Metagenome / Metatranscriptome Family F076552

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076552
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	85 residues
Representative Sequence	MKIYSYSKSILSVIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLS
Number of Associated Samples	101
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.90 %
% of genes near scaffold ends (potentially truncated)	98.31 %
% of genes from short scaffolds (< 2000 bps)	91.53 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.153 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.186 % of family members)
Environment Ontology (ENVO)	Unclassified (38.136 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.610 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.05% β-sheet: 12.28% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00723	Glyco_hydro_15	5.93
PF00106	adh_short	1.69
PF07883	Cupin_2	1.69
PF07690	MFS_1	0.85
PF13884	Peptidase_S74	0.85
PF01527	HTH_Tnp_1	0.85
PF02254	TrkA_N	0.85
PF00903	Glyoxalase	0.85
PF13683	rve_3	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	5.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	73.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	73.73 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	68.64 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.54 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.64 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.54 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.64 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.69 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.64 %
Anabaena	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena	0.85 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.64 %
Anabaena cylindrica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → Anabaena cylindrica	0.85 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.85 %
Unclassified	root	N/A	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG02IY5R4	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300004114\|Ga0062593_101697911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	690	Open in IMG/M
3300004479\|Ga0062595_100240374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1164	Open in IMG/M
3300004480\|Ga0062592_101800282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300005166\|Ga0066674_10195657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	962	Open in IMG/M
3300005171\|Ga0066677_10556338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300005175\|Ga0066673_10234879	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300005180\|Ga0066685_10672394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300005181\|Ga0066678_11067183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300005333\|Ga0070677_10269503	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300005335\|Ga0070666_10662843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	764	Open in IMG/M
3300005338\|Ga0068868_100133289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2035	Open in IMG/M
3300005338\|Ga0068868_100998396	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300005354\|Ga0070675_100929138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300005355\|Ga0070671_100630383	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300005355\|Ga0070671_101423582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300005366\|Ga0070659_101779478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300005367\|Ga0070667_100276679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1506	Open in IMG/M
3300005437\|Ga0070710_11546236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → Anabaena cylindrica	500	Open in IMG/M
3300005439\|Ga0070711_100509336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	993	Open in IMG/M
3300005440\|Ga0070705_100406959	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1009	Open in IMG/M
3300005447\|Ga0066689_10228693	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1138	Open in IMG/M
3300005459\|Ga0068867_100380325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1186	Open in IMG/M
3300005548\|Ga0070665_100251200	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300005554\|Ga0066661_10792298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300005557\|Ga0066704_11011636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300005559\|Ga0066700_10223802	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300005559\|Ga0066700_11125635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300005560\|Ga0066670_10641744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300005560\|Ga0066670_10818357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300005563\|Ga0068855_101131596	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005568\|Ga0066703_10407018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	817	Open in IMG/M
3300005575\|Ga0066702_10551516	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	697	Open in IMG/M
3300005576\|Ga0066708_10357015	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300005586\|Ga0066691_10619763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300006028\|Ga0070717_10349095	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300006032\|Ga0066696_10188528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1309	Open in IMG/M
3300006163\|Ga0070715_10253691	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300006163\|Ga0070715_10822428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	566	Open in IMG/M
3300006794\|Ga0066658_10413081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300006797\|Ga0066659_10599980	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300006806\|Ga0079220_10700705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	744	Open in IMG/M
3300006954\|Ga0079219_10194429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1142	Open in IMG/M
3300009012\|Ga0066710_100693524	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300009012\|Ga0066710_102576981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300009162\|Ga0075423_13053798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300009162\|Ga0075423_13106118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300010326\|Ga0134065_10110714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	922	Open in IMG/M
3300010335\|Ga0134063_10230400	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300010396\|Ga0134126_11689465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300010397\|Ga0134124_11440278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300010401\|Ga0134121_12389824	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300010401\|Ga0134121_12737229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300012201\|Ga0137365_10100675	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2175	Open in IMG/M
3300012201\|Ga0137365_10643311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300012202\|Ga0137363_11289358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300012205\|Ga0137362_10538003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1009	Open in IMG/M
3300012206\|Ga0137380_11540537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300012211\|Ga0137377_10494239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1162	Open in IMG/M
3300012211\|Ga0137377_11299790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300012361\|Ga0137360_11588268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300012361\|Ga0137360_11700878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300012924\|Ga0137413_10311526	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300012927\|Ga0137416_11743087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300012975\|Ga0134110_10459387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300012977\|Ga0134087_10390702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300012977\|Ga0134087_10748327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300012986\|Ga0164304_10122872	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300012987\|Ga0164307_10986826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300013100\|Ga0157373_10864984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300013296\|Ga0157374_10166656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2147	Open in IMG/M
3300013297\|Ga0157378_10112396	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300013297\|Ga0157378_12897919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300013306\|Ga0163162_10315082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1697	Open in IMG/M
3300013307\|Ga0157372_11156768	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300014157\|Ga0134078_10080890	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300014166\|Ga0134079_10068504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1290	Open in IMG/M
3300015371\|Ga0132258_12954460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1180	Open in IMG/M
3300015373\|Ga0132257_100172511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2548	Open in IMG/M
3300018066\|Ga0184617_1045354	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300018482\|Ga0066669_11283694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300019362\|Ga0173479_10131504	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300019868\|Ga0193720_1002888	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300019875\|Ga0193701_1025540	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300019878\|Ga0193715_1097763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300019882\|Ga0193713_1153474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300020001\|Ga0193731_1006171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3059	Open in IMG/M
3300020001\|Ga0193731_1022203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1662	Open in IMG/M
3300020004\|Ga0193755_1121372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300020006\|Ga0193735_1170134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300020018\|Ga0193721_1008350	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300021088\|Ga0210404_10624985	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300021178\|Ga0210408_11262783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300021475\|Ga0210392_10096238	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300022534\|Ga0224452_1073070	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1035	Open in IMG/M
3300022726\|Ga0242654_10434697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300023058\|Ga0193714_1003696	Not Available	2484	Open in IMG/M
3300024288\|Ga0179589_10162248	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300025315\|Ga0207697_10026417	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2374	Open in IMG/M
3300025899\|Ga0207642_10353711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	867	Open in IMG/M
3300025903\|Ga0207680_10212718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1322	Open in IMG/M
3300025915\|Ga0207693_10347868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1160	Open in IMG/M
3300025928\|Ga0207700_10428479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1163	Open in IMG/M
3300025932\|Ga0207690_11419536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300025933\|Ga0207706_11385925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300025939\|Ga0207665_10243817	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1325	Open in IMG/M
3300025939\|Ga0207665_10726137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	782	Open in IMG/M
3300025939\|Ga0207665_10829822	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300026023\|Ga0207677_12084098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300026308\|Ga0209265_1125708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300026325\|Ga0209152_10119580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1002	Open in IMG/M
3300026325\|Ga0209152_10165113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	834	Open in IMG/M
3300026527\|Ga0209059_1187897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300026540\|Ga0209376_1119675	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300026548\|Ga0209161_10351614	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300026552\|Ga0209577_10360661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1066	Open in IMG/M
3300027748\|Ga0209689_1383469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300028796\|Ga0307287_10293633	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.27%
Host-Associated	Host-Associated	23.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.58%
Plants	Host-Associated → Plants	23.73%
Aquatic	Environmental → Aquatic	1.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.47%
Sediment	Environmental → Aquatic → Sediment	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.56%
Loam	Environmental → Terrestrial → Soil → Loam	11.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_09524870	2170459009	Grass Soil	MKIYNYSKSILSVIFAAALLIGVAHAQTTSVTTGSELESTGVISEYTPGSALVLDIGTGEPVQFQLSQN
Ga0062593_1016979112	3300004114	Soil	MKIYSYSKSILSVIFAATLLIGVAHAQTSSVTTGSELESTGTISEYTPGSDLVLDIGIGEPVQFQLSQNVVY
Ga0062595_1002403741	3300004479	Soil	MKIYSYSKSILGVIFAIALLIGIAHAQTTSVTTGSELESTGTISEYTPGSDLVLDIGIGELVQFKLSQNVVYADPDGTVLEAPGLS
Ga0062592_1018002821	3300004480	Soil	MKIYSKSILGVIFAAGLLIGVAHAQTPGVVTGPELESTGVIADYTDNALVLDIGIGEPVQFKLSPNVVYVDSD
Ga0066674_101956571	3300005166	Soil	MKIYSYSKSILGVIFTTALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVIYADPDGTVLE
Ga0066677_105563381	3300005171	Soil	MKICSYSKSILAAIFAAAFLIGVAHGQTSSVTTGSELESTGIISEYTPGSALVLDIGTGEPVQFKLSPNVVYADPDGTVLEAPGLSTNLRIRVYYI
Ga0066673_102348792	3300005175	Soil	MKIYSYSKSILGVIFASALLIGVAHAQTSGVTTGSESESTGTITEYTPGSELVLDIGTGEPVQFKLSQN
Ga0066685_106723942	3300005180	Soil	MKIYSYSKSILGVIFTTALLIAVAHAQTSSVTTGSELESTGTITEYTPGSALVLDIGTGEPVQFKLSQN
Ga0066678_110671831	3300005181	Soil	MKICSYSKSILAAIFAAAFLIGVAHGQTSSVTTGSELESTGIISEYTPGSALVLDIGTGEPVQFKLS
Ga0070677_102695031	3300005333	Miscanthus Rhizosphere	MKIHSYSKSILAVIFAAALLIGVAHAQTTSVTTGSELESTGIITEYTPGSELVLDIGIGDPVQFKLSQNVVYVDSDGTELEAPALSTN
Ga0070666_106628432	3300005335	Switchgrass Rhizosphere	MKIYSHSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGGALVLDIGTGELVQFQLSQNVVYADPDGTV
Ga0068868_1001332891	3300005338	Miscanthus Rhizosphere	MKIHSYSKSILAVIFAAALLIGVAHAQTTSVTTGSELESTGVISEYTPGSALVLDIGTGEPVQFQLSQNVVYADPDGTVLEAPG
Ga0068868_1009983961	3300005338	Miscanthus Rhizosphere	MKIHSYSKSILGAIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGGALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPG
Ga0070675_1009291381	3300005354	Miscanthus Rhizosphere	MKIYSYSKSILSVIFAATLLIGVAHAQTSSVTTGSELESTGTISDYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLE
Ga0070671_1006303832	3300005355	Switchgrass Rhizosphere	MKIYSYSKSILAVIFATALLIGVAHAQTTSVTTGSELESTGVISEYTPGSALVLDIGTGEPVQFQLSQNVVYADPDGTV
Ga0070671_1014235822	3300005355	Switchgrass Rhizosphere	MKIYSYSKSILSVIFAAALLIGVAHAQTSSVTTGSELESTGTISDYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLE
Ga0070659_1017794781	3300005366	Corn Rhizosphere	MKIYSYSKSILAVIFATALLIGVAHAQTTSVTTGSELESTGVISEYTPGSALVLDIGTGEPVQFQLSQNVVYADPDGTVLEAPG
Ga0070667_1002766793	3300005367	Switchgrass Rhizosphere	MKIYSHSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPDTELVLDIGTGEPVQFKLSQNVVYADPDGTVLETP
Ga0070710_115462361	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKIHSYSKSILGAIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGGALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGL
Ga0070711_1005093362	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKIYSHSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPDTELVLDIGTGEPVQFKLSQN
Ga0070705_1004069591	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKIYSHSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPDTELVLDIGTGEPVQFKLSQNVVYADSDGTVLEAPGL
Ga0066689_102286931	3300005447	Soil	MKIYSYSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSDKVVYADSDGTVLEA
Ga0068867_1003803252	3300005459	Miscanthus Rhizosphere	MKIYSYSKSILAVIFATALLIGVAHAQTTSVTTGSELESTGVISEYTPGSALVLDIGTGEPVQFQLSQNVVYADPDGTVLEAPGLS
Ga0070665_1002512001	3300005548	Switchgrass Rhizosphere	MKIYSKILGVIFAAGLLIEVAHAQSPGVGTGPELESTGVIADYTDNALVLDIGIGEPVQFKLSSNVVYVDSDGTV
Ga0066661_107922981	3300005554	Soil	MKIYSYSKSILGVIFATALLIGVAHAQTSGVTTGSELESTGTITEYTPDTALVLDIGTGDLVQFKLSQNVVYADPDGTVLEAPGL
Ga0066704_110116362	3300005557	Soil	MKIYSYSKSILGVIFTTALLIAVAHAQTSSVTTGSELESTGTITEYTPGSALVLDIGTGEPVQFKLSQNVV
Ga0066700_102238021	3300005559	Soil	MKIYSYSKSILAVIFAAALLIEVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVIYADPDGTVLEAPGLSTN
Ga0066700_111256351	3300005559	Soil	MKIYSYSKSILAVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSQNVVYADPDGTVLEAPGLSTNLRIRVY
Ga0066670_106417442	3300005560	Soil	MKIYSYSKSILGVIFATALLTGAAHAQTSSITTGPEFESTGTIMEYTPGSALVLDIGTGEPVQFKLSPNVVYADPDGTV
Ga0066670_108183571	3300005560	Soil	MKIYSYSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSDKVVYADSDGTVLEAPGLRTNLRIRVYYI
Ga0068855_1011315962	3300005563	Corn Rhizosphere	MKIYSYSKSILAVIFATALLIGVAHAQTTSVTTGSELESTGVISEYTPGNALVLDIGTGEPVQFQLSQNVVYADPDGTVLETPGLSTN
Ga0066703_104070182	3300005568	Soil	MKIYSYSKSILGVIFTTALLIAVAHAQTSSVTTGSELESTGTITEYTPGSALVLDIGTGELAQFQLSQNVVYADPDGTVL
Ga0066702_105515161	3300005575	Soil	MKIYSYSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSDKVVYADSDGTVLEAPGLSTN
Ga0066708_103570151	3300005576	Soil	MKIYSYSKSILGVIFATALLTGAAHAQTSSITTGPEFESTGTIMEYTPGSALVLDIGTGEPVQFKLSPNVVYADPDGTVLEAPGLSTNLRIRVYYI
Ga0066691_106197632	3300005586	Soil	MKIYSYSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSQNVVYADPDGTVLE
Ga0070717_103490951	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKIHSYSKSILGAIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLE
Ga0066696_101885281	3300006032	Soil	MKIYYRSNQTIMKIYSYSKSILGVIFTTALLIAVAHAQTSSVTTGSELESTGTITEYTPGSALVLDIGTGEPVQFKLSQN
Ga0070715_102536911	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKIHSYSKSILGAIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGGALVLDIGTGELVQFQLSQNVVYADPDGTVLEA
Ga0070715_108224281	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKIYSCSKSILGAICATALLIGVAHSQTSSVTTGSELESTGTISEYTPGSELVLDIGTGEPVQFKLSQNVVYDDSDGTVLEAPGLSTNLRIRVYYIEVG
Ga0066658_104130812	3300006794	Soil	MKVYNKSILGVIFAAALLMGVAHAQTSSTKTGSELESTGTISEYTPGSALVMDIGSDEPVQFKLSQNVVYVDSD
Ga0066659_105999801	3300006797	Soil	MKIYSYSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSDKVVYADSDGTELEAPGLSTNLRIRVYYIRVG
Ga0079220_107007051	3300006806	Agricultural Soil	MKIYSKILGVIFAASLLIEVAHAQTPDVVTGPELESTGVITDYTDNALVLDIGIGEPVQFKLSSNVVYVDSEGTVLEAPALSTNSRIRVD
Ga0079219_101944291	3300006954	Agricultural Soil	MKIYSKILGVIFAAGLLIGVAHAQTPSVVTGPELESTGVIADYTDNALVLDIGIGEPVQFKLSSNVVYVDSDGTVLESPALSTNSRIR
Ga0066710_1006935241	3300009012	Grasslands Soil	MKIYSYSKSILAVIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALFLDIGTGERVQFQLRQNVIYAHPDGTVLEAPGLGTNQRIRVYYIQVGGDNVVD
Ga0066710_1025769813	3300009012	Grasslands Soil	MKIYSYSKSILGVIFATALLTGAAHAQTSSITTGPEFESTGTIMEYTPGSALVLDIGTGEPVQFKLSPNVVY
Ga0075423_130537981	3300009162	Populus Rhizosphere	MKIYSYSKSILSVIFAATLLIGVAHAQTSSVTTGSELESTGIISDYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLSTNERIRVYYIRVGEDNV
Ga0075423_131061181	3300009162	Populus Rhizosphere	MKTYSYSKSILGAIFAAALLIGVAHAQTSSVTTGSELESTGIISEYTPGTELVLDIGIGDPVQFKLSQNVVYADPDGTVLEAPGLSTNERIRVYYIRV
Ga0134065_101107141	3300010326	Grasslands Soil	MKIYSYSKSILAVIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVIYADPDGTVLEAPGLSTNQRIRVYY
Ga0134063_102304003	3300010335	Grasslands Soil	MKIYSYSKSILGVIFATALLTGAAHAQTSSITTGPEFESTGTIMEYTPGSALVLDIGTGEPVQFKLSPNVVYAD
Ga0134126_116894651	3300010396	Terrestrial Soil	MKIYSYSKSILAVIFATALLIGVAHAQTTSVTTGSELESTGVISEYTPGSALVLDIGTGEPVQFQLSQNVVYADPDGTVLEAPGLSTNLRIRVYYIEVGGDN
Ga0134124_114402781	3300010397	Terrestrial Soil	MKIYSYSKSILGAICATALLIGVAHSQTSSLTTGSELESTGTISEYTPGSELVLDIGTGEPVQFKLNRN
Ga0134121_123898241	3300010401	Terrestrial Soil	MKICSYSKSILGAICATALLIGVAQAQTSSVTTGSELESTGTISEYTPGSDLVLDIGTGEPVQFKLSQNVV
Ga0134121_127372291	3300010401	Terrestrial Soil	MKIHSYSKSILGAIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGGALVLDIGTGELVQFQLSQNVVYADPDGTVLE
Ga0137365_101006753	3300012201	Vadose Zone Soil	MKIYSYSRSILGLIFAATLLIAFAHAQTSSITTGSELESTGTISEYTPGSALVLDIGIGELVQFKLSQNVVYADSDGTVLEAPGLS
Ga0137365_106433111	3300012201	Vadose Zone Soil	MKIYNYSKSILGVIFAAALLIGFAHAQTSTVTTGSELESTGTISEYTPGSALVLDIGTGELVQFKLSQNVVYAD
Ga0137363_112893581	3300012202	Vadose Zone Soil	MKIYSYSKSILGVICATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVIYADPDGTVLEAPGL
Ga0137362_105380032	3300012205	Vadose Zone Soil	MRIYSCSKSILGVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFQLSQNVVYADPDGTVLETPGLSTNQRIRVYYIRVGEDNVVDKVT
Ga0137380_115405371	3300012206	Vadose Zone Soil	MKIYSYSKSILGVIFAAALLIGFAHAQTSSVTTGSELESTGTITEYTPGSALVLDIGTGELVQFKLSQN
Ga0137377_104942391	3300012211	Vadose Zone Soil	MKIYSYSKSILAVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVIYADPDGTVLEAPGLSTNQRIRVYYIQV
Ga0137377_112997901	3300012211	Vadose Zone Soil	MKIYSYSKSILGVICATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFKLSDKVVYADSDGTVLEAPGLSTNLRIRVYYIRVGEDNVVD
Ga0137360_115882681	3300012361	Vadose Zone Soil	MKIYSYSKSILGVIFASALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSQNVVYADPDGTVLEAPGLSTNLRIRVYYIQVGGDNVVD
Ga0137360_117008781	3300012361	Vadose Zone Soil	MKIYSYSKSILGVICATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSDKVVYADSD
Ga0137413_103115262	3300012924	Vadose Zone Soil	MKIYSYSKSILAVIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVIYADPDGTVLE
Ga0137416_117430871	3300012927	Vadose Zone Soil	MNIYSYSKSILGVICATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSQNVVYADPDGTVLE
Ga0134110_104593871	3300012975	Grasslands Soil	MKIYSYSKSILGVIFATALLTGAAHAQTSSITTGPEFESTGTIMEYTPGSALVLDIGTGEPVQFKLSQNIVYADPDGTVLEAPGL
Ga0134087_103907022	3300012977	Grasslands Soil	MKIYSYSKSILGVIFATALLTGAAHAQTSSITTGPEFESTGTIMEYTPGSALVLDIGTGEPVQFKLSPNVVYADPDGTVLEAPGLSTN
Ga0134087_107483271	3300012977	Grasslands Soil	MKICSYSKSILGAIFAAAFLIGVAHGQTSSVTTGSELESTGIISEYTPGSALVLDIGTGEPVQFKLSPNVVYADPDGTVLEAPGLS
Ga0164304_101228723	3300012986	Soil	MKIYSKSILSVIFASALLIGVAHAQTSSVTTGSELESTGTITEYTPGSELVLDIGIGDPVQFKLSQNV
Ga0164307_109868261	3300012987	Soil	MKIYSYSKSILGAICATALLIGVAHSQTSSLTTGSVLESTGTISEYTPGSELVLDIGTGEPVQFKLNQNVVYDDSDGTVLEAPGLSTNLRIRVYYIEVGGDNL
Ga0157373_108649841	3300013100	Corn Rhizosphere	MKIYSHSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSDLVLDIGIGEPVQFKLSQNVVYADPDGTVLEAP
Ga0157374_101666564	3300013296	Miscanthus Rhizosphere	MKIYSYSKSILAVIFAAALLIGVAHAQTTSVTTGSELESTGVISEYTPGSALVLDIGTGEPVQFQLSQNVVYADPDGTVLEAPGL
Ga0157378_101123964	3300013297	Miscanthus Rhizosphere	MKIYSYSKSILAVIFATALLIGVAHAQTTSVTTGSELESTGVISEYTPGNALVLDIGTGEPVQFQLSQNVVYADPDGTVLEAPGL
Ga0157378_128979192	3300013297	Miscanthus Rhizosphere	MKIYSYSKSILGAICATALLIGVAHSQTSSLTTGSELESTGTISEYTPGSELVLDIGTGEPVQFKLSQNVIYDDADGTALETPGLSTNLRIRVYYIEVGGD
Ga0163162_103150823	3300013306	Switchgrass Rhizosphere	MKIYSYSKSILSVIFAATLLIGVAHAQTSSVTTGSELESTGTISDYTPGSALVLDIGIGEPVQFQLSQNVVYVDPDGTVLEAPGLSTNERIRVYYIRV
Ga0157372_111567681	3300013307	Corn Rhizosphere	MKIHSYSKSILGAIFATALLIGVAHAQTSSVTTGSELESTATISEYTPDTELVLDIGTGEPVQFKLSQNVVYADSDGTVLEAPG
Ga0134078_100808902	3300014157	Grasslands Soil	MKIYSYSKSILAVIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGERVQFQLSQNV
Ga0134079_100685043	3300014166	Grasslands Soil	MKICSYSKSILGAIFAAAFLIGVAHGQTSSVTTGSELESTGIISEYTPGSALVLDIGTGEPVQFKLSPNVVYADPDGTVLEAPGLGPNLRIRVYYI
Ga0132258_129544601	3300015371	Arabidopsis Rhizosphere	MKIYSYSKSILGVIFATALLMGVAYAYTSSVTGTISEYTPGSELVLDIGTGEPVQFKLSQNVVYVDSDGTVLEAPGLSTNLRIHVQYVEVGGDN
Ga0132257_1001725113	3300015373	Arabidopsis Rhizosphere	MKIYSYSKSILSVICATALLIGVAHAQTSTVTTGSELESTGTISEYTPGSDLVLDIGTGEPVQFKLSQNVVYADPDGTVLEAPGL
Ga0184617_10453542	3300018066	Groundwater Sediment	MKIHSYSKSILGAVCAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYAD
Ga0066669_112836941	3300018482	Grasslands Soil	MKIYSYSKSILGVIFATALLTGVAHAQTSSITTGSEFESTGTIMEYTPGSALVLDIGTGEPVQFKLSPNVVYADPDGTVLEAPGLSTNLRIRV
Ga0173479_101315041	3300019362	Soil	MKIHSYSKSILAVIFATALLIGVAHAQTTSVTTGSELESTGVISEYTPGSALVLDIGTGEPVQFQLSQNVVYADPDGTVLEAPG
Ga0193720_10028883	3300019868	Soil	MKIHSYSKSILGAIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLSTNQRIRVYYIE
Ga0193701_10255401	3300019875	Soil	MKIHSYSKSILGAVCAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGKLVQFTFSDKV
Ga0193715_10977631	3300019878	Soil	MKIHSYSKSILGAIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLSTNQRIRVYYIA
Ga0193713_11534741	3300019882	Soil	MKIHSYSKSILGAVCAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLSTNQRIRVYYIEVGGDNVVD
Ga0193731_10061712	3300020001	Soil	MKIYSYSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSDKVVYADSDGTVLEAPGLSTNLRIRVYPIRRIPAGY
Ga0193731_10222031	3300020001	Soil	MKIYSYSKSILSVIFATALLMGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVIYADPDGTVLEAPGLS
Ga0193755_11213721	3300020004	Soil	MKIHSYSKSILGAICAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQSFTPIQTERCLKLPD
Ga0193735_11701342	3300020006	Soil	MKIHSYSKSILGAIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGGALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLSTNQRI
Ga0193721_10083501	3300020018	Soil	MYYQTNEIIMKIYRYSKSILGVIFAIALLTGSAHAQTSSITTGSELESTGTISEYTPGSTLVLDIGTGELVQFKL
Ga0210404_106249852	3300021088	Soil	MKTYNYSKSILAVIFAAALMIGVAHAQTTSVTTGSELESTGTISEYTPGSELVLDIGTGEPVQFKLNQNVVYDD
Ga0210408_112627831	3300021178	Soil	MKTYSYSKSILAVIFAAALMIGVAHAQTSNVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLNTNLRIRVYYIEVGGDNVV
Ga0210392_100962382	3300021475	Soil	MKIHSYSKSILGAIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGEPVQFQLSQNVVYDDSDGTVLEAPGLS
Ga0224452_10730702	3300022534	Groundwater Sediment	MKIYSYSKSILGVIFAIALLTGIAHAQTTSVTTGSELESTGTISEYTPGGDLVLDIGIGELVQFKLSQNVVYADTDGTVLEAPGLSTNLRIRVYYI
Ga0242654_104346971	3300022726	Soil	MKIYSYSKSILAVIFAAALMIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLETPGLSTNLRIRVYYIEVGGDNV
Ga0193714_10036962	3300023058	Soil	MKIHSYSKSILGAIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLSTNQRI
Ga0179589_101622482	3300024288	Vadose Zone Soil	MKTHSYSKSILGAICAAALLIGVAHAETSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQ
Ga0207697_100264171	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MKIYSYSKSILGAICATALLIGVAQAQTSSVTTGSELESTGTISEYTPGGDLVLDIGTGELVQFKLSQNVVYADPDGTVLEA
Ga0207642_103537111	3300025899	Miscanthus Rhizosphere	MKIHSYSKSILAVIFAAALLIGVAHAQTSSVTTGSEWESTGTISEYTPDTELVLDIGTGEPVQFQLSQNVVYADPDGTVLEAPGLSTNQRIRVYY
Ga0207680_102127182	3300025903	Switchgrass Rhizosphere	MKIYSHSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPDTELVLDIGTGEPVQFKLSQNVV
Ga0207693_103478681	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTIYSYSKSILGVIFATALLIGVAHAHTSTVTGTISEYTPGSELVLDIGTGEPVQFKLSQNVVYVDSDGTMLEAPGLTTNLRIHVQY
Ga0207700_104284791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKIYSYSKSILGVIFAAALLTGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLEAP
Ga0207690_114195361	3300025932	Corn Rhizosphere	MKIYSYSKSILAVIFATALLIGVAHAQTTSVTTGSELESTGVISEYTPGSALVLDIGTGEPVQFQLSQNVVYADPDGTVLEAPTANVFWREGDR
Ga0207706_113859251	3300025933	Corn Rhizosphere	MKIYSCSKSILGAICATALLIGVAHSQTSSVTTGSELESTGTISEYTPGSELVLDIGTGEPVQFKLNQNVV
Ga0207665_102438171	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKIYSYSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGGALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLS
Ga0207665_107261372	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKICSYSKSILGAICATALLIGVAQAQTSSVTTGSELESTGTISEYTPGGDLVLDIGTGELVQFKLS
Ga0207665_108298221	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKIYSYSKSILSVIFAAALLIGVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLS
Ga0207677_120840981	3300026023	Miscanthus Rhizosphere	MKIHSYSKSILGAIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGGALVLDIGTGELVQFQLSQNVVYADPDGTVLEAPGLSTN
Ga0209265_11257081	3300026308	Soil	MKIYSYSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSDKVVYADSDGTVLEAPGLSTNLRIRVYYIRVGEDNV
Ga0209152_101195802	3300026325	Soil	MKIYSYSKSILAVIFAAALLIEVAHAQTSSVTTGSELESTGTISEYTPGSALVLDIGTGELVQFQLSQNVIYADPDGTVLEAPGLSTNQRIRVYY
Ga0209152_101651131	3300026325	Soil	MKIYSYSKSILGVIFAAALLIAVAHAQTSSVTTGSELESTGTITEYTPGSALVLDIGTGEPVQFKLSQNIVYA
Ga0209059_11878971	3300026527	Soil	MKIYSYSKSILSVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSDKVVYADSDGTVLEAPGLSTNLRIR
Ga0209376_11196753	3300026540	Soil	MKICSYSKSILAAIFAAAFLIGVAHGQTSSVTTGSELESTGIISEYTPGSALVLDIGTGEPVQFKLSPNVVYADPDGTVLE
Ga0209161_103516141	3300026548	Soil	MKIYSYSKSILGVIFATALLIGVAHAQTSSVTTGSELESTGTITEFTPGSELVLDIGTGELVQFKLSDKVVYADSD
Ga0209577_103606613	3300026552	Soil	MKIYSYSKSILSVIFAGALLIGVAHAQTSSVTPGSELESTGTISEYTPGSELILDIGTGELVQFRLSQNVVYADPDGTVLEAPGLSTNLRIRVYYIRAG
Ga0209689_13834691	3300027748	Soil	MKIYSYSKSILAVIFATALLIGVAHAQTSSVTTGSELESTGTISEYTPGSELVLDIGTGELVQFKLSQNVVYADPDGT
Ga0307287_102936332	3300028796	Soil	MKIHTYSKSILGAVCAAALLIGVAHAQTSSVTTGSELESTGTISEFTPGSALVLDIGTGELVQFQLSQNVVYAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences