Metagenome / Metatranscriptome Family F076733

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076733
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	67 residues
Representative Sequence	MTSPSSWYGAAHNWRMRAAETRALADEMKEAEPKAIMLRIAADYEKLAEWAEKNSVPWWDKKRVVSK
Number of Associated Samples	51
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.38 %
% of genes near scaffold ends (potentially truncated)	26.50 %
% of genes from short scaffolds (< 2000 bps)	90.60 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (73.504 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.624 % of family members)
Environment Ontology (ENVO)	Unclassified (50.427 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (84.615 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.05% β-sheet: 0.00% Coil/Unstructured: 38.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF05532	CsbD	2.56
PF13185	GAF_2	2.56
PF00589	Phage_integrase	0.85
PF07883	Cupin_2	0.85
PF13505	OMP_b-brl	0.85
PF16517	Nore1-SARAH	0.85
PF04226	Transgly_assoc	0.85
PF13493	DUF4118	0.85
PF12833	HTH_18	0.85
PF07045	DUF1330	0.85
PF13176	TPR_7	0.85
PF11154	DUF2934	0.85
PF00657	Lipase_GDSL	0.85
PF12849	PBP_like_2	0.85
PF01068	DNA_ligase_A_M	0.85
PF02668	TauD	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	2.56
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.85
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.85
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.85
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.50 %
All Organisms	root	All Organisms	26.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.50 %
cellular organisms	root	All Organisms → cellular organisms	26.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.55 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.71 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.42 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.56 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.71 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.50 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.56 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1.71 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.85 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.50 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1.71 %
unclassified Dyella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella	0.85 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.85 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.50 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1.71 %
Microvirga sp. HBU67692	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. HBU67692	0.85 %
Dyella sp. OK004	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella → Dyella sp. OK004	0.85 %
Bradyrhizobium sp. NAS96.2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS96.2	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10000924	Not Available	7203	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10009353	All Organisms → cellular organisms → Bacteria	2698	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10033586	Not Available	1378	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10036959	Not Available	1304	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10102029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	707	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10097073	Not Available	623	Open in IMG/M
3300005332\|Ga0066388_100481599	All Organisms → cellular organisms → Bacteria → Proteobacteria	1879	Open in IMG/M
3300005332\|Ga0066388_100792833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1541	Open in IMG/M
3300005332\|Ga0066388_101665915	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300005332\|Ga0066388_102330407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	969	Open in IMG/M
3300005332\|Ga0066388_102817279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300005332\|Ga0066388_103428039	Not Available	810	Open in IMG/M
3300005332\|Ga0066388_103711262	Not Available	779	Open in IMG/M
3300005332\|Ga0066388_104405708	Not Available	717	Open in IMG/M
3300005332\|Ga0066388_104518967	Not Available	708	Open in IMG/M
3300005332\|Ga0066388_105591011	Not Available	636	Open in IMG/M
3300005332\|Ga0066388_105639156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	634	Open in IMG/M
3300005332\|Ga0066388_107343069	Not Available	553	Open in IMG/M
3300005332\|Ga0066388_108174093	Not Available	522	Open in IMG/M
3300005363\|Ga0008090_10006822	Not Available	733	Open in IMG/M
3300005363\|Ga0008090_15582136	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300005363\|Ga0008090_15864183	Not Available	762	Open in IMG/M
3300005764\|Ga0066903_100592390	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300005764\|Ga0066903_100969876	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300005764\|Ga0066903_101419782	All Organisms → cellular organisms → Bacteria → Proteobacteria	1305	Open in IMG/M
3300005764\|Ga0066903_101772190	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300005764\|Ga0066903_102076739	Not Available	1093	Open in IMG/M
3300005764\|Ga0066903_102112870	Not Available	1084	Open in IMG/M
3300005764\|Ga0066903_102561232	Not Available	988	Open in IMG/M
3300005764\|Ga0066903_102817028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300005764\|Ga0066903_103073097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	904	Open in IMG/M
3300005764\|Ga0066903_103780256	Not Available	814	Open in IMG/M
3300005764\|Ga0066903_106099088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	631	Open in IMG/M
3300005764\|Ga0066903_106436691	Not Available	612	Open in IMG/M
3300005764\|Ga0066903_107302149	Not Available	571	Open in IMG/M
3300005764\|Ga0066903_108309351	Not Available	530	Open in IMG/M
3300005764\|Ga0066903_108798063	Not Available	513	Open in IMG/M
3300006050\|Ga0075028_100554178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300009792\|Ga0126374_10397291	Not Available	962	Open in IMG/M
3300010046\|Ga0126384_12154746	Not Available	536	Open in IMG/M
3300010048\|Ga0126373_10859376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS96.2	970	Open in IMG/M
3300010360\|Ga0126372_11248552	Not Available	769	Open in IMG/M
3300010361\|Ga0126378_11496111	Not Available	765	Open in IMG/M
3300010361\|Ga0126378_11838643	Not Available	689	Open in IMG/M
3300010366\|Ga0126379_10454815	Not Available	1342	Open in IMG/M
3300010366\|Ga0126379_13169096	Not Available	551	Open in IMG/M
3300010376\|Ga0126381_104710780	Not Available	525	Open in IMG/M
3300010398\|Ga0126383_11588435	Not Available	743	Open in IMG/M
3300010863\|Ga0124850_1060739	Not Available	1168	Open in IMG/M
3300012971\|Ga0126369_10847442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	998	Open in IMG/M
3300016270\|Ga0182036_10769593	Not Available	783	Open in IMG/M
3300016294\|Ga0182041_10675378	Not Available	914	Open in IMG/M
3300016294\|Ga0182041_10818207	Not Available	833	Open in IMG/M
3300016294\|Ga0182041_11432031	Not Available	635	Open in IMG/M
3300016319\|Ga0182033_10286605	Not Available	1353	Open in IMG/M
3300016319\|Ga0182033_10590646	Not Available	964	Open in IMG/M
3300016319\|Ga0182033_11796268	Not Available	556	Open in IMG/M
3300016319\|Ga0182033_11944282	Not Available	535	Open in IMG/M
3300016319\|Ga0182033_12071851	Not Available	519	Open in IMG/M
3300016341\|Ga0182035_10576358	Not Available	970	Open in IMG/M
3300016371\|Ga0182034_10455275	Not Available	1060	Open in IMG/M
3300016371\|Ga0182034_12055602	Not Available	504	Open in IMG/M
3300016387\|Ga0182040_11160005	Not Available	649	Open in IMG/M
3300016387\|Ga0182040_11175100	Not Available	645	Open in IMG/M
3300016404\|Ga0182037_10097213	Not Available	2110	Open in IMG/M
3300016445\|Ga0182038_12127693	Not Available	509	Open in IMG/M
3300017974\|Ga0187777_11344659	Not Available	526	Open in IMG/M
3300018032\|Ga0187788_10229007	Not Available	730	Open in IMG/M
3300018058\|Ga0187766_10038905	Not Available	2777	Open in IMG/M
3300021560\|Ga0126371_10046362	Not Available	4144	Open in IMG/M
3300021560\|Ga0126371_10107787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2787	Open in IMG/M
3300021560\|Ga0126371_10179905	Not Available	2198	Open in IMG/M
3300021560\|Ga0126371_10309109	Not Available	1709	Open in IMG/M
3300021560\|Ga0126371_10403996	Not Available	1508	Open in IMG/M
3300021560\|Ga0126371_10566217	Not Available	1285	Open in IMG/M
3300021560\|Ga0126371_11092997	Not Available	937	Open in IMG/M
3300021560\|Ga0126371_11249797	Not Available	877	Open in IMG/M
3300021560\|Ga0126371_13320655	Not Available	544	Open in IMG/M
3300027874\|Ga0209465_10189689	Not Available	1025	Open in IMG/M
3300031545\|Ga0318541_10110210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1486	Open in IMG/M
3300031546\|Ga0318538_10807953	Not Available	509	Open in IMG/M
3300031564\|Ga0318573_10568686	Not Available	610	Open in IMG/M
3300031573\|Ga0310915_10020779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3987	Open in IMG/M
3300031573\|Ga0310915_10307866	Not Available	1120	Open in IMG/M
3300031680\|Ga0318574_10502110	Not Available	711	Open in IMG/M
3300031797\|Ga0318550_10127606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1214	Open in IMG/M
3300031833\|Ga0310917_10142233	Not Available	1577	Open in IMG/M
3300031833\|Ga0310917_10378024	Not Available	962	Open in IMG/M
3300031879\|Ga0306919_10095249	Not Available	2083	Open in IMG/M
3300031879\|Ga0306919_11318876	Not Available	546	Open in IMG/M
3300031890\|Ga0306925_10568730	Not Available	1200	Open in IMG/M
3300031890\|Ga0306925_10672446	Not Available	1086	Open in IMG/M
3300031890\|Ga0306925_11609478	Not Available	631	Open in IMG/M
3300031896\|Ga0318551_10851094	Not Available	531	Open in IMG/M
3300031897\|Ga0318520_10800291	Not Available	591	Open in IMG/M
3300031910\|Ga0306923_10991454	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300031912\|Ga0306921_10348289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1732	Open in IMG/M
3300031912\|Ga0306921_10995265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella → Dyella sp. OK004	946	Open in IMG/M
3300031912\|Ga0306921_11565929	Not Available	718	Open in IMG/M
3300031942\|Ga0310916_10357376	Not Available	1241	Open in IMG/M
3300031942\|Ga0310916_10975694	Not Available	708	Open in IMG/M
3300031945\|Ga0310913_10975388	Not Available	595	Open in IMG/M
3300031947\|Ga0310909_10840122	Not Available	757	Open in IMG/M
3300031954\|Ga0306926_11646535	Not Available	734	Open in IMG/M
3300031954\|Ga0306926_12057094	Not Available	640	Open in IMG/M
3300032001\|Ga0306922_10121175	All Organisms → cellular organisms → Bacteria	2782	Open in IMG/M
3300032001\|Ga0306922_10752068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1022	Open in IMG/M
3300032001\|Ga0306922_11314535	Not Available	731	Open in IMG/M
3300032001\|Ga0306922_11703942	Not Available	624	Open in IMG/M
3300032059\|Ga0318533_10945072	Not Available	632	Open in IMG/M
3300032065\|Ga0318513_10246167	Not Available	866	Open in IMG/M
3300032076\|Ga0306924_10035253	Not Available	5464	Open in IMG/M
3300032076\|Ga0306924_10625958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1215	Open in IMG/M
3300032261\|Ga0306920_100476985	All Organisms → cellular organisms → Bacteria → Proteobacteria	1852	Open in IMG/M
3300032261\|Ga0306920_100516239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. HBU67692	1772	Open in IMG/M
3300032261\|Ga0306920_103873413	Not Available	546	Open in IMG/M
3300032261\|Ga0306920_104020007	Not Available	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.15%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.15%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.94%
Loam	Environmental → Terrestrial → Soil → Loam	25.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.09%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	25.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.56%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_1000092414	3300000597	Forest Soil	MTTPSSWYGLARECRMRAAETLARADEMNQAEPKAIMLRIAADYEQLAEWAEKNSVPWWVSALSSYSAAR*
AF_2010_repII_A1DRAFT_100093536	3300000597	Forest Soil	MGLAMTPPSSWYGLARECQMRAAEARARADEIKEIEPKAIMLRIAADYERIAEWAEKNSIPWWDKKRAS*
AF_2010_repII_A1DRAFT_100335861	3300000597	Forest Soil	MTDNTSYYLAARTWRMRAEEAHADEMKAVEXKAIMLRIAADYEKLADWAEKNSTPFWLKKREQSK*
AF_2010_repII_A1DRAFT_100369594	3300000597	Forest Soil	MTDNTSYYLAARGWRMRAEEVRTHADEMKEAEPKAIMLRIAADYEKLADWAEKNSTPFWLAKREQSK*
AF_2010_repII_A1DRAFT_101020292	3300000597	Forest Soil	MTDNTSYYLAARNWRMRAEETRALAEDMKEAEPRAMMLRIAAEYEKLAEWAEKNSTPFWLEKKRSQIA*
AF_2010_repII_A001DRAFT_100970731	3300000793	Forest Soil	MTDNTSYYLAARTWRMRAEEARAHADEMKAVEXKAIMLRIAADYEKLADWAEKNSTPWWDKKRVVR*
Ga0066388_1004815993	3300005332	Tropical Forest Soil	MTDNSSWYGAARNWRMRAAETRALADEMKETEPKAIMLRIAADYEKLADWAEKNSTPFWLEKKRNQSG*
Ga0066388_1007928332	3300005332	Tropical Forest Soil	MTDNTSYYLAARNWRMRAAETLALADEMKEPEPKAIMLRIAAEYERLAEWADKNSTPFWLEKKRSQIK*
Ga0066388_1016659151	3300005332	Tropical Forest Soil	MTSPSSWYGLARDCRMRAAEARARADEIKETEPKAIMLRIASDYEKLAEWAEKNSVPWWDKKRAPGGLR*
Ga0066388_1023304072	3300005332	Tropical Forest Soil	MGLAMTSLSSWYGLARECRMRAAETRARADEIKATEPKAIMLRIAADYEKVAEWAEKNSVPWWDKELANKVVPSH*
Ga0066388_1028172793	3300005332	Tropical Forest Soil	MGSRVVSASYYGDANHWRMRAAEILALADEMKQAEPEAIMRRIAADYERLAEWAEKDSTPWWDKRGATK*
Ga0066388_1034280392	3300005332	Tropical Forest Soil	MTDNTSYYLAARNWRMRAEETRVLAEDMKEAEPRAIMLRIVAEYERLAEWAEKNSTPFWLEKKRIQIG*
Ga0066388_1037112621	3300005332	Tropical Forest Soil	MTSPSSWYGLAHNCRMRAAEVRAQADEMKEAEPKAIMLRIAADYEKLAEWAEKNSVPWWDKKPTAL*
Ga0066388_1044057081	3300005332	Tropical Forest Soil	MTSPSSWYGAAHNWRMRAAETRALADEMKEAEPKAIMLRIAADYEKLAEWAEKNSVPWWDKKRVVSK*
Ga0066388_1045189671	3300005332	Tropical Forest Soil	MTSPSSWYSLARNCRMRAAETLALADEMKEAEPKAIMLRIVADYEKLADWAEKNSVPWWDKKRAS*
Ga0066388_1055910111	3300005332	Tropical Forest Soil	MTSPSSWYSLARECRMRAEETLARADEMREAEPKAIMLRIAADYEKVAEWAEENSVPWWDKKRAS*
Ga0066388_1056391561	3300005332	Tropical Forest Soil	MTFPSSWYAAAHNWRMRAAETRALVDEMKEAELKAIMLRIAADYEKLAEWAEKNSVPWWDKKR
Ga0066388_1073430691	3300005332	Tropical Forest Soil	MTSSSSSHYGDANTWRMRAAETRALADELKEIEPKAIMLRIAADYERLAEWAEKNSTPW
Ga0066388_1081740932	3300005332	Tropical Forest Soil	LAARNWRMRAEETRVLAEDMKEAEPRAIMLRIVAEYERLAEWADKNSTPFWLEKKRSQIK
Ga0008090_100068222	3300005363	Tropical Rainforest Soil	MGLSMTSPSSWYGLARECRMRAAETRARADEINAIEPKAIMLRIADDYEKVTEWAEKNSVPWWDKELANKVVPSSSRC*
Ga0008090_155821362	3300005363	Tropical Rainforest Soil	MGLAMTPPSSWYGLARECQMRAAEARARTDEIKEIEPKAIMLRIAADYERIAEWAEKNSIPWWDKKRAS*
Ga0008090_158641831	3300005363	Tropical Rainforest Soil	MTSQSYYGYAYHWRMRAAETRALADDMKETELKAIMLRIAADYDRLTEWAEKNSTPWWDKKRVS*
Ga0066903_1005923901	3300005764	Tropical Forest Soil	VTSSSHYGDARTWRMRAAEIRALADDMKEVEPKAIMLRIAADYDKLAEWAEKNSTPWWRAESE*
Ga0066903_1009698762	3300005764	Tropical Forest Soil	MTSSSSSHYGDARTWRMRAAETRALADELNAIEPKAIMLRIAADYDKLAEWAEKNSTPWWRAVVISHD*
Ga0066903_1014197822	3300005764	Tropical Forest Soil	MSSLSSWYGLAHNCRMRAAEARAQADEMKEAEPKAIMLRIAADYEKLAEWAEKNSVPWWDKKRAS*
Ga0066903_1017721902	3300005764	Tropical Forest Soil	MTSSSSSHYGDARTWHMRAAETRAIADELKEIEPKAIMLRIAADYERLAEWAEKNSTPWWRTVVISHD*
Ga0066903_1020767393	3300005764	Tropical Forest Soil	MTSPSSWYGAAHNWRMRAEETRAIAEEMKEAEPKAIMLRIAADYEKLAKWAEENSVPWWDKKQVVG*
Ga0066903_1021128701	3300005764	Tropical Forest Soil	MTSPSSWYAAAHNWRMRAAETLALADEMKEAEPKAIMVRIAADYEKLAEWAEKNSVPWWDKKRAS*
Ga0066903_1025612322	3300005764	Tropical Forest Soil	MAGSTRQGAHATAKPMTSPSSWYGLARECRMRAEETRARADEMKDAHPKAIMLRIADDYDRLAEWAEKNSVPWWDKKAAASK*
Ga0066903_1028170282	3300005764	Tropical Forest Soil	MTSPTSWYAAAHNWRMRAEETRAVAEEMKEAEPKAIMLRIAADYEKLAEWAEENSVPWWDKKQVVG*
Ga0066903_1030730973	3300005764	Tropical Forest Soil	MTDNTSYYLAARNWRMRAEETRVLAEDMKEAEPRAIMLRIVAEYERLAEWAEKNSTPFWLEKKRIQIK*
Ga0066903_1037802561	3300005764	Tropical Forest Soil	LEVRPMTSPSSWYGAAHNWRMRAEETRALADEFKEEPKAIMLRIAADYDRLAKWAEENSIPWWDKKRIVR*
Ga0066903_1060990881	3300005764	Tropical Forest Soil	MTSPSSWYALARECRMRAEEARTRADEMKEVHPKAIMLRIAADFEKVAEWAEENSVPWWDKKRVVR*
Ga0066903_1064366911	3300005764	Tropical Forest Soil	MTDNTSYYLAARTWRMRAEEAHADEMKAVEFKAIMLRIAADYEKLADWAQKNSTPFWLKKCEQSK*
Ga0066903_1073021491	3300005764	Tropical Forest Soil	MTSPTSWYGAAHNWRMRTEETRAIAEEMKEAEPKAIMLRIAADYEKLAEWAEENSIPWWDKK
Ga0066903_1083093512	3300005764	Tropical Forest Soil	MTDNTSYYLVARNWRMRAAETRALADDMKEAEPKAIMLRIAADYDKLAEWAENNSTPWWRVES
Ga0066903_1087980631	3300005764	Tropical Forest Soil	SPSSWYGAAHNWRMRAEETRALADEFREEEPKAIMFRIAADYDRLAKWAEENSVPWWDKKRVAR*
Ga0075028_1005541781	3300006050	Watersheds	MTSPSSWYGAAHTWRMRAAETLAHADEMKTVEPKAIMLRIAADYEKLAKWVEKNSVPWWDKKRSGS*
Ga0126374_103972912	3300009792	Tropical Forest Soil	MTDNTSYYLAARGWRMRAEEVRAHADEMKEAEPKAIMLRIAADYEKLADWAEKNSTPFWLEKREQSK*
Ga0126384_121547461	3300010046	Tropical Forest Soil	MTSPSSWYAAAHNWRMRAAETLALADEMKEAEPKAIMVRIAADYEKLAEWAEKNSVPWWDKRRVVS*
Ga0126373_108593762	3300010048	Tropical Forest Soil	MTYLARSRMTDNTSYYLAARGWRMRAEEVRTHADEMKEAEPKAIMLRIAADYEKLAEWAEKNSTPFWLEKPERSK*
Ga0126372_112485521	3300010360	Tropical Forest Soil	VLLGTALEFRPMTSPSSWYSLARNCRMRAAETLALADEMKEAEPKAIMLRIVADYEKLADWAEKNSVPWWDKKRAS*
Ga0126378_114961112	3300010361	Tropical Forest Soil	MTDNTSYYLAARGWRMRAEEVRAHADEMKEAEPKAIMLRIAADYEKLADWAEKNSTPFWLAKREQSK*
Ga0126378_118386431	3300010361	Tropical Forest Soil	MTSPSSWYGAAHNWRMRAEETRALADEFKEEPKAIMLRIAADYDRLAKWAEENSIPWWDKKRIVR*
Ga0126379_104548151	3300010366	Tropical Forest Soil	MTDNTSYYLAARGWRMRAEEVRSHADEMKEAEPKAIMLRIAADYEKLADWAEKNSTPFWLAKREQSK*
Ga0126379_131690961	3300010366	Tropical Forest Soil	SLSWYGLARECRMRAAETRARADDMKAAEPKAVMLRIVADYEELAEWAEKNSIPWWDKKPTAR*
Ga0126381_1047107801	3300010376	Tropical Forest Soil	MTSPTSWYGAAHNWRMRAEETRAIAEEMKEAEPKAIMLRIAADYEKLAEWAEENSVPWWDKKQVVS*
Ga0126383_115884351	3300010398	Tropical Forest Soil	MTDWSSLYGLARQYRMRAVEARAQADEMKEAQPKAIMLRIAADYEELAEWAEKNSTPFWRNKNPVFPSK*
Ga0124850_10607391	3300010863	Tropical Forest Soil	MTDNTSYYLAARGWRMRAEEVRAHADEMKEAEPKAIMLRIAADYEKLADWAEKNSTPFWLKKPEQSK*
Ga0126369_108474423	3300012971	Tropical Forest Soil	MTSPSSWYGAANNWRMRAEETRAIAEEMKEAEPKAIMLRIAADYEKLAEWAEENSIPWWDKKQVVS*
Ga0182036_107695931	3300016270	Soil	RRGVTITGLPMTSPSSWYAAAHNWRMRAAETRALADEMKEAEPKAIMLRIAADYEKLAEWAEKISTPWWDKKQVASK
Ga0182041_106753782	3300016294	Soil	MTDNTSYYLDARAWRMRAEEARAHADEMKAVEPKAIMLRIAADYEKLADWAEKNSTPFWLKKREQSK
Ga0182041_108182072	3300016294	Soil	LEVRPMTSPTSWYGAAHNWRMRAEETRVLADEFQEEPAAIMLRIAADYDRLAKWAEENSVPWWDKKRVAR
Ga0182041_114320312	3300016294	Soil	SGQSALALSQRSFGGSALEVRPVTSPSSWYAAAHKWRMRAAETLALADEMKEAEPKAIMLRIVADYEKFAEWAEKNSVPWWDKKRSVSN
Ga0182033_102866053	3300016319	Soil	LEVRPVTSPSSWYAAAHKWRMRAAETLALADEMKEAEPKAIMLRIAADYERLAEWAEKNSVPWWDKKRSVS
Ga0182033_105906461	3300016319	Soil	LHHRGSSLARECRMRAAEACARADQMKEAQPKAIMLRIAADYEELAEWAEKNSIPWWDKKRSVS
Ga0182033_117962681	3300016319	Soil	TGDRSFRVFRIGGPHMTLPSSWYGIARECRMRAAEIRARAHKLKEIEPKAIMLRITADYEKLAEWAEKNSTPRWNKKRAG
Ga0182033_119442821	3300016319	Soil	MTDNTSYYLAARGWRMRAEEVLAHADEMKEAEPKAIMLRIAADYERLAEWAEKNSTPFWLEKSKQSK
Ga0182033_120718512	3300016319	Soil	MTSPSSWYGAARNWRMRAEETRALADEFEEEPKAIMLRIAADYDRLAKWAEENSVPWWDKKR
Ga0182035_105763582	3300016341	Soil	MTSPTSWYGAAHNWRMRAEETRVLADEFQEEPAAIMLRIAADYDRLAKWAEENSVPWWDKKRSVG
Ga0182034_104552751	3300016371	Soil	RAHWLSANAVLGGSALEVRPMTSPTSWYGAAHNWRMRAEETRVLADEFQEEPAAIMLRIAADYDRLDKWAEENSVPWWDKKRVAR
Ga0182034_120556022	3300016371	Soil	MTSPSSWYAAARDWRMRAAETRARAEEIKEIEPKAIMLRIAADYERLAEWAEKNSVPWWDKKRKDKRHAEGAWW
Ga0182040_111600051	3300016387	Soil	MTSPSSWYGLARDCGMRAAETRARADDMREAEPKAIMLRIAADYEELGEWTEKNSIPWWDKEQSVSNK
Ga0182040_111751002	3300016387	Soil	WFRLARECRMRAAETRAHADEMKEAEPKAIMLRIATDYEELAEWAEKNSIPWWDKKLSVS
Ga0182037_100972131	3300016404	Soil	SPSSWFSLARECQMRAAETRARAEEMKEVETKAIMLRIAADYERLAEWAEKNSVPWWDKKRSVS
Ga0182038_121276931	3300016445	Soil	MTDNTSYYLAARGWRMRAEEARAHADEMKAVEPKAIMLRIAADYERLAEWAEKNSTPFWLEKREQSK
Ga0187777_113446592	3300017974	Tropical Peatland	SSWYGFARECRMRAAEILARADEMKAAKPKVLMLEMAADYEKLAEWAEKTPRCSRSRRIS
Ga0187788_102290071	3300018032	Tropical Peatland	MTDNTSYYLAARNWRMRAAETRALADDMKEAEPKAMMLRIAAEYEKLAEWAEKNSTPFW
Ga0187766_100389055	3300018058	Tropical Peatland	MTYSSSWYGFARECRMRAAEILARADEMKAAKPKVLMLEMAADYEKLAEWAEKTPRCSRSRRIS
Ga0126371_100463626	3300021560	Tropical Forest Soil	MTYSSSWYGIARECRMRAAEARARADEMKEAQPKAIMLGIAADYEELADWFEKNSIPWWDKKPTAR
Ga0126371_101077874	3300021560	Tropical Forest Soil	MTDNTSYYLAARGWRMRAEEVRTHADEMKEAEPKAIMLRIAADYEKLADWAEKNSTPFWLAKREQSK
Ga0126371_101799055	3300021560	Tropical Forest Soil	MTSSSSSHYGDARTWHMRAAETRAIADELKEIEPKAIMLRIAADYERLAEWAEKNSTPWWRTVVISHD
Ga0126371_103091091	3300021560	Tropical Forest Soil	MTSPSSFYLDARGWRMRAEEVRAHADEMKEAEPKAIMLRIAADYEKLAEWAEKNSTPFWLQKNPVFPSK
Ga0126371_104039963	3300021560	Tropical Forest Soil	MTSPSSWYGLAHNCRMRAAEVRAQADEMKEAEPKAIMLRIAADYEKLAEWAEKNSVPWWDKKPTAL
Ga0126371_105662171	3300021560	Tropical Forest Soil	MTSPSSWYAAAHNWRMRAAETLALADEMKEAEPKAIMVRIAADYEKLAEWAEKN
Ga0126371_110929973	3300021560	Tropical Forest Soil	MTDNTSYYLAARTWRMRAEEAHADEMKAVEFKAIMLRIAADYEKLADWAEKNSTPFWLKKREQSK
Ga0126371_112497971	3300021560	Tropical Forest Soil	MTSSSSSHYGDAHTWRMRAAETRALADELKEIEPKAIMLRIAADYERLAEWAEKNSTPWWRAVVISHD
Ga0126371_133206551	3300021560	Tropical Forest Soil	MTSPSSWYGAARNWRMRAEETRALAEEFRDEEPKAIMFRIAADYDRLAKWAEENSVPWWDKKRVVS
Ga0209465_101896891	3300027874	Tropical Forest Soil	MTSPSSWYAAAHNWRMRAAETLALADEMKEAEPKAIMVRIAADYEKLAEWAEKNSIPWWDKKRAS
Ga0318541_101102102	3300031545	Soil	MTSPSSWYGLARECRMRGAETRARADGMKEAQPKAIMLRIAADYEELAECAEKNSVPWRDKKRGVR
Ga0318538_108079531	3300031546	Soil	ALMKSPSSWYSLARECRMRAEETRARADEMKEAHPKAIMLRIAADYEELAEWAEKNSIPWWDKKRSVR
Ga0318573_105686862	3300031564	Soil	TRRRIPMTSPSSWFSLARECQMRAAETRARADEMKEVEPKAIMLRIAADYERLAEWAEKNSVPWWDKKRSVS
Ga0310915_100207796	3300031573	Soil	VTSPSSWYAAAHKWRMRAAETLALADEMKEAEPKAIMLRIVADYEKFAEWAEKNSVPWWDKKRSVSN
Ga0310915_103078661	3300031573	Soil	MTSSSHYGDARTWRIDAEEARADADELKEAEPKAIMLRIAADYEKLAEWAEKISTPWWDKKQVASK
Ga0318574_105021101	3300031680	Soil	MTSQSSWYQAARNWRMRAEEARAHADEMKEAEPKAIMLRIAADYDKLADWAEKN
Ga0318550_101276061	3300031797	Soil	YGLARECRMRGAETRARADGMKEAQPKAIMLRIAADYEELAECAEKNSVPWRDKKRSVR
Ga0310917_101422334	3300031833	Soil	MTSPSSWYGAARNWRMRAEETRALADEFEEEPKAIMLRIAADYDRLAKWAEENSVPWWDKKRSVG
Ga0310917_103780241	3300031833	Soil	ERRGVTITGLPMTSPSSWYAAAHNWRMRAAETRALADEMKEAEPKAIMLRIAADYEKLAEWAEKISTPWWDKKQVASK
Ga0306919_100952493	3300031879	Soil	MTSQSSWYQAARNWRMRAEEARAHADEMKEAEPKAIMLRIAADYDKLADWAEKNSTPFWRTKNPIFPSK
Ga0306919_113188761	3300031879	Soil	MTDNTSYYLAARGWRMRAEEVLAHADEMKEAEPKAIMLRIAADYERLDDWAEKNSTPFWLAKREQSK
Ga0306925_105687303	3300031890	Soil	MTSPTSWYGAAHNWRMRAEETRALADEFQEEPKTIMLRIAADYDRLAKWAEENSVPWWDKKRVVR
Ga0306925_106724461	3300031890	Soil	LEVRPVTSPSSWYAAAHKWRMRAAETLALADEMKEAEPKAIMLRIVADYEKFAEWAEKNSVPWWDKKRSVSN
Ga0306925_116094783	3300031890	Soil	MTDNTSYYLSARSWRMRADEVRAHADEMKEAEPKAIMLRIAADYERLADWAEKNSTPFWLEKREQ
Ga0318551_108510943	3300031896	Soil	ILSRMTSPSSWYAAARDWRMRAAETRARADEMTEVEPKAIMLRIAADYEKLAEWAEKNSVPWWDKKRSVS
Ga0318520_108002912	3300031897	Soil	VGCSALKARPITSPSSWYGAARNWRMRAAETRALADEMKVDEPKVIMLRIAADYERLAEWAEKNSIPWWDKKRVAR
Ga0306923_109914542	3300031910	Soil	MTSRSSWYGLARDCGMRAAETRARADDMREAEPKAIMLRIAADYEELGEWTEKNSIPWWDKEQSVSNK
Ga0306921_103482894	3300031912	Soil	VTSPSSWYAAAHKWRMRAAETLALADEMKEAEPKAIMLRIVADYEKFAEWAEKNSVPWWDKKRSV
Ga0306921_109952652	3300031912	Soil	MTSPTSWYGAAHNWRMRAEETRVLADEFQEEPAAILLRIAADYEKLAEWVEKNSVPWWAKKRIVSK
Ga0306921_115659291	3300031912	Soil	TSSSSSHYGDAHAWRMRAAETRALADELKEIEPKAIMLRIAADYERLAEWAEKNSTPWRRAVVISHD
Ga0310916_103573764	3300031942	Soil	VTSPSSWYAAAHKWRMRAAETLALADEMKEAEPKAIMLRIVADYEKFAEWAEKNSVPWWDKKRSVR
Ga0310916_109756941	3300031942	Soil	ALEVRPMTSPTSWYGAAHNWRMRAEETRVLADEFQEEPAAIMLRIAADYDRLAKWAEENSVPWWDKKRVAR
Ga0310913_109753881	3300031945	Soil	MTDNTSYYLAARGWRMRAEEARAHADEMKAVEPKAIMLRIAADYEKLADWAEKNSTPFWLAKREQSK
Ga0310909_108401221	3300031947	Soil	MSLQSSWYALARECRMRAAEARARADEMKEVQPKAIMLRIATEYEELAEWAEENSVRWWDKKRSVR
Ga0306926_116465352	3300031954	Soil	MTDNTSYYLAARTWRMRAEEARAHADEMKAVEPKAIMLRIAADYEKLADWAEKNSTPFWLAKREQSK
Ga0306926_120570942	3300031954	Soil	MTCPTSWYGAAHNWRMRAEETRALADEFQEEPAAIMLRIAADYDRLAKWAEENSVPWWDKKRVAR
Ga0306922_101211753	3300032001	Soil	MTSPSSWYGAARNWRMRAEETRALADEFEEEPKAIMLRIAADYDRLAKWAEENSVPWWDKKRVAR
Ga0306922_107520682	3300032001	Soil	MTSPSSWYGLARECRMRGAETRARADGMKEAQPKAIMLRIAADYEELAECAEKNSVPWRDKKRSVR
Ga0306922_113145352	3300032001	Soil	MTSKSSWYSLARECHARRRNRARADEMKEVQPKAIMLRIAADYEELAEWAEKNSIPWWDKKLSVSK
Ga0306922_117039423	3300032001	Soil	MTDNTSYYLSARSWRMRADEVRAHADEMKEAEPKAIMLRIAADYEKLADWAEKNSTPFWLAKREQSK
Ga0318533_109450721	3300032059	Soil	MTSPTSWYGAAHNWRMRAEETRVLADEFQEEPAAIMLRIAADYDRLAKWAEENSVPWWDKKRVAR
Ga0318513_102461672	3300032065	Soil	MTSPSSFYGLARECRMRGAETRARADGMKEAQPKAIMLRIAADYEELAECAEKNSVPWRDKKRSVR
Ga0306924_100352536	3300032076	Soil	MTSPSSWFSLARECQMRAAETRARADEMKEVEPKAIMLRIAADYERLAEWAEKNSVPWWDKKRSVS
Ga0306924_106259581	3300032076	Soil	SWYGLARECRMRGAETRARADGMKEAQPKAIMLRIAADYEELAECAEKNSVPWRDKKRSV
Ga0306920_1004769852	3300032261	Soil	MTLPSSWYGIARECRMRAAEIRARAHKLKEIEPKAIMLRITADYEKLAEWAEKNSTPRWNKKRAG
Ga0306920_1005162394	3300032261	Soil	MTSSSHYGDARTWRIDAEEARADADELKEAEPKAIMLRIAADYEKLVDWAEKNSIPWWDKKRAVSK
Ga0306920_1038734132	3300032261	Soil	MTSPSSWYSLARECRMRAEETRARADEMKEAQPKAIMLRIAADYEDLAKWAEENSVPWWDKKQVVS
Ga0306920_1040200071	3300032261	Soil	MTSPSSWYAAAHNWRMRGAETRALADEMKEAEPKAIMLRIAADYEELAEWAEKNSIPWWDKKRIAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076733

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences