Metagenome / Metatranscriptome Family F076412

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076412
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	73 residues
Representative Sequence	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLGPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAE
Number of Associated Samples	65
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	22.22 %
% of genes near scaffold ends (potentially truncated)	49.15 %
% of genes from short scaffolds (< 2000 bps)	96.61 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (81.356 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.068 % of family members)
Environment Ontology (ENVO)	Unclassified (81.356 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.627 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.34% β-sheet: 14.14% Coil/Unstructured: 51.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
a.4.5.0: automated matches	d5ffxa_	5ffx	0.8645
a.4.5.0: automated matches	d3bpva_	3bpv	0.85157
a.4.5.28: MarR-like transcriptional regulators	d1jgsa_	1jgs	0.85119
e.10.1.1: Prokaryotic type I DNA topoisomerase	d1gkub3	1gku	0.84281
a.4.5.0: automated matches	d6pcoa_	6pco	0.84162

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF08238	Sel1	2.54
PF01656	CbiA	0.85
PF04311	DUF459	0.85
PF13614	AAA_31	0.85
PF04392	ABC_sub_bind	0.85
PF04352	ProQ	0.85
PF07589	PEP-CTERM	0.85
PF13592	HTH_33	0.85
PF13358	DDE_3	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	0.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.85
COG3109	sRNA-binding protein ProQ	Signal transduction mechanisms [T]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.36 %
All Organisms	root	All Organisms	18.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.36 %
cellular organisms	root	All Organisms → cellular organisms	18.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.10 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.17 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.36 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	5.08 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.69 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.36 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	5.08 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	1.69 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	1.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.36 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.69 %
Dyella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella soli	1.69 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1.69 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.36 %
Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1	1.69 %
Dyella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella soli	1.69 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1.69 %
Bradyrhizobium sp. Leo170	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	0.85 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_104700899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	695	Open in IMG/M
3300005434\|Ga0070709_10261553	Not Available	1250	Open in IMG/M
3300005764\|Ga0066903_101138872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1442	Open in IMG/M
3300005764\|Ga0066903_107006550	Not Available	585	Open in IMG/M
3300005764\|Ga0066903_109074315	Not Available	503	Open in IMG/M
3300005764\|Ga0066903_109094367	Not Available	502	Open in IMG/M
3300006173\|Ga0070716_100922423	Not Available	685	Open in IMG/M
3300006175\|Ga0070712_100551601	Not Available	971	Open in IMG/M
3300010360\|Ga0126372_11618963	Not Available	687	Open in IMG/M
3300010366\|Ga0126379_10934211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	971	Open in IMG/M
3300010366\|Ga0126379_12763927	Not Available	587	Open in IMG/M
3300010880\|Ga0126350_12378082	Not Available	836	Open in IMG/M
3300012971\|Ga0126369_12120420	Not Available	650	Open in IMG/M
3300012971\|Ga0126369_13503129	Not Available	514	Open in IMG/M
3300015373\|Ga0132257_103562954	Not Available	566	Open in IMG/M
3300016270\|Ga0182036_10574976	Not Available	901	Open in IMG/M
3300016270\|Ga0182036_11035693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	678	Open in IMG/M
3300016294\|Ga0182041_11710453	Not Available	582	Open in IMG/M
3300016319\|Ga0182033_11353889	Not Available	640	Open in IMG/M
3300016319\|Ga0182033_12063638	Not Available	520	Open in IMG/M
3300016341\|Ga0182035_10881352	Not Available	789	Open in IMG/M
3300016341\|Ga0182035_11438742	Not Available	619	Open in IMG/M
3300016357\|Ga0182032_11173354	Not Available	660	Open in IMG/M
3300016357\|Ga0182032_11431498	Not Available	599	Open in IMG/M
3300016357\|Ga0182032_12001721	Not Available	508	Open in IMG/M
3300016371\|Ga0182034_10273310	Not Available	1343	Open in IMG/M
3300016387\|Ga0182040_10756582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	798	Open in IMG/M
3300016404\|Ga0182037_11692578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	564	Open in IMG/M
3300016422\|Ga0182039_10433474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300016445\|Ga0182038_10557667	Not Available	984	Open in IMG/M
3300016445\|Ga0182038_10590261	Not Available	958	Open in IMG/M
3300016445\|Ga0182038_10675276	Not Available	898	Open in IMG/M
3300016445\|Ga0182038_11271479	Not Available	657	Open in IMG/M
3300017970\|Ga0187783_10826924	Not Available	668	Open in IMG/M
3300018060\|Ga0187765_10863692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300018062\|Ga0187784_11089529	Not Available	634	Open in IMG/M
3300022533\|Ga0242662_10133202	Not Available	738	Open in IMG/M
3300025915\|Ga0207693_10327838	Not Available	1199	Open in IMG/M
3300025916\|Ga0207663_11339332	Not Available	577	Open in IMG/M
3300027908\|Ga0209006_10708687	Not Available	823	Open in IMG/M
3300031543\|Ga0318516_10279042	Not Available	966	Open in IMG/M
3300031543\|Ga0318516_10812256	Not Available	528	Open in IMG/M
3300031545\|Ga0318541_10451268	Not Available	719	Open in IMG/M
3300031561\|Ga0318528_10440604	Not Available	699	Open in IMG/M
3300031561\|Ga0318528_10541067	Not Available	625	Open in IMG/M
3300031573\|Ga0310915_10106768	Not Available	1898	Open in IMG/M
3300031573\|Ga0310915_10397140	Not Available	979	Open in IMG/M
3300031573\|Ga0310915_10599916	Not Available	780	Open in IMG/M
3300031573\|Ga0310915_10678451	Not Available	728	Open in IMG/M
3300031573\|Ga0310915_11186812	Not Available	528	Open in IMG/M
3300031679\|Ga0318561_10611595	Not Available	600	Open in IMG/M
3300031679\|Ga0318561_10759729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300031681\|Ga0318572_10518675	Not Available	710	Open in IMG/M
3300031682\|Ga0318560_10113468	Not Available	1412	Open in IMG/M
3300031719\|Ga0306917_10291049	Not Available	1260	Open in IMG/M
3300031719\|Ga0306917_10589326	Not Available	874	Open in IMG/M
3300031719\|Ga0306917_10690241	Not Available	802	Open in IMG/M
3300031719\|Ga0306917_11017394	Not Available	647	Open in IMG/M
3300031744\|Ga0306918_10210429	Not Available	1470	Open in IMG/M
3300031744\|Ga0306918_10363059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1125	Open in IMG/M
3300031747\|Ga0318502_10213487	Not Available	1119	Open in IMG/M
3300031764\|Ga0318535_10335519	Not Available	676	Open in IMG/M
3300031771\|Ga0318546_11113297	Not Available	555	Open in IMG/M
3300031771\|Ga0318546_11334539	Not Available	504	Open in IMG/M
3300031779\|Ga0318566_10584584	Not Available	544	Open in IMG/M
3300031781\|Ga0318547_11052684	Not Available	509	Open in IMG/M
3300031798\|Ga0318523_10407619	Not Available	675	Open in IMG/M
3300031798\|Ga0318523_10502655	Not Available	600	Open in IMG/M
3300031805\|Ga0318497_10464337	Not Available	709	Open in IMG/M
3300031805\|Ga0318497_10885655	Not Available	501	Open in IMG/M
3300031833\|Ga0310917_10204433	Not Available	1321	Open in IMG/M
3300031833\|Ga0310917_10235720	Not Available	1230	Open in IMG/M
3300031846\|Ga0318512_10429367	Not Available	666	Open in IMG/M
3300031859\|Ga0318527_10486122	Not Available	527	Open in IMG/M
3300031879\|Ga0306919_10085408	Not Available	2186	Open in IMG/M
3300031890\|Ga0306925_10733349	Not Available	1031	Open in IMG/M
3300031890\|Ga0306925_10796255	Not Available	981	Open in IMG/M
3300031890\|Ga0306925_11075487	Not Available	815	Open in IMG/M
3300031890\|Ga0306925_11123699	Not Available	793	Open in IMG/M
3300031890\|Ga0306925_11826786	Not Available	581	Open in IMG/M
3300031890\|Ga0306925_11888438	Not Available	568	Open in IMG/M
3300031893\|Ga0318536_10228711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1	946	Open in IMG/M
3300031897\|Ga0318520_10571144	Not Available	702	Open in IMG/M
3300031910\|Ga0306923_10341524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella soli	1708	Open in IMG/M
3300031910\|Ga0306923_10387499	Not Available	1591	Open in IMG/M
3300031910\|Ga0306923_10621880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	1210	Open in IMG/M
3300031910\|Ga0306923_10934033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	948	Open in IMG/M
3300031910\|Ga0306923_11077285	Not Available	867	Open in IMG/M
3300031910\|Ga0306923_12508040	Not Available	508	Open in IMG/M
3300031912\|Ga0306921_10526822	Not Available	1372	Open in IMG/M
3300031912\|Ga0306921_10694218	Not Available	1170	Open in IMG/M
3300031912\|Ga0306921_10716293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	1149	Open in IMG/M
3300031912\|Ga0306921_11476793	Not Available	744	Open in IMG/M
3300031912\|Ga0306921_11960859	Not Available	625	Open in IMG/M
3300031941\|Ga0310912_11279964	Not Available	556	Open in IMG/M
3300031942\|Ga0310916_11368691	Not Available	581	Open in IMG/M
3300031945\|Ga0310913_11067942	Not Available	565	Open in IMG/M
3300031946\|Ga0310910_10947688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1	674	Open in IMG/M
3300031947\|Ga0310909_10085117	Not Available	2514	Open in IMG/M
3300031947\|Ga0310909_10465600	Not Available	1061	Open in IMG/M
3300031947\|Ga0310909_11002131	Not Available	682	Open in IMG/M
3300031947\|Ga0310909_11644357	Not Available	508	Open in IMG/M
3300031954\|Ga0306926_10042132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5423	Open in IMG/M
3300031954\|Ga0306926_11651651	Not Available	733	Open in IMG/M
3300031959\|Ga0318530_10165950	Not Available	901	Open in IMG/M
3300032010\|Ga0318569_10581132	Not Available	522	Open in IMG/M
3300032044\|Ga0318558_10172269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1049	Open in IMG/M
3300032055\|Ga0318575_10253586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300032059\|Ga0318533_10384255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella soli	1024	Open in IMG/M
3300032261\|Ga0306920_100682867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1514	Open in IMG/M
3300032261\|Ga0306920_101174992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1110	Open in IMG/M
3300032261\|Ga0306920_101524460	Not Available	954	Open in IMG/M
3300032261\|Ga0306920_101970313	Not Available	819	Open in IMG/M
3300032261\|Ga0306920_102109924	Not Available	786	Open in IMG/M
3300032261\|Ga0306920_102146286	Not Available	778	Open in IMG/M
3300032261\|Ga0306920_103719955	Not Available	559	Open in IMG/M
3300033289\|Ga0310914_11223522	Not Available	653	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.15%
Host-Associated	Host-Associated	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.15%
Plants	Host-Associated → Plants	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.29%
Loam	Environmental → Terrestrial → Soil → Loam	9.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	82.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1047008992	3300005332	Tropical Forest Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLGYLVYAGLAKLRGAGRPKVFRVKITEAGQRAVAEEACSGCRHVPMI*
Ga0070709_102615533	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPATCRRIPPNLSDEQLRALRFLARLPSGCTEAMLLEQGFTVGQIGYLVYAGLAKLRRVGPTKVFRVKITAAGRRAMAE*
Ga0066903_1011388721	3300005764	Tropical Forest Soil	SMATLSDEQLRALRFLARHPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRRAGRPKVFRVKITEAGQRAVAEEACSGCRHVPMI*
Ga0066903_1070065502	3300005764	Tropical Forest Soil	EQLRALRFLARHPGGCTEATLLKQGFTAVQLGYLVYAGLAKLRGTGRPKVFRVKITAAGRKAIAAGAD*
Ga0066903_1090743152	3300005764	Tropical Forest Soil	MSTMATLSDEHLRALRFLAQHSNGFTEATLLDQGFTAGQLGYLVYAELAKLRRPSPRTMAFRVKITTAGRKAIAE*
Ga0066903_1090943671	3300005764	Tropical Forest Soil	TMATLSDEQLRALRFLARHPGGCTEATLLGQGFTAVQLSQLVFTGLAKLRGESRPKVFRVKITEAGQRAIAE*
Ga0070716_1009224232	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	EQLRALRFLARLPSGCTEAMLLEQGFTVGQIGYLVYAGLAKLRRVGPTKVFRVKITAAGRRAMAE*
Ga0070712_1005516012	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MATLSDEQLRALRFLARHPGGCTEATLLEQGFTTGQLGPLVYAGLAKLRGESRPKVFRVKITEAGRKAIAAGVD*
Ga0126372_116189631	3300010360	Tropical Forest Soil	MATLSDEQLRALRILAHHPRGVTEAKLLEQGFTAGQLSPLVIAGLANLRRGGRPTVLRVKITAAGRKAIAE*
Ga0126379_109342111	3300010366	Tropical Forest Soil	LAIGLKSLPETSRCRKTEQWATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSQLVFAGLAKLRGESRPKVFRVKITEAGRKAIAAGAD*
Ga0126379_127639271	3300010366	Tropical Forest Soil	MATLSDEQLRALRFLARHPGGRTEATLLRQGFTAVQLGQLVYAGLAKLRGTGRPKVFRVKITAAGRKAIAEDS*
Ga0126350_123780821	3300010880	Boreal Forest Soil	MATLSDEHLRALRFLAQHRGGCAEVVLVAQGFTTAQVGHLVCAGLAKIRGVAGRPKFLVKITAAGRRTIAGLPELLGEGRARVNG
Ga0126369_121204202	3300012971	Tropical Forest Soil	LATLSDEHLRALRFLARHPGGCTEATLLKQGFTTGQLSQLVFIGLAKIRRAGGIGRPKLLLVKVTAAGRKAITE*
Ga0126369_135031291	3300012971	Tropical Forest Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLGYLVYVGLAKLRGAGRPKVFRVKITEAGQRAVAEEACSGCRHVPMI*
Ga0132257_1035629542	3300015373	Arabidopsis Rhizosphere	MATLSDEHLRALRFLARHPYGVTEATLLKQGFTVGQLSYLVYAGLAKLRRAGPTTMALRVKITVPGRKAIAE*
Ga0182036_105749761	3300016270	Soil	MATLSDEQPRALRFLARHPGCRTEATLLEQGFTAVQLGYLVYAGLAKLRGAGRPKMFRVKITAAGQRAIAAGVD
Ga0182036_110356932	3300016270	Soil	DEQLRALRFLARYPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRRAGRPKVFRVKITEAGQRAVAE
Ga0182041_117104531	3300016294	Soil	DEQLRALRFLARHPGGCTEATLLEQGFTTRQLSQLVFTGLAKLRVVGRPKLFRVKITVVGRKAIAE
Ga0182033_113538891	3300016319	Soil	CRKIEQMATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSYLVYAGLAKLRGESRPKVFRVKITEAGRKAIAAGAD
Ga0182033_120636381	3300016319	Soil	QKLRALRFLARCPGPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRGTGRSKVFRVKITEAGRKAIAAEAD
Ga0182035_108813521	3300016341	Soil	RALRFLARHPGGCTEATLLKQGFTTAQLGQLVYAGLAKLRGTGRSKVFRVKITEAGRKAIAAEAD
Ga0182035_114387422	3300016341	Soil	MADLSDERLRALRFLARHPGGCTEATLLEQGFTTRQLSQLVFTGLAKLRVVGRPKLFRVKITVVGRKAIAE
Ga0182032_111733542	3300016357	Soil	MATLGDEQLRALRFLARHPGGCTEATLLRQGFTAVQLGPLVYARLAKLRGTGRPKVFRVKITAAGRKAIAAGVD
Ga0182032_114314981	3300016357	Soil	MTALTDEHLRALRFLAGRPGGCTEARLLEQGFTTGQLGHLVHAGLAKLRAVSGPVKFRVKITKAGQRALAETARPA
Ga0182032_120017212	3300016357	Soil	REGRARVSMATLSDEQLRALRFLARYPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRRAGRPEVFRVKITEAGQRAVAEEACSGCRHVPMI
Ga0182034_102733103	3300016371	Soil	PAMATLSEEQLRALRFLARHPGGCTEATLLKHGFTAVQLSQLVFAGLAKLRVVGRPKLFRVKITTAGQRAIAADAD
Ga0182040_107565821	3300016387	Soil	HASAREGRARVSMATLSDEQLRALRFLARHPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRRAGRPKVFRVKITEAGQRAVAE
Ga0182037_116925781	3300016404	Soil	QLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRSKVFRVKITAAGQRAIAE
Ga0182039_104334741	3300016422	Soil	MATLSDEQLRALRFLARHPGGCTEATLLRQGFTAVQLGPLVYARLAKLRGAGRPKVFRVKITEAGQRAIAADAD
Ga0182038_105576671	3300016445	Soil	MTTLTDEHLRALRFLAGRPGGCTEARLLEQGFTTGQLGHLVHAGLAKLRAVSGPVKFRVKITKAGQRALAETARPA
Ga0182038_105902612	3300016445	Soil	MATLSDEQPRALRFLARHPGCRTEATLLEQGFTAVQLGYLVYAGLAKLRGAGRPKMFRVKITAAGQRAIAE
Ga0182038_106752761	3300016445	Soil	EQLRALRFLARHPGGCTEATLLRQGFTAVQLGPLVYAGLAKLRGTGRPKVFRVKITEAGQKAIAE
Ga0182038_112714791	3300016445	Soil	LRREHRAAARAAREGRVRLSMAALSDEQLRALRFLARQPGGCTEATLLKQGFTAVQLGPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAE
Ga0187783_108269241	3300017970	Tropical Peatland	QHLRVLHFLARHPGGCTDAVLLERGFTTGHLGWLVYTGLAKLRRGGGPTKLMRVKITDAGRKAIAE
Ga0187765_108636921	3300018060	Tropical Peatland	MAALSDEQLRALRFLARHPGGCTEATLLEQGFTTRQLSQLVFTGLAKLRVVGRPKLFRVKITVVGRKAIAE
Ga0187784_110895292	3300018062	Tropical Peatland	MANLTDEQRRALRLLVRSPNGCPEATFLEQGFTIGQLGELVFRRLAKMRSAGRPKGFVVKITEVGRKAIAE
Ga0242662_101332021	3300022533	Soil	MATLSDEHLRALRFLARLPSGCTEAMLLEQGFTVGQIGYLVYAGLAKLRRVGPTKVFRVKITAAGRRAMAE
Ga0207693_103278382	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPNLSDEHLRALRFLARHSNGFTEATLLKQGFTVGQIGYLVYAGLAKLRRVGPTKVFRVKITAAGRRAMAE
Ga0207663_113393321	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPNLSDEHLRALRFLARHSNGFTEATLLKQGFTVGQLSHLVYAGLAKLRRPGSPTTAFRVKITMAGRKAIAGG
Ga0209006_107086872	3300027908	Forest Soil	MATVSDEHLRALQFLARHPGGCTEATLLKQGFTTGQIGHLVYAGLAKLRRGGGYTKVFRVKITAAGRKAIAE
Ga0318516_102790423	3300031543	Soil	MATLSDEQLRALRFLARHPGGCTEATLLRQGFTAVQLGPLVYARLAKLRGTGRPKVFRVKITEAGQSAIAAGAD
Ga0318516_108122561	3300031543	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRPKVFRVKITAAGQRAIAAGVD
Ga0318541_104512681	3300031545	Soil	MATLSGEQLRALRFLARHPGGCTEATLLKQGFTAVQLGYLVYAGLAKLRGTGRPKVFRVKITEAGQRAIAAD
Ga0318528_104406041	3300031561	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRSKVFRVKITEAGRKAIAADAD
Ga0318528_105410671	3300031561	Soil	RALRFLALHPGGCTEATLLKQGFTAVQLGPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAE
Ga0310915_101067682	3300031573	Soil	MATLSEEQLRALRFLARHPGGCTEATLLKQGFTAVQLSQLVFAGLAKLRVVGRPKLFRVKITTAGQRAIAADAD
Ga0310915_103971402	3300031573	Soil	MATLSGEQLRALRFLARHPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRGTGRPKVFRVKITAAGRKAIAAGAD
Ga0310915_105999161	3300031573	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSYLVYAGLAKLRGESRPKVFRVKITEAGRKAIAAGAD
Ga0310915_106784511	3300031573	Soil	TLSDEQLRALRFLARHPGGCTEATLLRQGFTAVQLGPLVYAGLAKLRGTGRPKVFRVKITEAGQKAIAE
Ga0310915_111868121	3300031573	Soil	LSLSKGAREGRTRLSMATLSDEQPRALRFLARHPGCRTEATLLEQGFTAVQLGYLVYAGLAKLRGAGRPKMFRVKITAAGQRAIAE
Ga0318561_106115951	3300031679	Soil	MAALSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLGPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAE
Ga0318561_107597292	3300031679	Soil	ATLSDEQLRALRFLARHPHGCTEATLLKQGFTAVQLGPLVYAGFAKLRGAGRPKVFRVKITEAGQRAIAE
Ga0318572_105186751	3300031681	Soil	ATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRPKVFRVKITAAGQRAIAAGVD
Ga0318560_101134682	3300031682	Soil	MATLSGEQLRALRFLARHPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRGTGRPKVFRVKITEAGQSAIAAGAD
Ga0306917_102910493	3300031719	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRSKVFRVKITAAGQRAIAE
Ga0306917_105893262	3300031719	Soil	PQDRTMATLSDEQLRALRFLACHPGGCTEATLLKQGFTAVQLGQLVYAGLAKLRGESRPKVFRVKITAAGRKAIAAGVD
Ga0306917_106902411	3300031719	Soil	FLARHPGGCTEATLLRQGFTAVQLGPLVYARLAKLRGTGRPKVFRVKITEAGQSAIAAGA
Ga0306917_110173941	3300031719	Soil	MAALSDEQLRALRFLARHPGGCTEAVLLEQGFTTGQLGHLVHAGLAKLRGGASLTKVYRVKITAAGRKAIAE
Ga0306918_102104291	3300031744	Soil	TSPLPQDRTMATLSEEQLRALRFLARHPGGCTEATLLKQGFTAVQLSQLVFAGLAKLRVVGRPKLFRVKITTAGQRAIAADAD
Ga0306918_103630592	3300031744	Soil	ALRFLARHPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAADAD
Ga0318502_102134872	3300031747	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRAVGRPKLFRVKITMAGQRAIAAGAD
Ga0318535_103355191	3300031764	Soil	LRFLARHPGGCTEATLLEQGFTTRQLSQLVFTGLAKLRVVGRPKLFRVKITVVGRKAIAE
Ga0318546_111132971	3300031771	Soil	MATLSDEQLRALRFLARHPHGCTEATLLKQGFTAVQLGPLVYAGFAKLRGAGRPKVFRVK
Ga0318546_113345391	3300031771	Soil	KIPARDFLLPQDRAMATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLGYLVYAGLAKLRGTGRPKVFRVKITEAGQRAIAAD
Ga0318566_105845842	3300031779	Soil	RFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRPKVFRVKITEAGQSAIAAGAD
Ga0318547_110526841	3300031781	Soil	FLARHPGGCTEATLLKQGFAAVQLGPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAE
Ga0318523_104076191	3300031798	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRPKVFRVKITAAGQRAIA
Ga0318523_105026552	3300031798	Soil	SMAALSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLGPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAE
Ga0318497_104643372	3300031805	Soil	MATLSGEQLRALRFLARHPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRGTGRPKVFRVKITAAGRKAIAAGA
Ga0318497_108856551	3300031805	Soil	LRFLARHPGGCTEATLLEQGFTAVQLSQLVFTGLTKLRGESRPKVFRVKITEAGRNAIAVDAD
Ga0310917_102044331	3300031833	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSYLVYAGLAKLRGESRPKVFRVKITAVGQ
Ga0310917_102357201	3300031833	Soil	MATLSDEQLRALRFLARHPGGCTEATLLEQGFTAVQLSYLVYAGLAKLRGESRPKVFRVKITAVGQ
Ga0318512_104293672	3300031846	Soil	MATLSGEQLRALRFLARHPGGCTEATLLKQGFTAVQLVPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAE
Ga0318527_104861221	3300031859	Soil	MATLSGEQLRALRFLARHPGGCTEATLLKQGFTAAQPGPLVYAGLAKLRGTGRPKVFRVKITEAGQRAIAADAD
Ga0306919_100854081	3300031879	Soil	SLPETSPLPQDRTMATLSEEQLRALRFLARHPGGCTEATLLKQGFTAVQLSQLVFAGLAKLRVVGRPKLFRVKITTAGQRAIAADAD
Ga0306925_107333492	3300031890	Soil	MATLSDEQLRALRFLARHPGGCTEATLLRQGFTAVQLGPLVYAGLAKLRGTGRPKVFRVKITEAGQKAIAE
Ga0306925_107962551	3300031890	Soil	RTRLSMATLSDEQPRALRFLARHPGCRTEATLLEQGFTAVQLGYLVYAGLAKLRGAGRPKMFRVKITAAGQRAIAE
Ga0306925_110754872	3300031890	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRRAGRPKVFRVKITEAGQRAVAEEACSGCRHVPMI
Ga0306925_111236991	3300031890	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLGYLVYAGLAKLRGTGRPKVFRVKITEAGQRAIAAD
Ga0306925_118267862	3300031890	Soil	FLLPQDRTMATLNDEQLRALRFLARHPGGCTEATLLKQGFTTAQLGQLVYAGLAKLRGTGRSKVFRVKITEAGRKAIAE
Ga0306925_118884382	3300031890	Soil	MATLSDEQLRALRFLARHPGGCTEATLLEQGFTAVQLSPLVYAGLAKLRAVGRPKLFRVKITMAGQRAIAAGAD
Ga0318536_102287112	3300031893	Soil	MATLSEEQLRALRFLARHPGGCTEATLLKHGFTAVQLSQLVFAGLAKLRGAGRPKVITEAGQRAVAAGAD
Ga0318520_105711441	3300031897	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRPKVFRVKITEAGQSAIAAGAD
Ga0306923_103415243	3300031910	Soil	MATLSDEQLRALRFLARHPGGCTEATLLEHGFTAGQLGYLVYAGLAKLRGESRPKVFRVKITEAGRKAIAAGAD
Ga0306923_103874994	3300031910	Soil	SPLPQDRTMATLSEEQLRALRFLARHPGGCTEATLLKQGFTAVQLSQLVFAGLAKLRVVGRPKLFRVKITTAGQRAIAADAD
Ga0306923_106218802	3300031910	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLRPLVYAGLAKLRGAGRPKVFRVKITAAGQRAIAEDS
Ga0306923_109340332	3300031910	Soil	SDEQLRALRFLARHPGGCTEATLLGQGFTAGQLGYLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAADAD
Ga0306923_110772851	3300031910	Soil	MATLSDEQLRALRFLARHPGGFTEATLLKQGFTAVQLGYLVYAGLAKLRGESRPKVLRVKITAAGQRAIAAGVD
Ga0306923_125080401	3300031910	Soil	DEQLRALRFLARHPGGCTEAMLLRQGFTAVQLSPLVYAGLAKLRGTGRSKVFRVKITEAGRKAIAAEAD
Ga0306921_105268221	3300031912	Soil	LARHPGGCTEATLLRQGFTAVQLGPLVYARLAKLRGTGRPKVFRVKITEAGQSAIAAGAD
Ga0306921_106942181	3300031912	Soil	MATLSDEQIRALRFLARHPGGCTEATLLGQGFTAVQLSYLVYAGLAKLRGESRPKVFRVKITAAGQRAITAGVD
Ga0306921_107162932	3300031912	Soil	MATLSDEQLRALRFLARHPGGCTEAVLLEQGFTTGQLGHLVFEGLAKLRGGAGRTSPRFLRVKITEGGRKAIAE
Ga0306921_114767932	3300031912	Soil	MATLSDEQLRALRFLARHPGGCTEATLLRQGFTAVQLSPLVYAGLAKLRGTGRSKVFRVKITEAGRKAIAADAD
Ga0306921_119608591	3300031912	Soil	RTRLSMATLSDEQPRALRFLARHPGCRTEATLLEQGFTAVQLGYLVYAGLAKLRGAGRPKMFRVKIAEAGQRAIAE
Ga0310912_112799641	3300031941	Soil	MATLSEEQLRALRFLARHPGGCTEATLLKHGFTAVQLSQLVFAGLAKLRVVGRPKLFRVKITTAGQRAIAADAD
Ga0310916_113686911	3300031942	Soil	MATLSDEQLRALRFLARHPHGCTEATLLKQGFTAVQLGPLVYAGLAKLRGAGRPKVFRVKITE
Ga0310913_110679422	3300031945	Soil	ASAREGRARVSMATLSDEQLRALRFLARHPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRRAGRPKVFRVKITEAGQRAIAADAD
Ga0310910_109476881	3300031946	Soil	MATLSEEQLRALRFLARHPGGCTEATLLKHGFTAVQLSQLVFAGLAKLRVVGRPKLFRVKITT
Ga0310909_100851171	3300031947	Soil	KSLPETSPLPQDRTMATLSEEQLRALRFLARHPGGCTEATLLKQGFTAVQLSQLVFAGLAKLRVVGRPKLFRVKITTAGQRAIAADAD
Ga0310909_104656001	3300031947	Soil	RALRFLARHPGGFTEATLLKQGFTAVQLSQLVFAGPAKLRGESRPKVLRVKITAAGQRAIAAGVD
Ga0310909_110021312	3300031947	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRPKVFRVKITAAGQRAIAAGV
Ga0310909_116443571	3300031947	Soil	MATLSDEQLRALRFLARHPHGCTEATLLKQGFTAVQLGPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAE
Ga0306926_100421322	3300031954	Soil	MAALSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSYLVYAGLAKLRGESRPKVFRVKITEAGRKAIAAGAD
Ga0306926_102884111	3300031954	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRSKVFRVK
Ga0306926_116516512	3300031954	Soil	MATLSDEQLRALRFLARHPGGCTEAMLLRQGFTAVQLSPLVYAGLAKLRGTGRSKVFRVKITEAGRKAIAAEAD
Ga0318530_101659501	3300031959	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSQLVFAGLAKLRVVGRPKLFRVKITTAGQRAIAADAD
Ga0318569_105811321	3300032010	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLGPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAE
Ga0318558_101722692	3300032044	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSPLVYAGLAKLRGTGRPKVFRVKITEAGQRAIAADAD
Ga0318575_102535861	3300032055	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLRPLVYAGLAKLRGAGRPKVFRVKITEAGQRAIAADAD
Ga0318533_103842551	3300032059	Soil	SRCRKIEQMATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSYLVYAGLAKLRGESRPKVFRVKITEAGRKAIAAGAD
Ga0306920_1006828672	3300032261	Soil	MATLSDEQLRALRFLARHPGGCTEATLLKQGFTAVQLSYLVYAGLAKLRGESRPKVLRVKITAAGQRAIAAGVD
Ga0306920_1011749923	3300032261	Soil	MATLNDEHLRALRFLARHPRGCTEGRLLKQGFTTGQIGYLVSAGLAKLRGESRPKVFRVKITTAGRKAITE
Ga0306920_1015244602	3300032261	Soil	MATLSGEQLRALRFLARHPGGCTEATLLKQGFTAAQLGPLVYAGLAKLRGTGRPKVFRVKITAAGRKAIAAGVD
Ga0306920_1019703131	3300032261	Soil	MATLTDEHLRALRFLAGRPGGCTEARLLEQGFTTGQLGHLVHAGLAKLRGGASLTKVYRVKITAAGR
Ga0306920_1021099242	3300032261	Soil	MATLSDEQLRALRFLARHPGGFTEAMLLRQGFTAVQLSPLVYAGLAKLRGTGRSKVFRVKITAAGRKAIATEAD
Ga0306920_1021462862	3300032261	Soil	FLARHPGGCTEATLLKQGFTAVQLGYLVYAGLAKLRGTGRPKVFRVKITEAGQRAIAAD
Ga0306920_1037199551	3300032261	Soil	IARLPELLGKGERDWTMAVLSDEQLRALRFLAQHPGGCTEATLLKQGFTAGQLSQLVFTGLAKLRGESRPKVFRVKITVAGRKAIAE
Ga0310914_112235222	3300033289	Soil	VNTAPLTDEQLRALHILARHPRGAAEAKLLEQGFTAGQLSPLVIAGLVNLRRGGRPTVLRVKITTAGRKAIAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076412

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences