Metagenome / Metatranscriptome Family F076535

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076535
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	76 residues
Representative Sequence	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDNFSAQKQRQ
Number of Associated Samples	93
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.46 %
% of genes near scaffold ends (potentially truncated)	26.27 %
% of genes from short scaffolds (< 2000 bps)	83.05 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.458 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.271 % of family members)
Environment Ontology (ENVO)	Unclassified (42.373 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.542 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.40% β-sheet: 0.00% Coil/Unstructured: 56.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00270	DEAD	14.41
PF13585	CHU_C	10.17
PF13414	TPR_11	5.08
PF00271	Helicase_C	2.54
PF04675	DNA_ligase_A_N	1.69
PF01381	HTH_3	0.85
PF08280	HTH_Mga	0.85
PF04679	DNA_ligase_A_C	0.85
PF00515	TPR_1	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.54

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.31 %
Unclassified	root	N/A	1.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.31 %
Unclassified	root	N/A	1.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.46 %
Unclassified	root	N/A	1.69 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.85 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	89.83 %
Unclassified	root	N/A	1.69 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	77.97 %
Unclassified	root	N/A	1.69 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	77.97 %
Unclassified	root	N/A	1.69 %
Fungi incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	55.93 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	5.93 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.54 %
Unclassified	root	N/A	1.69 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.85 %
Microsporidia	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Microsporidia	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	55.93 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	5.93 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.54 %
Unclassified	root	N/A	1.69 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.85 %
Apansporoblastina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Microsporidia → Apansporoblastina	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	55.93 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	5.93 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2.54 %
Unclassified	root	N/A	1.69 %
Enterocytozoonidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Microsporidia → Apansporoblastina → Enterocytozoonidae	0.85 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	55.93 %
Flavihumibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter	2.54 %
Mangrovimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Mangrovimonas	1.69 %
Unclassified	root	N/A	1.69 %
Niastella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella	0.85 %
Enterocytozoon	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Microsporidia → Apansporoblastina → Enterocytozoonidae → Enterocytozoon	0.85 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	55.93 %
Flavihumibacter petaseus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter → Flavihumibacter petaseus	2.54 %
Mangrovimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Mangrovimonas	1.69 %
Unclassified	root	N/A	1.69 %
Enterocytozoon bieneusi	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Microsporidia → Apansporoblastina → Enterocytozoonidae → Enterocytozoon → Enterocytozoon bieneusi	0.85 %
Niastella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella	0.85 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	55.93 %
Flavihumibacter petaseus NBRC 106054	strain	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter → Flavihumibacter petaseus → Flavihumibacter petaseus NBRC 106054	2.54 %
Mangrovimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Mangrovimonas	1.69 %
Unclassified	root	N/A	1.69 %
Enterocytozoon bieneusi	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Microsporidia → Apansporoblastina → Enterocytozoonidae → Enterocytozoon → Enterocytozoon bieneusi	0.85 %
Niastella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella	0.85 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100996550	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	701	Open in IMG/M
3300000956\|JGI10216J12902_101620454	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Microsporidia → Apansporoblastina → Enterocytozoonidae → Enterocytozoon → Enterocytozoon bieneusi	787	Open in IMG/M
3300004114\|Ga0062593_100803771	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	936	Open in IMG/M
3300004114\|Ga0062593_102234712	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	614	Open in IMG/M
3300004479\|Ga0062595_101119047	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	690	Open in IMG/M
3300005289\|Ga0065704_10880544	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	500	Open in IMG/M
3300005290\|Ga0065712_10070495	All Organisms → cellular organisms → Bacteria	5959	Open in IMG/M
3300005290\|Ga0065712_10164476	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1281	Open in IMG/M
3300005294\|Ga0065705_10988636	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	550	Open in IMG/M
3300005340\|Ga0070689_100018806	All Organisms → cellular organisms → Bacteria	5099	Open in IMG/M
3300005353\|Ga0070669_100209433	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Mangrovimonas	1537	Open in IMG/M
3300005354\|Ga0070675_102222923	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	505	Open in IMG/M
3300005364\|Ga0070673_100151702	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1963	Open in IMG/M
3300005364\|Ga0070673_100320572	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300005365\|Ga0070688_101413283	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	564	Open in IMG/M
3300005367\|Ga0070667_100071930	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2946	Open in IMG/M
3300005367\|Ga0070667_101178430	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	717	Open in IMG/M
3300005456\|Ga0070678_100721127	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	900	Open in IMG/M
3300005459\|Ga0068867_100506176	All Organisms → cellular organisms → Bacteria → FCB group	1039	Open in IMG/M
3300005539\|Ga0068853_102280331	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	525	Open in IMG/M
3300005543\|Ga0070672_102109956	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	508	Open in IMG/M
3300005544\|Ga0070686_100123789	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1779	Open in IMG/M
3300005617\|Ga0068859_100431659	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1414	Open in IMG/M
3300005617\|Ga0068859_101230329	All Organisms → cellular organisms → Bacteria → FCB group	825	Open in IMG/M
3300005618\|Ga0068864_100378381	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1341	Open in IMG/M
3300005618\|Ga0068864_100896420	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	876	Open in IMG/M
3300005841\|Ga0068863_100041705	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4364	Open in IMG/M
3300005843\|Ga0068860_100846954	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	929	Open in IMG/M
3300006046\|Ga0066652_100018888	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	4686	Open in IMG/M
3300006163\|Ga0070715_10664702	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	618	Open in IMG/M
3300006237\|Ga0097621_100108246	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella	2346	Open in IMG/M
3300006237\|Ga0097621_100990512	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	786	Open in IMG/M
3300006237\|Ga0097621_101861533	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	574	Open in IMG/M
3300006358\|Ga0068871_100360887	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1287	Open in IMG/M
3300006358\|Ga0068871_100894683	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter → Flavihumibacter petaseus → Flavihumibacter petaseus NBRC 106054	823	Open in IMG/M
3300006791\|Ga0066653_10301420	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	808	Open in IMG/M
3300009011\|Ga0105251_10503320	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	566	Open in IMG/M
3300009094\|Ga0111539_13203808	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	527	Open in IMG/M
3300009174\|Ga0105241_11166303	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300009176\|Ga0105242_12642554	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	551	Open in IMG/M
3300009551\|Ga0105238_12405789	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	562	Open in IMG/M
3300009553\|Ga0105249_11705873	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	702	Open in IMG/M
3300010147\|Ga0126319_1128126	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	751	Open in IMG/M
3300011332\|Ga0126317_10914952	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	587	Open in IMG/M
3300012212\|Ga0150985_118168838	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	581	Open in IMG/M
3300012469\|Ga0150984_114931612	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	876	Open in IMG/M
3300012883\|Ga0157281_1062674	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	599	Open in IMG/M
3300012883\|Ga0157281_1072407	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	575	Open in IMG/M
3300012891\|Ga0157305_10279892	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	514	Open in IMG/M
3300012892\|Ga0157294_10200751	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	587	Open in IMG/M
3300012893\|Ga0157284_10165408	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	640	Open in IMG/M
3300012895\|Ga0157309_10032005	All Organisms → cellular organisms → Bacteria → FCB group	1221	Open in IMG/M
3300012900\|Ga0157292_10201161	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter → Flavihumibacter petaseus → Flavihumibacter petaseus NBRC 106054	666	Open in IMG/M
3300012900\|Ga0157292_10208639	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	657	Open in IMG/M
3300012903\|Ga0157289_10040578	All Organisms → cellular organisms → Bacteria → FCB group	1137	Open in IMG/M
3300012905\|Ga0157296_10221502	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	617	Open in IMG/M
3300012906\|Ga0157295_10070044	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	890	Open in IMG/M
3300012909\|Ga0157290_10077461	All Organisms → cellular organisms → Bacteria → FCB group	930	Open in IMG/M
3300012909\|Ga0157290_10098002	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300012913\|Ga0157298_10005984	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1832	Open in IMG/M
3300012985\|Ga0164308_11074972	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	719	Open in IMG/M
3300013102\|Ga0157371_10750616	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	733	Open in IMG/M
3300013306\|Ga0163162_12864670	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	555	Open in IMG/M
3300013308\|Ga0157375_13514795	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	521	Open in IMG/M
3300014325\|Ga0163163_10140005	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2462	Open in IMG/M
3300014326\|Ga0157380_10145169	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2044	Open in IMG/M
3300014326\|Ga0157380_11129008	All Organisms → cellular organisms → Bacteria → FCB group	824	Open in IMG/M
3300014969\|Ga0157376_10018050	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5397	Open in IMG/M
3300015200\|Ga0173480_10503591	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	725	Open in IMG/M
3300015201\|Ga0173478_10236667	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	790	Open in IMG/M
3300015371\|Ga0132258_10688569	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300018067\|Ga0184611_1073960	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300018072\|Ga0184635_10274252	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	666	Open in IMG/M
3300018073\|Ga0184624_10058957	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300018081\|Ga0184625_10001467	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	9850	Open in IMG/M
3300018476\|Ga0190274_13206253	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	550	Open in IMG/M
3300018481\|Ga0190271_10011784	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6274	Open in IMG/M
3300019356\|Ga0173481_10691279	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	550	Open in IMG/M
3300019361\|Ga0173482_10033772	All Organisms → cellular organisms → Bacteria → FCB group	1566	Open in IMG/M
3300019361\|Ga0173482_10198306	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	820	Open in IMG/M
3300019361\|Ga0173482_10522123	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	581	Open in IMG/M
3300019362\|Ga0173479_10071414	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1206	Open in IMG/M
3300019362\|Ga0173479_10428514	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	647	Open in IMG/M
3300019362\|Ga0173479_10655934	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	558	Open in IMG/M
3300020000\|Ga0193692_1008113	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2632	Open in IMG/M
3300020020\|Ga0193738_1013975	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2584	Open in IMG/M
3300020020\|Ga0193738_1132320	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	686	Open in IMG/M
3300022737\|Ga0247747_1013152	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter → Flavihumibacter petaseus → Flavihumibacter petaseus NBRC 106054	857	Open in IMG/M
3300022880\|Ga0247792_1024061	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1032	Open in IMG/M
3300022899\|Ga0247795_1030464	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	881	Open in IMG/M
3300023062\|Ga0247791_1013426	All Organisms → cellular organisms → Bacteria → FCB group	1213	Open in IMG/M
3300023078\|Ga0247756_1026395	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	918	Open in IMG/M
3300024055\|Ga0247794_10035602	All Organisms → cellular organisms → Bacteria → FCB group	1310	Open in IMG/M
3300025580\|Ga0210138_1151748	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	569	Open in IMG/M
3300025918\|Ga0207662_10203177	All Organisms → cellular organisms → Bacteria → FCB group	1283	Open in IMG/M
3300025923\|Ga0207681_10224737	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Mangrovimonas	1454	Open in IMG/M
3300025923\|Ga0207681_10855513	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	761	Open in IMG/M
3300025930\|Ga0207701_10008788	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	9970	Open in IMG/M
3300025930\|Ga0207701_10591929	All Organisms → cellular organisms → Bacteria → FCB group	945	Open in IMG/M
3300025934\|Ga0207686_10005049	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7099	Open in IMG/M
3300025934\|Ga0207686_10044199	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2734	Open in IMG/M
3300025960\|Ga0207651_10592277	All Organisms → cellular organisms → Bacteria → FCB group	968	Open in IMG/M
3300026023\|Ga0207677_10750361	All Organisms → cellular organisms → Bacteria → FCB group	870	Open in IMG/M
3300026075\|Ga0207708_10044648	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3377	Open in IMG/M
3300026095\|Ga0207676_10052808	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3179	Open in IMG/M
3300026095\|Ga0207676_10689356	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	989	Open in IMG/M
3300026095\|Ga0207676_12216157	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	547	Open in IMG/M
3300026118\|Ga0207675_100379911	All Organisms → cellular organisms → Bacteria → FCB group	1389	Open in IMG/M
3300028381\|Ga0268264_11004643	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	841	Open in IMG/M
3300031538\|Ga0310888_10492693	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	732	Open in IMG/M
3300031547\|Ga0310887_10467362	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	755	Open in IMG/M
3300031854\|Ga0310904_10763045	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	674	Open in IMG/M
3300032013\|Ga0310906_11451359	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	504	Open in IMG/M
3300032075\|Ga0310890_10626937	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300032157\|Ga0315912_10126331	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2004	Open in IMG/M
3300032179\|Ga0310889_10310844	Not Available	763	Open in IMG/M
3300032179\|Ga0310889_10375513	Not Available	701	Open in IMG/M
3300033412\|Ga0310810_10434518	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1338	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.78%
Host-Associated	Host-Associated	43.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.85%
Plants	Host-Associated → Plants	43.22%
Aquatic	Environmental → Aquatic	5.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.80%
Roots	Host-Associated → Plants → Roots	5.08%
Sediment	Environmental → Aquatic → Sediment	3.39%
Freshwater	Environmental → Aquatic → Freshwater	1.69%
Marine	Environmental → Aquatic → Marine	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.32%
Loam	Environmental → Terrestrial → Soil → Loam	5.08%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	5.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.39%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.08%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	5.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.39%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	4.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.39%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.54%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023078	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L066-202C-4	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1009965502	3300000956	Soil	MYLHRKLENPELMDLLVIHTNRFTQIMIHGETYCGEYEVCKRTIELIQNEIFSRQHYYLKPSFSNRKFDNSSVQHQTK*
JGI10216J12902_1016204541	3300000956	Soil	MYLHRKLENPELIDLLVIHTNRLTQIMIYGERYVGEYEICKRTIELVQNEIVSRQPYYLNPSVSSGGFNNSSVQH*
Ga0062593_1008037712	3300004114	Soil	MYLHRKLEKPELMDLLVIHTNRFTQILIHGETYTGEYNVCKRTIELVQAEILSRQPYYRGSSLRSGQRGNSPVQH*
Ga0062593_1022347121	3300004114	Soil	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRSNNHSSRQQR*
Ga0062595_1011190472	3300004479	Soil	MYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRHPYLIKPAFINGKFNNYSSHKQRQ*
Ga0065704_108805441	3300005289	Switchgrass Rhizosphere	HRKLEKPELMDLLVIHTNRFTQILIHGETYTGEYNVCKRTIELVQAEILSRQPYYRGSSLRSGQRGNSPVQH*
Ga0065712_100704952	3300005290	Miscanthus Rhizosphere	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDNFSAQKQRQ*
Ga0065712_101644762	3300005290	Miscanthus Rhizosphere	MYQHRKLENQELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRHPDLIKPAFINGKFNNYSSHKQRQ*
Ga0065705_109886361	3300005294	Switchgrass Rhizosphere	PSMYLHRKLESPELVDLLVIHTNRFIRIMIHGETYVGEYDVCKRTIELIQAEIFSRQSFYIKPSFSNRKFANSPVQH*
Ga0070689_1000188063	3300005340	Switchgrass Rhizosphere	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDIFSAQKQRQ*
Ga0070669_1002094332	3300005353	Switchgrass Rhizosphere	MVFVFREENMYLHRKLEYPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDIFSAQKQRQ*
Ga0070675_1022229232	3300005354	Miscanthus Rhizosphere	MYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRKHYLMKPAFISGKFDNFLSHKQKQ*
Ga0070673_1001517021	3300005364	Switchgrass Rhizosphere	MVFVIFFCEEILQMYLHRKLRSPELIDLLVIHTKRFTRIIMHGETYVGEYEVCKRTIELIQAEIFSRQPYYL
Ga0070673_1003205722	3300005364	Switchgrass Rhizosphere	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRSNNHSSHRQR*
Ga0070688_1014132831	3300005365	Switchgrass Rhizosphere	MYLHRKLENPELIDLLVIHTNRFTQILIHGETYGGEYNVCKRTIELIQDEIFSRQPYYLKSLFSSAKFDNSPVQL*
Ga0070667_1000719302	3300005367	Switchgrass Rhizosphere	MVFVFFLGGDLNMYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDNFSAQKQRQ*
Ga0070667_1011784301	3300005367	Switchgrass Rhizosphere	MYLHRKLENLELMDLLVIHTNRFIQIMIHGETYVGEYKVCKRTIELIQAEIFSRQSYFLTPSFNNSVRFDNSSVQR*
Ga0070678_1007211271	3300005456	Miscanthus Rhizosphere	MYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRSNNHSSRQQR*
Ga0068867_1005061761	3300005459	Miscanthus Rhizosphere	MYLHRKLENLELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELIQNEIISRPPYLIKPAFINGKFNNFSAIK*
Ga0068853_1022803312	3300005539	Corn Rhizosphere	MYLHRKLENPELIDLLVIHTNRLIQIMIYGETYFGEYEICKRTIELVQSEILSRQPYLIRPDFINGKLNNFSAQKQIQ*
Ga0070672_1021099562	3300005543	Miscanthus Rhizosphere	MYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYMGEYKICKRTIELIQSEILSRQPYLIRPAFISGKFDTSSAHQHYH
Ga0070686_1001237892	3300005544	Switchgrass Rhizosphere	MVFVFFLGGDLNMYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDIFSAQKQRQ*
Ga0068859_1004316591	3300005617	Switchgrass Rhizosphere	MYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRHPDLIKPAFINGKFNNYSSHKQKQ*
Ga0068859_1012303291	3300005617	Switchgrass Rhizosphere	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDIF
Ga0068864_1003783813	3300005618	Switchgrass Rhizosphere	MYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRHPDLIKPAFINGKFNNYSSHKQRQ*
Ga0068864_1008964201	3300005618	Switchgrass Rhizosphere	MYLHRKLENPELIDLLVVHTNRFTRILIHGETYVGEYEVCKRTIELIQDEIFSRQPYYRKPSFSTWSLYNSSIHRQMK*
Ga0068863_1000417053	3300005841	Switchgrass Rhizosphere	MYLHRKLENRELIDLLVIHTNRLTQIMIYGETYFGEYEICKRTIELVQSEILYRQPYLIRPAFINGKLDNFSAQKQIQ*
Ga0068860_1008469543	3300005843	Switchgrass Rhizosphere	MYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRHPYLIKPAFINGKFNNYSSHKQKQ*
Ga0066652_1000188883	3300006046	Soil	MYLPRKLNDPELIDLLVIHTNRLTQIMIHGETYMGEYEVCKRTIELLQNEIISRKPYLMKPAFSTGKFDTPSAYQQ*
Ga0070715_106647022	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MYLHRKLENRELIDLLVIHTNRLTQIMIYGETYFGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLNNFSAQKQIQ*
Ga0097621_1001082464	3300006237	Miscanthus Rhizosphere	MYLHRKLENRELIDLLVIHTNRLTQIMIYGETYFGEYEICKRTIELVQSEILSRQPYLIRPDFINGKLNNFSAQKQIQ*
Ga0097621_1009905122	3300006237	Miscanthus Rhizosphere	MYLHRKLRNPELIDLLAIHTNRFTQIMIHGETYVGEYEVCKRTVELIQNEIYCRQPYYLSFSFNNREFDNSSVQH*
Ga0097621_1018615332	3300006237	Miscanthus Rhizosphere	MYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYMGEYKICKRTIELIQSEILSRQPYLIRPAFISGKFDTSSAHHITTNKKVPL
Ga0068871_1003608873	3300006358	Miscanthus Rhizosphere	NPELIDLLVIHTNRLTQIMIYGETYMGEYKICKRTIELIQSEILSRQPYLIRPAFISGKFDTSSAHQHYHK*
Ga0068871_1008946832	3300006358	Miscanthus Rhizosphere	MYLHRKLENRELIDLLVIHTNRLTQIMIYGETYFGEYEICKRTIELVQSEILYRQPYLIRPAFINGKLDNFSAQKQRQ*
Ga0066653_103014202	3300006791	Soil	MYLPRKLNDPELIDLLVIHTNRLTQIMIHGETYMGEYEVCKRTIELLQNEIISRKPYLMKPAFSTGNFDTPSAYQQ*
Ga0105251_105033201	3300009011	Switchgrass Rhizosphere	MDLLVIHTNRFTQIMIHGETYTGEYEVCKRTIELVQAEILSRQPYYRGSLISGQPGNSPVQH*
Ga0111539_132038081	3300009094	Populus Rhizosphere	MYLHRKLEYPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQNEIISRQHYLMKPAFISGKFDNFLSHKQKQ*
Ga0105241_111663032	3300009174	Corn Rhizosphere	MVFVFFLGGDLNMYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDAP*
Ga0105242_126425541	3300009176	Miscanthus Rhizosphere	HRKLENLELMDLLVIHTNRFTQIMIHGETYVGEYDVCKRTIELIQAEIFSRQPYYLKPSFNNMKFDNSSVQH*
Ga0105238_124057891	3300009551	Corn Rhizosphere	MVFVIFFCEEILQMYLHRKLRSPELIDLLVIHTKRFTRIIMHGETYIGEYEVCKRTIELIQAEILSRQSYCLRTSLSNRKFYNSPVKH*
Ga0105249_117058731	3300009553	Switchgrass Rhizosphere	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQNEIISRHPYLIKPAFITGKFDRSAP*
Ga0126319_11281261	3300010147	Soil	NMYLHRKLRNPELIDLLAIHTNRFTQIMIHGETYVGEYEVCKRTVELIQNEIYCRQPYYLSFSFNNREFDNSFVQH*
Ga0126317_109149522	3300011332	Soil	KLENRELIDLLVIHTNRLTQIMIYGETYVGEYNICKRTIELVQQEIISRQPYLLKPAFINGRTENYSSQQR*
Ga0150985_1181688381	3300012212	Avena Fatua Rhizosphere	LVIHTNRLTQIMIYGETYSGEYEICKRTIELVQSEIISRQSYLMKPAFINGKFDTSSTYHQRQ*
Ga0150984_1149316122	3300012469	Avena Fatua Rhizosphere	PELIDLLVIHTNRLTQIMIHGETYMGEYEVCKRTIELLQNEIISRKPYLMKPAFSTGKFDTPSAYQQ*
Ga0157281_10626741	3300012883	Soil	MDLLVIHTNRFTQILIHGETYTGEYNVCKRTIELVQAEILSRQPYYRGSSLRSGQRGNSPVQH*
Ga0157281_10724071	3300012883	Soil	LLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRSNNHSSRQQR*
Ga0157305_102798921	3300012891	Soil	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPAFINGRSNNHSSHRQR*
Ga0157294_102007511	3300012892	Soil	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRSNNHSSHRQH*
Ga0157284_101654081	3300012893	Soil	MYLHRKLEYPELIDLLVIHTNRLTQIMVYGETYVGEYEICKRTIELVQNEIISRQPYLMKPAFISGKFDIFLSHKQKQ*
Ga0157309_100320052	3300012895	Soil	MYLHRKLEYPELIDLLVIHTNRLTQIMVYGETYVGEYEICKRTIELVQNEIISRLPYLIKPAFINGKFDRSAP*
Ga0157292_102011611	3300012900	Soil	MYLHRKLEKPELMDLLVIHTNRFTQIMIHGETYTGEYNVCKQTIELIQAEILSRQPYYHGPSLINGQRGNSPVQH
Ga0157292_102086391	3300012900	Soil	MDLLVIHTNRFIQIMIHGETYAGEYDVCKRTIELIQCEIFSRQPYYLKSSFNSREFNSSV
Ga0157289_100405782	3300012903	Soil	MYLHRKLEYPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQNEIISRHPYLIKPAFINGKFDRSAL*
Ga0157296_102215021	3300012905	Soil	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPAFINGRSNNHSSR*
Ga0157295_100700441	3300012906	Soil	MYLHRKLENPELIDLLVIHTNRFTRIMIHGETYVGEYNVCKRTIELIQAEIFSRQPYYLKPSFNNNKFVNSPVQH*
Ga0157290_100774612	3300012909	Soil	MYLHRKLEYPELIDLLVIHTNRLTQIMVYGETYVGEYEICKRTIELVQSEIISRKHYLMKPVFISGKFDNFSAYKQKQ*
Ga0157290_100980021	3300012909	Soil	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRSNN
Ga0157298_100059841	3300012913	Soil	DLMQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPAFINGRSNNHSSHRQR*
Ga0164308_110749721	3300012985	Soil	MYLHRKLENPELIDLLVIHTNRLTRMMINGETYVGEYEICKRTIELIQNEIISRQPYLIKPIFINGRFDNFSAHKQRQ*
Ga0157371_107506161	3300013102	Corn Rhizosphere	ELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDNFSAQKQRQ*
Ga0163162_128646701	3300013306	Switchgrass Rhizosphere	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRHPYLIKPAFINGKFNNYSSHKHRQ*
Ga0157375_135147951	3300013308	Miscanthus Rhizosphere	MVFVIFFCEEILQMYLHRKLRSPELIDLLVIHTKRFTRIIMHGETYVGEYEVCKRTIELIQAEILSRQSYCLRPSFSNGNSIIHPLNIK*
Ga0163163_101400052	3300014325	Switchgrass Rhizosphere	MYLHRKLEYPELIDLLVIHTNRLTQIMVYGETYVGEYEICKRTIELVQSEIISRKHYLMKPAFISGKFDNFLSHKQKQ*
Ga0157380_101451693	3300014326	Switchgrass Rhizosphere	MDLLVIHTNRFTQIMIHGETYDGEYGICKRTIELIQAEILARQPYYLKTFFNSMKFDNSPVQH*
Ga0157380_111290081	3300014326	Switchgrass Rhizosphere	MDLLVIHTNRFTQIMIHGETYVGEYDVCKRTIELIQAEIFSRQPYYLKPSFNNMKFDNSSVQH*
Ga0157376_100180503	3300014969	Miscanthus Rhizosphere	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYFGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLNNFSAQKQIQ*
Ga0173480_105035911	3300015200	Soil	MDLLVIHTNRFTRILIHGETYTGEYNVCKQTIELIQAEILSRQPYYHGPSLINGQRGNSPVQH*
Ga0173478_102366672	3300015201	Soil	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYDICKRTIELVQQEIISRQPYLLKPVFINGRSNNHSSHRQR*
Ga0132258_106885694	3300015371	Arabidopsis Rhizosphere	MYLHRKLENPELIDLLVIHTNRLTQIMIHGETYVGEYKVCKRTIELIQAEIFSRQSYFLKPLYNNSVRFYNSSVEH*
Ga0184611_10739602	3300018067	Groundwater Sediment	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRSNNHSSRQQR
Ga0184635_102742522	3300018072	Groundwater Sediment	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRSNNHSSHRQHE
Ga0184624_100589572	3300018073	Groundwater Sediment	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPAFINGRSNNHSSHRQR
Ga0184625_100014672	3300018081	Groundwater Sediment	MYLHRKLENPELMDLLVIHTNRFIQIMIHGETYGGEYDVCKRTIELIQAEIFSRQPYYLKPSLRRFDNSLVQHQMNR
Ga0190274_132062532	3300018476	Soil	MYLHRKLENPELIDLLVIHTNRFTQILIHGETYGGEYNVCKRTIELIQDEIFARQPYYLKSLFSSAKFDNSPVQL
Ga0190271_100117843	3300018481	Soil	MVFVFFMEIFINMYLHRKLENPELIDLLVIHTNRLTQMMTYGETYIGEYEICKRTIELVQNEITSRQSSLIRPVPINGKSDNFSAHKLRR
Ga0173481_106912791	3300019356	Soil	MYLHRKLEKPELMDLLVIHTNRFTQILIHGETYTGEYNVCKRTIELVQAEILSRQPYYRGSSLRSGQRGNSPVQH
Ga0173482_100337722	3300019361	Soil	MYLHRKLEYPELIDLLVIHTNRLTQIMVYGETYVGEYEICKRTIELVQNEIIFRQPYLMKPAFISGKFDIFLSHKQKQ
Ga0173482_101983061	3300019361	Soil	TLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRNNNHSSHRQR
Ga0173482_105221231	3300019361	Soil	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDNFSAQKQRQ
Ga0173479_100714142	3300019362	Soil	LHGVCFCEYIIMYLHRKLEYPELIDLLVIHTNRLTQIMVYGETYVGEYEICKRTIELVQNEIIFRQPYLMKPAFISGKFDIFLSHKQKQ
Ga0173479_104285142	3300019362	Soil	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRSNNHSSRQQH
Ga0173479_106559342	3300019362	Soil	IDLLVIHTNRLTQIMIYGETYMGEYKICKRTIELIQSEILSRQPYLIRPAFISGKFDTSSAHQHYHK
Ga0193692_10081133	3300020000	Soil	MYLHRKLENLELMDLLVIHTNRFIQIMIHGETYVGEYKVCKRTIELIQAEIFSRQSYFLTPSFNNSMRFDNSSVQR
Ga0193738_10139752	3300020020	Soil	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYFGEYEICKRTIELIQNEIISRRSYLIKPAFINGQFDNFLANKQRQ
Ga0193738_11323201	3300020020	Soil	TNRFIQIMIHGETYGGEYDVCKRTIELIQDEIFSRRSYYLKSSFNTREFNSSVQH
Ga0247747_10131522	3300022737	Soil	MDLLVIHTNRFTQILIHGETYTGEYNVCKRTIELVQAEILSRQPYYRGSSLRSGQRGNSPVQH
Ga0247792_10240612	3300022880	Soil	LLHGVCFCEYIIMYLHRKLEYPELIDLLVIHTNRLTQIMVYGETYVGEYEICKRTIELVQNEIIFRQPYLMKPAFISGKFDIFLSHKQKQ
Ga0247795_10304641	3300022899	Soil	MYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRHPYLIKPAFINGKFNNYSSHKQRQ
Ga0247791_10134262	3300023062	Soil	MYLHRKLEYPELIDLLVIHTNRLTQIMVYGETYVGEYEICKRTIELVQSEIISRKHYLMKPVFISGKFDNFSAYKQKQ
Ga0247756_10263951	3300023078	Plant Litter	MYLHRKLEYPELIDLLVIHTNRLTQIMVYGETYVGEYEICKRTIELVQSEIISRKHYLMKPAFISGKFDNFLSHKQKQ
Ga0247794_100356021	3300024055	Soil	MVFVFFLGGDLNMYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDNFSAQKQRQ
Ga0210138_11517481	3300025580	Natural And Restored Wetlands	MYLHRKLENPELIDLLVIHTNRLTQIMIYGERYVGEYEICKRTIELVQNEIVSRQPYYLNPLVSSGGFNNSSVQH
Ga0207662_102031771	3300025918	Switchgrass Rhizosphere	MVFVFFLGGDLNMYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDNFSAQKRRQ
Ga0207681_102247371	3300025923	Switchgrass Rhizosphere	FFLGGDLNMYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDIFSAQKQRQ
Ga0207681_108555131	3300025923	Switchgrass Rhizosphere	VDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQQEIISRQPYLLKPVFINGRSNNHSSRQQR
Ga0207701_100087885	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MVFVFFLGGDLNMYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDIFSAQKQRQ
Ga0207701_105919291	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MYLHRKLEYPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQNEIISRHPYLIKPAFITGKFDRSAP
Ga0207686_100050495	3300025934	Miscanthus Rhizosphere	MYLHRKLENRELIDLLVIHTNRLTQIMIYGETYFGEYEICKRTIELVQSEILSRQPYLIRPDFINGKTNNFSAQKQIQ
Ga0207686_100441993	3300025934	Miscanthus Rhizosphere	MVFVIFFVRRFYKMYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRHPYLIKPAFINGKFNNYSSHKQKQ
Ga0207651_105922771	3300025960	Switchgrass Rhizosphere	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFIN
Ga0207677_107503611	3300026023	Miscanthus Rhizosphere	MVFVFFLGGDLNMYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPDFINGKLNNFSAQKQIQ
Ga0207708_100446481	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQNEIISRHPYLIKPAFITGKFDRSAP
Ga0207676_100528083	3300026095	Switchgrass Rhizosphere	MYLHRKLENRELIDLLVIHTNRLTQIMIYGETYFGEYEICKRTIELVQSEILSRQPYLIRPDFINGKLNNFSAQKQIQ
Ga0207676_106893562	3300026095	Switchgrass Rhizosphere	MYLHRKLDNPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRHPDLIKPAFINGKFNNYSSHKQRQ
Ga0207676_122161571	3300026095	Switchgrass Rhizosphere	CNFFCEKILSMYLHRKLEKPELMDLLVIHTNRFTQIMIHGETYTGEYEVCKRTIELVQAEILSRQPYYRGSLISGQPGNSPVQH
Ga0207675_1003799112	3300026118	Switchgrass Rhizosphere	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEILSRQPYLIRPAFINGKLDIFSAQKQRQ
Ga0268264_110046431	3300028381	Switchgrass Rhizosphere	MVFVIFFCEEILQMYLHRKLRSPELIDLLVIHTKRFTRIIMHGETYVGEYEVCKRTIELIQAEILSRQSYCLRPSFSNRKFDNSPVKH
Ga0310888_104926931	3300031538	Soil	THMYLHRKLETEELIDLLAMHTNRITQLMIHGETYFGEYEVCKRTIELIQNEIFSRQPYYLRPSFSGGNINNSSDHR
Ga0310887_104673621	3300031547	Soil	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYISEYEICKRTIELIQAEILSRQPYYLKSSFINGFYNSHVKH
Ga0310904_107630452	3300031854	Soil	MQLHQTLENRELVDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRKHYLMKPVFISGKFDNFSAYKQKQ
Ga0310906_114513591	3300032013	Soil	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRPPYLMKPIFFNGKFDNFSAQKQRK
Ga0310890_106269372	3300032075	Soil	VFVKIIFEVTHMYLHRKLETEELIDLLAMHTNRITQLMIYGETYFGEYEVCKRTIELIQNEIFSRQPYYLRPSFSGGNINNSSDHR
Ga0315912_101263311	3300032157	Soil	SPELVDLLVIHTNRFIQIMIYGETYGGEYNVCKRTIELIQDAIFSRQPYNLKPSFSSGKFDNSSFQH
Ga0310889_103108442	3300032179	Soil	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRPPYLMKPVFINGKFDN
Ga0310889_103755131	3300032179	Soil	MYLHRKLENRELIDLLVIHTNRLTQIMIYGEAYIGEYEICKRTIELIQGEILSREPYYLKPSFSTVRFDN
Ga0310810_104345182	3300033412	Soil	MYLHRKLENPELIDLLVIHTNRLTQIMIYGETYVGEYEICKRTIELVQSEIISRHPYLIKPAFINGKFNNYSSHKQRQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076535

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences