Metagenome / Metatranscriptome Family F076537

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076537
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	59 residues
Representative Sequence	MNSNYEIFKQRSDGSFVRIEGVKNIDQAKVDLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Number of Associated Samples	73
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.14 %
% of genes near scaffold ends (potentially truncated)	17.80 %
% of genes from short scaffolds (< 2000 bps)	83.90 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.390 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.271 % of family members)
Environment Ontology (ENVO)	Unclassified (51.695 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.169 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.09% β-sheet: 25.29% Coil/Unstructured: 58.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF12732	YtxH	5.93
PF11154	DUF2934	2.54
PF13676	TIR_2	1.69
PF00239	Resolvase	1.69
PF01152	Bac_globin	1.69
PF01740	STAS	1.69
PF14534	DUF4440	1.69
PF04226	Transgly_assoc	0.85
PF13620	CarboxypepD_reg	0.85
PF13432	TPR_16	0.85
PF07238	PilZ	0.85
PF03932	CutC	0.85
PF00990	GGDEF	0.85
PF12705	PDDEXK_1	0.85
PF00069	Pkinase	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.39
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.69
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	1.69
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.69
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.85
COG3142	Copper homeostasis protein CutC	Inorganic ion transport and metabolism [P]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.24 %
Unclassified	root	N/A	45.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.39 %
Unclassified	root	N/A	45.76 %
Viruses	superkingdom	All Organisms → Viruses	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.39 %
Unclassified	root	N/A	45.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	45.76 %
Unclassified	root	N/A	45.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.32 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.32 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.85 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10032819	All Organisms → cellular organisms → Bacteria → Acidobacteria	2153	Open in IMG/M
3300001867\|JGI12627J18819_10103845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300002245\|JGIcombinedJ26739_100233788	Not Available	1728	Open in IMG/M
3300003505\|JGIcombinedJ51221_10130075	All Organisms → cellular organisms → Bacteria → Acidobacteria	1012	Open in IMG/M
3300005434\|Ga0070709_10566994	Not Available	870	Open in IMG/M
3300005436\|Ga0070713_101258850	Not Available	716	Open in IMG/M
3300005436\|Ga0070713_102318124	Not Available	519	Open in IMG/M
3300005538\|Ga0070731_10098491	All Organisms → cellular organisms → Bacteria → Acidobacteria	1936	Open in IMG/M
3300005538\|Ga0070731_10164137	All Organisms → cellular organisms → Bacteria → Acidobacteria	1475	Open in IMG/M
3300005538\|Ga0070731_10397107	Not Available	917	Open in IMG/M
3300005541\|Ga0070733_10330199	All Organisms → cellular organisms → Bacteria → Acidobacteria	1010	Open in IMG/M
3300005542\|Ga0070732_10255256	Not Available	1050	Open in IMG/M
3300005602\|Ga0070762_10245329	Not Available	1112	Open in IMG/M
3300005610\|Ga0070763_10889252	Not Available	530	Open in IMG/M
3300005921\|Ga0070766_10062544	All Organisms → cellular organisms → Bacteria → Acidobacteria	2122	Open in IMG/M
3300005921\|Ga0070766_10306726	Not Available	1021	Open in IMG/M
3300005921\|Ga0070766_10446854	Not Available	853	Open in IMG/M
3300006163\|Ga0070715_10640841	Not Available	628	Open in IMG/M
3300006176\|Ga0070765_100445680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300006176\|Ga0070765_100981333	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300006176\|Ga0070765_101851712	Not Available	566	Open in IMG/M
3300009143\|Ga0099792_10679842	Not Available	664	Open in IMG/M
3300011120\|Ga0150983_14203655	Not Available	542	Open in IMG/M
3300011120\|Ga0150983_15596575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300011120\|Ga0150983_16078464	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300011120\|Ga0150983_16476252	Not Available	698	Open in IMG/M
3300012202\|Ga0137363_11444869	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300012205\|Ga0137362_10475819	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300012361\|Ga0137360_10339063	Not Available	1256	Open in IMG/M
3300012683\|Ga0137398_10094455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1870	Open in IMG/M
3300012917\|Ga0137395_10477781	Not Available	896	Open in IMG/M
3300012923\|Ga0137359_10331115	All Organisms → cellular organisms → Bacteria → Acidobacteria	1354	Open in IMG/M
3300012923\|Ga0137359_10381835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1251	Open in IMG/M
3300012924\|Ga0137413_10229368	Not Available	1264	Open in IMG/M
3300015242\|Ga0137412_10582393	Not Available	849	Open in IMG/M
3300020579\|Ga0210407_10032385	All Organisms → cellular organisms → Bacteria → Acidobacteria	3891	Open in IMG/M
3300020579\|Ga0210407_10163864	All Organisms → cellular organisms → Bacteria → Acidobacteria	1717	Open in IMG/M
3300020580\|Ga0210403_10061727	All Organisms → cellular organisms → Bacteria → Acidobacteria	3004	Open in IMG/M
3300020580\|Ga0210403_10134939	All Organisms → cellular organisms → Bacteria → Acidobacteria	2013	Open in IMG/M
3300020580\|Ga0210403_10416434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300020581\|Ga0210399_10156546	Not Available	1885	Open in IMG/M
3300020581\|Ga0210399_10489438	All Organisms → cellular organisms → Bacteria → Acidobacteria	1023	Open in IMG/M
3300020581\|Ga0210399_10877857	Not Available	728	Open in IMG/M
3300020582\|Ga0210395_10080083	All Organisms → cellular organisms → Bacteria → Acidobacteria	2406	Open in IMG/M
3300020582\|Ga0210395_10308806	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300020582\|Ga0210395_10359689	All Organisms → cellular organisms → Bacteria → Acidobacteria	1095	Open in IMG/M
3300020583\|Ga0210401_10003343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17177	Open in IMG/M
3300020583\|Ga0210401_10083914	All Organisms → cellular organisms → Bacteria → Acidobacteria	2997	Open in IMG/M
3300021168\|Ga0210406_10171829	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300021168\|Ga0210406_11195784	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300021171\|Ga0210405_10004158	All Organisms → cellular organisms → Bacteria → Acidobacteria	13729	Open in IMG/M
3300021171\|Ga0210405_10035480	All Organisms → cellular organisms → Bacteria	3980	Open in IMG/M
3300021171\|Ga0210405_10076347	All Organisms → cellular organisms → Bacteria → Acidobacteria	2640	Open in IMG/M
3300021180\|Ga0210396_10057126	All Organisms → cellular organisms → Bacteria → Acidobacteria	3566	Open in IMG/M
3300021180\|Ga0210396_10799849	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300021181\|Ga0210388_10628103	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300021403\|Ga0210397_10652807	Not Available	806	Open in IMG/M
3300021403\|Ga0210397_11049620	Not Available	633	Open in IMG/M
3300021404\|Ga0210389_10075846	All Organisms → cellular organisms → Bacteria → Acidobacteria	2579	Open in IMG/M
3300021405\|Ga0210387_10383769	Not Available	1244	Open in IMG/M
3300021420\|Ga0210394_10491335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300021475\|Ga0210392_10655734	Not Available	780	Open in IMG/M
3300021477\|Ga0210398_10959190	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300021479\|Ga0210410_10332022	All Organisms → cellular organisms → Bacteria → Acidobacteria	1364	Open in IMG/M
3300021559\|Ga0210409_11514986	Not Available	547	Open in IMG/M
3300025905\|Ga0207685_10647102	Not Available	571	Open in IMG/M
3300026557\|Ga0179587_10559608	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300027050\|Ga0209325_1003509	Not Available	1567	Open in IMG/M
3300027071\|Ga0209214_1019542	Not Available	864	Open in IMG/M
3300027109\|Ga0208603_1026731	Not Available	914	Open in IMG/M
3300027371\|Ga0209418_1012446	Not Available	1353	Open in IMG/M
3300027502\|Ga0209622_1040422	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300027548\|Ga0209523_1006885	All Organisms → cellular organisms → Bacteria → Acidobacteria	1992	Open in IMG/M
3300027575\|Ga0209525_1020905	Not Available	1606	Open in IMG/M
3300027576\|Ga0209003_1021042	Not Available	1059	Open in IMG/M
3300027869\|Ga0209579_10033774	All Organisms → cellular organisms → Bacteria → Acidobacteria	2780	Open in IMG/M
3300027869\|Ga0209579_10054203	All Organisms → cellular organisms → Bacteria → Acidobacteria	2133	Open in IMG/M
3300027889\|Ga0209380_10180852	All Organisms → cellular organisms → Bacteria → Acidobacteria	1236	Open in IMG/M
3300027889\|Ga0209380_10282104	Not Available	976	Open in IMG/M
3300027889\|Ga0209380_10344008	Not Available	876	Open in IMG/M
3300027895\|Ga0209624_10374761	Not Available	949	Open in IMG/M
3300028023\|Ga0265357_1007098	Not Available	1075	Open in IMG/M
3300028047\|Ga0209526_10333993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1019	Open in IMG/M
3300028906\|Ga0308309_10067690	All Organisms → cellular organisms → Bacteria → Acidobacteria	2649	Open in IMG/M
3300028906\|Ga0308309_10462252	Not Available	1094	Open in IMG/M
3300028906\|Ga0308309_10642458	All Organisms → cellular organisms → Bacteria → Acidobacteria	921	Open in IMG/M
3300028906\|Ga0308309_10863843	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300030862\|Ga0265753_1008968	Not Available	1265	Open in IMG/M
3300030991\|Ga0073994_11622628	Not Available	537	Open in IMG/M
3300031057\|Ga0170834_108500205	All Organisms → cellular organisms → Bacteria → Acidobacteria	1348	Open in IMG/M
3300031057\|Ga0170834_112560424	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300031122\|Ga0170822_15331766	Not Available	550	Open in IMG/M
3300031128\|Ga0170823_10381920	Not Available	596	Open in IMG/M
3300031231\|Ga0170824_110357617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300031231\|Ga0170824_112809088	Not Available	769	Open in IMG/M
3300031231\|Ga0170824_114843438	Not Available	742	Open in IMG/M
3300031231\|Ga0170824_114848740	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300031231\|Ga0170824_127684308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300031715\|Ga0307476_11086864	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300031715\|Ga0307476_11326575	Not Available	525	Open in IMG/M
3300031718\|Ga0307474_10134076	Not Available	1863	Open in IMG/M
3300031718\|Ga0307474_10147762	Not Available	1773	Open in IMG/M
3300031720\|Ga0307469_10092560	All Organisms → cellular organisms → Bacteria → Acidobacteria	2093	Open in IMG/M
3300031753\|Ga0307477_10075443	Not Available	2333	Open in IMG/M
3300031753\|Ga0307477_10425639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300031753\|Ga0307477_10806783	Not Available	623	Open in IMG/M
3300031754\|Ga0307475_10467152	All Organisms → Viruses → Predicted Viral	1014	Open in IMG/M
3300031754\|Ga0307475_10590629	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300031823\|Ga0307478_11649103	Not Available	529	Open in IMG/M
3300031962\|Ga0307479_10079121	All Organisms → cellular organisms → Bacteria → Acidobacteria	3181	Open in IMG/M
3300031962\|Ga0307479_10393933	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300031962\|Ga0307479_10777876	Not Available	934	Open in IMG/M
3300032174\|Ga0307470_11155517	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300032180\|Ga0307471_100370542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1550	Open in IMG/M
3300032180\|Ga0307471_102162062	Not Available	700	Open in IMG/M
3300032180\|Ga0307471_103365250	Not Available	566	Open in IMG/M
3300032205\|Ga0307472_100455967	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300032770\|Ga0335085_11897601	Not Available	607	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.15%
Host-Associated	Host-Associated	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.15%
Plants	Host-Associated → Plants	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.10%
Loam	Environmental → Terrestrial → Soil → Loam	32.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	27.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	16.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.25%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	12.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100328192	3300001867	Forest Soil	MNSNYEIFKLRSDGSFVRIEAVKNIDQAKVDLKKLVSGEPGDYRLWDSXXHKFVDXRNR*
JGI12627J18819_101038452	3300001867	Forest Soil	MNSNYEIFKLRSDGSFVRIEGVTNIDQAKTDLKKLVSAVPGDYRLWDSSAHKFVDTRNR*
JGIcombinedJ26739_1002337882	3300002245	Forest Soil	MNSNHEIFRQCSDGSFVRIEGVKSIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR*
JGIcombinedJ51221_101300751	3300003505	Forest Soil	MKSNYEIFRQRSDGSFVRIESAKNIEQAKTDFKKLVSAVPGDYRLWDSSAHKFVDPRNR*
Ga0070709_105669941	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKSNYEIFRQRSDGSFVRIEAVKNIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR*
Ga0070713_1012588502	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKSNYEIFRQRSDGSFVRIEAVKHIDQAKVDLEKLVSGEPGDYRLWDSSAHKFVDPRNR*
Ga0070713_1023181242	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKSNYEIFRQRSDGSFVRIEAVKNIDQAKVDLEKLVSGEPGDYRLWDSSAHKFVDPRNR*
Ga0070731_100984914	3300005538	Surface Soil	MNSNYEIFRQRSDGSFVRIEGVKSIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR*
Ga0070731_101641372	3300005538	Surface Soil	MNSNYEIFKLRSDGSFVRIESVTNIDQAKADLKKLVSGEPGDYRLWDSFAHKFVDPRNR*
Ga0070731_103971072	3300005538	Surface Soil	MKSNYEIFRQRSDGSFVRIESVQNIDQAKTDLNKLVSAVPGDYRLWDSSAHKFVDTRNR*
Ga0070733_103301992	3300005541	Surface Soil	MNSNYEIFKQRSDGSFLRIESVQNIEQARTDLKKLVSGEPGDYRLWDSSAHKFVDPRNR*
Ga0070732_102552562	3300005542	Surface Soil	MKSNYEIFRQRSDGSFVRIESVKNIEQAKADLKKLVSGETGDYRLWDSSAHKFVDPRNR*
Ga0070762_102453292	3300005602	Soil	MNSNYEIFRLRSDGSFVRIESVTNIDQAKADLKKLVSGEPGDYRLWDSFAHKFVDPRNR*
Ga0070763_108892521	3300005610	Soil	MNSKYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGDYRLWDSSGHKLIEPRKH*
Ga0070766_100625442	3300005921	Soil	MNSNYEIFKLRSDGSFVRIESVKNIDQAKADLKNFVSTVPGNYRLWDSSAHKFVDPRNR*
Ga0070766_103067261	3300005921	Soil	MNSNYEIFKQRSDGSFVRIEAVKDIDQARRDLKNLVSTVPGDYRLWDSSRHKFINPSKHEKRKIE*
Ga0070766_104468542	3300005921	Soil	MKSNYEIFKQRSDGSFVRIESVQNIDQARTDLKKLVSGEPGDYRLWDSSAHKFVDPRNR*
Ga0070715_106408411	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	KSSTNLFVRGVSMNSNYEIFKLRSDGSFVRIEAVKNIDQAKVDLKKLVSGEPGDYRLWDSSAHKFVDPRNR*
Ga0070765_1004456803	3300006176	Soil	MNSNYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTVPGDYRLWDSSGHKFIEPRKH*
Ga0070765_1009813332	3300006176	Soil	MNSNYEIFRQRSDGSFVRIEGVKSIDQAKADLKKLVSGEPGDYRLWDSFAHKFVDPRNR*
Ga0070765_1018517122	3300006176	Soil	MNSKYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGNYRLWDSSGHKFIDLRNR*
Ga0099792_106798422	3300009143	Vadose Zone Soil	MTSNYEIFKLRSDGSFVRIESVKNIDQAQTDLQKLVSAVPGDYRLWDSSAHKFVDTRNR*
Ga0150983_142036551	3300011120	Forest Soil	MNSSYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGDYRLWDSSGHKFIEPRKH*
Ga0150983_155965751	3300011120	Forest Soil	MNSSYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGNYRLWDSSGHKFIDLRNR*
Ga0150983_160784643	3300011120	Forest Soil	VRCFMNSQYEIFEQRSDGSFVRIEAVKDIDQARRDLKNLVSTAPGNYRLWDSSCHKFIDPRRD*
Ga0150983_164762521	3300011120	Forest Soil	MNSNYEIFRQRSDGSFVRIEGVKGIDQAKVDLKKLVSGEPGDYRLWDSSAHKFVDPRNR*
Ga0137363_114448692	3300012202	Vadose Zone Soil	MTSNYEIFKLRSDGSFVRIESVKNIDQAQTDLKKLVSAVPGDYRLWDSSAHKFVDLRNRGWDKY*
Ga0137362_104758193	3300012205	Vadose Zone Soil	MTSNYEIFRQRSDGSFVRIEAVKNIDQAQTDLKKLVSAVPGDYRLWDSSAHKFVDPRNR*
Ga0137360_103390634	3300012361	Vadose Zone Soil	MTSNYEIFKLRSDGSFVRIESVKNIDQAQTDLQKLVSAVPGDYRLWDSSAHKFVEPRNR*
Ga0137398_100944555	3300012683	Vadose Zone Soil	MTSNYEIFKLRSDGSFVRIESVKNIDQAQTDLQKLVSAVPGDYRLWDSSAHKVVDLRNR*
Ga0137395_104777811	3300012917	Vadose Zone Soil	MTSNYEIFKLRSDGSFVRIESVKNIDQAQTDLQKLVSAVPGDYRLWDSSAHKFV
Ga0137359_103311153	3300012923	Vadose Zone Soil	MNSNYEIFKQRSDGSFVRIETVKNIDQAKADLKKLVSSVPGDYRLWDSSGHKFIAPLNR*
Ga0137359_103818352	3300012923	Vadose Zone Soil	MNSNYEIFKQRSDGSFVRIEAVKLIDQARKDLKNLVSTVPGDYRLWDSSSHKFIDPRNR*
Ga0137413_102293682	3300012924	Vadose Zone Soil	MTSNYEIFKLRSDGSFVRIESVKNIDQAQTDLKKLVSAVPGDYRLWDSSAHKFVDLRNR*
Ga0137412_105823932	3300015242	Vadose Zone Soil	MTSNYEIFKLRSDGSFVRIESVKNIDQAQTDLKKLVSAVPGDYRLWDSSAHKFVDPRNR*
Ga0210407_100323851	3300020579	Soil	MNSNYEIFKQRSDGSFVRIESVTNIEQAKTDLKKLASGEPGDYRLWDSSAHKFVDTRNR
Ga0210407_101638644	3300020579	Soil	MNSNYEIFKLRSDGSFVRIESVENIEQAKADLKNLVSTVPGNYRLWDSSAHKFVDPRNR
Ga0210403_100617275	3300020580	Soil	MNSNYEIFKQRSDGSFVRIESVKNLDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0210403_101349394	3300020580	Soil	MNSNYEIFKLRSDGSFVRIEGVTNIDQAKADLKKLVSCEPGDYRLWDSSAHKFVDTRNR
Ga0210403_104164343	3300020580	Soil	MNSSYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTVPGDYRLWDSSGHKFIEPRKH
Ga0210399_101565461	3300020581	Soil	MNSSYEIFKQRSDGSFVRIEAVNDIDQAQRDLKNLVSTLPGDYRLWDSSGHKFIEPRNR
Ga0210399_104894382	3300020581	Soil	MNSNYEIFRLRSDGSFVRIESVTNIDQAKADLKKLVSGEPGDYRLWDSFAHKFVDPRNR
Ga0210399_108778571	3300020581	Soil	MNSSYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGNYRLWDSSGHKFIDPRRD
Ga0210395_100800832	3300020582	Soil	MNSSYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGNYRLWDSSGHKFIDTRRD
Ga0210395_103088061	3300020582	Soil	MNSSYEIFKQRSDRSFVWIEAVKDIDQAQRDLKTLFSTAPGNYRLWDSSGHKFIEPRKH
Ga0210395_103596891	3300020582	Soil	MKSNYEIFRLRSDGSFVRIESVKNIEQAKTDFKKLVSAVPGDYRLWDTSAHKFVDPRNR
Ga0210401_1000334318	3300020583	Soil	MNSNYEIFKLRSDGSFVRIESVTNIDQAKADLRKLVLGEPGDYRLWDSFAHKFVDPRNR
Ga0210401_100839141	3300020583	Soil	MNSQYEIFEQRSDGSFVRIEAVKDIDQARRDLKNLVSTAPGNYRLWDSSGHKFIEPRKH
Ga0210406_101718294	3300021168	Soil	MSSNYEIFKLRSDGSFVRIESVENIEQVKADLKNLVSTVLGNYRLWDSSAHKFVDPRNR
Ga0210406_111957842	3300021168	Soil	MNSNYEIFKLRSDGSFVRIEGVTNIDQAKADLKKLVSCEPGDYRLWDSSAHKFVD
Ga0210405_1000415815	3300021171	Soil	MNSNYEIFKQRSDGSFVRIESVKNIEQAKADLKEFVSGEPGDYRLWDSSAHKFVDTRNR
Ga0210405_100354802	3300021171	Soil	MKSNYEIFRQRSDGSFVRIEAVKNIDQAKADLKKLVSGELGDYRLWDSSAHKFVDPRNR
Ga0210405_100763473	3300021171	Soil	MNSNYEIFKLRSDGSFVRIESVTNIDQAKADLKKLVSGEPGDYRLWDSFAHKFVDPRNR
Ga0210396_100571261	3300021180	Soil	MNSQYEIFEQRSDGSFVRIEAVKDIDQARRDLKNLVSTAPGNYRLWDSSGHKF
Ga0210396_107998492	3300021180	Soil	MNSNYEIFRLRSDESFVRIESVTNIDQAKADLKKLVSGEPGDYRLWDSFAHKFVDPRNR
Ga0210388_106281033	3300021181	Soil	MNSNYEIFKQRSDGSFVRIESVTNIEQAKTDLKKLASGEPGDYRLWYSSAHKF
Ga0210397_106528072	3300021403	Soil	MNSNYEIFKLRSDGSFVRIEGVKNIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0210397_110496201	3300021403	Soil	MNSQYEIFEQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGNYRLWDSSGHKFIDTR
Ga0210389_100758462	3300021404	Soil	MNSQYEIFEQRSDGSFVRIEAVKDIDQARRDLKNLVSTAPGNYRLWDSSCHKFIDPRRD
Ga0210387_103837691	3300021405	Soil	MNSSYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGNYRLWDSSCHKFIDPRRD
Ga0210394_104913352	3300021420	Soil	MNSNYEIFRLRSDGSFVRIESVKNIEQAKTDFKKLVSAVPGDYRLWDTSAHKFVDPRNR
Ga0210392_106557342	3300021475	Soil	MNSNYEIFKQRSDGSFVRIESVTNIEQAKTDLKKLASGEPGDYRLWDSCAHKFVDTRNR
Ga0210398_109591901	3300021477	Soil	MNSNYEIFRLRSDGSFVRIESVTNIDQAKADLRKLVLGEPGDYRLWDSFAHKFVDPRNR
Ga0210410_103320224	3300021479	Soil	MNSKYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGNYRLWDSSGHKFIDTRRD
Ga0210409_115149862	3300021559	Soil	MNSNYEIFRQRSDGSFVRIEGVKGIDQAKVDLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0207685_106471022	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKSNYEIFRQRSDGSFVRIEAVKNIDQAKVDLKKLVSGEPGDYRLWDSSAHKFVDLRNR
Ga0179587_105596081	3300026557	Vadose Zone Soil	MTSNYEIFRQRSDGSFVRIESVKNIEQAKTDLQKLVSAVPGDYRLWDSSAHKFVDPRNRGRDKY
Ga0209325_10035093	3300027050	Forest Soil	MKSNYEIFRQRSDGSFVWIEAVKNIDQAKADLKKLVSGEPGDYRLWDSFSHKFVDPRNR
Ga0209214_10195422	3300027071	Forest Soil	MNSNYEIFKLRSDGSFVRIEAVKNIDQAKADLKKLVSGEPGDYRLWDSSAHNFVDLRNR
Ga0208603_10267311	3300027109	Forest Soil	MKSNYEIFRQRSDGSFVRIESAKNIEQAKTDFKKLVSAVPGDYRLWDSSAHKFVDPRNR
Ga0209418_10124463	3300027371	Forest Soil	MNSNYEIFKLRSDGSFVRIEAVKNIDQAKADLKKLVSGEPGDYRLWDSFSHKFVDPRNR
Ga0209622_10404222	3300027502	Forest Soil	MNSNYEIFKLRSDGSFVRIEGVKNIDQAKVDLKKLVSGEPGDYRLWDSSAQKFVDTRNR
Ga0209523_10068851	3300027548	Forest Soil	MNSNYEIFKLRSDGSFVRIEAVKNIDQAKVDLKKLVSGEPGDYRLWDSFSHKFVDPRNR
Ga0209525_10209052	3300027575	Forest Soil	MNSNHEIFRQCSDGSFVRIEGVKSIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0209003_10210422	3300027576	Forest Soil	MNSNYEIFKQRSDGSFVRIEGVKNIDQAKVDLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0209579_100337742	3300027869	Surface Soil	MNSNYEIFRQRSDGSFVRIEGVKSIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0209579_100542032	3300027869	Surface Soil	MNSNYEIFKQRSDGSFLRIESVQNIEQARTDLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0209380_101808522	3300027889	Soil	MKSNYEIFKQRSDGSFVRIESVQNIDQARTDLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0209380_102821042	3300027889	Soil	MNSNYEIFKQRSDGSFVRIEAVKDIDQARRDLKNLVSTVPGDYRLWDSSRHKFINPSKHEKRKIE
Ga0209380_103440082	3300027889	Soil	MNLKYEIFKQRSDSSFVRIETVNDIDRARRDLENLVSTVPGDYRLWDSFGHKFINPSKH
Ga0209624_103747613	3300027895	Forest Soil	MNLSYEIFKQRSDGSFARIEAVKDIDQAQRDLKNLVSATPGNYRLWDSSGHKFIDPRRD
Ga0265357_10070981	3300028023	Rhizosphere	MNSKYEIFKQRSDGSFVRIEAVKGIDQAQRDLKNLVSTAPGDYRLWDSSGHKFIEPRKH
Ga0209526_103339931	3300028047	Forest Soil	EIFRQCSDGSFVRIEGVKSIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0308309_100676901	3300028906	Soil	MNSNYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTVPGDYRLWDSSGHKFIEPRKH
Ga0308309_104622522	3300028906	Soil	MNSKYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGNYRLWDSSGHKFIDPRRD
Ga0308309_106424582	3300028906	Soil	IPAQKHIVKSSTNLFCARYFMKSNYEIFKQRSDGSFVRIESVQNIDQARTDLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0308309_108638431	3300028906	Soil	MNSNYEIFRQRSDGSFVRIEGVKSIDQAKADLKKLVSGEPGDYRLWDSFAHKFVDPRNR
Ga0265753_10089681	3300030862	Soil	MNSKYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTAPGDYRLWDSSGHKFIEPRKH
Ga0073994_116226281	3300030991	Soil	MTSNYEIFKLRSDGSFVRIESVKNIDQAQTDLQKLVSAVPGDYRLWDSSAHKFVDLRNR
Ga0170834_1085002051	3300031057	Forest Soil	MNSNYEIFKLRSHGSFARIESVKDIEQAQTDLKKLVSAVPGDYRLWDSSVHKFVDPRNR
Ga0170834_1125604241	3300031057	Forest Soil	MNSNYEIFKLRSDGSFIRIESVKNIDQAKTDLKKLVSAVPGDYRLWDSSAHKFVDTRNR
Ga0170822_153317661	3300031122	Forest Soil	MNSNYEIFKLRSDGSFVRIESVKNIDQAQTDLKKLVSAVPGDYRLWDSSAHKFVDPRNR
Ga0170823_103819202	3300031128	Forest Soil	YFMKSNYEIFRQRSDGSFVRIESVKNIDQAKTDLKKLVSAVPGDYRLWDSSAHKFVDTRN
Ga0170824_1103576171	3300031231	Forest Soil	MNSNYEIFKQRSDGSFVRIESVKNIEQAKADLKKLVSGEPGDYRLWDSSAHQFVDPRNR
Ga0170824_1128090881	3300031231	Forest Soil	MNSNYEIFKLRSHGSFARIESVKDIEQAQTDLKKLVSAVPGDYRLWDSS
Ga0170824_1148434382	3300031231	Forest Soil	MNSNYEIFKLRSDGSFVRIESVKNIDQAQTDLKKLVSTVPGDYRLWDSSAHKFVVPRNR
Ga0170824_1148487402	3300031231	Forest Soil	MNSNYEIFKLRSDGSFVRIESVKNIEQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0170824_1276843082	3300031231	Forest Soil	LHEPLCVRCFMNSNYEIFKQRSDGPFVRIEAVKNIDQAKADLKKLVSTVPGDYRLWDSSSHKFIDLRNR
Ga0307476_110868641	3300031715	Hardwood Forest Soil	LCARCFMNSNYEIFRQRSDGSFVRIEGVKSIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0307476_113265751	3300031715	Hardwood Forest Soil	RRSDGSFVRIEAVKDIDQAQRDLKNLVSTVPGDYRLWDSSGHKFIEPRNR
Ga0307474_101340764	3300031718	Hardwood Forest Soil	MNSNYEIFKQRSDGSFVRIESVKNIEQARADLKELVSGEPGDYRLWDSSAHKFVDTRNR
Ga0307474_101477623	3300031718	Hardwood Forest Soil	MNSSYEIFRQRSDGSFVRIEAVKNIDQAKVDLKKLVSGEPGDYRLWDSSAHKFVDPRSR
Ga0307469_100925604	3300031720	Hardwood Forest Soil	MNSNYEIFKLRSDGSFVRIEAVKNIDQAKVDLKKLVSGEPGDYRLWDSSAHKFVDLRNR
Ga0307477_100754432	3300031753	Hardwood Forest Soil	MNSSYEIFRQRSDGSFVRIEAVKNIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRSR
Ga0307477_104256393	3300031753	Hardwood Forest Soil	MNSNYEIFKLRSDGSFVRIESVENIEQAKADLKNLVSTVPGNYRLWDSSAHTFVDPRNR
Ga0307477_108067832	3300031753	Hardwood Forest Soil	MNSNYEIFKLRSDGSFVRIEAVKNIDQAKVDLKKLVSGEPGDYRLWDSSAHKFVDTRN
Ga0307475_104671522	3300031754	Hardwood Forest Soil	MNSNYEIFKQRSDGSFMRIEAVKDIDQARKDLKNLVSTEPGDYRLWDSSGHKFIDPRNR
Ga0307475_105906292	3300031754	Hardwood Forest Soil	MNSNYEIFKQRSDGSFVRIEGVKSIVQAKMDLKNLVSTVPGNYRLWDSSAHKFIDPRNR
Ga0307478_116491032	3300031823	Hardwood Forest Soil	LCARCFMKSNYEIFRQRSDGSFVRIESVKNIEQAKTDFKKLVSAVPGDYCLWDSSAHKFVDPRNR
Ga0307479_100791214	3300031962	Hardwood Forest Soil	MNSNYEIFKQRSDGSFVRIESVKNIEQARADLKKLVSGEPGDYRLWDSSAHKFVDTRNR
Ga0307479_103939332	3300031962	Hardwood Forest Soil	VLHEPLCARCFMNSNYEIFRQRSDGSFVRIESAKNIEQAKTDLKKLVSAVPGDYRLWDSSAHKFIDPRNRGRNKY
Ga0307479_107778762	3300031962	Hardwood Forest Soil	MNSNYEIFKQRSDGSFVRIESVKNIEQAKTDLKKLVSAVPGDYRLWDSSAHKFVDPRNR
Ga0307470_111555172	3300032174	Hardwood Forest Soil	NLCVRGVSMNSNYEIFKLGSDGSFVRIEAVKNIYQAKVDLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0307471_1003705422	3300032180	Hardwood Forest Soil	MNSNYEIFKQRSVGSFVRIEGVKSIVQAKMDLKNLVSTVPGNYRLWDSSAHKFIDPRNR
Ga0307471_1021620622	3300032180	Hardwood Forest Soil	MNSNYEIYKQRSDGSLVRIEAVKNIDQAKVDLKKLVSGEPGDYRLWDSSAHKFVDPRNP
Ga0307471_1033652501	3300032180	Hardwood Forest Soil	MNSNYEIFRQRSDGSFVRIEGVKNIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0307472_1004559671	3300032205	Hardwood Forest Soil	FKSSTSLFCARCFMNSNYEIFRQRSDGSFVRIEGVKSIDQAKADLKKLVSGEPGDYRLWDSSAHKFVDPRNR
Ga0335085_118976011	3300032770	Soil	MNATYEIFKQRSDGSFVRIEAVKDIDQAQRDLKNLVSTVPGDYRLWDSFGHKFIEPRKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076537

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences