Metagenome / Metatranscriptome Family F076721

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076721
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	84 residues
Representative Sequence	MNVSKPTVKRWGNAFSVVVGVIVVVLFSIASVKVLSYLVNAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Number of Associated Samples	71
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.65 %
% of genes near scaffold ends (potentially truncated)	52.99 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (79.487 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.915 % of family members)
Environment Ontology (ENVO)	Unclassified (58.120 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.795 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.57% β-sheet: 11.49% Coil/Unstructured: 37.93%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF09851	SHOCT	0.85
PF00805	Pentapeptide	0.85
PF04964	Flp_Fap	0.85
PF00239	Resolvase	0.85
PF12697	Abhydrolase_6	0.85
PF00083	Sugar_tr	0.85
PF03466	LysR_substrate	0.85
PF00589	Phage_integrase	0.85
PF13649	Methyltransf_25	0.85
PF07859	Abhydrolase_3	0.85
PF06568	DUF1127	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.85
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.85
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.85
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.85
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.85
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.49 %
All Organisms	root	All Organisms	20.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.49 %
cellular organisms	root	All Organisms → cellular organisms	20.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.09 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.56 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.49 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	5.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.56 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.49 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	5.13 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.56 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.49 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	5.13 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.56 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.49 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	5.13 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.56 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10083615	Not Available	798	Open in IMG/M
3300004633\|Ga0066395_10418166	Not Available	759	Open in IMG/M
3300005332\|Ga0066388_100490669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1865	Open in IMG/M
3300005332\|Ga0066388_100873761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1481	Open in IMG/M
3300005332\|Ga0066388_103084179	Not Available	851	Open in IMG/M
3300005332\|Ga0066388_104198446	Not Available	734	Open in IMG/M
3300005363\|Ga0008090_10148698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1531	Open in IMG/M
3300005764\|Ga0066903_100284340	All Organisms → cellular organisms → Bacteria → Proteobacteria	2597	Open in IMG/M
3300005764\|Ga0066903_101594428	Not Available	1237	Open in IMG/M
3300005764\|Ga0066903_105917850	Not Available	641	Open in IMG/M
3300005764\|Ga0066903_107141774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	578	Open in IMG/M
3300005764\|Ga0066903_108180711	Not Available	535	Open in IMG/M
3300005764\|Ga0066903_108204052	Not Available	534	Open in IMG/M
3300010047\|Ga0126382_11103010	Not Available	704	Open in IMG/M
3300010048\|Ga0126373_10327593	Not Available	1537	Open in IMG/M
3300010048\|Ga0126373_10425260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300010048\|Ga0126373_10712756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1062	Open in IMG/M
3300010358\|Ga0126370_11799248	Not Available	593	Open in IMG/M
3300010360\|Ga0126372_10298653	Not Available	1414	Open in IMG/M
3300010361\|Ga0126378_11859366	Not Available	685	Open in IMG/M
3300010361\|Ga0126378_12105999	Not Available	643	Open in IMG/M
3300010366\|Ga0126379_11082402	Not Available	907	Open in IMG/M
3300010376\|Ga0126381_101554779	Not Available	956	Open in IMG/M
3300010376\|Ga0126381_104964787	Not Available	510	Open in IMG/M
3300012948\|Ga0126375_10697496	Not Available	790	Open in IMG/M
3300012948\|Ga0126375_12097397	Not Available	502	Open in IMG/M
3300012971\|Ga0126369_12240033	Not Available	633	Open in IMG/M
3300012971\|Ga0126369_13141743	Not Available	541	Open in IMG/M
3300012971\|Ga0126369_13322090	Not Available	527	Open in IMG/M
3300016270\|Ga0182036_10246493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1335	Open in IMG/M
3300016294\|Ga0182041_10737736	Not Available	876	Open in IMG/M
3300016319\|Ga0182033_10031040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3415	Open in IMG/M
3300016319\|Ga0182033_10611578	Not Available	947	Open in IMG/M
3300016341\|Ga0182035_10120371	Not Available	1963	Open in IMG/M
3300016341\|Ga0182035_10886569	Not Available	786	Open in IMG/M
3300016341\|Ga0182035_11524995	Not Available	602	Open in IMG/M
3300016357\|Ga0182032_10129178	Not Available	1836	Open in IMG/M
3300016371\|Ga0182034_10306718	Not Available	1274	Open in IMG/M
3300016371\|Ga0182034_11319812	Not Available	629	Open in IMG/M
3300016404\|Ga0182037_11944080	Not Available	527	Open in IMG/M
3300016422\|Ga0182039_10380490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1193	Open in IMG/M
3300016422\|Ga0182039_10680449	Not Available	906	Open in IMG/M
3300017944\|Ga0187786_10407179	Not Available	592	Open in IMG/M
3300017974\|Ga0187777_11221916	Not Available	550	Open in IMG/M
3300017999\|Ga0187767_10124991	Not Available	743	Open in IMG/M
3300018058\|Ga0187766_10011146	All Organisms → cellular organisms → Bacteria	5161	Open in IMG/M
3300018058\|Ga0187766_10262054	Not Available	1109	Open in IMG/M
3300018060\|Ga0187765_10057961	Not Available	2013	Open in IMG/M
3300018433\|Ga0066667_11813845	Not Available	552	Open in IMG/M
3300018482\|Ga0066669_10583717	Not Available	978	Open in IMG/M
3300021560\|Ga0126371_10126620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2587	Open in IMG/M
3300021560\|Ga0126371_10241476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1917	Open in IMG/M
3300021560\|Ga0126371_11931619	Not Available	709	Open in IMG/M
3300026872\|Ga0207785_1026613	Not Available	505	Open in IMG/M
3300026896\|Ga0207730_1010321	Not Available	808	Open in IMG/M
3300026979\|Ga0207817_1022004	Not Available	686	Open in IMG/M
3300026997\|Ga0207784_1033831	Not Available	522	Open in IMG/M
3300027003\|Ga0207722_1013221	Not Available	942	Open in IMG/M
3300027035\|Ga0207776_1044027	Not Available	541	Open in IMG/M
3300027063\|Ga0207762_1066976	Not Available	518	Open in IMG/M
3300027516\|Ga0207761_1124477	Not Available	502	Open in IMG/M
3300027874\|Ga0209465_10187930	Not Available	1030	Open in IMG/M
3300031543\|Ga0318516_10512648	Not Available	688	Open in IMG/M
3300031543\|Ga0318516_10800380	Not Available	532	Open in IMG/M
3300031544\|Ga0318534_10241320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1043	Open in IMG/M
3300031545\|Ga0318541_10031722	Not Available	2623	Open in IMG/M
3300031545\|Ga0318541_10857944	Not Available	507	Open in IMG/M
3300031545\|Ga0318541_10858596	Not Available	506	Open in IMG/M
3300031546\|Ga0318538_10440515	Not Available	705	Open in IMG/M
3300031564\|Ga0318573_10360211	Not Available	781	Open in IMG/M
3300031573\|Ga0310915_10573169	Not Available	800	Open in IMG/M
3300031573\|Ga0310915_10609463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	773	Open in IMG/M
3300031573\|Ga0310915_10702360	Not Available	714	Open in IMG/M
3300031719\|Ga0306917_11452317	Not Available	528	Open in IMG/M
3300031736\|Ga0318501_10461298	Not Available	690	Open in IMG/M
3300031744\|Ga0306918_10934377	Not Available	675	Open in IMG/M
3300031744\|Ga0306918_11455652	Not Available	524	Open in IMG/M
3300031748\|Ga0318492_10571832	Not Available	602	Open in IMG/M
3300031768\|Ga0318509_10373574	Not Available	798	Open in IMG/M
3300031770\|Ga0318521_10250723	Not Available	1033	Open in IMG/M
3300031792\|Ga0318529_10555013	Not Available	533	Open in IMG/M
3300031819\|Ga0318568_10240660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1120	Open in IMG/M
3300031832\|Ga0318499_10173696	Not Available	841	Open in IMG/M
3300031879\|Ga0306919_10426903	Not Available	1018	Open in IMG/M
3300031880\|Ga0318544_10246785	Not Available	691	Open in IMG/M
3300031910\|Ga0306923_10287506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1879	Open in IMG/M
3300031910\|Ga0306923_10555214	Not Available	1294	Open in IMG/M
3300031912\|Ga0306921_11008190	Not Available	939	Open in IMG/M
3300031912\|Ga0306921_12113388	Not Available	596	Open in IMG/M
3300031941\|Ga0310912_10907114	Not Available	678	Open in IMG/M
3300031941\|Ga0310912_11497938	Not Available	508	Open in IMG/M
3300031946\|Ga0310910_11533752	Not Available	510	Open in IMG/M
3300031954\|Ga0306926_10531021	Not Available	1443	Open in IMG/M
3300031954\|Ga0306926_11440238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	797	Open in IMG/M
3300031954\|Ga0306926_12728360	Not Available	536	Open in IMG/M
3300032001\|Ga0306922_10161242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2401	Open in IMG/M
3300032001\|Ga0306922_10560176	Not Available	1214	Open in IMG/M
3300032035\|Ga0310911_10331023	Not Available	878	Open in IMG/M
3300032035\|Ga0310911_10416984	Not Available	777	Open in IMG/M
3300032035\|Ga0310911_10570449	Not Available	656	Open in IMG/M
3300032039\|Ga0318559_10221521	Not Available	872	Open in IMG/M
3300032055\|Ga0318575_10215959	Not Available	965	Open in IMG/M
3300032063\|Ga0318504_10384660	Not Available	668	Open in IMG/M
3300032076\|Ga0306924_10381323	Not Available	1615	Open in IMG/M
3300032076\|Ga0306924_10446001	Not Available	1478	Open in IMG/M
3300032076\|Ga0306924_10961999	Not Available	940	Open in IMG/M
3300032076\|Ga0306924_11131786	Not Available	851	Open in IMG/M
3300032090\|Ga0318518_10496639	Not Available	625	Open in IMG/M
3300032091\|Ga0318577_10409769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	647	Open in IMG/M
3300032261\|Ga0306920_100021059	All Organisms → cellular organisms → Bacteria	9093	Open in IMG/M
3300032261\|Ga0306920_100725441	Not Available	1463	Open in IMG/M
3300032261\|Ga0306920_100855082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1332	Open in IMG/M
3300032261\|Ga0306920_103184582	Not Available	615	Open in IMG/M
3300032261\|Ga0306920_103534255	Not Available	577	Open in IMG/M
3300033289\|Ga0310914_10095386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2550	Open in IMG/M
3300033289\|Ga0310914_10217791	Not Available	1708	Open in IMG/M
3300033289\|Ga0310914_10433649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1189	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.78%
Loam	Environmental → Terrestrial → Soil → Loam	17.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.13%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026896	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100836152	3300000597	Forest Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLTNIDDRWVPERKVPK*
Ga0066395_104181661	3300004633	Tropical Forest Soil	MKVSEPTVKRWGNAFSVVVFVIALMLFLIASVKVISYLVYAEGTVESYMSKSCSQSEQSGLEAKWEYGEGCLVNIDGRWVPQRKVPK*
Ga0066388_1004906693	3300005332	Tropical Forest Soil	MNVSKPTVKRWGNVNDTLSAVVGVIVVVLFLIASIKVISYLASAEDTVDRYMSKNCSELEQSGLEARWEYGKGCLVNIDGRWVPERKVPK*
Ga0066388_1008737613	3300005332	Tropical Forest Soil	MNVTEPTVKRWGNAFSVVVGVIVLVLFLIASVKVISYLVYAEGTVERYMSKSCSQSEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK*
Ga0066388_1030841791	3300005332	Tropical Forest Soil	MNVSKLTVERWGNAFSVVVGVIAVVLFLIASVKVISYLVYAEGAVERYMSKNCSQSEQSGLEAKWEYGKGCLVNIDGRWVSERKVPK*
Ga0066388_1041984462	3300005332	Tropical Forest Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWV
Ga0008090_101486983	3300005363	Tropical Rainforest Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSIASVKVLSYLVNAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK*
Ga0066903_1002843405	3300005764	Tropical Forest Soil	KRWGNAFSVVVGVIALVLFLIASVKVISYLVYAEDTVERFMSKNCSQAEQSGREAKWEYGEGCLVNIDGRWVPEREVPK*
Ga0066903_1015944283	3300005764	Tropical Forest Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVPERKVPK*
Ga0066903_1059178502	3300005764	Tropical Forest Soil	MNVSKPTVERWGNALSVVVGVIVVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK*
Ga0066903_1071417742	3300005764	Tropical Forest Soil	MNVTEPTVKRWGNAFSVVVGVIVLVLFLIASVKVISYLVYAEGTVERYMSKNCSQAEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0066903_1081807111	3300005764	Tropical Forest Soil	MKVSEPTVKRWGNAFSVVVGVIVLVLFLIASVKVISYLVYAEDTVERYMTKNCSQAVQSGLEAKWEYGEGCLVNIDGRWVPERKVPK*
Ga0066903_1082040522	3300005764	Tropical Forest Soil	NAFSVVVGVIAVVLFLIASVKVISYLVYAEGTVERYMSKICSQSEQSGLEAKWEYGKGCLVNIDGRWVPEQKVPK*
Ga0126382_111030101	3300010047	Tropical Forest Soil	MNVSKPTVERWGNAFSVVVGVIAVVLFLIASVKVISYLVYAEGAVERYMSKNCSQSGQSGLEAKWEYGKGCLVNIDGRWVSEREVPK*
Ga0126373_103275932	3300010048	Tropical Forest Soil	MKVSEPTVKRWGNAFSVVVFVIALMLFLIASVKVISYLVYAEGTVESYMSKSCSQSEQSGLEAKWEYGEGCLVNIDGQWVPQRKVPK*
Ga0126373_104252602	3300010048	Tropical Forest Soil	GEGAPVNVSKHTVERWGNAFSVVVGVIAVVLFLIASVKVISYLVYAEDTVERFMSKNCSQAEQSGLEAKWEYGEGCLININGRWVPEQKVPK*
Ga0126373_107127562	3300010048	Tropical Forest Soil	MNVSKPTISRRGNAFSAVAAVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPEKNPK*
Ga0126370_117992482	3300010358	Tropical Forest Soil	VVGVIALVLFLIASVKVISYLVYAEGTVERFMSKNCSQAEQSGREAKWEYGEGCLVNIDGRWVPEREVPK*
Ga0126372_102986531	3300010360	Tropical Forest Soil	MNVSEPTVKRWGNAFSVVVGVIALVLFLIASVKVISYLVYAEGTVESYMSKSCSQSEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK*
Ga0126378_118593661	3300010361	Tropical Forest Soil	MNVSKPTVSRWGNAFSAVVGVVVAVLFLIASVKVLSYLVNAEITVERYMSKTCSQLEQSGLEAKWEYGKGCLVNIDGRWVPEQKVPK*
Ga0126378_121059991	3300010361	Tropical Forest Soil	SEPTVKRWGNAFSVVVGVIALVLFLIASVKVISYLVYAEDTVERFMSKNCSQAEQSGLEAKWEYGEGCLINIDGRWVPEQKVPK*
Ga0126379_110824021	3300010366	Tropical Forest Soil	MNVSKPTVERWGNAFSVVVGVIAVVLFLIASVKVISYLVYAEGTVERYMSKICSQSEQSGLEAKWEYGKGCLVNIDGRWVPEQKVPK*
Ga0126381_1015547792	3300010376	Tropical Forest Soil	MNETKPTVKRWGNVNDTLSVVVGVIVVVLFLIASIKVVSYLAFAEDTVDRYMSKNCSELVEQSGLEAKWEYGKGCLVNIDGHWVPDRKVPK*
Ga0126381_1049647871	3300010376	Tropical Forest Soil	MKVSEPTVKRWENALSVVAGVIVLVLFLIASVKVISYLVYAEGAVERYMSKNCSQSEQSGLEAKWEYGEGCLVNIDGRWMPERKVPK*
Ga0126375_106974963	3300012948	Tropical Forest Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGLEAKWEYGKGCLVNIDGRWAPERKVPK
Ga0126375_120973972	3300012948	Tropical Forest Soil	LSACYCLCLSGSCEGAPMKVSEPTVKRWGNAFSVVVFVIALMLFLIASVKVISYLVYAEGTVESYMSKSCSQSEQSGLEAKWEYGEGCLVNIDGRWVPQRKVPK*
Ga0126369_122400331	3300012971	Tropical Forest Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPEKNPK*
Ga0126369_131417431	3300012971	Tropical Forest Soil	SLSACYCLRLSGSGERAPMKVSEPTVKRWGNAFSVVVGVIALVLFLIASVKVISYLVYAEDTVELFMSKNCSQAEQSGREAKWEYGEGCLVNIDGRWVPEREVPK*
Ga0126369_133220901	3300012971	Tropical Forest Soil	MKVSEPTVKRWGNAFSVVVFVIALMLFLIASVKVISYLVYAEGTVESYMSKSCSQSEQSGLEAKWEYGEGCLVNIDGR
Ga0182036_102464933	3300016270	Soil	MNVSKHTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVPERKVPK
Ga0182041_107377361	3300016294	Soil	PTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0182033_100310402	3300016319	Soil	MNVSKPTVSRWGNAFSAVVGVVVVALFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPEQKVPK
Ga0182033_106115781	3300016319	Soil	MNVSEPTVNRLGNAFSLVVGVIVVVLFLIASVKVISYLAYAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVP
Ga0182035_101203711	3300016341	Soil	MNASKPTISRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDG
Ga0182035_108865691	3300016341	Soil	MNVSEPTVNRLGNAFSLVVGVIVVVLFLIASVKVISYLAYAEDTVERYMSKNCAQAEQSGHEAKWEYGEGCLVNIDGRWVKRNVTH
Ga0182035_115249951	3300016341	Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDG
Ga0182032_101291783	3300016357	Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSSLVDAEDTVERYMSKNCSPLEQSGLEAKWEYGKGCLVNIAGRWVPEQNPK
Ga0182034_103067183	3300016371	Soil	MKVSEPTVKRWGNAFSVVVGVIVLVLFLISSVKVISYLVYAEDTVERYMSKNCAQAEQSGHEAKWEYGEGCLVNIDGRWVPDEKVR
Ga0182034_113198122	3300016371	Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0182037_119440801	3300016404	Soil	MNVSKPTVSRWGNAFSAVVGVVVVALFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRW
Ga0182039_103804903	3300016422	Soil	GRGAPMNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVPERKVPK
Ga0182039_106804491	3300016422	Soil	MQCDKAPNAFSAVVGVVVVVLFLIASVKVLSYLVDAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPEQKVPK
Ga0187786_104071792	3300017944	Tropical Peatland	MKVSEPIVKRWGNALSVVVGVIVLVLFLIASVKVISYLVYAEGTVEQYMSKNCSQLEQSGREAKWEYGEGCLVNIDGRWVPARKVPK
Ga0187777_112219161	3300017974	Tropical Peatland	MNVSKPTVSPWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGR
Ga0187767_101249911	3300017999	Tropical Peatland	LSLCLSSPGGGAPMNVSKPTVSPWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPERKVPK
Ga0187766_100111468	3300018058	Tropical Peatland	MNVSKPTVSPWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPERKVPK
Ga0187766_102620542	3300018058	Tropical Peatland	MKVSEPTVKRWGNAFSAVVGVIVLVLFLIASVKVIAYLVYAEGTVESYMSKNCSQSEQSGLEANWEYGEGCLVNIDGRWAPERKVPK
Ga0187765_100579613	3300018060	Tropical Peatland	MKVSEPTVKRWGNAFSAVVGVIVLVLFLIASVKVIAYLVYAEGTVESYMSKNCSQSEQSGLEAKWEYGEGCLVNIDGRWAPERKVPK
Ga0066667_118138451	3300018433	Grasslands Soil	MNVSKPTVKRWKNVNDTLSVVVGVIVVVLFLIASIKVISYLAFAEATVDRYMSKNCSELAQSGLEARWEYGKGCLVNIDGHWVPERKVPK
Ga0066669_105837172	3300018482	Grasslands Soil	MNVSKPTVKGWKNVNDTLSVVVGVIVVVLFLIASIKVISYLAFAEATVDRYMSKNCSELEQSGLEARWEYGKGCLVNIDGHWVPERKVPK
Ga0126371_101266203	3300021560	Tropical Forest Soil	MNVSKPTISRRGNAFSAVAAVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPEKNPK
Ga0126371_102414761	3300021560	Tropical Forest Soil	MKVSEPTVKRWGNTSSVVVGVIALVLFLIASVKVISYLVYAEDTVERFMSKNCSQAEQSGLEAKWEYGEGCL
Ga0126371_119316191	3300021560	Tropical Forest Soil	DTLSVVVGVIVVVLFLIASIKVISYLASAEDTVDRYMSKNCSELVEQSGLEAKWEYGKGCLVNIDGHWVPDRKVPK
Ga0207785_10266132	3300026872	Tropical Forest Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPERKVPK
Ga0207730_10103212	3300026896	Tropical Forest Soil	MNVSKPTVSRWGNAFSAVVGVVVVALFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPERKVPK
Ga0207817_10220042	3300026979	Tropical Forest Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPK
Ga0207784_10338311	3300026997	Tropical Forest Soil	MNVSKHTVKGWGNAFSVVVGVIVVVLFLVASTKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPERKVPK
Ga0207722_10132212	3300027003	Tropical Forest Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEGTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPERKVPK
Ga0207776_10440272	3300027035	Tropical Forest Soil	MKVSEPTVKRWGNAFSVVVGVIVLVLFLIASVKVISYLVYAEGTVESYMSKNCSQSEQSGLETKWEYGEGCLVNIDGRWVPERK
Ga0207762_10669761	3300027063	Tropical Forest Soil	MNVSKPTVSRWGNAFSAVVGVVAVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPARKVSK
Ga0207761_11244771	3300027516	Tropical Forest Soil	TVKRWGNALSLVVGVIVVVLFLIASVKVISFLVYAEGTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0209465_101879301	3300027874	Tropical Forest Soil	MKVSEPTVKRWGNAFSVVVFVIALMLFLIASVKVISYLVYAEGTVESYMSKSCSQSEQSGLEAKWEYGEGCLVNIDGRWVPQRKVPK
Ga0318516_105126481	3300031543	Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVKAEDTVERFMSKTCSQLEQSGREAKWEYGEGCLVNI
Ga0318516_108003801	3300031543	Soil	MNVSKPTVERWGNALSVVVGVIAVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0318534_102413201	3300031544	Soil	MNVSKPTVERWGNALSVVVGVIVVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0318541_100317222	3300031545	Soil	MNVSKPTVERWGNALSVVVGVIAVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPQRKVPK
Ga0318541_108579441	3300031545	Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0318541_108585962	3300031545	Soil	MKVSEPTVKRWGNAFSVVVFVIALMLFLIASVKVISYLVYAEGTVESYMSKSCSQSEQSGLEAKWEYGEGCLVNIDGRWVPQRKVP
Ga0318538_104405152	3300031546	Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVKAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVPERKVPK
Ga0318573_103602113	3300031564	Soil	VSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKTCSQLLEQSGREAKWEYGEGCLVNIDGRWVPERKVPK
Ga0310915_105731693	3300031573	Soil	PMNVSKHTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVPERKVPK
Ga0310915_106094631	3300031573	Soil	MNVSKPTVERWGNALSVVVGVIAVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEG
Ga0310915_107023601	3300031573	Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNVDGRWVPERKVPK
Ga0306917_114523171	3300031719	Soil	MNVSEPTVNRLGNAFSLVVGVIVVVLFLIASVKVISYLAYAEDTVERYMSKNCAQLEQSGLEAKWEYGEGCLVNIDGRWVKRNVTH
Ga0318501_104612981	3300031736	Soil	MNVSKPTVERWGNALSVVVGVIVVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPQRKVPK
Ga0306918_109343771	3300031744	Soil	KVSEPTVKRWGNAFSVVVFVIALMLFLIASVKVISYLVYAEDTVERYMSKNCAQAEQSGHEAKWEYGEGCLVNIDGRWVPEQKVPK
Ga0306918_114556521	3300031744	Soil	VVVGVIVVVLFSVASVKVLSYLVKAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0318492_105718321	3300031748	Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVKAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPQRKVPK
Ga0318509_103735743	3300031768	Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNIDGRWVPEQKVQK
Ga0318521_102507231	3300031770	Soil	VIVSLFEQPGRGAPMNVSKPTVKRWGNAFSVVVGVIVVVLSSVASVKVLSYLVKAEDTVERYMSKTCSQLEQSGREAKWGYGEGCLVNIDGRWVPERKVPK
Ga0318529_105550131	3300031792	Soil	MNVSKPTVERWGNALSVVVGVIVVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPQRK
Ga0318568_102406602	3300031819	Soil	MNVSKHTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPQRKVPK
Ga0318499_101736961	3300031832	Soil	EQPGRGAPMNVSKPTVERWGNALSVVVGVIAVVLFSVASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNIDGRWVSERKIPK
Ga0306919_104269032	3300031879	Soil	SVVVGVIVVVLFSVASVKVLSYLVKAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVPERKVPK
Ga0318544_102467851	3300031880	Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVPE
Ga0306923_102875061	3300031910	Soil	MNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVPERKVPK
Ga0306923_105552142	3300031910	Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPEQKVPK
Ga0306921_110081902	3300031912	Soil	APMNVSKPTFSRWANAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPEQKVPK
Ga0306921_121133883	3300031912	Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWE
Ga0310912_109071141	3300031941	Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNIDGRWVP
Ga0310912_114979382	3300031941	Soil	MNVSEPTVNRLGNAFSLVVGVIVVVLFLIASVKVISYLAYAEDTVERYMSKNCAQLEQSGLEAKWEYGEGCLVNIDGRW
Ga0310910_115337521	3300031946	Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNVDGRWVP
Ga0306926_105310211	3300031954	Soil	KPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVPEQKVPK
Ga0306926_114402381	3300031954	Soil	MNVSKPTVERWGNALSVVVGVIVVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVP
Ga0306926_127283602	3300031954	Soil	WGNAFSVVVGVIAVVLFLIASVKVISYLVYAEGTVERFMSKNCSQSQQSGLEAKWEYGKGCLVNIDGRWVPEREVPK
Ga0306922_101612423	3300032001	Soil	MNVSEPTVNRLGNAFSLVVGVIVVVLFLIASVKVISYLAYAEDTVERYMSKNCAQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0306922_105601762	3300032001	Soil	MNVSKPTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPERKVPK
Ga0310911_103310231	3300032035	Soil	MNASKPTISRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNI
Ga0310911_104169843	3300032035	Soil	MKVSEPTVKRWGNAFSVVVFVIALMLFLIASVKVISYLVYAEGTVESYMSKSCSQSEQSGLEAKWEYGEGCLVNIDVDGCRSEKSQNKGP
Ga0310911_105704492	3300032035	Soil	SKTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNIDGRWVPEQKVQK
Ga0318559_102215211	3300032039	Soil	MNVSKPTVERWGNALSVVVGVIVVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVN
Ga0318575_102159591	3300032055	Soil	APMNVSKPTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGREAKWEYGEGCLVNIDGRWVPQRKVPK
Ga0318504_103846602	3300032063	Soil	MNVSKHTVKRWGNAFSVVVGVIVVVLFSVASVKVLSYLVNAEDTVERYMSKTCSQLEQSGLEAKWAYGEGCLVNIDGRWVPERKVPK
Ga0306924_103813234	3300032076	Soil	PMNASKPTISRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNVDGRWVPERKVPK
Ga0306924_104460013	3300032076	Soil	RFRPVIVSLFEQPGRGAPMNVSKPTVERWGNALSVVVGVIAVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPQRKVPK
Ga0306924_109619991	3300032076	Soil	IVCMIEWPRRGAPMNVSEPTVNRLGNAFSLVVGVIVVVLFLIASVKVISYLAYAEDTVERYMSKNCAQLEQSGLEAKWEYGEGCLVNIDGRWVKRNVTH
Ga0306924_111317861	3300032076	Soil	NAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0318518_104966392	3300032090	Soil	MNVSKPTVERWGNALSVVVGVIVVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVRAVAC
Ga0318577_104097691	3300032091	Soil	MNVSKPTVERWGNALSVVVGVIVVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEG
Ga0306920_1000210594	3300032261	Soil	MKVSEPTVKRWGNAFSVVVGVIVLVLFLISSVKVISYLVYAEDTVERYMSKNCAQAEQSGHEAKWEYGEGCLVNIDGRWVPEQKVPK
Ga0306920_1007254411	3300032261	Soil	MNASKPTISRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0306920_1008550822	3300032261	Soil	MNVSKTVSRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPEQKVQK
Ga0306920_1031845821	3300032261	Soil	MNVSKPTFSRWANALSAVLGVVVVVLFLIASVKALSYLVNAEDTVERYMSKNCTQLEQSGLEAKWEYGK
Ga0306920_1035342551	3300032261	Soil	VVGVVVVALFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPEQKVPK
Ga0310914_100953861	3300033289	Soil	VVGVVVVVLFLIASVKVLSYLVNAESTVERYMSKNCSQLEQSGLEAKWEYGEGCLVNIDGRWVPERKVPK
Ga0310914_102177911	3300033289	Soil	FEQPGRGAPMNVSKPTVERWGNALSVVVGVIAVVLFSVASVKVISYLANAEDTVERYMSKTCSQLEQSGLEAKWEYGEGCLVNIDGRWVPQRKVPK
Ga0310914_104336492	3300033289	Soil	MNASKPTISRWGNAFSAVVGVVVVVLFLIASVKVLSYLVNAEDTVERYMSKNCSQLEQSGLEAKWEYGKGCLVNIDGRWVPERKVPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076721

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences