Metagenome Family F076688

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076688
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	43 residues
Representative Sequence	TSRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEY
Number of Associated Samples	31
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.74 %
% of genes near scaffold ends (potentially truncated)	95.73 %
% of genes from short scaffolds (< 2000 bps)	77.78 %
Associated GOLD sequencing projects	30
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (88.889 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water (83.761 % of family members)
Environment Ontology (ENVO)	Unclassified (83.761 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (83.761 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.70% β-sheet: 0.00% Coil/Unstructured: 49.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF03164	Obsolete Pfam Family	1.72
PF13639	zf-RING_2	0.86
PF04062	P21-Arc	0.86
PF06602	Myotub-related	0.86
PF00076	RRM_1	0.86
PF00254	FKBP_C	0.86
PF06424	PRP1_N	0.86
PF03638	TCR	0.86
PF13489	Methyltransf_23	0.86
PF14306	PUA_2	0.86
PF00005	ABC_tran	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.89 %
All Organisms	root	All Organisms	11.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.89 %
cellular organisms	root	All Organisms → cellular organisms	10.26 %
Viruses	superkingdom	All Organisms → Viruses	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.89 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	10.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.89 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	7.69 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.89 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	6.84 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.89 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	6.84 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.89 %
Pelagophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae	4.27 %
Dictyochophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae	2.56 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.89 %
Pelagomonadales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales	4.27 %
Dictyochales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Dictyochales	2.56 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.89 %
Aureococcus	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus	2.56 %
Dictyocha	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Dictyochales → Dictyocha	2.56 %
Pelagomonas	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas	1.71 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.89 %
Aureococcus anophagefferens	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	2.56 %
Dictyocha speculum	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Dictyochales → Dictyocha → Dictyocha speculum	2.56 %
Pelagomonas calceolata	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	1.71 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300012032\|Ga0136554_1010197	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	4153	Open in IMG/M
3300012032\|Ga0136554_1053917	Not Available	1065	Open in IMG/M
3300012032\|Ga0136554_1054200	All Organisms → Viruses → Predicted Viral	1059	Open in IMG/M
3300012032\|Ga0136554_1057097	Not Available	1001	Open in IMG/M
3300012032\|Ga0136554_1080758	Not Available	701	Open in IMG/M
3300012032\|Ga0136554_1085427	Not Available	664	Open in IMG/M
3300012032\|Ga0136554_1098715	Not Available	581	Open in IMG/M
3300012032\|Ga0136554_1099411	Not Available	577	Open in IMG/M
3300012036\|Ga0136600_1054424	Not Available	922	Open in IMG/M
3300012271\|Ga0136555_1034472	Not Available	1133	Open in IMG/M
3300012271\|Ga0136555_1067161	Not Available	788	Open in IMG/M
3300028375\|Ga0306865_1008091	Not Available	2668	Open in IMG/M
3300028375\|Ga0306865_1009299	Not Available	2518	Open in IMG/M
3300028375\|Ga0306865_1014866	Not Available	2033	Open in IMG/M
3300028375\|Ga0306865_1029365	Not Available	1407	Open in IMG/M
3300028375\|Ga0306865_1038760	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	1181	Open in IMG/M
3300028375\|Ga0306865_1041190	Not Available	1134	Open in IMG/M
3300028375\|Ga0306865_1056386	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Dictyochales → Dictyocha → Dictyocha speculum	904	Open in IMG/M
3300028375\|Ga0306865_1108826	Not Available	500	Open in IMG/M
3300031208\|Ga0307931_1002319	Not Available	12219	Open in IMG/M
3300031208\|Ga0307931_1002319	Not Available	12219	Open in IMG/M
3300031208\|Ga0307931_1018334	Not Available	2410	Open in IMG/M
3300031208\|Ga0307931_1049772	Not Available	900	Open in IMG/M
3300031208\|Ga0307931_1058847	Not Available	768	Open in IMG/M
3300031208\|Ga0307931_1066854	Not Available	681	Open in IMG/M
3300031208\|Ga0307931_1080202	Not Available	580	Open in IMG/M
3300031211\|Ga0307974_1012595	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	5452	Open in IMG/M
3300031211\|Ga0307974_1039227	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2367	Open in IMG/M
3300031211\|Ga0307974_1071833	All Organisms → cellular organisms → Eukaryota	1457	Open in IMG/M
3300031211\|Ga0307974_1074388	Not Available	1414	Open in IMG/M
3300031211\|Ga0307974_1106333	Not Available	1031	Open in IMG/M
3300031211\|Ga0307974_1113025	Not Available	972	Open in IMG/M
3300031211\|Ga0307974_1122584	Not Available	898	Open in IMG/M
3300031211\|Ga0307974_1135379	Not Available	813	Open in IMG/M
3300031212\|Ga0307959_1034531	Not Available	1594	Open in IMG/M
3300031212\|Ga0307959_1058384	Not Available	1091	Open in IMG/M
3300031212\|Ga0307959_1088689	Not Available	816	Open in IMG/M
3300031212\|Ga0307959_1093814	Not Available	784	Open in IMG/M
3300031213\|Ga0307937_1040397	Not Available	1029	Open in IMG/M
3300031213\|Ga0307937_1094822	Not Available	617	Open in IMG/M
3300031214\|Ga0307958_1072578	Not Available	555	Open in IMG/M
3300031220\|Ga0307939_1031168	Not Available	1282	Open in IMG/M
3300031220\|Ga0307939_1031680	Not Available	1268	Open in IMG/M
3300031220\|Ga0307939_1032391	Not Available	1250	Open in IMG/M
3300031220\|Ga0307939_1052326	Not Available	926	Open in IMG/M
3300031221\|Ga0307948_1100172	Not Available	1000	Open in IMG/M
3300031222\|Ga0307972_1096783	Not Available	1236	Open in IMG/M
3300031222\|Ga0307972_1157666	Not Available	743	Open in IMG/M
3300031222\|Ga0307972_1170372	Not Available	681	Open in IMG/M
3300031223\|Ga0307981_1062686	Not Available	1204	Open in IMG/M
3300031223\|Ga0307981_1063749	Not Available	1190	Open in IMG/M
3300031223\|Ga0307981_1091939	Not Available	904	Open in IMG/M
3300031223\|Ga0307981_1160675	Not Available	583	Open in IMG/M
3300031224\|Ga0307982_1016225	All Organisms → cellular organisms → Eukaryota	4783	Open in IMG/M
3300031225\|Ga0307942_1042509	Not Available	2180	Open in IMG/M
3300031225\|Ga0307942_1067727	Not Available	1476	Open in IMG/M
3300031225\|Ga0307942_1070758	Not Available	1421	Open in IMG/M
3300031225\|Ga0307942_1101663	Not Available	1012	Open in IMG/M
3300031225\|Ga0307942_1118993	Not Available	864	Open in IMG/M
3300031225\|Ga0307942_1142396	Not Available	718	Open in IMG/M
3300031243\|Ga0307970_1044304	Not Available	1009	Open in IMG/M
3300031243\|Ga0307970_1148986	Not Available	508	Open in IMG/M
3300031329\|Ga0307934_1007476	Not Available	4186	Open in IMG/M
3300031329\|Ga0307934_1017095	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Dictyochales → Dictyocha → Dictyocha speculum	2516	Open in IMG/M
3300031329\|Ga0307934_1023335	Not Available	2063	Open in IMG/M
3300031329\|Ga0307934_1061770	Not Available	1010	Open in IMG/M
3300031329\|Ga0307934_1111975	Not Available	593	Open in IMG/M
3300031333\|Ga0307936_1010782	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	2844	Open in IMG/M
3300031333\|Ga0307936_1054018	Not Available	1182	Open in IMG/M
3300031382\|Ga0307971_1017408	Not Available	2989	Open in IMG/M
3300031382\|Ga0307971_1028528	Not Available	2088	Open in IMG/M
3300031382\|Ga0307971_1036723	Not Available	1734	Open in IMG/M
3300031382\|Ga0307971_1041008	Not Available	1602	Open in IMG/M
3300031382\|Ga0307971_1058196	Not Available	1262	Open in IMG/M
3300031382\|Ga0307971_1095838	Not Available	908	Open in IMG/M
3300031382\|Ga0307971_1102334	Not Available	869	Open in IMG/M
3300031382\|Ga0307971_1125911	Not Available	756	Open in IMG/M
3300031387\|Ga0307947_1043808	Not Available	1692	Open in IMG/M
3300031387\|Ga0307947_1076853	Not Available	1050	Open in IMG/M
3300031387\|Ga0307947_1124203	Not Available	664	Open in IMG/M
3300031392\|Ga0307975_1048300	Not Available	1640	Open in IMG/M
3300031392\|Ga0307975_1079091	Not Available	1241	Open in IMG/M
3300031392\|Ga0307975_1140524	Not Available	829	Open in IMG/M
3300031393\|Ga0307967_1103477	Not Available	1033	Open in IMG/M
3300031394\|Ga0307963_1051896	Not Available	1578	Open in IMG/M
3300031394\|Ga0307963_1097651	Not Available	913	Open in IMG/M
3300031394\|Ga0307963_1107195	Not Available	842	Open in IMG/M
3300031397\|Ga0307960_1091390	Not Available	994	Open in IMG/M
3300031397\|Ga0307960_1133802	All Organisms → cellular organisms → Eukaryota → Sar	701	Open in IMG/M
3300031398\|Ga0307979_1006783	Not Available	6672	Open in IMG/M
3300031398\|Ga0307979_1045804	Not Available	1230	Open in IMG/M
3300031398\|Ga0307979_1060607	Not Available	978	Open in IMG/M
3300031398\|Ga0307979_1067585	Not Available	893	Open in IMG/M
3300031399\|Ga0307968_1133460	Not Available	661	Open in IMG/M
3300031404\|Ga0307945_1059721	Not Available	1520	Open in IMG/M
3300031404\|Ga0307945_1086486	Not Available	1100	Open in IMG/M
3300031404\|Ga0307945_1093325	Not Available	1027	Open in IMG/M
3300031404\|Ga0307945_1135820	Not Available	715	Open in IMG/M
3300031404\|Ga0307945_1139932	Not Available	694	Open in IMG/M
3300031404\|Ga0307945_1175946	Not Available	552	Open in IMG/M
3300031600\|Ga0307930_1020901	Not Available	2784	Open in IMG/M
3300031600\|Ga0307930_1028909	Not Available	2166	Open in IMG/M
3300031600\|Ga0307930_1029267	Not Available	2147	Open in IMG/M
3300031600\|Ga0307930_1031179	Not Available	2052	Open in IMG/M
3300031600\|Ga0307930_1049170	Not Available	1513	Open in IMG/M
3300031600\|Ga0307930_1064298	Not Available	1272	Open in IMG/M
3300031600\|Ga0307930_1110654	Not Available	888	Open in IMG/M
3300031600\|Ga0307930_1165161	Not Available	666	Open in IMG/M
3300031607\|Ga0307966_1255394	Not Available	661	Open in IMG/M
3300031613\|Ga0307978_1034561	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Dictyochales → Dictyocha → Dictyocha speculum	2348	Open in IMG/M
3300031613\|Ga0307978_1039322	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	2108	Open in IMG/M
3300031613\|Ga0307978_1063341	Not Available	1383	Open in IMG/M
3300031613\|Ga0307978_1097218	Not Available	934	Open in IMG/M
3300031704\|Ga0307943_1085249	Not Available	1156	Open in IMG/M
3300031704\|Ga0307943_1153675	Not Available	690	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	100.00%

Habitat	Taxonomy	Distribution
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	83.76%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	16.24%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300012032	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Torckler E5 #431	Environmental	Open in IMG/M
3300012036	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 2 #698	Environmental	Open in IMG/M
3300012271	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Torckler E5 #432	Environmental	Open in IMG/M
3300028375	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Torckler E5 #431 (v2)	Environmental	Open in IMG/M
3300031208	Saline water microbial communities from Organic Lake, Antarctica - #47	Environmental	Open in IMG/M
3300031211	Saline water microbial communities from Organic Lake, Antarctica - #784	Environmental	Open in IMG/M
3300031212	Saline water microbial communities from Organic Lake, Antarctica - #494	Environmental	Open in IMG/M
3300031213	Saline water microbial communities from Organic Lake, Antarctica - #3	Environmental	Open in IMG/M
3300031214	Saline water microbial communities from Organic Lake, Antarctica - #492	Environmental	Open in IMG/M
3300031220	Saline water microbial communities from Organic Lake, Antarctica - #122	Environmental	Open in IMG/M
3300031221	Saline water microbial communities from Organic Lake, Antarctica - #280	Environmental	Open in IMG/M
3300031222	Saline water microbial communities from Organic Lake, Antarctica - #780	Environmental	Open in IMG/M
3300031223	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #987	Environmental	Open in IMG/M
3300031224	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #989	Environmental	Open in IMG/M
3300031225	Saline water microbial communities from Organic Lake, Antarctica - #175	Environmental	Open in IMG/M
3300031243	Saline water microbial communities from Organic Lake, Antarctica - #712	Environmental	Open in IMG/M
3300031329	Saline water microbial communities from Organic Lake, Antarctica - #90	Environmental	Open in IMG/M
3300031333	Saline water microbial communities from Organic Lake, Antarctica - #1	Environmental	Open in IMG/M
3300031382	Saline water microbial communities from Organic Lake, Antarctica - #714	Environmental	Open in IMG/M
3300031387	Saline water microbial communities from Organic Lake, Antarctica - #232	Environmental	Open in IMG/M
3300031392	Saline water microbial communities from Organic Lake, Antarctica - #917	Environmental	Open in IMG/M
3300031393	Saline water microbial communities from Organic Lake, Antarctica - #648	Environmental	Open in IMG/M
3300031394	Saline water microbial communities from Organic Lake, Antarctica - #594	Environmental	Open in IMG/M
3300031397	Saline water microbial communities from Organic Lake, Antarctica - #542	Environmental	Open in IMG/M
3300031398	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #1058	Environmental	Open in IMG/M
3300031399	Saline water microbial communities from Organic Lake, Antarctica - #650	Environmental	Open in IMG/M
3300031404	Saline water microbial communities from Organic Lake, Antarctica - #228	Environmental	Open in IMG/M
3300031600	Saline water microbial communities from Organic Lake, Antarctica - #46	Environmental	Open in IMG/M
3300031607	Saline water microbial communities from Organic Lake, Antarctica - #646	Environmental	Open in IMG/M
3300031613	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #1056	Environmental	Open in IMG/M
3300031704	Saline water microbial communities from Organic Lake, Antarctica - #177	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0136554_10101972	3300012032	Saline Lake	MDTSRVNDYNCITQKDTQPSQTYSEGYIFLLLYATVVFLCIFGEY*
Ga0136554_10539171	3300012032	Saline Lake	RENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCILGSIH*
Ga0136554_10542001	3300012032	Saline Lake	RVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGSIN*
Ga0136554_10570971	3300012032	Saline Lake	TSRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFVEY*
Ga0136554_10807582	3300012032	Saline Lake	CITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEY*
Ga0136554_10854271	3300012032	Saline Lake	CITQKDTQPSQTCSEGYIFLLLFATVVFLCILGSIN*
Ga0136554_10987151	3300012032	Saline Lake	NNCISQKDTQPSRTCSEGYIFLLLYATVVLLCIFEEYQLD*
Ga0136554_10994111	3300012032	Saline Lake	CITQKDTQPSQACSEGYIFLLLFATVVFLCIFGEY*
Ga0136600_10544241	3300012036	Saline Lake	SRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCILGSIN*
Ga0136555_10344721	3300012271	Saline Lake	TSRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEY*
Ga0136555_10671611	3300012271	Saline Lake	ISMESCADTSRVNDYNFIKQKDTQPSQTCSEGYIFLLLYATVAFLCIFGEY*
Ga0306865_10080911	3300028375	Saline Lake	WLKDTSRVNDYNCITPMGTQPSQTCSEGYIFLLLYAKVVFLCIFGKYELD
Ga0306865_10092991	3300028375	Saline Lake	TSRENDYNYITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEY
Ga0306865_10148661	3300028375	Saline Lake	NDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFVEY
Ga0306865_10293651	3300028375	Saline Lake	NDYNCITQMNTKPSQTCSEGYIFLLLYAAVVFLCIFGEY
Ga0306865_10387601	3300028375	Saline Lake	RLKDTSRENDYNCITQKDTQPSQTCSGGYIFLLLFATVVFLYILGSIN
Ga0306865_10411901	3300028375	Saline Lake	RVNDYNCITQKDTQPSQTCSEGYILLLLFATVVFLCIFGEY
Ga0306865_10563862	3300028375	Saline Lake	NDYNFIKQKDTQPSQTCSEGYIFLLLYATVAFLCIFEEY
Ga0306865_11088261	3300028375	Saline Lake	CITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEY
Ga0307931_10023193	3300031208	Saline Water	MLKDTSRVNDYNCIAQKDTQPSQTCSKGYIFLLLYATVVFLYIFGEY
Ga0307931_10023196	3300031208	Saline Water	MLKDTSRVNDYNCIAQKDTQPSQTCSEGYIFLLLYATVVFLFFWGEY
Ga0307931_100335311	3300031208	Saline Water	MAEGHLESNDYNCITQKDTQPSQTCSEGYIFLLLYATVVLLCIFGEY
Ga0307931_10183341	3300031208	Saline Water	LKDTLRENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIVGEY
Ga0307931_10497721	3300031208	Saline Water	KDTSRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGSIN
Ga0307931_10588471	3300031208	Saline Water	LKDTSRENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFG
Ga0307931_10668541	3300031208	Saline Water	RVNDYNCITQKDTQPSQACSEGYIFLLLFATVVFLCIFGEC
Ga0307931_10802021	3300031208	Saline Water	NDYNCITQKDTQPSQTCSEGYIYMLLYAKVVLLCIFGGIN
Ga0307974_10125955	3300031211	Saline Water	NDYNCITQKDTQPSQTRSEGYIFLLLFATVVFLCIFGEY
Ga0307974_10392275	3300031211	Saline Water	WLKGTSRANDYNFIRQKNTQPSQGCSEGYIFLLLYATVVFLCIFREHELD
Ga0307974_10718331	3300031211	Saline Water	VNDYNFITQKDTQPSQTCSVGYIFLLLFATVVFLCIFGEY
Ga0307974_10743881	3300031211	Saline Water	RENDYNCSTQKDTQPSQTCSGGYIFPLLFATVVFLCILGSIN
Ga0307974_11063332	3300031211	Saline Water	YIKQKDTQPSQTCSEGYIFLLLYATVVFLCIFGEY
Ga0307974_11130252	3300031211	Saline Water	KDTSRENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFICILGSIN
Ga0307974_11225842	3300031211	Saline Water	RENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLYILGSIN
Ga0307974_11353791	3300031211	Saline Water	NYITQKDTQPSQTCSEGYIFLLLYATVVFLCIFGEY
Ga0307959_10345311	3300031212	Saline Water	SIPKPPDAXRLKDTSRENDYNCITQKDTQPSQACSEGYIFLLLFATVVFLCILGSIN
Ga0307959_10583845	3300031212	Saline Water	MLKDTSRVNDYNCIAQKDTQPSQTCSEGYIFLLLYATVVFLFFW
Ga0307959_10886891	3300031212	Saline Water	TSRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCILGSIN
Ga0307959_10938141	3300031212	Saline Water	SRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGSIN
Ga0307937_10403972	3300031213	Saline Water	MLKDTSRVNDYNCIAQKDTQPNQTCSKGYIFLLLYATVVFLYIF
Ga0307937_10948222	3300031213	Saline Water	IPKPPDACWLKDTSRVNDYNCITQKDTQPGQACSEGYHFLLLHATVVLLCIFGEYQLD
Ga0307958_10725781	3300031214	Saline Water	WRKVMEDTQPSQTCSEGYIFLLLFATVVFLCIFGEY
Ga0307939_10311681	3300031220	Saline Water	TDYNCITQKDTQPSQTCSEGYIFLLLYATVVFLCIIGEY
Ga0307939_10316801	3300031220	Saline Water	CITQKGTQPSQTCSEGYIFLLLFATVVFLCIFGEY
Ga0307939_10323912	3300031220	Saline Water	KDTLRENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEY
Ga0307939_10523262	3300031220	Saline Water	NDYKRITQKDTQSSQTXTEGYISLLLYATVVFLCIFGEY
Ga0307948_10902602	3300031221	Saline Water	RENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCILGVLTRLD
Ga0307948_11001721	3300031221	Saline Water	LKDTSRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCILGSIN
Ga0307972_10967832	3300031222	Saline Water	RENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEY
Ga0307972_11576661	3300031222	Saline Water	QKDTQPSQTCSEGYIFLLLFATVVFLCIFGEYCLD
Ga0307972_11703721	3300031222	Saline Water	NDYNCITQKDTQPSQTCSEGYIFLLPYATVVFLCIFAVY
Ga0307981_10626861	3300031223	Saline Water	SRLNDYNWITQKDTQPSQTCSEGYVFLLLYATVAFPCVLGSIN
Ga0307981_10637491	3300031223	Saline Water	DYDCITQKDTQPSQTCSEGYIFLLLFATVVFLCILGSVN
Ga0307981_10919391	3300031223	Saline Water	KDTSRENDYNCITQKDTQPSQTCSEGYIFLLLFATVLFLCILGSIN
Ga0307981_11606751	3300031223	Saline Water	THSIPKPPDAXRLKEISREHDYNCITQKDTQPSQTCSEGYILLLVFATVVFLCILGSIN
Ga0307982_101622511	3300031224	Saline Water	LKDTLRENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCNFGSIY
Ga0307942_10425091	3300031225	Saline Water	RLKDTSRENDYNCITQKDTQPSQTCSEGYIFLLLFAKVVFLCFFGEY
Ga0307942_10677272	3300031225	Saline Water	NDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLGFFGEY
Ga0307942_10707584	3300031225	Saline Water	MLKDTSRVNDYNCIAQKDTQPSQTCSEGYIFLLLYA
Ga0307942_11016631	3300031225	Saline Water	WLKDTSRLNDYNWITQKDTQPSQTCSEGYVFLLLYATVAFPCVLGSIN
Ga0307942_11189931	3300031225	Saline Water	DTSRENDYNCITQKDTQPSQTCSEGYIFLLLYATVVFLCILGSIN
Ga0307942_11423961	3300031225	Saline Water	VIAVTSRENDYNCITQKDTQPSQTTSSEGYTFLLLYATVVFLCILG
Ga0307970_10443041	3300031243	Saline Water	KDTSRVNDYNCITQKDTQPSQTCSEGYIFLLLSATVVFLCIFGEY
Ga0307970_11489861	3300031243	Saline Water	DYKRITQKDTQSSQTXTEGYISLLLYATVVFLCIFGEY
Ga0307934_10074761	3300031329	Saline Water	LKDTSRVNDYNCITQKDTQPSQTCSEGYILLLLFATVVFLCIFGEY
Ga0307934_10170952	3300031329	Saline Water	RLKDTSRENDYNCITQKDTQPSQTCSEGYIFLLLFATVAFLCIFGEY
Ga0307934_10233354	3300031329	Saline Water	RVNDYNCITQKGTQPSRLVLKVTFFLLLYATVAFLCIFGEY
Ga0307934_10617701	3300031329	Saline Water	RLKDTLRENDYNCITQKDTQPSQTCSEGYIFLLLFVTVVFLYIFGEY
Ga0307934_11119751	3300031329	Saline Water	ITQKDTQPSQTCSEGYIFLLLFATVVFLYILGSIN
Ga0307936_10107821	3300031333	Saline Water	LRDTSRENDYNCITQKDTQPSQTRSEGYIFLLLFATVVFLCIFGEY
Ga0307936_10540181	3300031333	Saline Water	VSLLILVLRGLSQNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCILGSIN
Ga0307971_10174085	3300031382	Saline Water	KDTSRVNDYNCVTQKDTQPSQTCSEGYIFLLLFATVVFLCILGSIN
Ga0307971_10285281	3300031382	Saline Water	CITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEYLLD
Ga0307971_10367231	3300031382	Saline Water	WLKDTSRVNDYNCITQKDTQPSQPCSEGYIFLLLFATVVFLCIFGEY
Ga0307971_10410083	3300031382	Saline Water	ENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFICILGSIN
Ga0307971_10581961	3300031382	Saline Water	RLKDTSRVNDHNCITQKDTQPSQTCSEGYIYLLLFATVVFLCVFGEY
Ga0307971_10958381	3300031382	Saline Water	TSRENDYNCITQKDTQPSQTCSEGYIFLLLFAKVVFLCIFGEY
Ga0307971_11023341	3300031382	Saline Water	KDTSRENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEY
Ga0307971_11259111	3300031382	Saline Water	SRENDYNCITQKDTQPSQACSEGYIFLLLFATVVFLCILGSIN
Ga0307947_10438081	3300031387	Saline Water	RLKDTSRENDYNCITQKDTQPSQTCSEGHIFLLLFATVVFLCILGSIN
Ga0307947_10768531	3300031387	Saline Water	DYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEYCLD
Ga0307947_11242031	3300031387	Saline Water	MDTSRVNDYNCITQKDTQPSQTYSEGYIFLLLYATVVFLCIFG
Ga0307975_10483001	3300031392	Saline Water	ENDYNCITQKDTQPSQACSEGYIFLLLFATVVFLCILGSIN
Ga0307975_10790912	3300031392	Saline Water	TSRVNDYNCITQKDTQPSQACSEGYIFLLLFATVVFLCIFGEY
Ga0307975_11405241	3300031392	Saline Water	LKDTSRENDYDCITQKDTQPSQTCSEGYIFLLLFATVVFLCILD
Ga0307967_11034771	3300031393	Saline Water	WLKDTSRENDYNCITQKDTQPSQTCSEGYIFLLLYAAVVFICFLGKFKLN
Ga0307963_10518961	3300031394	Saline Water	LKDTSRVNDYNCITQKDTQPSQTCSEGYIFLLLFAKVVFLCIFGEY
Ga0307963_10976511	3300031394	Saline Water	VNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEY
Ga0307963_11071951	3300031394	Saline Water	KDTSRANDYNCITQKDTQPSQTCSEGYIFLLLYATVVFLCIFGEY
Ga0307960_10913901	3300031397	Saline Water	VNDSSCITQKDTQPSQTCSEGDIFLLLYATVVFLCVFGGL
Ga0307960_11338022	3300031397	Saline Water	CITQKDTQPSQTCSEGYIFLLLFATAVFLYIFGEY
Ga0307979_10067831	3300031398	Saline Water	KDTSRVNDYNCITQKDTQPSQTCSEGYIFLLLYATVVFLCIFGGVLTRLD
Ga0307979_10458041	3300031398	Saline Water	LKDTSRVNDYNCITQKDTQPSQTCSEGYIFLLLYATVVFLCIIGEY
Ga0307979_10606072	3300031398	Saline Water	ITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEYFLD
Ga0307979_10675851	3300031398	Saline Water	TSRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGSIN
Ga0307968_11334601	3300031399	Saline Water	LKDTSRENDYNYIKQKDTQPSQTCSEGYIFLLLYATVVFLCIFGEY
Ga0307945_10597211	3300031404	Saline Water	LTHSIPKPPDAXRLKDTSRENDYNCISQKDTQPSQTCSDGYIFLLLFATVVFLCILGSIN
Ga0307945_10864861	3300031404	Saline Water	CLKDTSRVNDYNCITQKDTQPSQTCSEGYISLLLYATVVFLCIRGVLSRLR
Ga0307945_10933251	3300031404	Saline Water	MNPKDTSRQNYYNCITQKDTQPSQTCSEGYIFLLLYATVVFLY
Ga0307945_11358201	3300031404	Saline Water	MKIQSSRVNDYNCITQKNTQPSQTCSEGYIFLLLFATVVFLCILGE
Ga0307945_11399321	3300031404	Saline Water	SRVNDYNCITQKDTQPSQTCSEGYIFLLLYATVVFLCIIGEY
Ga0307945_11759461	3300031404	Saline Water	CITQKDTQPSQTCSEGYIFLLLYATVVFLCIIGEY
Ga0307930_10209011	3300031600	Saline Water	LKDTSRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGEYLLD
Ga0307930_10289091	3300031600	Saline Water	KDTLRENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCILGSIN
Ga0307930_10292672	3300031600	Saline Water	WLKDTSRVNDYNCITQKDTQPSQTCSEGYILLLLFATVVFLCIFGEY
Ga0307930_10311791	3300031600	Saline Water	KDTSRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFVEY
Ga0307930_10491701	3300031600	Saline Water	DTSRVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCILGSIN
Ga0307930_10642981	3300031600	Saline Water	ISSSSSSDTSRVNDYNCIMQKGTQPSQTCSEGYIFLLLFATVVFLCIFGEY
Ga0307930_11106541	3300031600	Saline Water	RVNDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCIFGSIN
Ga0307930_11651611	3300031600	Saline Water	LMLKDTSRVNDYNCIAQKDTQPSQTCSKGYIFLLLYATVVFLYIFGEY
Ga0307966_12553941	3300031607	Saline Water	HAQKDTQPSQTCSEGYIFLLLFATVVFLCILGSIN
Ga0307978_10345613	3300031613	Saline Water	DTSRENDYNSITQKDTQPSQTCSEGYIFLLLYATVVFLCILGSIN
Ga0307978_10393221	3300031613	Saline Water	RLKDTSRENDHNCITQKDTQPSQTCSGGYIFLLLFATVVFLCILGSIN
Ga0307978_10633411	3300031613	Saline Water	CIPQKDTQPSQACSEGYIFLLLFATVVFLCIFGEY
Ga0307978_10972181	3300031613	Saline Water	RVNDYNCIAQKETQPSQTCSEGYIFLLLFATVVFLCILGSIN
Ga0307943_10852493	3300031704	Saline Water	RENDYNCIMQKDTQPSQTCSEGYIFLLLYATVVFLCIFGSIN
Ga0307943_11536751	3300031704	Saline Water	RENDYNCITQKDTQPSQTCSEGYIFLLLFATVVFLCILGIIN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076688

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences