Metagenome Family F076743

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076743
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	47 residues
Representative Sequence	KLLHEISRIAEQALDRARKVKEEGTPAVQSAIERLNRLERDVSALV
Number of Associated Samples	87
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.71 %
% of genes near scaffold ends (potentially truncated)	96.58 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.359 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (35.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.991 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.46% β-sheet: 0.00% Coil/Unstructured: 40.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13401	AAA_22	10.26
PF13646	HEAT_2	6.84
PF00719	Pyrophosphatase	5.13
PF01592	NifU_N	4.27
PF00582	Usp	2.56
PF02641	DUF190	2.56
PF00589	Phage_integrase	1.71
PF07690	MFS_1	1.71
PF04608	PgpA	1.71
PF00488	MutS_V	1.71
PF14057	GGGtGRT	1.71
PF02627	CMD	0.85
PF00120	Gln-synt_C	0.85
PF02621	VitK2_biosynth	0.85
PF04023	FeoA	0.85
PF03600	CitMHS	0.85
PF07732	Cu-oxidase_3	0.85
PF12833	HTH_18	0.85
PF00350	Dynamin_N	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	5.13
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	4.27
COG1993	PII-like signaling protein	Signal transduction mechanisms [T]	2.56
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	1.71
COG1193	dsDNA-specific endonuclease/ATPase MutS2	Replication, recombination and repair [L]	1.71
COG1267	Phosphatidylglycerophosphatase A	Lipid transport and metabolism [I]	1.71
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.85
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.85
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	0.85
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.85
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.85

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.36 %
Unclassified	root	N/A	25.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.36 %
Unclassified	root	N/A	25.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.36 %
Unclassified	root	N/A	25.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	56.41 %
Unclassified	root	N/A	25.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	53.85 %
Unclassified	root	N/A	25.64 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.71 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	1.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	53.85 %
Unclassified	root	N/A	25.64 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	1.71 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → environmental samples	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	53.85 %
Unclassified	root	N/A	25.64 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	1.71 %
Firmicutes bacterium CAG:94	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → environmental samples → Firmicutes bacterium CAG:94	0.85 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.85 %

Name	Rank	Taxonomy	Distribution
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	40.17 %
Unclassified	root	N/A	25.64 %
Geothrix	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	1.71 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.85 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.85 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.85 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.85 %
Firmicutes bacterium CAG:94	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → environmental samples → Firmicutes bacterium CAG:94	0.85 %

Name	Rank	Taxonomy	Distribution
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	40.17 %
Unclassified	root	N/A	25.64 %
Geothrix	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	1.71 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.85 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.85 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.85 %
unclassified Oscillospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae	0.85 %
Firmicutes bacterium CAG:94	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → environmental samples → Firmicutes bacterium CAG:94	0.85 %

Name	Rank	Taxonomy	Distribution
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	40.17 %
Unclassified	root	N/A	25.64 %
Geothrix	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	1.71 %
Oscillospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	0.85 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.85 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.85 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.85 %
Firmicutes bacterium CAG:94	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → environmental samples → Firmicutes bacterium CAG:94	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005712\|Ga0070764_10500686	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300009643\|Ga0116110_1246204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	573	Open in IMG/M
3300009762\|Ga0116130_1032477	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300009764\|Ga0116134_1147827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	830	Open in IMG/M
3300010379\|Ga0136449_100720524	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300012209\|Ga0137379_11325939	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300014155\|Ga0181524_10506672	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	512	Open in IMG/M
3300014160\|Ga0181517_10254394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	938	Open in IMG/M
3300014160\|Ga0181517_10538496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	588	Open in IMG/M
3300014160\|Ga0181517_10596920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	553	Open in IMG/M
3300014162\|Ga0181538_10344926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	802	Open in IMG/M
3300014200\|Ga0181526_10073354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2179	Open in IMG/M
3300014200\|Ga0181526_10264340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1097	Open in IMG/M
3300014489\|Ga0182018_10191259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1149	Open in IMG/M
3300014492\|Ga0182013_10025379	All Organisms → cellular organisms → Bacteria	5159	Open in IMG/M
3300014492\|Ga0182013_10355710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	800	Open in IMG/M
3300014492\|Ga0182013_10471681	Not Available	659	Open in IMG/M
3300014493\|Ga0182016_10313651	Not Available	955	Open in IMG/M
3300014493\|Ga0182016_10735094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	552	Open in IMG/M
3300014495\|Ga0182015_10852972	Not Available	571	Open in IMG/M
3300014501\|Ga0182024_10291513	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2162	Open in IMG/M
3300014501\|Ga0182024_10380814	All Organisms → cellular organisms → Bacteria → Acidobacteria	1832	Open in IMG/M
3300014638\|Ga0181536_10303529	Not Available	741	Open in IMG/M
3300014838\|Ga0182030_10366998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1525	Open in IMG/M
3300014838\|Ga0182030_10373590	Not Available	1506	Open in IMG/M
3300014838\|Ga0182030_10833496	Not Available	838	Open in IMG/M
3300014838\|Ga0182030_11104734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	687	Open in IMG/M
3300016294\|Ga0182041_10893092	Not Available	799	Open in IMG/M
3300017938\|Ga0187854_10418003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	561	Open in IMG/M
3300017942\|Ga0187808_10396816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	630	Open in IMG/M
3300018002\|Ga0187868_1143474	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	874	Open in IMG/M
3300018023\|Ga0187889_10288638	Not Available	728	Open in IMG/M
3300018025\|Ga0187885_10517415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	532	Open in IMG/M
3300018033\|Ga0187867_10676175	Not Available	563	Open in IMG/M
3300018034\|Ga0187863_10393191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	773	Open in IMG/M
3300018047\|Ga0187859_10762270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	553	Open in IMG/M
3300018085\|Ga0187772_10737356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	708	Open in IMG/M
3300019787\|Ga0182031_1240823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1493	Open in IMG/M
3300019788\|Ga0182028_1273503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1327	Open in IMG/M
3300022849\|Ga0224531_1017982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1571	Open in IMG/M
3300022850\|Ga0224552_1002102	All Organisms → cellular organisms → Bacteria	3026	Open in IMG/M
3300022872\|Ga0224526_1063777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	699	Open in IMG/M
3300022875\|Ga0224553_1057897	Not Available	830	Open in IMG/M
3300022877\|Ga0224527_1021286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1543	Open in IMG/M
3300022881\|Ga0224545_1061275	Not Available	531	Open in IMG/M
3300023068\|Ga0224554_1076892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	806	Open in IMG/M
3300023068\|Ga0224554_1104072	Not Available	651	Open in IMG/M
3300023088\|Ga0224555_1213741	Not Available	523	Open in IMG/M
3300023091\|Ga0224559_1135479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → environmental samples → Firmicutes bacterium CAG:94	886	Open in IMG/M
3300023091\|Ga0224559_1268817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	572	Open in IMG/M
3300023247\|Ga0224529_1071405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	541	Open in IMG/M
3300025507\|Ga0208188_1138981	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300026451\|Ga0247845_1082862	Not Available	522	Open in IMG/M
3300026502\|Ga0255350_1089317	Not Available	680	Open in IMG/M
3300027676\|Ga0209333_1199540	Not Available	528	Open in IMG/M
3300028268\|Ga0255348_1027268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1115	Open in IMG/M
3300028268\|Ga0255348_1077824	Not Available	567	Open in IMG/M
3300028560\|Ga0302144_10239009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	588	Open in IMG/M
3300028748\|Ga0302156_10217825	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	888	Open in IMG/M
3300028762\|Ga0302202_10200344	Not Available	1023	Open in IMG/M
3300028765\|Ga0302198_10055164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2394	Open in IMG/M
3300028785\|Ga0302201_10068214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1688	Open in IMG/M
3300028785\|Ga0302201_10187725	Not Available	865	Open in IMG/M
3300028788\|Ga0302189_10387104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	550	Open in IMG/M
3300028789\|Ga0302232_10469432	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300028798\|Ga0302222_10061572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1515	Open in IMG/M
3300028806\|Ga0302221_10437422	Not Available	570	Open in IMG/M
3300028860\|Ga0302199_1142304	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300028873\|Ga0302197_10188519	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	970	Open in IMG/M
3300028873\|Ga0302197_10326408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	688	Open in IMG/M
3300028882\|Ga0302154_10464921	Not Available	604	Open in IMG/M
3300029907\|Ga0311329_10151492	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300029907\|Ga0311329_10414127	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300029907\|Ga0311329_10622915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	712	Open in IMG/M
3300029907\|Ga0311329_10653191	Not Available	689	Open in IMG/M
3300029908\|Ga0311341_10087657	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300029908\|Ga0311341_10489385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	702	Open in IMG/M
3300029913\|Ga0311362_10655433	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300029916\|Ga0302148_1137904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	690	Open in IMG/M
3300029916\|Ga0302148_1234931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	517	Open in IMG/M
3300029917\|Ga0311326_10313815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	793	Open in IMG/M
3300029918\|Ga0302143_1093483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	706	Open in IMG/M
3300029919\|Ga0302141_1066811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	971	Open in IMG/M
3300029922\|Ga0311363_10037282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7925	Open in IMG/M
3300029922\|Ga0311363_11280903	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300029939\|Ga0311328_10845052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	607	Open in IMG/M
3300029945\|Ga0311330_10754720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	743	Open in IMG/M
3300029953\|Ga0311343_10125690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	2862	Open in IMG/M
3300029953\|Ga0311343_10506585	Not Available	1069	Open in IMG/M
3300029953\|Ga0311343_10690421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	855	Open in IMG/M
3300029955\|Ga0311342_10805275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	723	Open in IMG/M
3300029986\|Ga0302188_10206577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	829	Open in IMG/M
3300030004\|Ga0302186_10271998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	569	Open in IMG/M
3300030020\|Ga0311344_10221476	All Organisms → cellular organisms → Bacteria	1914	Open in IMG/M
3300030507\|Ga0302192_10196581	Not Available	873	Open in IMG/M
3300030519\|Ga0302193_10021297	All Organisms → cellular organisms → Bacteria	4605	Open in IMG/M
3300030519\|Ga0302193_10552856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	561	Open in IMG/M
3300030688\|Ga0311345_10446700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1136	Open in IMG/M
3300030688\|Ga0311345_11320941	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	516	Open in IMG/M
3300031236\|Ga0302324_100486612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1807	Open in IMG/M
3300031524\|Ga0302320_11631629	Not Available	625	Open in IMG/M
3300031524\|Ga0302320_11636072	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300031672\|Ga0307373_10552064	Not Available	606	Open in IMG/M
3300031708\|Ga0310686_109179730	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300032515\|Ga0348332_13220004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	522	Open in IMG/M
3300032770\|Ga0335085_10786955	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300032770\|Ga0335085_11211182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	802	Open in IMG/M
3300032783\|Ga0335079_11855866	Not Available	585	Open in IMG/M
3300032895\|Ga0335074_10558950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1160	Open in IMG/M
3300032896\|Ga0335075_11285281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	627	Open in IMG/M
3300032896\|Ga0335075_11492532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	563	Open in IMG/M
3300032898\|Ga0335072_11246496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	656	Open in IMG/M
3300032898\|Ga0335072_11308868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	634	Open in IMG/M
3300032898\|Ga0335072_11674160	Not Available	532	Open in IMG/M
3300033818\|Ga0334804_060706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	1062	Open in IMG/M
3300033823\|Ga0334837_102294	Not Available	593	Open in IMG/M
3300033824\|Ga0334840_133812	Not Available	663	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.91%
Aquatic	Environmental → Aquatic	17.09%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	54.70%
Soil	Environmental → Terrestrial → Soil	27.35%
Freshwater	Environmental → Aquatic → Freshwater	17.09%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	54.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.37%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.42%
Loam	Environmental → Terrestrial → Soil → Loam	1.71%
Clay	Environmental → Terrestrial → Soil → Clay	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	54.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.85%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	33.33%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	16.24%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	8.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.42%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.42%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.71%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022849	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T100	Environmental	Open in IMG/M
3300022850	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 1-5	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300022875	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 10-14	Environmental	Open in IMG/M
3300022877	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T0	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300023247	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T50	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300026451	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T-25	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070764_105006861	3300005712	Soil	RLEAEIRKLLHEVSRIAEQALVRARKVKEDGEPAVQAELTRLARLENEVAMLRAH*
Ga0116110_12462041	3300009643	Peatland	QALDRARKVKEEGAPAVQAAMERLNGLEREVLALS*
Ga0116130_10324771	3300009762	Peatland	SRIAEQALDRARKVKEEGAPAVQAAMERLNGLEREVSALV*
Ga0116134_11478272	3300009764	Peatland	LHEISRIAEQALARARKVKEEGTPAVQSAIERLNRLERNVSALV*
Ga0136449_1007205241	3300010379	Peatlands Soil	RIAEQALDRARKIKEEGTPAVQSALARLDHLEKDVLTLF*
Ga0137379_113259391	3300012209	Vadose Zone Soil	HEISRIAEQALARARKVKEEGAPAVQMALNRLDSLEREISALV*
Ga0181524_105066721	3300014155	Bog	IRKLLHEVSRIAEQALDRARKVKEEGAPAVQAAMEWLNRIEREISALV*
Ga0181517_102543941	3300014160	Bog	IRKLLHEISRIAEQALGRARKVKEEGTPAVQAAVERLDRLERDVSALV*
Ga0181517_105384962	3300014160	Bog	LEVEIRKLLHEISRIAEQALDRARKVKEEGTPAVQSAIERLDRFEKDVSALV*
Ga0181517_105969201	3300014160	Bog	YEIGRVAEQALDLARKVKEEGTPAVQSAIERLNRLEREVSALAC*
Ga0181538_103449261	3300014162	Bog	RLEVEIRKLLHEISRIAEQALDRARKVKEEGAPAVQAAMEWLNRIEREISALV*
Ga0181526_100733541	3300014200	Bog	RKLLHEVRRIAEQALDRARKVKEKGAPAIQLEVERLDRFERDVCALV*
Ga0181526_102643402	3300014200	Bog	EIRKLLHEIRLIAEQALDRARKVKEEGSPAVQSAIERLNRLERDVSALV*
Ga0182018_101912591	3300014489	Palsa	EIRKLLHEVSRIAEQALDRARKVKEEGTPAVQSAIGRLNRIEKDVSALV*
Ga0182013_100253795	3300014492	Bog	EAEIRKLLHEISRIAEQALDRARKVKEEGAPAVQSAVERLDRLERDVSSLV*
Ga0182013_103557101	3300014492	Bog	LLHEISRIAEQALDRARKVKEEGTHAVQSAIERLNRLEQDVSALV*
Ga0182013_104716812	3300014492	Bog	DRLQVEIRKLLHEISRIAEQALDRARRVKEEGTPAVQSTIERLSRLERDVSVLF*
Ga0182016_103136511	3300014493	Bog	KLLHEISRIAEQALDRARRVKEEGTPAVQSTIERLSRLERDVSVLF*
Ga0182016_107350941	3300014493	Bog	LEVEIRKLLHEISRIAQQALDRARKVKEEGTSAVRSAIERLDRLERDVLAIV*
Ga0182015_108529721	3300014495	Palsa	IAEQALDRARKIKEEGAPAVQLAIERLNRLEREVSALV*
Ga0182024_102915131	3300014501	Permafrost	LQVEIRKLLHEISRIAEQALDRARKVKEEGTPAVQSAIERLNGLERDVFDTAP
Ga0182024_103808141	3300014501	Permafrost	ESRGRLEAEIRKLLHEVRRIAEQALDRARRVKEEGTPAVHSAIERLNRLERDVSALV*
Ga0181536_103035291	3300014638	Bog	ALDRARKVKEEGTPAVQSALALLSDLERDISTLV*
Ga0182030_103669981	3300014838	Bog	EISRIAEQALDRARKVKEEGTPAVQSAIERLNRIERDVST*
Ga0182030_103735901	3300014838	Bog	KLLHEISRIAEQALDRARKVKEEGTPAVQSAIERLNRLERDVSALV*
Ga0182030_108334962	3300014838	Bog	LHEISRIAEQALDRARRVKEEGTPAVQSTIERLSRLERDVSVLF*
Ga0182030_111047342	3300014838	Bog	EIRKLLYEISRIAEQALDRARKIKEEGAPAVQLAIERLNRLEREVSALV*
Ga0182041_108930921	3300016294	Soil	MDNLEVEIRKLLHEVSRIAEQALNNARKAREKGGPAVEAAVQRLDQLKRCLKRR
Ga0187854_104180031	3300017938	Peatland	RLEVEIRKLLHEVSRIAEQALDRARKVKEEGAPAVQAAMERLNGLEREVSALV
Ga0187808_103968162	3300017942	Freshwater Sediment	EQALDRARKVKEEGTPAVQAAIERLNRLEQEVSGLV
Ga0187868_11434741	3300018002	Peatland	ISRVAEQALDRARKVKEEGTPAIQSAVERLNRLERNVSALI
Ga0187889_102886381	3300018023	Peatland	VEIRKLLHEISRIAEQALDRARKVKEEGAPAVQSAVERLNRIEQEVLALV
Ga0187885_105174151	3300018025	Peatland	LHEISRIAEQALGRARKVKEEGTPAVQSAVERLNRLEREVSALA
Ga0187867_106761752	3300018033	Peatland	EIRKLLHEISRIAEQALDRARNVKEEGTPAVQSAVERLNRIERDVSALQSDPVQP
Ga0187863_103931911	3300018034	Peatland	RLEVEIRKLLHEVSRIAEQSLDRARKVKEEGAPAVQSAIERLDRLERGVLALV
Ga0187859_107622702	3300018047	Peatland	EIRKLLHEVSRIAEQALDRARKVKEEGAPAVQSAIERLNGLEREVSALF
Ga0187772_107373561	3300018085	Tropical Peatland	LLHEIGRVAEQALDWVRNVKKEGTPAVQSAIERLNRSERDVSALVSRSAEFVSQSGAATT
Ga0182031_12408231	3300019787	Bog	KLLHEVNRIAERALDRARKVKEEGTPAVESAMEKINRLERDVSALI
Ga0182028_12735031	3300019788	Fen	LDRARKVKEEGTPAVQSAIDRLDRLERNVSALVQPVQR
Ga0224531_10179823	3300022849	Soil	LHEVSRIAEQALDRARKVKEEGTPAVQSAIGRLNRIEKDVSALV
Ga0224552_10021021	3300022850	Soil	RRLLHEISRIAEQALDRARRVKEEGAPAVESAIERLSRLERDVSVLV
Ga0224526_10637771	3300022872	Soil	IAVQALDRARKVKEEGTPAVQSAIERLNRIERDVLS
Ga0224553_10578971	3300022875	Soil	EVSRIAEQALDRARKVKEEGTPAVQSAVERLSGLEREILARV
Ga0224527_10212863	3300022877	Soil	IRKLLHEVSRIAEQALDRARKVKEEGTPAVQSANGRLNRIERDVSALV
Ga0224545_10612752	3300022881	Soil	ISRIAEQALDRARRVKEEGTPAVQSAVERLNRLEQEVSALV
Ga0224554_10768921	3300023068	Soil	LEAEIRKLLHEISRIAEQALDRARKVKEEGTPAVQSAIERLNGLERDVSALV
Ga0224554_11040721	3300023068	Soil	LHEVSRIAVQALDRARKVKEEGEPAVQSAIERLNRFEQDVSALV
Ga0224555_12137411	3300023088	Soil	LEVEIRKLLHEIGRIAVEALDRAREIKEEGAPAVQSAIERLNHLEQEVSALVESRSCAEG
Ga0224559_11354792	3300023091	Soil	LLHEISRIAEQALDRARKVKEEGSPAIESAIERLDRLEQEVSALV
Ga0224559_12688172	3300023091	Soil	QVEIRKLLHEISRIAEQALDRARKVKEEGTHAVQSAIERLNRLEQDVSALV
Ga0224529_10714051	3300023247	Soil	IAEQALDRARKVKEEGTPAVQSAVERLNRIERDVSALV
Ga0208188_11389811	3300025507	Peatland	KLLHEISRIAEQALDRARKVKEEGAPAVQSAVERLNRIEQEVLALV
Ga0247845_10828621	3300026451	Soil	AEQALDRARKVKEEGTPAVQSAIDRLDRLERNVSALVQPVQR
Ga0255350_10893172	3300026502	Soil	SRIAEQALDWARKVKEEGAPAVQSAVERLNRLEREVSSLV
Ga0209333_11995401	3300027676	Forest Soil	EIRKLLHEISRIAEQALDRARKVKEEGATAVQSAVERLNRLEPEISALV
Ga0255348_10272682	3300028268	Soil	IRKLLHEISRIAEQALDRARKVKEEGTHAVQSAIERLNRLEQDVSALV
Ga0255348_10778242	3300028268	Soil	IRKLLHEISRIAEQALDRARKVKEEGTPAVQSGIEQLNRLERDVSALV
Ga0302144_102390092	3300028560	Bog	QALDRARKVKEEGTPAVESAMEKINRLERDVSALI
Ga0302156_102178251	3300028748	Bog	SRGRLEAEIRKLLHEVSHIAVQALDRARKVKEEGTPAVQSAIERLNRIERDVLT
Ga0302202_102003441	3300028762	Bog	DRLQVEIRKLLHEIGRIAEQALDRARRVKEEGTPAVQSAIERLNRLERDVSVLV
Ga0302198_100551643	3300028765	Bog	RIAEQALDRARRVKEEGAPAVQSAIERLSRLERDVSALV
Ga0302201_100682144	3300028785	Bog	KLLHEISRIAEQALDRARRVKEEGTPAVQSTIERLSRLERDVSVLF
Ga0302201_101877251	3300028785	Bog	EQALDRARKVKEEGAPAVQSAIERLDRLERDVSALV
Ga0302189_103871041	3300028788	Bog	IAEQALDRARKVKEEGAPAVQSAVERLDRLERDVSSLV
Ga0302232_104694321	3300028789	Palsa	RDRLEVEIRKLLHEISRIAEQALDRARKVKEEGTPAIQSAIERLNRLERDVSALV
Ga0302222_100615723	3300028798	Palsa	EQALDRARKIKEEGAPAVQLAIERLNRLEREVSALV
Ga0302221_104374221	3300028806	Palsa	LEAEIRKLLHEVSRIAEQALDRARKVKEEGTPAIQSAIGRLNRFEQEVSALV
Ga0302199_11423042	3300028860	Bog	SRIAVQALDRARKVKEEGTPAVQSAIERLNGLERDVSALV
Ga0302197_101885191	3300028873	Bog	KLLHEISRIAEQALDRARKVKEEGTPAVQSAIERLNGLERDVSALV
Ga0302197_103264081	3300028873	Bog	RLEAEIRKLLHEISRIAEQALDRARKVKEEGAPAVQSAVERLDRLERDVSSLV
Ga0302154_104649211	3300028882	Bog	LHEVSRIAEQALDRARKVKEEGTPAVQSAVERLSGLEREILARV
Ga0311329_101514923	3300029907	Bog	RIAEQALDRARKVKEEGTPAVQSGIEQLNRLERDVSALV
Ga0311329_104141271	3300029907	Bog	LHEISRIAEQALDRARKIKEEGTPAVQSALALLDHLEKDVLTLF
Ga0311329_106229152	3300029907	Bog	RDRLQVEIRKLLHEISRIAEQALDRARKVKEEGTPAVQSAIERLNRLERDVSALV
Ga0311329_106531912	3300029907	Bog	VEIRKLLHEISRIAEQALDWARKVKEEGAPAVQSAVERLNRLEREVSSLV
Ga0311341_100876573	3300029908	Bog	KLLHEISRIAEQALDRARRVKEEGAPAVQSAIERLSRLERDVSALV
Ga0311341_104893851	3300029908	Bog	LHEISRVAEQALDRARKVKEEGFPAVQSAVERLNRIERDVSALG
Ga0311362_106554332	3300029913	Bog	RLLHEISRIAQQALDRARKVKEEGTPAVQSAVERLSGLEREVLALVQPRSAE
Ga0302148_11379042	3300029916	Bog	DRARKIKEEGSPAVQSAIERLNRLEQEASGGLPIF
Ga0302148_12349311	3300029916	Bog	SRGRLEAEIRKLLHEISRIAEQALDRARRVKEEGAPAVQSAIERLSRLERDVSALV
Ga0311326_103138151	3300029917	Bog	SRGRLEAEIRKLLYEIGRVAEQALDRARKVKEEGTIAVQFEIERLSRLEKDVSELA
Ga0302143_10934832	3300029918	Bog	QALDRARKVKEEGSPAVQLEVERLNRIEQDVSALV
Ga0302141_10668113	3300029919	Bog	SRGRLEAEIRKLLHEISRIAEQALDRARKIKEEGTPAVQSAIERLDRLERDVSELA
Ga0311363_1003728211	3300029922	Fen	RLEVEIRKLLHEISRIAEQALDWARKVKEEGAPAVQSAVERLNRLEREVSSLV
Ga0311363_112809032	3300029922	Fen	HEISRIAQQALDRARKVKEEGTPAVQSAVERLSGLEREVLALVQPRSAE
Ga0311328_108450521	3300029939	Bog	SRGRLEAEIRKLLHEISRIAEQALDRARKVKEEGAPAVQSAVERLDRLERDVSSLV
Ga0311330_107547202	3300029945	Bog	GRLEAEIRKLLHEISRIAEQALDRARKVKEEGAPAVQSAVERLDRLERDVSSLV
Ga0311343_101256903	3300029953	Bog	LHEISRIAEQALDRARKVKEEGSPAVQSAIERLDRIEREISVLV
Ga0311343_105065852	3300029953	Bog	HEISRFAEQALDRARKLKEEGTPAVQSAIERLNRLERGVSALV
Ga0311343_106904211	3300029953	Bog	LLHEISRIAVQALDRARKVKEEGTPAVQSAIERLNRLEWDVSALV
Ga0311342_108052753	3300029955	Bog	IAEQALDRARKVKEEGAPAVQSAIERLNRIEQDISALV
Ga0302188_102065771	3300029986	Bog	EIRKLLHEISRIAEQALDRARIAKEEGTPAVLSALGRLNRLEREVSTLQGVMVVHDQN
Ga0302186_102719982	3300030004	Bog	EIRKLLHEVSRIAEQALDRARKVKEEGTPAVQSAIERLSRLERDVSALV
Ga0311344_102214761	3300030020	Bog	LEVEIRKLLHEVNRIAEQALDRARKVKEEGTPAVESAMEKINRLERDVSALI
Ga0302192_101965811	3300030507	Bog	RLEAEIRKLLHEVSRIAEQALDRARKVKEEGTPAVLSAVERLNRMEQDVLALA
Ga0302193_100212975	3300030519	Bog	IAEQALDRARKVKEEGSPAVQSAIERLDRIEREISVLV
Ga0302193_105528562	3300030519	Bog	DSRGRLEAEIRKLLHEISRIAEQALDRARKVKEEGAPAVQSAVERLDRLERDVSSLV
Ga0311345_104467001	3300030688	Bog	EIRKLLHEISRIAVQALDRARKVKEEGTPAVQSAIERLNRLEWDVSALV
Ga0311345_113209412	3300030688	Bog	KLLHEISRIAEQALDRARKVKEEGTHAVQSAIERLNRLEQDVSALV
Ga0302324_1004866121	3300031236	Palsa	RGRLEAEIRKLLHEVSRIAEQALDRARKVKEEGTPAIQSAIGRLNRFEQEVSALV
Ga0302320_116316291	3300031524	Bog	RDRLEVEIRKLLHEVNRIAVQALDRARKVKEEGAPAVQSAIERLNRFEQDVSALV
Ga0302320_116360721	3300031524	Bog	FAEQALDRARKVKEEGTPAVHSAIERLNGLERDVSALV
Ga0307373_105520641	3300031672	Soil	SRGHLEVEIRKLLHEISRIAEQALDRARKVKEEGTPAVQSAVERLNRFEQDVSALV
Ga0310686_1091797301	3300031708	Soil	ISRIAQQALDRARKVKEEGTPAVQSAVERLSGLEREVLALVQSRSVE
Ga0348332_132200041	3300032515	Plant Litter	RKLLHEISRIAEQALDRARKVKEEGTPAVQSAIERLNGLERDVFDTAPIWATRTK
Ga0335085_107869551	3300032770	Soil	IAELALDRARKIKEEGTPAVQSAIERLNRLEYEISALTSLSEPKR
Ga0335085_112111822	3300032770	Soil	EIRKLLHEVRRIAEQALDRARRVKEEGAPAVQAAIERLDRLERDVSALV
Ga0335079_118558661	3300032783	Soil	VEIRKLLHEVSRIAEQALGRARKVKEEGTPAVQAALERLDRLQMDVSALV
Ga0335074_105589501	3300032895	Soil	IRKLLHEVNRVAEQALERARRIKEDGTPAVQQAMERLDRLEQEISALV
Ga0335075_112852812	3300032896	Soil	VEIRKLLHEISRIAEQALDRARKVKEEGTPAVQAAIERLNRFEQEVSALMWL
Ga0335075_114925322	3300032896	Soil	EQALDRARKVKEEGTPAVQSAIERLNRFEQEVSALV
Ga0335072_112464962	3300032898	Soil	LEVEIRKLLHEISRIAEQALDRARKVKEEGTPAVKAALEQLDRLEADVSALVQ
Ga0335072_113088682	3300032898	Soil	YEISRIAEHALDKARKVKEEGTPAVQSAVERLNRLERDVAELCCPSGQK
Ga0335072_116741602	3300032898	Soil	EIRKLLHEISHFAEQALERARKVKAEGAPAVLAAVERLNRLERRVLVLYRPSAEE
Ga0334804_060706_910_1056	3300033818	Soil	LLHEVSRIAEQALDRARKIKEEGSPAVQSAIERLNRLEQEASGGLPIF
Ga0334837_102294_28_186	3300033823	Soil	LEVEIRKLLHEISRIAEQALDRARKLKEEGTPAVQSAVERLNRLERDVSALV
Ga0334840_133812_2_133	3300033824	Soil	HEISRIAEQALGRARKVKEEGTPAVQSAVERLNRLEREVSALA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076743

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences