Metagenome / Metatranscriptome Family F076634

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076634
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	53 residues
Representative Sequence	VEDQEYTNPFVDVHRKVKVFKDRAREANKNDAELRESRSVQEAKEILDKEPN
Number of Associated Samples	69
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.32 %
% of genes near scaffold ends (potentially truncated)	15.25 %
% of genes from short scaffolds (< 2000 bps)	72.03 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.695 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (25.424 % of family members)
Environment Ontology (ENVO)	Unclassified (29.661 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.271 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.50% β-sheet: 0.00% Coil/Unstructured: 52.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF11154	DUF2934	5.08
PF01740	STAS	3.39
PF16576	HlyD_D23	1.69
PF09365	DUF2461	1.69
PF14534	DUF4440	1.69
PF12704	MacB_PCD	1.69
PF09865	DUF2092	1.69
PF04191	PEMT	0.85
PF00226	DnaJ	0.85
PF03446	NAD_binding_2	0.85
PF01594	AI-2E_transport	0.85
PF00004	AAA	0.85
PF09723	Zn-ribbon_8	0.85
PF13358	DDE_3	0.85
PF12840	HTH_20	0.85
PF04366	Ysc84	0.85
PF13231	PMT_2	0.85
PF13538	UvrD_C_2	0.85
PF13492	GAF_3	0.85
PF13148	DUF3987	0.85
PF00561	Abhydrolase_1	0.85
PF04187	Cofac_haem_bdg	0.85
PF13280	WYL	0.85
PF01609	DDE_Tnp_1	0.85
PF04226	Transgly_assoc	0.85
PF13701	DDE_Tnp_1_4	0.85
PF00011	HSP20	0.85
PF01184	Gpr1_Fun34_YaaH	0.85
PF00155	Aminotran_1_2	0.85
PF05598	DUF772	0.85
PF13610	DDE_Tnp_IS240	0.85
PF00873	ACR_tran	0.85
PF13561	adh_short_C2	0.85
PF00582	Usp	0.85
PF00072	Response_reg	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.85
COG1584	Succinate-acetate transporter SatP	Energy production and conversion [C]	0.85
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.85
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.85
COG3016	Putative heme-binding protein PhuW	General function prediction only [R]	0.85
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.85
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.85
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.85
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.85
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.69 %
Unclassified	root	N/A	48.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.69 %
Unclassified	root	N/A	48.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.69 %
Unclassified	root	N/A	48.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.31 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.31 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.63 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.31 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.69 %
Acidobacteria bacterium 37-71-11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-71-11	1.69 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.85 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	0.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.31 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.93 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1.69 %
Acidobacteria bacterium 37-71-11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-71-11	1.69 %
Verrucomicrobia bacterium ADurb.Bin018	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	0.85 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.85 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.93 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	2.54 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.54 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	1.69 %
Acidobacteria bacterium 37-71-11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-71-11	1.69 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.85 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.85 %
Verrucomicrobia bacterium ADurb.Bin018	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	0.85 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.54 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	2.54 %
Syntrophobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter	1.69 %
Acidobacteria bacterium 37-71-11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-71-11	1.69 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.85 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
Verrucomicrobia bacterium ADurb.Bin018	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	0.85 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.54 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	2.54 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	1.69 %
Acidobacteria bacterium 37-71-11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-71-11	1.69 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.85 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
Verrucomicrobia bacterium ADurb.Bin018	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	0.85 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E02GV5H5	Not Available	506	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101367859	Not Available	947	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105596889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1068	Open in IMG/M
3300000789\|JGI1027J11758_12735930	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300000955\|JGI1027J12803_109528587	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300001385\|JGI20193J14888_1011948	Not Available	1719	Open in IMG/M
3300001394\|JGI20191J14862_1004920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3386	Open in IMG/M
3300002347\|JGIcombinedJ26865_1002144	All Organisms → cellular organisms → Bacteria	3561	Open in IMG/M
3300003218\|JGI26339J46600_10088282	Not Available	773	Open in IMG/M
3300003219\|JGI26341J46601_10001038	All Organisms → cellular organisms → Bacteria	8929	Open in IMG/M
3300003219\|JGI26341J46601_10001755	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7080	Open in IMG/M
3300003219\|JGI26341J46601_10020174	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	2183	Open in IMG/M
3300003219\|JGI26341J46601_10072246	Not Available	1042	Open in IMG/M
3300003223\|JGI26343J46809_1019394	Not Available	538	Open in IMG/M
3300003861\|Ga0031654_10016712	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2139	Open in IMG/M
3300004080\|Ga0062385_10004308	All Organisms → cellular organisms → Bacteria	4294	Open in IMG/M
3300004080\|Ga0062385_10453440	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300004080\|Ga0062385_10996529	Not Available	562	Open in IMG/M
3300004092\|Ga0062389_102417119	Not Available	695	Open in IMG/M
3300004092\|Ga0062389_104554806	Not Available	522	Open in IMG/M
3300004152\|Ga0062386_100221051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1494	Open in IMG/M
3300004152\|Ga0062386_100274199	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300004152\|Ga0062386_100342425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300004152\|Ga0062386_100579375	Not Available	916	Open in IMG/M
3300004152\|Ga0062386_101251647	Not Available	617	Open in IMG/M
3300004152\|Ga0062386_101598527	Not Available	544	Open in IMG/M
3300005541\|Ga0070733_10515051	Not Available	800	Open in IMG/M
3300005938\|Ga0066795_10137641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-71-11	728	Open in IMG/M
3300006055\|Ga0097691_1113509	Not Available	770	Open in IMG/M
3300006864\|Ga0066797_1115334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-71-11	940	Open in IMG/M
3300009520\|Ga0116214_1174027	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300009520\|Ga0116214_1412805	Not Available	528	Open in IMG/M
3300009616\|Ga0116111_1000046	All Organisms → cellular organisms → Bacteria	114056	Open in IMG/M
3300009698\|Ga0116216_10545804	Not Available	700	Open in IMG/M
3300009698\|Ga0116216_10754161	Not Available	584	Open in IMG/M
3300009824\|Ga0116219_10406977	Not Available	758	Open in IMG/M
3300010048\|Ga0126373_11338303	Not Available	782	Open in IMG/M
3300010048\|Ga0126373_12728863	Not Available	551	Open in IMG/M
3300010339\|Ga0074046_10892973	Not Available	517	Open in IMG/M
3300010341\|Ga0074045_10026880	Not Available	4403	Open in IMG/M
3300010341\|Ga0074045_10040513	All Organisms → cellular organisms → Bacteria	3435	Open in IMG/M
3300010341\|Ga0074045_10334709	Not Available	988	Open in IMG/M
3300010341\|Ga0074045_10808934	Not Available	592	Open in IMG/M
3300010341\|Ga0074045_10985958	Not Available	531	Open in IMG/M
3300010343\|Ga0074044_10228538	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300010343\|Ga0074044_10453495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	839	Open in IMG/M
3300010379\|Ga0136449_100010289	All Organisms → cellular organisms → Bacteria	25927	Open in IMG/M
3300010379\|Ga0136449_100040164	All Organisms → cellular organisms → Bacteria	10914	Open in IMG/M
3300010379\|Ga0136449_100465566	Not Available	2211	Open in IMG/M
3300010379\|Ga0136449_100573336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1933	Open in IMG/M
3300010379\|Ga0136449_101098039	Not Available	1266	Open in IMG/M
3300010379\|Ga0136449_101460406	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300010379\|Ga0136449_102363149	Not Available	768	Open in IMG/M
3300010379\|Ga0136449_104628949	Not Available	504	Open in IMG/M
3300014156\|Ga0181518_10271774	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300014501\|Ga0182024_10746544	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300016404\|Ga0182037_10088333	All Organisms → cellular organisms → Bacteria	2197	Open in IMG/M
3300016702\|Ga0181511_1318641	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300017937\|Ga0187809_10136584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300017943\|Ga0187819_10074683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2020	Open in IMG/M
3300017955\|Ga0187817_10241851	All Organisms → cellular organisms → Bacteria → Acidobacteria	1150	Open in IMG/M
3300017959\|Ga0187779_11255957	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300017959\|Ga0187779_11317218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	512	Open in IMG/M
3300018001\|Ga0187815_10340826	Not Available	637	Open in IMG/M
3300018057\|Ga0187858_10021209	All Organisms → cellular organisms → Bacteria	5073	Open in IMG/M
3300020581\|Ga0210399_10524879	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300020583\|Ga0210401_11469751	Not Available	539	Open in IMG/M
3300021171\|Ga0210405_10929577	Not Available	659	Open in IMG/M
3300021433\|Ga0210391_10169439	Not Available	1719	Open in IMG/M
3300022722\|Ga0242657_1245801	Not Available	511	Open in IMG/M
3300025474\|Ga0208479_1010554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1975	Open in IMG/M
3300025481\|Ga0208079_1001124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	14356	Open in IMG/M
3300025581\|Ga0208355_1002221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	8141	Open in IMG/M
3300025619\|Ga0207926_1061681	Not Available	999	Open in IMG/M
3300027698\|Ga0209446_1001499	All Organisms → cellular organisms → Bacteria → Acidobacteria	5564	Open in IMG/M
3300027698\|Ga0209446_1002317	All Organisms → cellular organisms → Bacteria	4646	Open in IMG/M
3300027698\|Ga0209446_1008161	All Organisms → cellular organisms → Bacteria	2563	Open in IMG/M
3300027698\|Ga0209446_1191703	Not Available	526	Open in IMG/M
3300027783\|Ga0209448_10027683	Not Available	1885	Open in IMG/M
3300027812\|Ga0209656_10011097	All Organisms → cellular organisms → Bacteria → Proteobacteria	5672	Open in IMG/M
3300027812\|Ga0209656_10013524	All Organisms → cellular organisms → Bacteria	5101	Open in IMG/M
3300027812\|Ga0209656_10057120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	2176	Open in IMG/M
3300027812\|Ga0209656_10118917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1363	Open in IMG/M
3300027812\|Ga0209656_10222529	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300027825\|Ga0209039_10041477	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300027825\|Ga0209039_10108285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1185	Open in IMG/M
3300027825\|Ga0209039_10218750	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300027884\|Ga0209275_10471197	Not Available	714	Open in IMG/M
3300027902\|Ga0209048_10021995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5517	Open in IMG/M
3300031122\|Ga0170822_14564528	Not Available	557	Open in IMG/M
3300031231\|Ga0170824_101807470	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300031249\|Ga0265339_10399191	Not Available	643	Open in IMG/M
3300031469\|Ga0170819_14239102	Not Available	1120	Open in IMG/M
3300031474\|Ga0170818_102158643	Not Available	623	Open in IMG/M
3300031474\|Ga0170818_111253066	Not Available	692	Open in IMG/M
3300031545\|Ga0318541_10561785	Not Available	638	Open in IMG/M
3300031573\|Ga0310915_11031563	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300031668\|Ga0318542_10632609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	559	Open in IMG/M
3300031668\|Ga0318542_10782774	Not Available	500	Open in IMG/M
3300031708\|Ga0310686_118065528	Not Available	546	Open in IMG/M
3300031890\|Ga0306925_10196468	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300032160\|Ga0311301_10017710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	20722	Open in IMG/M
3300032160\|Ga0311301_10244883	All Organisms → cellular organisms → Bacteria	2969	Open in IMG/M
3300032160\|Ga0311301_10450460	Not Available	1939	Open in IMG/M
3300032160\|Ga0311301_10721750	Not Available	1394	Open in IMG/M
3300032160\|Ga0311301_10983695	Not Available	1119	Open in IMG/M
3300032160\|Ga0311301_11444585	Not Available	853	Open in IMG/M
3300032160\|Ga0311301_11619525	Not Available	786	Open in IMG/M
3300032160\|Ga0311301_12247187	Not Available	624	Open in IMG/M
3300032180\|Ga0307471_102567031	Not Available	645	Open in IMG/M
3300032205\|Ga0307472_100457491	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300032770\|Ga0335085_10000006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	940629	Open in IMG/M
3300032770\|Ga0335085_10068130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4721	Open in IMG/M
3300032783\|Ga0335079_10124099	Not Available	2914	Open in IMG/M
3300032893\|Ga0335069_10945770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	960	Open in IMG/M
3300032893\|Ga0335069_10950824	Not Available	957	Open in IMG/M
3300032893\|Ga0335069_11621258	Not Available	692	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.15%
Host-Associated	Host-Associated	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.25%
Aquatic	Environmental → Aquatic	33.90%
Plants	Host-Associated → Plants	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.25%
Freshwater	Environmental → Aquatic → Freshwater	33.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	32.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.10%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.69%
Loam	Environmental → Terrestrial → Soil → Loam	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	27.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.24%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.54%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	25.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	17.80%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.63%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	6.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.24%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.39%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300001394	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_06664230	2189573000	Grass Soil	MEDQEYINPFEEVHRKARAFKDRVGEANKNDAELRKSRAIQEANEILNKERDWPVRRVAAKG
INPhiseqgaiiFebDRAFT_1013678591	3300000364	Soil	MEDQEYTNPFVEVHKKAKAFKDRISQANNNDAEVRKARANQDANDVLKNERQE*
INPhiseqgaiiFebDRAFT_1055968891	3300000364	Soil	MVDDQQYTNQFAEVHRKVKIFKDLLREANKHDAELRESRQVREAKETIDGEWAHLKGSQ*
JGI1027J11758_127359302	3300000789	Soil	MEDQEYTNPFVEVHKKAKAFKDRISQANNNDAEVRKARANQDANDVLKNERQE**
JGI1027J12803_1095285871	3300000955	Soil	ADVHRKAKAFRDRGREANKNDAELRESRAVKEGSKKVQAPDRLRDKEALPSH
JGI20193J14888_10119483	3300001385	Arctic Peat Soil	VEDREYTNPFVDVHKKVKAFKDRTREANKNDAELRESRSVREAKEILDKEPDSSR*Y
JGI20191J14862_10049205	3300001394	Arctic Peat Soil	VEDREYTNPFVDVHKKVKAFKDRTREANKNDAELRESRSVREAKEILDKEPDSSR*
JGIcombinedJ26865_10021445	3300002347	Arctic Peat Soil	VGDQEYTNPFAEVHGKAKAFKDRAREGNKNDAXLRERRSVQEAKEILDKERD*
JGI26339J46600_100882821	3300003218	Bog Forest Soil	VGDQEYTNPFAEVHSRAKAFKDRAREVNKNDAELRERRSVQEAKEILDKEHD*
JGI26341J46601_100010383	3300003219	Bog Forest Soil	VGDPEYTNPFAEVHRKAKAFKDRAREANKNDAELRERRSVQEAKEILDKERE*
JGI26341J46601_100017556	3300003219	Bog Forest Soil	VGDQEYTNPFAEVHSKAKAFKDRAREVNKNDAELRERRSVQEAKEILDKERD*
JGI26341J46601_100201742	3300003219	Bog Forest Soil	VEDQEYTNPFVDVHRKAKAFKDQAREVNNNDAELRESRLVQEAKQILGKEPD*
JGI26341J46601_100722462	3300003219	Bog Forest Soil	VEDQEYINPFEDVHKKAKAFRDRAREANNSDAALRETRLVREAKEILDKEPS*
JGI26343J46809_10193942	3300003223	Bog Forest Soil	MEDQGYTNPFVDVHRKVKVFKDRAREANKNDAELRESRSVPEAKEIFDKAPN*
Ga0031654_100167124	3300003861	Freshwater Lake Sediment	VDDQAYTNPFEDVHRKAKAFKDRAREADKNDADLRESRLRQEAKEIVDKELDQFTPKP*
Ga0062385_100043085	3300004080	Bog Forest Soil	VADQEYTNPFVDVHRKVKVLKDRAREANKNDADLRESRSVQEAKEVLDKEPN*
Ga0062385_104534402	3300004080	Bog Forest Soil	VEDQKYTNPFEEVHNKVKAFKDRAREANKDDAELRESRLVHEAKEILDKEPNPSPNIPTPEPSS*
Ga0062385_109965291	3300004080	Bog Forest Soil	VDDQQYTNRFAEVHSKVKVLKDQARQENKNDAELRESRLVQEFKGILDREPD*
Ga0062389_1024171191	3300004092	Bog Forest Soil	VADQQYTNPFAAVHAKVKIFKDRAREESKNDAELRESRAVQKATDVLDPEPK*
Ga0062389_1045548061	3300004092	Bog Forest Soil	VEDQDYTNPFVDAHKRVKAFKDRAREANKNDAKLRESRLVQEAKEILGKEPGS*
Ga0062386_1002210512	3300004152	Bog Forest Soil	EYTNPFVDVHRKAKAFKDQAREVNNNDAELRESRLVQEAKQILGKEPD*
Ga0062386_1002741993	3300004152	Bog Forest Soil	IVADQEYTNPFVDVHRKVKVLKDRAREANKNDAELRESRSVQEAKEVLDKEPN*
Ga0062386_1003424252	3300004152	Bog Forest Soil	VEDQEYTNPFIDVHRKATAFKDRVREANKNDAELHESRLVQAAKEIVGKESK*
Ga0062386_1005793751	3300004152	Bog Forest Soil	VDDQEYTNPFADVHRKAKAFRDRAREAHKNEAELRESRLVQDAAEILDHEAK*
Ga0062386_1012516472	3300004152	Bog Forest Soil	VEDQEHTNPFEDVHRKTKAFKDRAREANKNDAELRESKLVQEVKEIIDKERD*
Ga0062386_1015985272	3300004152	Bog Forest Soil	TNPFVDVHRKAKAFKDHAREVNKNDAELRESRLVQEAKQPLGKEPD*
Ga0070733_105150512	3300005541	Surface Soil	MAGVNIVNDQPYTNRFEDVHKKVKAFKDRALEAKNGDAELRETRLAQEAKEILAKDDVSRD*
Ga0066795_101376412	3300005938	Soil	VEDQEYSNPFEDVHRKAKAFKDRAREANKNDEELRKSKLVQEAKEILDKEPK*
Ga0097691_11135091	3300006055	Arctic Peat Soil	VEDQQYINPFEDVHKKVKAIKGRAREANKNDAELRESKLVQEAKEILGKEPE*
Ga0066797_11153341	3300006864	Soil	VEDQEYSNPFEDVHRKAKAFKDRAREANKNDEELRKSKLAQEAKEILDKEPK*
Ga0116214_11740272	3300009520	Peatlands Soil	DQEYTNPFVDVHRKVKVFKDRIREANKSDAELRESRSVPEAKEILDKEPN*
Ga0116214_14128051	3300009520	Peatlands Soil	VADQEYTNPFVDVHRKVKVFKDRETSKNDAELREGRSAQEAKEILDKEPNN*
Ga0116111_100004675	3300009616	Peatland	VEDQEYTNPFADVHKKAKAFKNRAREANKNDAELRESRLVQEAKDILDKERPEPVGPTTFL*
Ga0116216_105458041	3300009698	Peatlands Soil	VEDREYTNPFVDVHRKVKVFKDRAREANKNDAEVRESRSVQEVKEILGKEPNSSR*
Ga0116216_107541611	3300009698	Peatlands Soil	VEDQEYTNPFIDVHRKATAFKDRVREANKNDAELRESRSVQEAKEVLDKEPN*
Ga0116219_104069771	3300009824	Peatlands Soil	VADQEYTNPFVDVHRKVKVLKDRAREANKNDAELRESRSVQEAKEVLDKEPN*
Ga0126373_113383031	3300010048	Tropical Forest Soil	MEDQEYTNPFAEVHRKAKAFKDRASEANKNDAELRKSRAIQEASEILDKDRD*
Ga0126373_127288631	3300010048	Tropical Forest Soil	MEDQQYTNPFVEVHKKAKAFRDRAREANEKDAELRESRLVQEFKGIALDKELE*
Ga0074046_108929732	3300010339	Bog Forest Soil	VEDQEYTNPFVDVHRKVKAFKDRVREANKNDAELSESRSVQEAKEILDKEPKVFKDRAGEANK
Ga0074045_100268804	3300010341	Bog Forest Soil	VEDQEYTNPFVDVHRKVKVFKDRAREANKNDAELRESRSVQEAKEILDKEPN*
Ga0074045_100405131	3300010341	Bog Forest Soil	ADDQEFTNPFADVHRKAKSFKYRATEASTIDAELRKSRAIQEAKDIIDNEPE*
Ga0074045_103347092	3300010341	Bog Forest Soil	MVEDQEYTNPFENVHRKVQAFKDRVREENKNDAELRQGRLVQESKDILDKEPK*
Ga0074045_108089341	3300010341	Bog Forest Soil	VGDQQYTNPFVDVLRKAKAFKDRAREANKNDAELRESRLVQEAKELLSKEPK*
Ga0074045_109859582	3300010341	Bog Forest Soil	VEDQEYTNPFVDVHRKVKAFKDRVREANKNDAELSESRSVQEAKEILDKEPKVFKDRAGEAN
Ga0074044_102285382	3300010343	Bog Forest Soil	VEDQEYTNPFVDVHRKAKAFKDRAREANKNDAELRESRLMQEAKEILGKEPKQVFPAS*
Ga0074044_104534952	3300010343	Bog Forest Soil	VEDQEYTNPFVDVHRRVKVFKDRVREANKNDADLRESRSAQEAKEVLDKEPH*
Ga0136449_10001028917	3300010379	Peatlands Soil	VQSKSGRNIVEDQKYTNPFEDVHNKVKAFKDRLREANESDADLRKSRLLQEAKEILGKEPSS*
Ga0136449_1000401645	3300010379	Peatlands Soil	VEDQEYTNPFVDVHRKVKVFKDRIREANKSDAELRESRSVPEAKEILDKEPN*
Ga0136449_1004655663	3300010379	Peatlands Soil	VEDREYTNPFVDVHRKVKVFKDRAREANKNDAELRESRSAPVVKEILDKELN*
Ga0136449_1005733363	3300010379	Peatlands Soil	VEDQKYTNPFVDVHRKVKVFKDRETSKNDAELREGRSAQEAKEILDKEPNN*
Ga0136449_1010980391	3300010379	Peatlands Soil	VEDQEHTNPFEDVHRKAKAFKDHAREANKNDAELRESKLVQEAKEIIDKERD*
Ga0136449_1014604062	3300010379	Peatlands Soil	VEDQEYTNPFVEVHKKAKAFKDRISEANNNDAEVRKTRAIQDANDVFKKEREE*
Ga0136449_1023631491	3300010379	Peatlands Soil	MVEDQQYTNPFVDVHKKVKAFKDRAREANKSDAEIRESRSVQEAKEILGKEPNSPR*
Ga0136449_1046289491	3300010379	Peatlands Soil	VQDQEYTNPFVDVHRKAKAFKDRVHEANKNDAELRESRSVPEAKEI
Ga0181518_102717741	3300014156	Bog	VKNEGYTNPFEDVHRKAKAFKTHLREANKNDDELRASRLVQEAKEILDKESK*
Ga0182024_107465442	3300014501	Permafrost	MVEDQQYTNPFVDVHKKVKAFKDRAREANKADAELRESRSVQEAKEILGKEPNLPR*
Ga0182037_100883332	3300016404	Soil	VDDQQYTNQFAEVHRKVKIFKDLLRDANKHDAELRESRQVQEAKETIDGKWAHPKDSQ
Ga0181511_13186412	3300016702	Peatland	VKNEGYTNPFEDVHRKAKAFKTHLREANKNDDELRASRLVQEAKEILDKESK
Ga0187809_101365842	3300017937	Freshwater Sediment	VEDEKYTNPFVDVHRKAKAFKDHAREVNKNDAELRESRLVQEAKQILGKEPD
Ga0187819_100746834	3300017943	Freshwater Sediment	VEDEKYTNPFVDVHRKAKAFKDHAREVNKNDAEVRENRLVQEAKQILGKEPD
Ga0187817_102418513	3300017955	Freshwater Sediment	VEDQEYTNPFVDVHRKAKAFKDRAREANKNDAELRESRLMQEAKEIFDKEPSSSR
Ga0187779_112559571	3300017959	Tropical Peatland	VKDEEYTNPFEDVHRKAKAFKTHLREANKNDDELRASRLVQEAKEILDKESK
Ga0187779_113172182	3300017959	Tropical Peatland	VKDEEHTNPFEDVHRKAKVLRTHLREGNKNDHELRASRLVQEAKEILDKESK
Ga0187815_103408261	3300018001	Freshwater Sediment	VEGQEYTNPFVEVHRKAKAFKDRAREANKNDAELRESRLMQEAKEIFDKEPKQVLPAS
Ga0187858_100212094	3300018057	Peatland	VEDQEYTNPFADVHKKAKAFKNRAREANKNDAELRESRLVQEAKDILDKERPEPVGPTTF
Ga0210399_105248791	3300020581	Soil	MEDQEYTNPFVEVHKKAKAFKDRANEANKNDAELRKSRAIQEANDVFKKEHVKSD
Ga0210401_114697511	3300020583	Soil	MEDQEYTNPFVEVHKKAKAFKDRANEANKNDAELRKSRAVQEANDVFKKEHVKSD
Ga0210405_109295771	3300021171	Soil	MEDQEYTNPFVEVHKKAKAFKDRANEANKNDAELRKSRAIQEANDVFKKEHAKSD
Ga0210391_101694391	3300021433	Soil	MEDQEYTNPFVDVHNKVKALKDRTRETNKNDAELRESRTLQEAKEVLGQGA
Ga0242657_12458011	3300022722	Soil	QEYTNPFVDVHNKVKALKDRTRETNKNDAELRESRTLQEAKEVLGQGA
Ga0208479_10105545	3300025474	Arctic Peat Soil	VGDQEYTNPFAEVHGKAKAFKDRAREGNKNDAELRERRSVQEAKEILDKERD
Ga0208079_10011247	3300025481	Arctic Peat Soil	VEDREYTNPFVDVHKKVKAFKDRTREANKNDAELRESRSVREAKEILDKEPDSSR
Ga0208714_10138451	3300025527	Arctic Peat Soil	VDDQEYTNRFAEVYAKVKTFKDRARETDKNDAELRESRLMQEVTGLGI
Ga0208355_10022215	3300025581	Arctic Peat Soil	MEDREYTNPFVDVHKKVKAFKDRTREANKNDAELRESRSVREAKEILDKEPDSSR
Ga0207926_10616812	3300025619	Arctic Peat Soil	VEDREYTNPFVDVHKKVKAFKDRTREANKNDAELRESKLVQEAKEILGKEPE
Ga0209446_10014994	3300027698	Bog Forest Soil	VEDQEYTNPFIDVHRKATAFKDRVREANKDDAELRESRLVQEAKEIVGKESK
Ga0209446_10023176	3300027698	Bog Forest Soil	VADQEYTNPFVDVHRKVKVLKDRAREANKNDADLRESRSVQEAKEVLDKEPN
Ga0209446_10081611	3300027698	Bog Forest Soil	MEDQGYTNPFVDVHRKVKVFKDRAREANKNDAELRESRSVPEAKEIFDKAPN
Ga0209446_11917032	3300027698	Bog Forest Soil	VEDQEYTNPFVDVHRRVKVFKDRVREANKNDADLRESRSAQEAKEVLDKEPH
Ga0209448_100276832	3300027783	Bog Forest Soil	VDDQKYINPFEDVYAKVKILKERAREASKNDADVRESRLVQELKGLPDREHD
Ga0209656_100110976	3300027812	Bog Forest Soil	VEDQEYINPFEDVHKKAKAFRDRAREANNSDAALRETRLVREAKEILDKEPS
Ga0209656_100135242	3300027812	Bog Forest Soil	VGDQEYTNPFAEVHSKAKAFKDRAREVNKNDAELRERRSVQEAKEILDKERD
Ga0209656_100571202	3300027812	Bog Forest Soil	VEDQEYTNPFVDVHRKAKAFKDQAREVNNNDAELRESRLVQEAKQILGKEPD
Ga0209656_101189173	3300027812	Bog Forest Soil	VGDPEYTNPFAEVHRKAKAFKDRAREANKNDAELRERRSVQEAKEILDKERE
Ga0209656_102225292	3300027812	Bog Forest Soil	VEDQEYRNPFVDVHRKAKAFKDRVREANKNDAELRESRLVQEAKEILDKEPKQVIPAS
Ga0209039_100414773	3300027825	Bog Forest Soil	VEDQEHTNPFEDVHRKTKAFKDRAREANKNDAELRESKLVQEVKEIIDKERD
Ga0209039_101082852	3300027825	Bog Forest Soil	VGDQEYTNPFAEVHSRAKAFKDRAREVNKNDAELRERRSVQEAKEILDKEHD
Ga0209039_102187502	3300027825	Bog Forest Soil	VEDQEYTNPFIDVHRKATAFKDRVREANKNDAELHESRLVQAAKEIVGKESK
Ga0209275_104711971	3300027884	Soil	MVDQEYINPFVHVHSKVKAFKDRLREANKGHADLREDRLMQETKKMEITDK
Ga0209048_100219952	3300027902	Freshwater Lake Sediment	VDDQAYTNPFEDVHRKAKAFKDRAREADKNDADLRESRLRQEAKEIVDKELDQFTPKP
Ga0170822_145645282	3300031122	Forest Soil	NPFVEVHKKAKAFKDRANEANKNDAELRKSRAIQEANDVFKKEHVKSD
Ga0170824_1018074701	3300031231	Forest Soil	MEDQGYTNPFAEVHKKAKAFKDRANEASKNDAELRKSRAIQEASDVFKNEREE
Ga0265339_103991911	3300031249	Rhizosphere	VADQQYINPFEDVHKKVKAFKDRAREANKNDAELRESRSLQEAKEIIDKEPS
Ga0170819_142391022	3300031469	Forest Soil	MEDQGYTNPFAEVHKKAKAFKDRANEANKNDAELRKSRAIQEANDVFKKEREE
Ga0170818_1021586431	3300031474	Forest Soil	LEDQEYINPFVDVHRKAKALRDRAREANEKDAELRESRTAQETKDIVGKERD
Ga0170818_1112530662	3300031474	Forest Soil	MEDQEYRNPFVEVHKKAKAFKDRANEANKNDAELRKSRAIQEANDVFKKEREE
Ga0318541_105617851	3300031545	Soil	MVDDQQYTNQFAEVHRKVKIFKDLLRDANKHDAELRESRQVQEAKETIDGKWAHPKDSQ
Ga0310915_110315632	3300031573	Soil	MEDQQYTNPFVEVHKKAKAFRDRAREANEKDAELRESRLVQEFKGIALDKELE
Ga0318542_106326092	3300031668	Soil	MEDQQYTNPFVEVHKKAKAFRDRAREANEKDAELRESRLVQEFKGIAVDKELE
Ga0318542_107827741	3300031668	Soil	VNDQQYTNQFAEVHRKVKIFKDLLRDANKHDAELRESRQVQEAKETIDGKWAHPKDSQ
Ga0310686_1180655282	3300031708	Soil	MEDQQYTNPFVDVHKKVKAFKDRAREANKSDAELRESRSVQEAKDILGKEPDSPR
Ga0306925_101964682	3300031890	Soil	VNDQQYTNQFAEVHRKVKVFKDLVREANKHDAELRESRQVREAKETIDGEWAHLKSSQ
Ga0311301_1001771012	3300032160	Peatlands Soil	VQSKSGRNIVEDQKYTNPFEDVHNKVKAFKDRLREANESDADLRKSRLLQEAKEILGKEPSS
Ga0311301_102448832	3300032160	Peatlands Soil	VADQEYTNPFVDVHRKVKVLKDRAREANKNDAELRESRSVQEAKEVLDKEPN
Ga0311301_104504603	3300032160	Peatlands Soil	VEDQKYTNPFVDVHRKVKVFKDRETSKNDAELREGRSAQEAKEILDKEPNN
Ga0311301_107217501	3300032160	Peatlands Soil	VEDREYTNPFVDVHRKVKVFKDRAREANKNDAELRESRSAPVVKEILDKELN
Ga0311301_109836954	3300032160	Peatlands Soil	VEDQEYTNPFVDVHRKVKVFRDRAREANKNDAELRESRAVPEAKEILDKEPSLASPHH
Ga0311301_114445852	3300032160	Peatlands Soil	VEDQEYTNPFIDVHRKATAFKDRVREANKNDAELRESRLVQEAKEIV
Ga0311301_116195251	3300032160	Peatlands Soil	VEDQEYTNPFVDVHRKVKVFKDRIREANKSDAELRESRSVPEAKEILDKEPN
Ga0311301_122471872	3300032160	Peatlands Soil	VQDQEYTNPFVDVHRKAKAFKDRVHEANKNDAELRESRSVPEAKEILDKEPD
Ga0307471_1025670311	3300032180	Hardwood Forest Soil	VADQEYTNPFADVHRKAKAFKDRAREVNKDDVELRESRAAKEGSENVQAPDRLRDH
Ga0307472_1004574911	3300032205	Hardwood Forest Soil	VADQEYTNRFEEVHRKAKAIKDRIDEINKRDAELREERLAQETRHI
Ga0335085_10000006325	3300032770	Soil	MAQDQAYTNRFVDVHEKVKAFKDRVRDAKNSDAEVRESRAAQEAKEVLDKEVK
Ga0335085_100681305	3300032770	Soil	VGDREYTSPFAEVHTKAKAFKDRAREANKNDAELRERRSVQEGKEILGKESD
Ga0335079_101240992	3300032783	Soil	MAQDQAYTNRFVDVHEKVKAFKDRVRDAKNSDAELRESRAAQEAKEVLDKEVK
Ga0335069_109457701	3300032893	Soil	MEDQEYTNPFVNVHRKAKALKDRAREANKNDAELRESRLVRETADILDH
Ga0335069_109508241	3300032893	Soil	VEDQQYTNPFVEVRRKAKAVRDRVAEANRIEAELRESRLVRETADILDHEAK
Ga0335069_116212581	3300032893	Soil	MEDPQYTNPFEDVHRKAKAFRDRSREANKNNDELRESRLVQEAKEILDKEGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076634

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences