Metagenome / Metatranscriptome Family F076525

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076525
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	60 residues
Representative Sequence	VMMGHAIGALERLDTLETKLSKFATEMGPAALAAFGYNNKADFVEKKLYVLRSYP
Number of Associated Samples	101
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.61 %
% of genes near scaffold ends (potentially truncated)	68.64 %
% of genes from short scaffolds (< 2000 bps)	86.44 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.763 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (22.034 % of family members)
Environment Ontology (ENVO)	Unclassified (33.051 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.610 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.63% β-sheet: 0.00% Coil/Unstructured: 43.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF02371	Transposase_20	7.63
PF00467	KOW	6.78
PF13302	Acetyltransf_3	3.39
PF14534	DUF4440	2.54
PF01548	DEDD_Tnp_IS110	2.54
PF14026	DUF4242	1.69
PF01180	DHO_dh	1.69
PF00030	Crystall	1.69
PF13091	PLDc_2	1.69
PF13924	Lipocalin_5	0.85
PF14015	DUF4231	0.85
PF01872	RibD_C	0.85
PF02517	Rce1-like	0.85
PF14499	DUF4437	0.85
PF00406	ADK	0.85
PF13884	Peptidase_S74	0.85
PF13673	Acetyltransf_10	0.85
PF03372	Exo_endo_phos	0.85
PF00589	Phage_integrase	0.85
PF01471	PG_binding_1	0.85
PF00211	Guanylate_cyc	0.85
PF00873	ACR_tran	0.85
PF13561	adh_short_C2	0.85
PF00501	AMP-binding	0.85
PF03320	FBPase_glpX	0.85
PF01434	Peptidase_M41	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	10.17
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	1.69
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.69
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	1.69
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.69
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	1.69
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.85
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.85
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	0.85
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.85
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.85
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.76 %
Unclassified	root	N/A	3.39 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	36.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.39 %
Unclassified	root	N/A	3.39 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.69 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	36.44 %
Unclassified	root	N/A	3.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.54 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.69 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	27.97 %
Unclassified	root	N/A	3.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.54 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.69 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.69 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.85 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.97 %
Unclassified	root	N/A	3.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.54 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.69 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	1.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.85 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.97 %
Unclassified	root	N/A	3.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.54 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.69 %
Bacteroidetes bacterium QS_1_65_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium QS_1_65_9	1.69 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.85 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.85 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.97 %
Unclassified	root	N/A	3.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.54 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.69 %
Bacteroidetes bacterium QS_1_65_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium QS_1_65_9	1.69 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.85 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.85 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.97 %
Unclassified	root	N/A	3.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.54 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.69 %
Bacteroidetes bacterium QS_1_65_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium QS_1_65_9	1.69 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.85 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.85 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17085630	All Organisms → cellular organisms → Bacteria	2480	Open in IMG/M
2088090014\|GPIPI_17336166	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
2170459005\|F1BAP7Q01EB3KY	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
2199352025\|deepsgr__Contig_40797	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300000550\|F24TB_10201045	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300000891\|JGI10214J12806_10537925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1271	Open in IMG/M
3300005093\|Ga0062594_102490668	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005166\|Ga0066674_10203441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	942	Open in IMG/M
3300005175\|Ga0066673_10631282	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005179\|Ga0066684_10300182	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1066	Open in IMG/M
3300005179\|Ga0066684_10303630	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005181\|Ga0066678_10944495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300005184\|Ga0066671_10543023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	749	Open in IMG/M
3300005186\|Ga0066676_10362454	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005289\|Ga0065704_10048937	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300005290\|Ga0065712_10468950	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005294\|Ga0065705_10076584	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005332\|Ga0066388_102749701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300005338\|Ga0068868_102093944	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005434\|Ga0070709_10910444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	696	Open in IMG/M
3300005439\|Ga0070711_100129463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1878	Open in IMG/M
3300005447\|Ga0066689_10741923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300005451\|Ga0066681_10340816	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300005451\|Ga0066681_10460466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300005540\|Ga0066697_10062412	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300005566\|Ga0066693_10039119	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300005574\|Ga0066694_10123463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1220	Open in IMG/M
3300005574\|Ga0066694_10419680	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300005576\|Ga0066708_10431512	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300005598\|Ga0066706_10516203	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300005610\|Ga0070763_10255008	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300006046\|Ga0066652_100501611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1127	Open in IMG/M
3300006163\|Ga0070715_11078445	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300006797\|Ga0066659_10554305	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300006797\|Ga0066659_10622703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	877	Open in IMG/M
3300006797\|Ga0066659_11429710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300006871\|Ga0075434_100647844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1075	Open in IMG/M
3300006904\|Ga0075424_100734907	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300007255\|Ga0099791_10195843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	952	Open in IMG/M
3300009092\|Ga0105250_10266263	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300009137\|Ga0066709_101603603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	931	Open in IMG/M
3300009162\|Ga0075423_11491392	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300010038\|Ga0126315_10187750	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300010303\|Ga0134082_10421101	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300010323\|Ga0134086_10007170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3351	Open in IMG/M
3300010325\|Ga0134064_10023944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1750	Open in IMG/M
3300010325\|Ga0134064_10235795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300010396\|Ga0134126_12431102	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012199\|Ga0137383_10885970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300012200\|Ga0137382_10558566	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300012201\|Ga0137365_10284676	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300012201\|Ga0137365_10727920	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300012202\|Ga0137363_10630478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	906	Open in IMG/M
3300012203\|Ga0137399_10196447	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300012205\|Ga0137362_10954890	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300012207\|Ga0137381_10687839	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300012210\|Ga0137378_11058514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300012211\|Ga0137377_10357094	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium QS_1_65_9	1398	Open in IMG/M
3300012285\|Ga0137370_10997091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300012351\|Ga0137386_10156164	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium QS_1_65_9	1633	Open in IMG/M
3300012354\|Ga0137366_10543681	All Organisms → cellular organisms → Archaea	836	Open in IMG/M
3300012357\|Ga0137384_10143238	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2001	Open in IMG/M
3300012359\|Ga0137385_11018565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300012361\|Ga0137360_11269404	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300012361\|Ga0137360_11324661	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300012362\|Ga0137361_10515854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1098	Open in IMG/M
3300012362\|Ga0137361_10715476	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300012532\|Ga0137373_10966132	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300012924\|Ga0137413_10108356	Not Available	1746	Open in IMG/M
3300012957\|Ga0164303_10670459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	694	Open in IMG/M
3300012960\|Ga0164301_10301564	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300012961\|Ga0164302_11707814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300012986\|Ga0164304_10043799	All Organisms → cellular organisms → Bacteria	2393	Open in IMG/M
3300012989\|Ga0164305_10186703	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300013100\|Ga0157373_11327046	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300013297\|Ga0157378_10492895	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300013307\|Ga0157372_13331166	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300014166\|Ga0134079_10619010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300015357\|Ga0134072_10297859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300015358\|Ga0134089_10312516	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300015371\|Ga0132258_13631369	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300015374\|Ga0132255_100132750	All Organisms → cellular organisms → Bacteria	3443	Open in IMG/M
3300018072\|Ga0184635_10279933	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300018431\|Ga0066655_11019748	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300018433\|Ga0066667_11544750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300018482\|Ga0066669_11099508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	717	Open in IMG/M
3300018482\|Ga0066669_11860469	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300019789\|Ga0137408_1314770	All Organisms → cellular organisms → Bacteria → Proteobacteria	1970	Open in IMG/M
3300019868\|Ga0193720_1000073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	11664	Open in IMG/M
3300019879\|Ga0193723_1004082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	5078	Open in IMG/M
3300019887\|Ga0193729_1009689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4386	Open in IMG/M
3300020022\|Ga0193733_1083155	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300020034\|Ga0193753_10246838	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	795	Open in IMG/M
3300021344\|Ga0193719_10007408	All Organisms → cellular organisms → Bacteria	4554	Open in IMG/M
3300021344\|Ga0193719_10090627	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300022756\|Ga0222622_10054001	All Organisms → cellular organisms → Bacteria	2286	Open in IMG/M
3300025315\|Ga0207697_10094414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1270	Open in IMG/M
3300025905\|Ga0207685_10350759	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300025922\|Ga0207646_11187743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300026316\|Ga0209155_1225241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	583	Open in IMG/M
3300026538\|Ga0209056_10252755	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300026540\|Ga0209376_1091756	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300026550\|Ga0209474_10238829	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1130	Open in IMG/M
3300028819\|Ga0307296_10329746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	833	Open in IMG/M
3300030916\|Ga0075386_12114869	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300031057\|Ga0170834_100787024	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300031057\|Ga0170834_104350273	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300031231\|Ga0170824_102922025	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300031446\|Ga0170820_10782247	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300031446\|Ga0170820_16792870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1080	Open in IMG/M
3300031446\|Ga0170820_17503797	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031474\|Ga0170818_101247726	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300031474\|Ga0170818_105485028	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300031740\|Ga0307468_102407637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300033805\|Ga0314864_0007185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2093	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.98%
Host-Associated	Host-Associated	11.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.29%
Plants	Host-Associated → Plants	11.02%
Aquatic	Environmental → Aquatic	1.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.08%
Sediment	Environmental → Aquatic → Sediment	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.97%
Loam	Environmental → Terrestrial → Soil → Loam	8.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.39%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.24%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03570900	2088090014	Soil	MGHAIGALERLDSLETKLSKFATEMGPAALRAFGYNNKAEFVEKKLYVLRSYP
GPIPI_01217750	2088090014	Soil	AVAVARKLCVALWHILMGHLIGALERLDTLETKLGKFATEMVPPALRAFGYNNKAEFVEKKLYVLRSYP
E41_05234200	2170459005	Grass Soil	MLCVALWHVLMGHVIGALERLDTLETKLSKFATEMGPAALRAFGYNNKAEFVENKLYVLRSYP
deepsgr_00346550	2199352025	Soil	LCVALWHVLMGHTIGALERLDTLETKLSKFATELGPVALAAFGYNNKAEFVEKKLYVLRSYP
F24TB_102010451	3300000550	Soil	LERLDTLETKLSKFATEMGPAALRAFGYNNKADFVEKKLYVLRSYP*
JGI10214J12806_105379253	3300000891	Soil	MGHVIGALERLDTLETKLSKFATEMGPAALRAFGYNNKAEFVENKLYVLRSYP*
Ga0062594_1024906682	3300005093	Soil	MGHAVGALGRPDTLEIKQSKFATEMGSAALRAFGFNNKADFVEKKLYLLRSHP*
Ga0066674_102034412	3300005166	Soil	RKLCVALWHVLMGHVIGALERLDTLETKLSKFATELGPAALAAFGYNNKADFVKKKLYVLRSYP*
Ga0066673_106312822	3300005175	Soil	MEHAVGALGRPDPLEIKQSKFATEMGSAALRAFGFNNKADFVEKKLYVLRSYP*
Ga0066684_103001822	3300005179	Soil	MGHVIGALERLDTLETKLGKFATEIGPAALEALGYNNKAEFVHKKLYVLRSYP*
Ga0066684_103036302	3300005179	Soil	MEHAVGALGRPDPLEIKQSKFATEMGSAALRAFGFNNKADFVEKKLYLLRSHP*
Ga0066678_109444951	3300005181	Soil	LCVALWHVLMGHVIGALDRLDTLETKLSKFATEMGPAALHAFGYNNKADFVKKKLYVLRSYP*
Ga0066671_105430231	3300005184	Soil	MMGHAIGTLERLDTLQTKLSKFATEIGPAALIAFGYHNKADFVEKKLYVLRSYP*
Ga0066676_103624541	3300005186	Soil	MGHAIGTLERLDTLQTKLSKFATEIGPAALIAFGYNNKADFVEKKLYVLRSYP*
Ga0065704_100489372	3300005289	Switchgrass Rhizosphere	VAVARKLCVALWHVLMGHVIGALERLDTLETKLSKFATEIGPAALRVFGYNNKAEFVEKKLYVLRSYP*
Ga0065712_104689501	3300005290	Miscanthus Rhizosphere	HAIGALERLDTLVTKLTKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP*
Ga0065705_100765841	3300005294	Switchgrass Rhizosphere	MGHAVGALGRPDTLEIKQSKFATEMGSAALRAFGFNNKADFVEKKLYLLRSHPXPNHMSAAXG*
Ga0066388_1027497011	3300005332	Tropical Forest Soil	ERLDTLQTKLSKFATEIGPAALTAFGYNNRADFVEKKLYALRSYP*
Ga0068868_1020939441	3300005338	Miscanthus Rhizosphere	MGHAVGALGRPDTLEIKQSKFATEMGSAALRAFGFNNKADFVEKKLYLLRS
Ga0070709_109104441	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LKIWERIICVAPWHVLMGHAVGALGRPDTLEKSKFATEMGSTALRAFGFNNKADFVEKKLYLYEVT
Ga0070711_1001294631	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IGTLERLDTLQTKLSKFVTEIGPAALIVFGYDNRADFVQKKLYVLRSYP*
Ga0066689_107419231	3300005447	Soil	KLCVALWHVLMGHAIGALERLDTLETKLSKFATEMGPAALSALGYHNKADFVEKKLYVLRSYP*
Ga0066681_103408162	3300005451	Soil	LKIWERIICVALGHGLMGHAVGALDRPDTLEIKLSKFATEMGSAALRAFGFNNKADFVEKKLYLLRSHP*
Ga0066681_104604661	3300005451	Soil	CVALWHVLMGHAIGALERLDTLQTKLSKFATEMGPAALRVFGYNNKADFVEKKLYVLRSYP*
Ga0066697_100624121	3300005540	Soil	GHAIGALERLDTLQTKLSKFATEMGPAALRAFGYNNKADFVEKKLYVLRSYP*
Ga0066693_100391191	3300005566	Soil	GALERLDTLQTKLSKFATEMGPAALRAFGYNNKADFVDKKLYVLRTYP*
Ga0066694_101234631	3300005574	Soil	ARKLCVALWHVLMGHAIGALERLDTLQTKLSKFATEMGPAALRAFGYNNKADFVDKKLYVLRTYP*
Ga0066694_101682561	3300005574	Soil	RRGRNKAAVAVARKLCVALWHVLMGHVIGALERLDTLETKLSKFATELGPAALAAFGYNNKADFVKKKLYVLRSYP*
Ga0066694_104196801	3300005574	Soil	PGEHPPSHLVPASPSPVTGNMRNHGHVLMGHVIGALERLDALETKLSKFATEMGPAALLAFGYNNKAEFVEKKPYVLRSYP*
Ga0066708_104315123	3300005576	Soil	MGHVIGALERLDALETKLSKFATEMGPAALLAFGYNNKAEFVEKKPYVLRSYP*
Ga0066706_105162033	3300005598	Soil	MMGHAIGTLERLDTLQTKLSKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP*
Ga0070763_102550081	3300005610	Soil	RGRNKAAVAVARKLCVALWHVLMGHVIGALERLDTLETKLSKFATEMGPAALHAFGYNNKADFVKKKLYVLRSYP*
Ga0066652_1005016111	3300006046	Soil	LERLDTLETKLSKFATELGPAALAAFGYNNKADFVKKKLYVLRSYP*
Ga0070715_110784451	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	WRGANDSAMGHVIGALERLDTLQTKLGKFATEMGPAALRAFGFNNKAEFVEKKLYVLRSYP*
Ga0066659_105543052	3300006797	Soil	MGHVVGALERLDTLETKLSKFATEMGPSALSALGYHNKADFVEKKLYVLRSYP*
Ga0066659_106227031	3300006797	Soil	NKAAVAVARKLCVALWHVMMGHAIGTLERLDTLQTKLSKFATELGPVALAAFGYNNKAEFVEKKLYVLRSYP*
Ga0066659_114297102	3300006797	Soil	ERLDTLETKLSKFATEMGPSALSALGYLNKADFVEKKLYVLRSYP*
Ga0075434_1006478442	3300006871	Populus Rhizosphere	MGHAVGALGRPDPLEIKQSKFATEMGSAALRAFGFNNKADFVAKKLYLVRSQP*
Ga0075424_1007349072	3300006904	Populus Rhizosphere	VAVARKLCVALWHVMMGHLIGALERLDTLQTKLSKFATELGPAALSAFGYNNKADFVQKKLYVLRSYP*
Ga0099791_101958431	3300007255	Vadose Zone Soil	GRNKAAVAVARKLCVALWHVLMGHAIGALERLDTLETKLSKFATEMGPAALAAFGYNNKADFVKKKLYVLRSYP*
Ga0105250_102662632	3300009092	Switchgrass Rhizosphere	MGHPVGALGRPDTLEIKLSKFATEMVSAALCAFGFNNKADFVAKKLYLLRSHL*
Ga0066709_1016036031	3300009137	Grasslands Soil	ALWHVLMGHAIGALERLDTLQTKLSKFATEMGPAALRAFGYNNKADFVEKKLYVLRTYP*
Ga0075423_114913922	3300009162	Populus Rhizosphere	VAVARKLCVALWHVLMGHVIGALERLDTLQTKLSKFATELGPAALHAFGYNNKADFVKTKLYVLRSYP*
Ga0126315_101877502	3300010038	Serpentine Soil	CVALWHVLMGHVIGALEGLDTLETKLSKFATELGPAALAAFGYNNKADFVKKKLYVLRSYP*
Ga0134082_104211013	3300010303	Grasslands Soil	GRNKAAVAVARKLCVALWHVMMGHLIGALERLDTLETKLSKFATEVRPAALTAFGYNNKADFAEKKVYVLRSYP*
Ga0134086_100071704	3300010323	Grasslands Soil	MGHAIGTLERLDTLQTKLSKFATEIGPAALTAFGYNNRADFVQKKLYVLRSYP*
Ga0134064_100239443	3300010325	Grasslands Soil	GRNKAAVAVARKLCVALWHLMMGHAIGTLERLDTLQTKLSKFATEIGPAALTAFGYNNRADFVQKKLYVLRSYP*
Ga0134064_102357951	3300010325	Grasslands Soil	HVIMGHAIGTLERLDTLQTKLSKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP*
Ga0134126_124311022	3300010396	Terrestrial Soil	MMGHVIGTLERLDTPQTKLSKFATEIGPAALTAFGYNNRADFVQKKLYVLRSYP*
Ga0137383_108859701	3300012199	Vadose Zone Soil	MGHAIGTLERLDTLQTKLSKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP*
Ga0137382_105585661	3300012200	Vadose Zone Soil	MGHAVGALDRPDTLEIKLSKFATEMGSAALRAFGFNNKADFVAKKLYLLRSYP*
Ga0137365_102846762	3300012201	Vadose Zone Soil	MMGHAIGTLERLDTLQTKLSKFATEIGPTALTAFGYNNRADFVQKKLYVLRSYP*
Ga0137365_107279201	3300012201	Vadose Zone Soil	AAVAVARKLCVALWHVMMGHAIGTLERLDTLQTKLSKFATEIGPVALTAFGYHNRADFVQKKLYVLRSYP*
Ga0137363_106304782	3300012202	Vadose Zone Soil	AVAVARKLCVALWHVLMGHVIGALERLDTLETKLSKFATEIGPAALRAFGYNNKAEFVERKLYVLRSYP*
Ga0137399_101964474	3300012203	Vadose Zone Soil	IGTLERLDTLQTKLSKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP*
Ga0137362_109548901	3300012205	Vadose Zone Soil	RPRITRLRPAAVAVARKFCVALWHVLMGHVIGALERLDTLETKLSKFATEIGPAALRAFGYNNKAEFVERKLYVLRSYP*
Ga0137381_106878391	3300012207	Vadose Zone Soil	VARKLCVALWHVMMGHAIGTLERLDTLQTKLSKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP*
Ga0137378_110585141	3300012210	Vadose Zone Soil	RLDTLQTKLSKFATEIGPAALTAFGYNNRADFVQKKLYVLRSYP*
Ga0137377_103570941	3300012211	Vadose Zone Soil	RKLCVAVWHVLMGHAIGALERLDTLETKLSKFATEMGPAALHAFGYNNKADFVKKKLYVLRSYP*
Ga0137370_109970912	3300012285	Vadose Zone Soil	GRNKAAVAVARKLCVALWHVLMGHVIGALERLDTLETKLSKFATELGPAALAAFGYNNKADFVKKKLYVLRSYP*
Ga0137386_101561641	3300012351	Vadose Zone Soil	NKAAVAVARKLCVALWHVLMGHVIGALERLDTLETKLSKFATEMGPAALHAFGYNNKADFVKKKLYVLRSYP*
Ga0137366_105436811	3300012354	Vadose Zone Soil	AVAVARKLCVALWHLMMGHAIGTLERLDTLQTKLSKFATEIGPTALTAFGYNNRADFVQKKLYVLRSYP*
Ga0137384_101432383	3300012357	Vadose Zone Soil	MGHAIGAIERLDTLQTKLSKLATELGPDALRAFGFHNKADFVEKKLYLLKSYP*
Ga0137385_110185651	3300012359	Vadose Zone Soil	HAIGTLERLDTLQTKLSKFATEIGPTALTAFGYNNRADFVQKKLYVLRSYP*
Ga0137360_112694041	3300012361	Vadose Zone Soil	GHLIGALERLDSLQTKLSKFATELGPAALTAFGYNNKADFVEKKLYVLRSYP*
Ga0137360_113246611	3300012361	Vadose Zone Soil	LERLDTLQTKLSKFATEMGPAALSALGYHNKADFVEKKLYVLRSYP*
Ga0137361_105158541	3300012362	Vadose Zone Soil	NKAAVAVARKLCVALWHVLMGHAIGALERLDTLETKLSKFATEMGPAALAAFGYNNKADFVEKKLYVLRSYP*
Ga0137361_107154761	3300012362	Vadose Zone Soil	LQTKLSKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYPSPNHMSASRR*
Ga0137373_109661321	3300012532	Vadose Zone Soil	VMMGHAIGALERLDTLETKLSKFATEMGPAALAAFGYNNKADFVEKKLYVLRSYP*
Ga0137358_100308711	3300012582	Vadose Zone Soil	QRREPAVEARSGRNGAAVAVAQKLCVALWHVLMGHTIGALERLDTLETKLSKFATELGPVALAAFGYNNKAEFVEKKLYVLRSYP*
Ga0137413_101083563	3300012924	Vadose Zone Soil	LERLDTLQTKLSKFATEIGPAALTAFGYHNRADFVQKKLYVLRSYP*
Ga0164303_106704591	3300012957	Soil	MGHAVGTLDRPDTLEIKLSKFATEMGSAALRAFGFNNKADFVAKKLYLLRSHP*
Ga0164301_103015643	3300012960	Soil	MGHAVGALGRPDTLEIKLSKFATEMGSAALRAFGFNNKADFVEKKLYLLRSHP*
Ga0164302_117078141	3300012961	Soil	RKLCVALWHVLMGHVIGALERLDTLETKLSKFATEIGPAALHAFGYNNKAEFVEKKLYVLRSYP*
Ga0164304_100437993	3300012986	Soil	MGHPVGALGRPDTLEIKLSKFATEMVSAALRAFGFNNKADFVAKKLYLLRSHL*
Ga0164305_101867031	3300012989	Soil	TSKIWQRIICVALWHVLMGHPVGALDRPDTLEIKLSKFATEMGSAALRAFGFNNKADFVEKKLYLLRSHP*
Ga0157373_113270461	3300013100	Corn Rhizosphere	QDQPPSTSKIWQRIICVALWHVLMGHPVGALGRPDTLEIKQSKFATEMGSAALRAFGFNNKADFAAKKLYLLRSHL*
Ga0157378_104928954	3300013297	Miscanthus Rhizosphere	WQRIICVALWHVLMGHAVGALGRPDTLEIKQSKFATEMGSAALRAFGFNNKADFVEKKLYLLRSHH*
Ga0157372_133311662	3300013307	Corn Rhizosphere	MGHAVGALGRPDPLEIKQSKFATEMGSAALRAFGFNNKADFVAKKLYLLRSHL*
Ga0134079_106190102	3300014166	Grasslands Soil	LMGHAIGALERLDTLQTKLSKFATEMGPAALRAFGYNNKADFVEKKLYVLRTYP*
Ga0134072_102978591	3300015357	Grasslands Soil	KAAVAVARKLCVALWHVLMGHAIGALERLDTLETKLSKFATEMGPAALAAFGYNNKADFVEKKLYVLRSYP*
Ga0134089_103125162	3300015358	Grasslands Soil	LCVALWHVLMGHAIGALERLDTLETKLSKFATEMGPAALAAFGYNNKADFVEKKLYVLRSYP*
Ga0132258_136313693	3300015371	Arabidopsis Rhizosphere	VAVARKLCVALWHVLMGHAIGALERLDTLETKLSKFATEMGPAALRAFGYNNKAEFVEKKLYVLRSYP*
Ga0132255_1001327506	3300015374	Arabidopsis Rhizosphere	WHVLMGHAVGALGRPDPLEIKQSKFATEMGSAALRAFGFNNKADFVAKKLYLLRSQP*
Ga0182032_114737882	3300016357	Soil	SRRGRNKAAVAVARKLCVALWHVLMGHVIGALERLDTLETKLSKFATEIGPAALRAFGYNNKAEFVEKKLYVLRSYP
Ga0184635_102799331	3300018072	Groundwater Sediment	RPSSCEIVLMGHVIGALERLDTLETKLSQFATEIGPAALRAFGYKNKAEFVEKKLYVLRSYP
Ga0066655_110197481	3300018431	Grasslands Soil	VAVARKLCVALWHVLMGHVIGPLERLDTLETKLSKFATEIGPAALRAFGYNNKAEFVERKLYVLRSYP
Ga0066667_115447502	3300018433	Grasslands Soil	MGHVIGALERLDTLETKLGKFATEIGPAALQALGYNNKAEFVHKKLYVLRSYP
Ga0066669_110995082	3300018482	Grasslands Soil	SPVTGNMRNHGHVLMGHVIGALERLDALETKLSKFATERGPAALRAFGYNNKAEFVEKKPYVLRSYP
Ga0066669_118604691	3300018482	Grasslands Soil	MGHAIGTLERLDTLQTKLSKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP
Ga0137408_13147701	3300019789	Vadose Zone Soil	RLDTLQTKLSKFATELGPVALAAFGYNNKAEFVEVEKKLYVLRSYP
Ga0193720_10000732	3300019868	Soil	MGHIVGALERLDTLETKLSKFATEMGPAALSALGYHNKADFVKKKLYVLRSYP
Ga0193723_10040823	3300019879	Soil	LKIWQRIIWVALWHVLMGHAVGALDRPDTLEIKLSKFATEMGSAALRAFGFNNKADFVAKKLYLLRSYP
Ga0193729_10096896	3300019887	Soil	MGHVIGALERLDTLETKLSKFATEMGPAALHAFGYNNKADFVKKKLYVLRSYP
Ga0193733_10831551	3300020022	Soil	VARKLCVALWHVMMGHAIGTLERLDTLQTKLSKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP
Ga0193753_102468382	3300020034	Soil	VAVARKLCVALWHVLMGHVIGALERLDTLETKLSKFATEMGPAALHAFGYNNKADFVKKKLYVLRSYP
Ga0193719_100074081	3300021344	Soil	IIWVALWHVLMGHAVGALDRPDTLEIKLSKFATEMGSAALRAFGFNNKADFVAKKLYLLRSYP
Ga0193719_100906273	3300021344	Soil	KLCVAVWHVLMGHIVGALERLDTLETKLSKFATEMGPAALSALGYHNKADFVEKKLYVLRSYP
Ga0222622_100540015	3300022756	Groundwater Sediment	MGHAVGALGRPDTLEIKQSKFATEMGSAALRAFGFNNKADFVEKKLYLLRSHP
Ga0207697_100944142	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	ALWHVLMGHAIGALERLDTLATKLTKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP
Ga0207685_103507592	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	HWRGANDSAMGHVIGALERLDTLQTKLGKFATEMGPAALRAFGFNNKAEFVEKKLYVLRSYP
Ga0207646_111877432	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGHVIGALERLDTLETKLSKFATEMGPAALRAFGYNSKADFVEKKLYVLRSYP
Ga0209155_12252412	3300026316	Soil	KAAVAVARKLCVALWHVLMGHVIGALERLDTLETKLSKFATEIGPAALRAFGYNNKADFVEKKLYVLRSYP
Ga0209056_102527551	3300026538	Soil	KGMEEAVARKLCVALWHVIMGHAIGTLERLDTLQTKLSKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP
Ga0209376_10917563	3300026540	Soil	RASHRAATFKAAEHSKGMEEAVARKLCVALWHVIMGHAIGTLERLDTLQTKLSKFATEIGPAALTAFGYNNKADFVEKKLYVLRSYP
Ga0209474_102388291	3300026550	Soil	LMGHVIGALERLDTLETKLSKFATEIGPAPLRAFGYNNKADFVEKKLYVLRSYP
Ga0307296_103297461	3300028819	Soil	MGHAVGALDLPDTLEIKLSKFATEMGSAALRAFGFNNKADFVKKKTQPLTKSPVT
Ga0075386_121148691	3300030916	Soil	VIGALERLDTLETKLSKFATEIGPAALHAFGYNNKADFVKKKLYVLRSYP
Ga0170834_1007870241	3300031057	Forest Soil	VARKLCVALWHVLMGHAIGALERLDTLETKLSKFATEMGPVALRALGYHNKAEFVEKQLYVLRSYP
Ga0170834_1043502731	3300031057	Forest Soil	KLCVALWHVLMGHVTGALERLDTLETKLGKFATEMGPAALRAFGYNNKADFVEKKLYVLRSYP
Ga0170824_1029220253	3300031231	Forest Soil	VLMGHLIGAFERPDTLATKLSKFATEIGPGALTAFGYNNKADFVEKKLYVLRSYP
Ga0170820_107822471	3300031446	Forest Soil	IGALERLDTLKTKLSKFATEIGPAALRAFGYHNKAEFVEKKLYVLRSYP
Ga0170820_167928703	3300031446	Forest Soil	IGALERLDTLETKLSKFATEMGPAALRAFGYNIKAEFVEKKLYVLRSYP
Ga0170820_175037972	3300031446	Forest Soil	MGHLIGALERLDTLETKLGKFATEMGPAALRAFRYNNKAEFVEKKLYVLRSYP
Ga0170818_1012477261	3300031474	Forest Soil	VAVARKLCVALWHVLMGHVIGALERLDTLKTKLSKFATEIGPAALRAFGYHNKAEFVEKKLYVLRSYP
Ga0170818_1054850283	3300031474	Forest Soil	MGHAVGALGRPDALEIKQSKSATDMGSAALRAFGFNNKADFVEKKLYLLRSHP
Ga0307468_1024076372	3300031740	Hardwood Forest Soil	VARKLCVAVWHVLMGHVVGALERLDTLQTKLSKFATEMGPAALSALGYHNKADFVEKKLYVLRSYP
Ga0314864_0007185_121_282	3300033805	Peatland	MGHAIAALERLDTLETKLGKFATEIGPAAIAAFGLNNKADFVQKKLYVLRSYP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076525

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences