLGVSFQRAS
Ga0310037_101810051	3300030494	Peatlands Soil	MSDSHYFERLLDSAGMIARHADFPGKQQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSFQTAS
Ga0306923_120482351	3300031910	Soil	PMSKSEYFDRLVETAGLIARHADYPGKRDVVERCREEIEDLARAGRITADEDEELQEILSGVGHEPACSR
Ga0311301_100458266	3300032160	Peatlands Soil	MSDSHYFERLLEAAGLIARHADFPGKWQVVERCREEVEDLASSGAITSAQGETLRETLLGVYLQRASCT
Ga0311301_101793344	3300032160	Peatlands Soil	MSDCHYFERLLESAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSVRTAS
Ga0311301_102354353	3300032160	Peatlands Soil	VSDSHNFERLLEVAGLIARHADFPGKRQVVERCREEVEDLTSSGAISSTQGETLQEILLGVNFQTAS
Ga0311301_105297615	3300032160	Peatlands Soil	MSDSRFFERLLETAGLIARHADFAGKQQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFQRAS
Ga0311301_110817864	3300032160	Peatlands Soil	MSNSHYFERLLESAGLIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSFQTAS
Ga0311301_111763251	3300032160	Peatlands Soil	MSKSHYFERLLESTGMIARHADFPGKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSFQTAS
Ga0311301_126806071	3300032160	Peatlands Soil	LETAVLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGEMLQEILLGISFQRASRTVSSAETWNDATS
Ga0335081_113313892	3300032892	Soil	MSDSRFFERLLETAGLIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFQRAEG
Ga0326728_105353721	3300033402	Peat Soil	MSDSRFFERLLETAGLIARHADFPGKRQVVERCREEIEDLTRSGVITSDQGETLQEILLGVSFQRAS
Ga0326727_103037502	3300033405	Peat Soil	MSDSRFFERLLKTAGMIARHADFPGKRQVVERCREEVEDLTRSGVITSDQGETLQEILLGVSFQRAS
Ga0326727_110774751	3300033405	Peat Soil	MSNSHYFERLLRSAGLIARHADFPDKRQVVERCREEVEDLTSSGVISSAQGETLQEILL
Ga0371489_0336061_2_196	3300033755	Peat Soil	SHYFERLLRSAGLIARHADFPDKRQVVERCREEVEDLTSSGVISSAQGETLQEILLGVSLQTAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076758

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences