Metagenome / Metatranscriptome Family F076627

Overview

Basic Information

• Family ID: F076627
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 118
• Average Sequence Length: 46 residues
• Representative Sequence: GSVSGDLSSEVPLGSDPGSAEGYGPTLVVRGKTVSGDFRVFRAS
• Number of Associated Samples: 105
• Number of Associated Scaffolds: 118

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.85 %
• % of genes near scaffold ends (potentially truncated): 99.15 %
• % of genes from short scaffolds (< 2000 bps): 94.92 %
• Associated GOLD sequencing projects: 100
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (91.525 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (9.322 % of family members)
• Environment Ontology (ENVO): Unclassified (26.271 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (44.915 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 18.06%
  Coil/Unstructured: 81.94%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF07690	MFS_1	61.86
PF05977	MFS_3	11.86
PF02637	GatB_Yqey	5.93
PF02934	GatB_N	2.54
PF01636	APH	1.69
PF00072	Response_reg	0.85
PF01425	Amidase	0.85
PF02882	THF_DHG_CYH_C	0.85
PF00903	Glyoxalase	0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	11.86
COG0064	Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit	Translation, ribosomal structure and biogenesis [J]	8.47
COG2511	Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domain	Translation, ribosomal structure and biogenesis [J]	8.47
COG1610	Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity	General function prediction only [R]	5.93
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.85
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	0.85
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.85

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.53 %
Unclassified	root	N/A	8.47 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.53 %
Unclassified	root	N/A	8.47 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.53 %
Unclassified	root	N/A	8.47 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.20 %
Unclassified	root	N/A	8.47 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82.20 %
Unclassified	root	N/A	8.47 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	67.80 %
Unclassified	root	N/A	8.47 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.85 %

Level 7

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	58.47 %
Unclassified	root	N/A	8.47 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.85 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	58.47 %
Unclassified	root	N/A	8.47 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.85 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.85 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	58.47 %
Unclassified	root	N/A	8.47 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.85 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.85 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2088090008|P3_DRAFT_NODE_107970_len_1027_cov_9_116845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1077
2124908043|A2_c1_ConsensusfromContig13432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642
2124908045|KansclcFeb2_ConsensusfromContig1194442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591
2140918007|ConsensusfromContig15602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	985
2166559005|cont_contig109612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533
2170459006|GBPF9FW01D4NOU	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517
3300001418|JGI20188J14859_1006111	All Organisms → cellular organisms → Bacteria	1598
3300001686|C688J18823_10647985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673
3300005176|Ga0066679_10759775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623
3300005178|Ga0066688_10954418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525
3300005434|Ga0070709_11634274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525
3300005435|Ga0070714_102281095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527
3300005439|Ga0070711_101726235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549
3300005467|Ga0070706_101598049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595
3300005467|Ga0070706_102007644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	524
3300005529|Ga0070741_10337724	Not Available	1401
3300005539|Ga0068853_102500973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500
3300005542|Ga0070732_10825824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565
3300005553|Ga0066695_10887442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509
3300005559|Ga0066700_10158283	All Organisms → cellular organisms → Bacteria	1540
3300005560|Ga0066670_10812521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567
3300005560|Ga0066670_11012086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508
3300005563|Ga0068855_101886344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606
3300005577|Ga0068857_100805743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897
3300005578|Ga0068854_102291409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500
3300005587|Ga0066654_10458357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697
3300005616|Ga0068852_100427403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1308
3300005764|Ga0066903_101760375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1182
3300005764|Ga0066903_104685950	Not Available	728
3300005893|Ga0075278_1085857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506
3300005896|Ga0075282_1065548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542
3300006046|Ga0066652_101601496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599
3300006606|Ga0074062_11641907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689
3300006854|Ga0075425_102514543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570
3300006954|Ga0079219_10821322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735
3300007821|Ga0104323_119634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1520
3300007821|Ga0104323_120892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1591
3300009012|Ga0066710_100826011	Not Available	1422
3300009012|Ga0066710_101047537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1260
3300009137|Ga0066709_100770573	Not Available	1391
3300009551|Ga0105238_11977184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616
3300010366|Ga0126379_11194625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867
3300010373|Ga0134128_11012371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918
3300010379|Ga0136449_103611293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586
3300010397|Ga0134124_13012080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515
3300011269|Ga0137392_10711996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831
3300011271|Ga0137393_11201359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644
3300012005|Ga0120161_1098062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704
3300012200|Ga0137382_10287944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1144
3300012201|Ga0137365_10765455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705
3300012208|Ga0137376_11226058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640
3300012355|Ga0137369_10386335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1013
3300012362|Ga0137361_10667658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	951
3300012922|Ga0137394_10691467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859
3300012924|Ga0137413_11452821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556
3300012977|Ga0134087_10455369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635
3300012977|Ga0134087_10707139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535
3300012989|Ga0164305_11777454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556
3300013100|Ga0157373_10728568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728
3300013105|Ga0157369_11582659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666
3300013105|Ga0157369_11628059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656
3300013294|Ga0120150_1112967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510
3300013307|Ga0157372_10249155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2062
3300013763|Ga0120179_1031303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1265
3300013772|Ga0120158_10111684	All Organisms → cellular organisms → Bacteria	1610
3300015164|Ga0167652_1010662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2005
3300017821|Ga0187812_1130014	Not Available	815
3300017927|Ga0187824_10187792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699
3300017943|Ga0187819_10365287	Not Available	833
3300017947|Ga0187785_10076356	Not Available	1302
3300017959|Ga0187779_10615756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728
3300017959|Ga0187779_11023004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574
3300017973|Ga0187780_10499327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869
3300018030|Ga0187869_10172229	All Organisms → cellular organisms → Bacteria	1067
3300018071|Ga0184618_10235939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772
3300018433|Ga0066667_11635799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575
3300020081|Ga0206354_10729508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506
3300024288|Ga0179589_10505246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561
3300025501|Ga0208563_1028727	All Organisms → cellular organisms → Bacteria	1360
3300025878|Ga0209584_10152415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871
3300025906|Ga0207699_10490726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886
3300025906|Ga0207699_10745459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718
3300025910|Ga0207684_11418383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568
3300025917|Ga0207660_11105697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646
3300025917|Ga0207660_11151032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632
3300025921|Ga0207652_10195930	All Organisms → cellular organisms → Bacteria	1818
3300025922|Ga0207646_11551201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572
3300025949|Ga0207667_12103383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523
3300026078|Ga0207702_11854995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594
3300026142|Ga0207698_10148392	All Organisms → cellular organisms → Bacteria	2031
3300026550|Ga0209474_10202173	Not Available	1265
3300027633|Ga0208988_1158126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542
3300027842|Ga0209580_10546453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576
3300027862|Ga0209701_10304488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914
3300027869|Ga0209579_10676689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559
3300028577|Ga0265318_10241856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658
3300028654|Ga0265322_10013988	All Organisms → cellular organisms → Bacteria	2322
3300028768|Ga0307280_10124596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874
3300028800|Ga0265338_10139906	All Organisms → cellular organisms → Bacteria	1897
3300028807|Ga0307305_10480314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558
3300028828|Ga0307312_11185271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505
3300031239|Ga0265328_10342414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581
3300031240|Ga0265320_10251004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785
3300031242|Ga0265329_10003868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6418
3300031247|Ga0265340_10034004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2536
3300031249|Ga0265339_10374096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668
3300031250|Ga0265331_10134109	All Organisms → cellular organisms → Bacteria	1128
3300031344|Ga0265316_10782902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669
3300031719|Ga0306917_11132730	Not Available	609
3300031753|Ga0307477_10351974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1013
3300031753|Ga0307477_10678927	Not Available	690
3300031938|Ga0308175_100648418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1141
3300031939|Ga0308174_10427542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1071
3300032261|Ga0306920_104269662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514
3300032261|Ga0306920_104329929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510
3300032828|Ga0335080_10259798	All Organisms → cellular organisms → Bacteria	1895
3300032954|Ga0335083_10320507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1353
3300032954|Ga0335083_10807327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.81%
Host-Associated	Host-Associated	20.34%
Engineered	Engineered	0.85%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.73%
Plants	Host-Associated → Plants	20.34%
Aquatic	Environmental → Aquatic	5.08%
Modeled	Engineered → Modeled	0.85%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.78%
Freshwater	Environmental → Aquatic → Freshwater	4.24%
Sediment	Environmental → Aquatic → Sediment	0.85%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.85%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.54%
Loam	Environmental → Terrestrial → Soil → Loam	13.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.85%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.47%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.24%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.85%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	8.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.08%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.39%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.39%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.54%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.69%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.85%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental
2166559005	Simulated microbial communities from Lyon, France	Engineered
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental
3300001418	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012	Environmental
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental
3300005896	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204	Environmental
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300007821	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 Soapdenovo	Environmental
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012005	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0M	Environmental
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00782260	2088090008	Soil	TNLDVDAGSVSGDLSSEVPLGSDRADEAGPTLIVRGKTVSGDFRVFRAA
A2_c1_00492010	2124908043	Soil	VDAGSVSGDLASEVPLGSDPDAAGGDGPALVVRGKTVSGDFRVFRGL
KansclcFeb2_06069540	2124908045	Soil	EVGVAAGSNLDVDAGSVSGDLSSEVPLGSDPGAGVAEGPTLVVRGKTVSGDFRVYRA
A_all_C_01982170	2140918007	Soil	AAGTNLDVDAGSVSGDLASEVPLGSDPDAAGGDGPALVVRGKTVSGDFRVFRGL
cont_0611.00006550	2166559005	Simulated	RRFRPGDLTSEVPLGSDPGSGGCSWPVLVVRGKTVSGDFRVFRAV
L01_06784920	2170459006	Grass Soil	SEVPLADTPDRSDDGGPTVVVRGKTVSGDFRVFRAA
JGI20188J14859_10061111	3300001418	Arctic Peat Soil	GSVSGDLSSEVALGSDIGNIGGGGPTLVVRGKTVSGDFKVFRAA*
C688J18823_106479852	3300001686	Soil	DIEVGVAAGTNLDVDAGSVSGDLASEVPLGDTPGGNGGEGPVLVLRGKTVSGDFRVFRGQ
Ga0066679_107597751	3300005176	Soil	VAAGTNLDVDAGSVSGDLASEVPLGSDPSAIGGDGPALVVRGKTVSGDFRVFRGL*
Ga0066688_109544182	3300005178	Soil	DVDAGSVSGDLTSEVALGSDIGNIGPEGPMLVVRGKTVSGDFKVFRAA*
Ga0070709_116342742	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GDIEVGVETGTNLDVDAGSVSGDLSSEVPLGSDSASAVGEGPTLVVRGKSVSGDFRVFRAG*
Ga0070714_1022810951	3300005435	Agricultural Soil	GVAAGTNVDVDANSVSGDLDSEVPLGSDSGGLAPGPTLVVRGKTVSGDFRLVRAS*
Ga0070711_1017262351	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LDVDANSVSGDLDSEVALGGELEGLEEGGPTLVVRGKTVSGDFRIVRA*
Ga0070706_1015980491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VAPGSNLDVDAGSVSGDLASEVPLGSEPATGGDGPTVVVRGRTVSGDFKVFRAA*
Ga0070706_1020076442	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	TNLDVDAGSVSGELSSEVPLGSEPGEAGGDGPFLVVRGKTVSGDFRVFRAG*
Ga0070741_103377241	3300005529	Surface Soil	APGTNLDVDAGSVSGDLSSEVPLGSDPSYNGGEGPTLVVRGKTVSGDFRVFRAA*
Ga0068853_1025009731	3300005539	Corn Rhizosphere	VSGDLDSAVALGSEAGFEEGGPTLVVRGKTVSGDFRIVRA*
Ga0070732_108258241	3300005542	Surface Soil	SEVPLGSEPGAANGDGPVLVVRGKTVSGDFRVFRGQ*
Ga0066695_108874422	3300005553	Soil	LDVDAGSVSGDLSSEVPLGSEPGETEDAGPTLVLRGKTVSGDFRVFRA*
Ga0066700_101582833	3300005559	Soil	GTNLDVDAGSVSGDLTSEVPLASDPGFVGDGPTLVARGKTVSGDFRVFRAV*
Ga0066670_108125211	3300005560	Soil	AAGTNLDVDANSVSGDLNSEIPLGDDVGGLEPGPTLRVRGKTVSGDFRLVRAS*
Ga0066670_110120861	3300005560	Soil	TNLDVDAGSVSGDLDSEVALGSDIGNIGPDGPMLVVRGKTVSGDFKVFRAA*
Ga0068855_1018863442	3300005563	Corn Rhizosphere	DVDANSVSGDLDSAVALGSEAGFEEGGPTLVVRGKTVSGDFRIVRA*
Ga0068857_1008057432	3300005577	Corn Rhizosphere	HLGVAEGTNVDVDANSVSGDLSSDVPLGADPTGVHTDGPTLVVRGKTVSGDFKLVRA*
Ga0068854_1022914092	3300005578	Corn Rhizosphere	NLDVDAGSVSGDLSSDVPLGSDAGNVGDGPTLVVRGKTVSGDFKVFRAA*
Ga0066654_104583571	3300005587	Soil	TNLDVDAGSVSGDLDSEVALGSDAGNLGDGPVLVVRGKTVSGDFKVFRAA*
Ga0068852_1004274031	3300005616	Corn Rhizosphere	NSVSGDLDSEVPLGSDIGLAPGPTLVVRGKTVSGDFRLVRAGS*
Ga0066903_1017603752	3300005764	Tropical Forest Soil	AGTNLDVDAGSVSGDLASEVPLGAEPGEAGDGPTLVVRGKTVSGDFKVFRAA*
Ga0066903_1046859501	3300005764	Tropical Forest Soil	VDVDAGSASGTLSSEVPLSDSPSGDPGPTLVVRSKTVSGDFRVVRAA*
Ga0075278_10858572	3300005893	Rice Paddy Soil	SGDLTSEVPLGSEPGSATGEGPTLVVRGKTVSGDFRVFRAS*
Ga0075282_10655481	3300005896	Rice Paddy Soil	TSEVPLGSDSSAGGDDLAPLVVRGKTVSGDFRVYRAA*
Ga0066652_1016014962	3300006046	Soil	EVPLGSEPGSADGDGPTLVVRGKTVSGDFRVFRAS*
Ga0074062_116419072	3300006606	Soil	EVPLGSDPGALAVEGGPTLVVRGKTVSGDFRVFRAA*
Ga0075425_1025145431	3300006854	Populus Rhizosphere	VSGDLSSEVPLGSDPGAGMAEGPTLVVRGKTVSGDFRVYRA*
Ga0079219_108213222	3300006954	Agricultural Soil	APGTNLDVDAGSVSGDLSSDVPLGSDPGAGVAEGPALVVRGKTVSGDFRVFRA*
Ga0104323_1196343	3300007821	Soil	ELGVAAGTNLDVDAGSVSGDLASEVPLGSDPDAAGGDGPALVVRGKTVSGDFRVFRGL*
Ga0104323_1208923	3300007821	Soil	ELGVAAGTNLDVDAGSVSGDLASEVPLGSDPGALGSDGPALIVRGKTVSGDFRVFRGV*
Ga0066710_1008260112	3300009012	Grasslands Soil	EAGTSLDVDAGSVSGDLSSEVPLGSEPGSADGDGSTLVVRGKTVSGDFRVFRAS
Ga0066710_1010475372	3300009012	Grasslands Soil	AGTNLDVDAGSVSGDLDSEVPLDNDPGAAGDGPLLVVRGKTVSGDFRVFRGQ
Ga0066709_1007705731	3300009137	Grasslands Soil	GTNLDVDAGSVSGDLSSEVPLGSDAASAAGHGPTLVVRGKSVSGDFRVFRAG*
Ga0105238_119771842	3300009551	Corn Rhizosphere	GDLESEVALGSDPSGTGDGPTLVVRGKTVSGDFRLVRAS*
Ga0126379_111946251	3300010366	Tropical Forest Soil	EVPLGSEASSISDDGPTLVVRGKTVSGDFRVRRAL*
Ga0134128_110123712	3300010373	Terrestrial Soil	SGELSSEVPLGSEPCEAGGDGPVLVVRGKTVSGDFRVFRAG*
Ga0136449_1036112931	3300010379	Peatlands Soil	GSNVDVDANTVSGELSSDVPLVSVPGEGGGGPTVVVRGKTVSGDFKVLRAATPEASPAKAG*
Ga0134124_130120801	3300010397	Terrestrial Soil	LDVDAGSVSGDLASDVALGSDAAAVGEGPTVVVRGKTVSGDFKLFRAA*
Ga0137392_107119962	3300011269	Vadose Zone Soil	DAGSVSGDLTSEVPLASDPGFVGDGPTLVVRGKTVSGDFRVFRAV*
Ga0137393_112013591	3300011271	Vadose Zone Soil	NLDVDAGSVSGELASEVPLGSDPDAAGEGPMLVVRGKTVSGDFRVFRGP*
Ga0120161_10980622	3300012005	Permafrost	IELGVPTGTNLDVDAGSVSGDLASEVPLGSDPDAAAGDGPALVVRGKTVSGDFRVFRGI*
Ga0137382_102879442	3300012200	Vadose Zone Soil	VSGDLSSEVPLGSDAGSAGGDGPMLVVRGKSVSGDFRVFRAS*
Ga0137365_107654551	3300012201	Vadose Zone Soil	VSGDLSSEVPLGSEPGSADGDGPTLVVRGKTVSGDFRVFRAS*
Ga0137376_112260581	3300012208	Vadose Zone Soil	SLDVDAGSVSGDLSSEVPLGSEPGSADGDGPTLVVRGKTVSGDFRVFRAS*
Ga0137369_103863352	3300012355	Vadose Zone Soil	GVEAGTNLDVDAGSVSGDLASEVPLGSEPGGAADGPTLVVRGKTVSGNFRVIRAS*
Ga0137361_106676581	3300012362	Vadose Zone Soil	TNLDVDAGSVSGELASEVPLGSDPDAAGEGPMLVVRGKTVSGDFRVFRGP*
Ga0137394_106914671	3300012922	Vadose Zone Soil	DLTSEVPLGSEPGGEPGGPMLVVRGKTVSGDFKVFRAA*
Ga0137413_114528212	3300012924	Vadose Zone Soil	DLASEAPFGSDPDVIGGGGPALVVRGKTVSGDFRVFRGL*
Ga0134087_104553692	3300012977	Grasslands Soil	TNVDVDANSVSGDLGSDVPLGSDPDGVHGEGPTLVVRGKTVSGDFRLIRAS*
Ga0134087_107071392	3300012977	Grasslands Soil	VDAGSVSGDLSSEVPLGSDAASAAGHGPTLVVRGKSVSGDFRVFRAG*
Ga0164305_117774541	3300012989	Soil	TNLDVDAGSVSGDLSSEVPLGSDPGSAEGYGPTLVVRGKTVSGDFRVFRAS*
Ga0157373_107285681	3300013100	Corn Rhizosphere	PGTSLDVDAGSVSGDLSSEVPLGSDPGAAIAAGGPTLVVRGKTVSGDFRVFRAA*
Ga0157369_115826592	3300013105	Corn Rhizosphere	VDVDANSVSGDLSSDVPLSSDPGSAGGDGPVVVVRGKTVSGDFRITRAYAA*
Ga0157369_116280591	3300013105	Corn Rhizosphere	LDSAVALGSEAGFEEGGPTLVVRGKTVSGDFRLVRAG*
Ga0120150_11129672	3300013294	Permafrost	LDVDAGSVSGDLSSEVPLGSDAASAVGDGPTLVVRGKSVSGDFRVFRAS*
Ga0157372_102491553	3300013307	Corn Rhizosphere	DAGSVSGDLSSEVPLGSEPGVADGDGPALVVRGKTVSGDFRVFRAG*
Ga0120179_10313032	3300013763	Permafrost	VDAGSVSGDLASEVPLGSDPDAAGGDGPALVVRGKTVSGDFRVFRGL*
Ga0120158_101116841	3300013772	Permafrost	VDAGSVSGDLSSEVPLGSEPGAHEGGPSLVVRGKTVSGDFRVFRAA*
Ga0167652_10106621	3300015164	Glacier Forefield Soil	DLASEVPLGSDPDAIGGSGPALVVRGKTVSGDFRVFRGL*
Ga0187812_11300142	3300017821	Freshwater Sediment	SASGDLSSEVPLSDTPGGDVGPTVVVRGNTVSGDFRVFRAA
Ga0187824_101877922	3300017927	Freshwater Sediment	TNLDVDAGSVSGDLSSEVALGSDVGEIGDGPTLVVRGKTVSGDFRVFRAA
Ga0187819_103652872	3300017943	Freshwater Sediment	DLSSEVPLSDTPGGDVGPTVVVRGNTVSGDFRVFRAA
Ga0187785_100763561	3300017947	Tropical Peatland	GSVSGDLTSEVPLGSDFGSMGDGPTLVVRGKTVSGDFKVFRAA
Ga0187779_106157562	3300017959	Tropical Peatland	VSGDLSSEVALGDSPDSTGGGPTVVVRGKTVSGDFRVFRAA
Ga0187779_110230042	3300017959	Tropical Peatland	SVSGELTSEVPLADAPVEAGDGPTVVVRGKTVSGDFRVFRAA
Ga0187780_104993271	3300017973	Tropical Peatland	TAVSGELSSEVPLASTPELVGEGDGPTVVVRGKTVSGDFHVFRAA
Ga0187869_101722291	3300018030	Peatland	AAGSSVDVDASSVSGDLSSDVPLANVPGEGESGPTVVVRGKTVSGDFKVARAA
Ga0184618_102359392	3300018071	Groundwater Sediment	NLDVDAGSVSGDLSSEVPLGSDAASAVGDGPTLVVRGKSVSGDFRVFRAG
Ga0066667_116357992	3300018433	Grasslands Soil	DAGSVSGDLTSEVPLGSDAASAAGEGPTLVVRGKSVSGDFRVFRAG
Ga0206354_107295082	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VSGDLSSDVPLSSDPGSAGGDGPVVVVRGKTVSGDFRITRAYAA
Ga0179589_105052461	3300024288	Vadose Zone Soil	SVSGDLSSEVPLGSDPGSAEGYGPMLVVRGKTVSGDFRVFRGQ
Ga0208563_10287272	3300025501	Peatland	GSSVDVDASSVSGDLSSDVPLANVPGEGESGPTVVVRGKTVSGDFKVARAA
Ga0209584_101524152	3300025878	Arctic Peat Soil	SGDLTSEVPLGSEPGVTHDGGPMLVVRGKTISGDFRVFRAA
Ga0207699_104907262	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LTSEVPLGSDPDGFDNGDGPTLVVRGKTVSGDFRVFRG
Ga0207699_107454591	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GTSLDVDANSVSGDLDSEVALGGELEGIEGDGPTLVVRGKTVSGDFRIGRA
Ga0207684_114183831	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AGSVSGDLSSEVPLGSEPATGGNGPTVVVRGRTVSGDFKVFRAA
Ga0207660_111056972	3300025917	Corn Rhizosphere	SGELSSEVPLGSEPGEAGGDGPVLVVRGKTVSGDFRVFRAG
Ga0207660_111510321	3300025917	Corn Rhizosphere	VSGDIHLGVAEGTNVDVDANSVSGDLSSDVPLGADPTGVHTDGPTLVVRGKTVSGDFKLVRA
Ga0207652_101959301	3300025921	Corn Rhizosphere	GSVSGDLSSEVPLGSDPGSAEGYGPTLVVRGKTVSGDFRVFRAS
Ga0207646_115512011	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SVSGDLSSEVPLGSERGPASDGPTLVVRGKTVSGDFRVFRAL
Ga0207667_121033832	3300025949	Corn Rhizosphere	EPGTTLDVDANSVSGDLDSAVALGSEAGFEEGGPTLVVRGKTVSGDFRIVRA
Ga0207702_118549952	3300026078	Corn Rhizosphere	LSSEVPLGSDPGSAEGYGPTLVVRGKTVSGDFRVFRAS
Ga0207698_101483923	3300026142	Corn Rhizosphere	NSVSGDLDSEVPLGSDIGLAPGPTLVVRGKTVSGDFRLVRAGS
Ga0209474_102021732	3300026550	Soil	EVPLGSDAAAAAGEGPTLVVRGRSVSGDFRVVRAG
Ga0208988_11581262	3300027633	Forest Soil	NLDVDAGSVSGDLASEVPLGSDPDALGGDGPALVVRGKTVSGDFRVFRGL
Ga0209580_105464531	3300027842	Surface Soil	GSVSGDLTSEVPLGSEPNGFDNGDGPMLVVRGKTVSGDFRVFRG
Ga0209701_103044881	3300027862	Vadose Zone Soil	LDVDAGSVSGDLTSEVPLASDPGFVGDGPTLVVRGKTVSGDFRVFRAV
Ga0209579_106766892	3300027869	Surface Soil	DLTSEVPLGSDAGAVGDGPTLVVRGKTVSGDFKVFRAA
Ga0265318_102418562	3300028577	Rhizosphere	SDVPLASAPGESDGGGPVVIVRGKTVSGDFKVARAA
Ga0265322_100139884	3300028654	Rhizosphere	DLSSDVPLASAPDESEGGGPVVIVRGKTVSGDFKVARAA
Ga0307280_101245962	3300028768	Soil	APGTTLDVDAGSVSGDLSSEVPLGSDPGAVAVDGGPTLVVRGKTVSGDFRVFRAA
Ga0265338_101399061	3300028800	Rhizosphere	LTSEVPLGSEPGATHDGGPTLVVRGKTISGDFRVFRAA
Ga0307305_104803142	3300028807	Soil	AGSVSGDLSSEVPLGSDVASAAGDGPTLVVRGKSVSGDFRVFRAG
Ga0307312_111852712	3300028828	Soil	NLDVDAGSVSGDLDSEVPLGSEPGVGDGSGPTLVVRGKTVSGDFRVFRA
Ga0265328_103424141	3300031239	Rhizosphere	IAAGSNVDVDANSVSGDLSSEVALATDPGVAGVGDGPTVVVRGKTVSGDFRVFRAA
Ga0265320_102510043	3300031240	Rhizosphere	DLTSEVPLANDMGTLGGGPTLVVRGNTVSGDFRVFRAA
Ga0265329_100038689	3300031242	Rhizosphere	SSDVPLASAPGESDGGGPVVIVRGKTVSGDFKVARAA
Ga0265340_100340043	3300031247	Rhizosphere	AGSVSGDLTSEVPLGSEPGATHDGGPTLVVRGKTISGDFRVFRAA
Ga0265339_103740962	3300031249	Rhizosphere	DLSSDVPLASAPGESDGGGPVVIVRGKTVSGDFKVARAA
Ga0265331_101341091	3300031250	Rhizosphere	DVPLASAPGESDGGGPVVIVRGKTVSGDFKVARAA
Ga0265316_107829021	3300031344	Rhizosphere	GDLSSDVPLASAPGESDGGGPVVIVRGKTVSGDFKVARAA
Ga0306917_111327301	3300031719	Soil	LSSEVPLSGTRNDGPGPTLVVRSKTVSGDFRVVRAA
Ga0307477_103519742	3300031753	Hardwood Forest Soil	PGTNLDVDAGSVSGDLTSEVPLGSDAGAVGDGPTLVVRGRTVSGDFKVFRAA
Ga0307477_106789272	3300031753	Hardwood Forest Soil	DVDAASASGELSSEVPLSGTPGDNAGPTVVVRGNTVSGDFRVFRAA
Ga0308175_1006484181	3300031938	Soil	ANSVSGDLESDVPLASDPSGANGEGPTLVVRGKTVSGDFRLVRG
Ga0308174_104275422	3300031939	Soil	SGDIRVGVAAGTNVDVDANSVSGDLDSEVPLGTDIGLAPGPTLVVRGKTVSGDFRLVRAG
Ga0306920_1042696622	3300032261	Soil	LSSEVPLSGERSEGPGPTLVVRSKTVSGDFRVVRAA
Ga0306920_1043299292	3300032261	Soil	GDLTSEVPLSAVPSGEADPTLVVRGKTVSGDVRLVRAG
Ga0335080_102597983	3300032828	Soil	SGELSSEVPLASSPELAGAGDGPTVVVRGKTVSGDFHVFRAA
Ga0335083_103205071	3300032954	Soil	SSDVPLTSDPGEGGDGPTVILRGKTVSGDLKVFRSI
Ga0335083_108073272	3300032954	Soil	TSEVALADTPGAAGAGPTVVVRGKTVSGDFRVFRAA