Metagenome / Metatranscriptome Family F076405

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076405
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	59 residues
Representative Sequence	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSDRSLEKIGDVEMPRLAQVPSGLLS
Number of Associated Samples	95
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.81 %
% of genes near scaffold ends (potentially truncated)	25.42 %
% of genes from short scaffolds (< 2000 bps)	79.66 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.475 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.186 % of family members)
Environment Ontology (ENVO)	Unclassified (23.729 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.339 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.77% β-sheet: 0.00% Coil/Unstructured: 60.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01548	DEDD_Tnp_IS110	3.39
PF00072	Response_reg	2.54
PF00196	GerE	1.69
PF13545	HTH_Crp_2	1.69
PF00589	Phage_integrase	1.69
PF07730	HisKA_3	1.69
PF04185	Phosphoesterase	1.69
PF10531	SLBB	0.85
PF11999	Ice_binding	0.85
PF13177	DNA_pol3_delta2	0.85
PF01740	STAS	0.85
PF04203	Sortase	0.85
PF05227	CHASE3	0.85
PF00144	Beta-lactamase	0.85
PF13560	HTH_31	0.85
PF07883	Cupin_2	0.85
PF13231	PMT_2	0.85
PF13205	Big_5	0.85
PF04397	LytTR	0.85
PF11154	DUF2934	0.85
PF04986	Y2_Tnp	0.85
PF05050	Methyltransf_21	0.85
PF13302	Acetyltransf_3	0.85
PF05598	DUF772	0.85
PF07228	SpoIIE	0.85
PF06764	DUF1223	0.85
PF03551	PadR	0.85
PF13548	DUF4126	0.85
PF01555	N6_N4_Mtase	0.85
PF05532	CsbD	0.85
PF13088	BNR_2	0.85
PF13408	Zn_ribbon_recom	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	3.39
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.69
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.69
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.69
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.69
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.69
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.85
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.85
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.85
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.85
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.85
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.85
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.85
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.85
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.47 %
Unclassified	root	N/A	41.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.47 %
Unclassified	root	N/A	41.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.47 %
Unclassified	root	N/A	41.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.02 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.32 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.85 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.78 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	2.54 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.17 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2.54 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.69 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.85 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.17 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2.54 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.69 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.17 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2.54 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.69 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.85 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.85 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101262131	Not Available	744	Open in IMG/M
3300001593\|JGI12635J15846_10321405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	960	Open in IMG/M
3300002245\|JGIcombinedJ26739_100272977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1577	Open in IMG/M
3300004091\|Ga0062387_101575206	Not Available	529	Open in IMG/M
3300004152\|Ga0062386_101424395	Not Available	577	Open in IMG/M
3300005542\|Ga0070732_10247428	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005602\|Ga0070762_10501717	Not Available	795	Open in IMG/M
3300005712\|Ga0070764_10975345	Not Available	533	Open in IMG/M
3300005921\|Ga0070766_11134632	Not Available	540	Open in IMG/M
3300005944\|Ga0066788_10017870	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300005944\|Ga0066788_10179974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300005950\|Ga0066787_10029857	All Organisms → cellular organisms → Bacteria → Acidobacteria	979	Open in IMG/M
3300005995\|Ga0066790_10409293	Not Available	580	Open in IMG/M
3300005995\|Ga0066790_10412686	Not Available	577	Open in IMG/M
3300005995\|Ga0066790_10514886	Not Available	511	Open in IMG/M
3300006052\|Ga0075029_100110696	All Organisms → cellular organisms → Bacteria → Acidobacteria	1657	Open in IMG/M
3300006059\|Ga0075017_100329256	All Organisms → cellular organisms → Bacteria → Acidobacteria	1134	Open in IMG/M
3300006059\|Ga0075017_101259444	Not Available	580	Open in IMG/M
3300006102\|Ga0075015_100234411	All Organisms → cellular organisms → Bacteria → Acidobacteria	989	Open in IMG/M
3300006173\|Ga0070716_101007899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300006175\|Ga0070712_100541202	Not Available	980	Open in IMG/M
3300006642\|Ga0075521_10581927	Not Available	551	Open in IMG/M
3300009522\|Ga0116218_1343839	Not Available	667	Open in IMG/M
3300009665\|Ga0116135_1065304	Not Available	1280	Open in IMG/M
3300009700\|Ga0116217_10109263	All Organisms → cellular organisms → Bacteria	1884	Open in IMG/M
3300010379\|Ga0136449_100311348	All Organisms → cellular organisms → Bacteria	2861	Open in IMG/M
3300010379\|Ga0136449_100622906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1832	Open in IMG/M
3300011120\|Ga0150983_13218584	Not Available	638	Open in IMG/M
3300011120\|Ga0150983_15486882	Not Available	693	Open in IMG/M
3300011120\|Ga0150983_16410021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1975	Open in IMG/M
3300012208\|Ga0137376_10841958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	789	Open in IMG/M
3300012957\|Ga0164303_10139241	Not Available	1267	Open in IMG/M
3300012984\|Ga0164309_10405505	Not Available	1018	Open in IMG/M
3300012986\|Ga0164304_11039892	Not Available	651	Open in IMG/M
3300012988\|Ga0164306_11009785	Not Available	686	Open in IMG/M
3300012989\|Ga0164305_12085100	Not Available	519	Open in IMG/M
3300014169\|Ga0181531_10778496	Not Available	596	Open in IMG/M
3300014201\|Ga0181537_10220325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1304	Open in IMG/M
3300014495\|Ga0182015_10000564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	53226	Open in IMG/M
3300014498\|Ga0182019_10335099	Not Available	1017	Open in IMG/M
3300014501\|Ga0182024_10109498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3989	Open in IMG/M
3300014501\|Ga0182024_10461152	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300014501\|Ga0182024_10715074	Not Available	1234	Open in IMG/M
3300015082\|Ga0167662_1022024	Not Available	814	Open in IMG/M
3300017946\|Ga0187879_10069680	Not Available	2044	Open in IMG/M
3300018008\|Ga0187888_1027272	All Organisms → cellular organisms → Bacteria → Acidobacteria	2884	Open in IMG/M
3300018019\|Ga0187874_10142845	Not Available	1017	Open in IMG/M
3300018022\|Ga0187864_10266398	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300018034\|Ga0187863_10271225	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300018035\|Ga0187875_10092350	All Organisms → cellular organisms → Bacteria	1727	Open in IMG/M
3300020579\|Ga0210407_10000083	All Organisms → cellular organisms → Bacteria	125319	Open in IMG/M
3300020579\|Ga0210407_10028864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4124	Open in IMG/M
3300020579\|Ga0210407_10185191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1615	Open in IMG/M
3300020580\|Ga0210403_10006838	All Organisms → cellular organisms → Bacteria	9539	Open in IMG/M
3300020580\|Ga0210403_10015161	All Organisms → cellular organisms → Bacteria	6196	Open in IMG/M
3300020580\|Ga0210403_10020515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	5272	Open in IMG/M
3300020581\|Ga0210399_10097073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2407	Open in IMG/M
3300020581\|Ga0210399_10714242	Not Available	823	Open in IMG/M
3300020582\|Ga0210395_10098742	All Organisms → cellular organisms → Bacteria → Acidobacteria	2160	Open in IMG/M
3300021178\|Ga0210408_10224559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1495	Open in IMG/M
3300021180\|Ga0210396_10113030	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300021181\|Ga0210388_10043728	Not Available	3720	Open in IMG/M
3300021181\|Ga0210388_10508157	Not Available	1057	Open in IMG/M
3300021401\|Ga0210393_10305650	All Organisms → cellular organisms → Bacteria → Acidobacteria	1292	Open in IMG/M
3300021404\|Ga0210389_10150767	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300021406\|Ga0210386_10152356	All Organisms → cellular organisms → Bacteria → Acidobacteria	1934	Open in IMG/M
3300021407\|Ga0210383_11116995	Not Available	665	Open in IMG/M
3300021420\|Ga0210394_10000489	All Organisms → cellular organisms → Bacteria → Acidobacteria	83148	Open in IMG/M
3300021477\|Ga0210398_10727809	All Organisms → cellular organisms → Bacteria → Terrabacteria group	802	Open in IMG/M
3300021478\|Ga0210402_10253558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1625	Open in IMG/M
3300021478\|Ga0210402_10568036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300021478\|Ga0210402_11031769	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300021478\|Ga0210402_11349302	Not Available	640	Open in IMG/M
3300021559\|Ga0210409_10020135	All Organisms → cellular organisms → Bacteria	6500	Open in IMG/M
3300022840\|Ga0224549_1060745	Not Available	516	Open in IMG/M
3300025906\|Ga0207699_11199744	Not Available	562	Open in IMG/M
3300026214\|Ga0209838_1017819	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300026281\|Ga0209863_10255359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	501	Open in IMG/M
3300027505\|Ga0209218_1138398	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300027545\|Ga0209008_1135298	Not Available	544	Open in IMG/M
3300027575\|Ga0209525_1002305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4236	Open in IMG/M
3300027727\|Ga0209328_10027628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	1744	Open in IMG/M
3300027745\|Ga0209908_10026567	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300027884\|Ga0209275_10414329	Not Available	761	Open in IMG/M
3300027905\|Ga0209415_10350787	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300027908\|Ga0209006_10909147	Not Available	706	Open in IMG/M
3300028047\|Ga0209526_10291625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1106	Open in IMG/M
3300028556\|Ga0265337_1159624	Not Available	611	Open in IMG/M
3300028646\|Ga0302159_10128744	Not Available	578	Open in IMG/M
3300028759\|Ga0302224_10192398	Not Available	807	Open in IMG/M
3300028780\|Ga0302225_10233868	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300028800\|Ga0265338_10056795	All Organisms → cellular organisms → Bacteria → Acidobacteria	3467	Open in IMG/M
3300028868\|Ga0302163_10062530	Not Available	899	Open in IMG/M
3300029636\|Ga0222749_10012943	All Organisms → cellular organisms → Bacteria → Acidobacteria	3379	Open in IMG/M
3300029923\|Ga0311347_10673208	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300029990\|Ga0311336_10209189	All Organisms → cellular organisms → Bacteria → Acidobacteria	1593	Open in IMG/M
3300029990\|Ga0311336_10258453	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300029999\|Ga0311339_11717858	Not Available	549	Open in IMG/M
3300030002\|Ga0311350_10088889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2708	Open in IMG/M
3300030943\|Ga0311366_10107868	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300030943\|Ga0311366_10524011	All Organisms → cellular organisms → Bacteria → Acidobacteria	1031	Open in IMG/M
3300031057\|Ga0170834_111231368	All Organisms → cellular organisms → Bacteria → Acidobacteria	3010	Open in IMG/M
3300031090\|Ga0265760_10016481	All Organisms → cellular organisms → Bacteria → Acidobacteria	2121	Open in IMG/M
3300031122\|Ga0170822_16406136	Not Available	582	Open in IMG/M
3300031184\|Ga0307499_10044258	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300031231\|Ga0170824_112407033	Not Available	536	Open in IMG/M
3300031231\|Ga0170824_116076128	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300031234\|Ga0302325_13324564	Not Available	509	Open in IMG/M
3300031240\|Ga0265320_10537386	Not Available	517	Open in IMG/M
3300031261\|Ga0302140_10712974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	731	Open in IMG/M
3300031469\|Ga0170819_11115639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300031902\|Ga0302322_100089371	All Organisms → cellular organisms → Bacteria	3175	Open in IMG/M
3300031902\|Ga0302322_100817972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1112	Open in IMG/M
3300031918\|Ga0311367_11574458	Not Available	643	Open in IMG/M
3300032160\|Ga0311301_10449323	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300032160\|Ga0311301_10847856	Not Available	1243	Open in IMG/M
3300034124\|Ga0370483_0066591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300034282\|Ga0370492_0266177	Not Available	696	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.46%
Host-Associated	Host-Associated	2.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.75%
Aquatic	Environmental → Aquatic	12.71%
Plants	Host-Associated → Plants	2.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.34%
Peat	Environmental → Terrestrial → Peat	14.41%
Freshwater	Environmental → Aquatic → Freshwater	9.32%
Sediment	Environmental → Aquatic → Sediment	3.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.53%
Loam	Environmental → Terrestrial → Soil → Loam	15.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.32%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	9.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	5.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.24%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.39%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.39%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.69%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015082	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11c, vegetated hydrological feature)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1012621312	3300000364	Soil	MSLSEDVRPLLAARAATDPNAARLLEMFTKADEILSEGLLERTGDVAMPMLAQVPSGLLS
JGI12635J15846_103214052	3300001593	Forest Soil	MILGAGDRNVSLSDKVLPLLAARAATDPNAARLLEMFTRADEISSEHPPERIGDVEIPKL
JGIcombinedJ26739_1002729772	3300002245	Forest Soil	MYLSNDIRFLLAARAATDPHAARLLEMFTKADEILNEHSLERIGNVGMPKLVQVSSVLLSASAFHSQP*
Ga0062387_1015752062	3300004091	Bog Forest Soil	MSLSEDVRPLLAARAATDPNAARLLEMFTKADEILSEQSLERTWDVEVPRLAQVLSELLS
Ga0062386_1014243951	3300004152	Bog Forest Soil	MSLSENVRPLLAARAATDPNAARLLEMFTRADRILSERSRDQIEDVEMPSRATAL
Ga0070732_102474282	3300005542	Surface Soil	MSLSEDVRPLLAARAATDPNASRLLEMFTRADEILSKHSLERSGDAEMPRLAQVPSGLLS
Ga0070762_105017171	3300005602	Soil	MSLSENVRPLLAARAATDPNAARLLEMFTKADEILSEHSLGGIGDLEMPGAQVASGLLS*
Ga0070764_109753451	3300005712	Soil	MSLSEDVRPLLAARASTDPDAARLLEMFTNADEIVSEHSLERIGDVEIPGLAQVP
Ga0070766_111346321	3300005921	Soil	VGEDKTMSLSEDVRLLLSSRAATDPSAARLLEMFTKADEILREHSVERIGNRLQQLPSRF
Ga0066788_100178701	3300005944	Soil	MTLGAGDRTVSLSDELLPLLAARAVTDPDAARLLEIFTRADEISSEHSPERISDVEIPKL
Ga0066788_101799741	3300005944	Soil	EGDKTMSLSEDVRSLLAARAATDPNASRLLEMFTRADEVLSESSPVRTGNVKIPIEIASRVHY*
Ga0066787_100298571	3300005950	Soil	MSLSDALLPLLAARAVTDPDAARLLEIFTRADEISSKHPPERISDVEIPKL*
Ga0066790_104092932	3300005995	Soil	MSLSEDVRPLLAARAATDPNAARLLEMFTKADEILSERSLDGDRGLEMLRTQVPSGLLL*
Ga0066790_104126861	3300005995	Soil	MTPKLGGGDKTMSLSEDIRPLLAARAATDPSAARLLEMFTNADEILSEHSLERIGDVEMPKL*
Ga0066790_105148862	3300005995	Soil	TILPECVITLTMTLGAGDRTVSLSDELLPLLAARAVTDPDAARLLEIFTRADEISSEHSPERISDVEIPKL*
Ga0075029_1001106961	3300006052	Watersheds	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKIGDVEVPRLAQEPSGLLS
Ga0075017_1003292561	3300006059	Watersheds	SEDVRPLLAARAAIDPKAARLLEVFTRADEILSQRSLEGIDDLEMPRAQIPSRLLS*
Ga0075017_1012594442	3300006059	Watersheds	MSLSEDVRRLLVARAPTDPNAARLLEMFTKADEILSERSLERIGDVGIPRLAQVPSGLLS
Ga0075015_1002344112	3300006102	Watersheds	ENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKIGDVEVPRLAQEPSGLLS*
Ga0070716_1010078991	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPEDVRPLLAARAATDPNAAKLLEMFTKADEILSERPLERIGNAEMQPSRLLS*
Ga0070712_1005412021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSDRSLEKIGDVETPRLAQVPSGSLS
Ga0075521_105819271	3300006642	Arctic Peat Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLKKIGDVEMPRLAPVPAGLLS
Ga0116218_13438392	3300009522	Peatlands Soil	MSLSEDVRPLLAARAATDPNAAKLLEMFTKADEILSERSLEWIGDLEMPRAQVPSGSLS*
Ga0116135_10653042	3300009665	Peatland	MSLSEDVRPLLAARAATDPNAVRLLEMFARADKTLSEHSLERIGDNEMPKLAREPSGLLS
Ga0116217_101092632	3300009700	Peatlands Soil	MSLSENVRPLLAARAATDPNAARLLEVFTRADGMLSERSRDQIEDVEMPRVAQVPS*
Ga0136449_1003113484	3300010379	Peatlands Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSQRSLEKIGNVEMPRLAQVPSGLLS
Ga0136449_1006229063	3300010379	Peatlands Soil	MSLSENVRPLLAARAATDPNAARLLEMFTRADGMLSERSRDQIEDVEMPRVAQVPS*
Ga0150983_132185842	3300011120	Forest Soil	ENVRPLLAARAATDLNAARLLEMFTKADEMLSERSQEQIGNVETLRVAQVPSELLS*
Ga0150983_154868821	3300011120	Forest Soil	TMSFSGGVRLLLAARAASDPAAATLLEMFTKADAILSEQSPERIADVETPKL*
Ga0150983_164100211	3300011120	Forest Soil	VSLSEDVRPLLAARAPTDPNAAGLLEMFVKADEIVSEYWLERIGDGEMP
Ga0137376_108419582	3300012208	Vadose Zone Soil	AARAATDPNAARLLEMFAKADEILSERSLEKIGDVEMPRLAPVPSGLLS*
Ga0164303_101392411	3300012957	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKTGDVEMPR
Ga0164309_104055052	3300012984	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSDRSLEKIGDVEMPRLAQVPSGLLS
Ga0164304_110398922	3300012986	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKIGDVEMPRLAQEL*
Ga0164306_110097851	3300012988	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKTGDVEMPRL
Ga0164305_120851001	3300012989	Soil	MSLSENVRPLLAARAATDPNAARLLEIFTKADEGLGDYSLEGIGDPQMPRVQVPQGV*
Ga0181531_107784961	3300014169	Bog	MSVFGNIRPMLAARAATDPNAAKLLEMFTTADEIVSERSPEQIGNVETSRLAQVSSRLLS
Ga0181537_102203251	3300014201	Bog	MSLSEDVRPLLAARASTDPHAARLLEMFAKADEIVSEHPQVLIGDFEMFGLAQVPTDRRRN*
Ga0182015_100005644	3300014495	Palsa	MSLSENVRPLLAARAATDPNAAKLLEMFTRADETLSERSLEQIGDVEIPRLALQRNLYRGGR*
Ga0182019_103350993	3300014498	Fen	MDLGAGDRTVSLSDELLQLLSARAPTDPDAARLLEMFTRADEISSEHPPERVGDVEIPKV
Ga0182024_101094985	3300014501	Permafrost	MLPECVITLTMTLGAGGRTVSSSDKVLPMLAARAVTDPNAARLLEMFTRAAEISSEHPPERISDVEIPKL*
Ga0182024_104611522	3300014501	Permafrost	MSLSENVRPLLASRAATDPNAARLLEMFTRADETLSERSLEQIGDVEIPRLALQRNLYRGGR*
Ga0182024_107150741	3300014501	Permafrost	MSLSEDVRPLLAARAATDPNAARLLEMFRKADEILSEGSLEGIEDREMRRPKVPSGLLS*
Ga0167662_10220241	3300015082	Glacier Forefield Soil	GAGDRTVSLSDELLPLLAARAPTDPDAARLLEMFTRADEISSEHPPERVGDVEIPKL*
Ga0187879_100696803	3300017946	Peatland	MSLSEDVRPLLAARAATDPNAARLLEMFARADKTLSEHSLERIGDNEMPKLAREPSGLLS
Ga0187888_10272722	3300018008	Peatland	MSLSEDVRPLLAARAATDPNAASLLAMFTKADEILSERSLEWIGDLEMPRAQVPSGSLL
Ga0187874_101428452	3300018019	Peatland	MSLSENIRPLLAARAATDPNAARLLEMFAKADEILSERALEKIGDVEMPRLAQAPWDLS
Ga0187864_102663982	3300018022	Peatland	MSSSENVRPLLAARAATDPNAARLLEMFTKADEILSERSLEQIGDVEMPRLAQAPWDLS
Ga0187863_102712251	3300018034	Peatland	MSLSKSIRPLLAARAATDPNAATLLEMFTRADEILSERSREQIGAVEMPRVSQGPSGLLS
Ga0187875_100923502	3300018035	Peatland	MSLSEDVRPLLAARAATDPNAARLLEMFARADKTLSEHSLERIGDNEMPKLAREPSGMLS
Ga0210407_10000083103	3300020579	Soil	MPLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKIVDVERPRLA
Ga0210407_100288643	3300020579	Soil	MTLSEDVRTLLAARAPTDPNAARLLETFAKADEIMSVYSPERIGDVEMPRLAQVSSGLRS
Ga0210407_101851913	3300020579	Soil	MSFSGGVRLLLAARAASDPAAATLLEMFTKADAILSEQSPERIADVETPKL
Ga0210403_100068387	3300020580	Soil	MSLSDVRPLLAARAPTDPNAARLLEIFAKADEIVSEYSLERIGDVEMPRLAQVPPALPS
Ga0210403_100151612	3300020580	Soil	MSLSENVRPLLAARAATDPKAARLLEMFAKADEILSERSLEKIVDVEMPRLVQVPSALLS
Ga0210403_100205152	3300020580	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSEGSLEKIVDVERPRLAQAPSGLLS
Ga0210399_100970735	3300020581	Soil	VSLSEDVRPLLAARAPTDPNAAGLLEMFVKADEIVSEYWLERIGDGEMPRLAQVPSGLRS
Ga0210399_107142421	3300020581	Soil	MSDVRPLLAARAATDPNAARLLEIFTKVDEILSERSLERIETVEIPKLAQVSSGSLS
Ga0210395_100987423	3300020582	Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSEGSLEKIVDVERPRLAQVPSGLLS
Ga0210408_102245593	3300021178	Soil	MILGTGDRTVSLSDELLPLLAARAATDPDAARLLEMFTRAAEISSKHPPERIGDVEIPKL
Ga0210396_101130303	3300021180	Soil	MPLSENVRPLLAARAATDPNAARLLEMFTKADEILSERSLEKIVDVERPRLA
Ga0210388_100437284	3300021181	Soil	MSLSENVRRLLAARAATDPNAARLLEMFAKADEILSERSLERIRTVEIPGFAQKSSGSLS
Ga0210388_105081571	3300021181	Soil	MSLSEDVRPLLVARAATDPNAARLLEMFAKADAILSEHSLVRIGDVEMPKLARVSSGLLS
Ga0210393_103056502	3300021401	Soil	MSSDNVRPLLAVCAATDPNAAKLLEMLTNADEIVSERSLEQIGDVEPPRLVQVP
Ga0210389_101507672	3300021404	Soil	MYLSNDIRFLLAARAATDPHAARLLEMFTKADEILNEHSLERIGNVGMPKLVQVSSVLLSASAFHSQP
Ga0210386_101523565	3300021406	Soil	MSLSEDVRPLLAARASTDPDAARLLEMFTNADEIVSEHSLERIGDVEIPGLAQVPSGLLS
Ga0210383_111169952	3300021407	Soil	MSLSEAVRPLLTARAPTDPNAARLLEMFAKADEIVSEYLPERIGDVEIPRLTSAPRDCSR
Ga0210394_1000048950	3300021420	Soil	MSLSEEVRPLLTARAATDSDAARLLEIFTKADEILSELSRERIGDVETSGPVQVISGLLS
Ga0210398_107278093	3300021477	Soil	SENVRPLLAARAATDPNAARLLEMFTKADEILSERSLEKIVDVERPRLA
Ga0210402_102535582	3300021478	Soil	MSLSENVRPLLAARAASDPNAARLLEMFTKADEILSERSLEKIGDVEMPRLAQLPSGLLS
Ga0210402_105680362	3300021478	Soil	MSLSEDVRPLLAARAATDPNAARLLEMFTRADEILSEHSLEPIGDFEMSRLAQVPSELLS
Ga0210402_110317692	3300021478	Soil	MPLSIDVRPLLTARAAIDPNAARLLEMFTKADEILSEHSLERIGDVEIPGLAQTHSGVLS
Ga0210402_113493021	3300021478	Soil	MSLSEDVRPLLAARAATDPNAARLLEMFTKADEILSERSLEGIGDLEMPRAQVPS
Ga0210409_1002013513	3300021559	Soil	VSLSDELLPLLAVRAATDPDAARLLEKFTRAAEISSKHPPERIGDVEIPKL
Ga0224549_10607452	3300022840	Soil	DVRPLLAARAATDPSAARLLEMFTKADEILSEHSLERIGDVEMPKTARMSSGLLL
Ga0207699_111997442	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKTGDVEMPRLAQVPSGLLS
Ga0209838_10178192	3300026214	Soil	MSLSDALLPLLAARAVTDPDAARLLEIFTRADEISSKHPPERISDVEIPKL
Ga0209863_102553592	3300026281	Prmafrost Soil	VSLSDELLPLLAARAVTDPDAARLLEIFTRADEISSEHSPERISDVEIPKL
Ga0209218_11383982	3300027505	Forest Soil	MSLSEDVRPLLAARAATDPDAARLLEMFTEADEILSEHSLERIGDIEMP
Ga0209008_11352981	3300027545	Forest Soil	MSLSEDVRPLLAARVANDPNAARLLEMFTEADESVSSYSPARIEDVEVPKLAHVLSEKMS
Ga0209525_10023055	3300027575	Forest Soil	MSLSEDVRPLLAARVANDPNAARLLEMFTEADESVSSYSPARIEDVEVPKLAHVLSEKLS
Ga0209328_100276282	3300027727	Forest Soil	VSLSDKVLPLLAARAATDPNAARLLEMFTRADEISSEHPPERIGDVEIPKL
Ga0209908_100265673	3300027745	Thawing Permafrost	MSLSEDVRPLLAARAATDPSAARLLEMFTKADEILSEHSLERIGDVEMPKTCLLYTSRCV
Ga0209275_104143291	3300027884	Soil	MSLSENVRPLLAARAATDPNAARLLEMFTKADEILSEHSLGGIGDLEMPGAQVASGLLS
Ga0209415_103507871	3300027905	Peatlands Soil	LGAGDKTMSSTEEVRSLLAARAATDPDAARLLEMFTKADEVLGDYSPNGIGDPQMPRVQVPSGI
Ga0209006_109091471	3300027908	Forest Soil	MSLSENVRPLLAARAAADPNAARLLEMFAKADEIVSEYSPERVGDVEVPRLAQAPSSGFR
Ga0209526_102916251	3300028047	Forest Soil	RQRQVGRVPTPMLAARAATDPNAARLLEMFTRADEISSEHPPERIGDVEIPKL
Ga0265337_11596241	3300028556	Rhizosphere	MSLSENVRPLLAARAPTDPNAARLLEMFAKADEILSERSLGKIGDTEKPRLAQVPSGLLS
Ga0302159_101287441	3300028646	Fen	MSLSVEVRPMLAARAAADPNAARLLEMFRNADEVLNGRSPVQIGDVEMPRLAQVPSKSLSEYLVQHQLS
Ga0302224_101923981	3300028759	Palsa	MSLPEDVRPLLAARAATDPSAARLLEMFTKADEILSEHSIERIGDVEMPRLAQVPSRLLL
Ga0302225_102338682	3300028780	Palsa	LPEDVRPLLAARAATDPSAARLLEMFTKADEILSEHSIERIGDVEMPRLAQVPSRLLL
Ga0265338_100567953	3300028800	Rhizosphere	MSLSENVRPLLAARAPTDPNAARLLEIFAKADEILSERSLGKIGDTEKPRLAQVPSGLLS
Ga0302163_100625302	3300028868	Fen	MSLSVDVRPMLAARPAADPNAARLLEMFRNADEVLNGRSPVQIGDVEMPRLAQVPSKSLSEYLVQHQLS
Ga0222749_100129432	3300029636	Soil	MSLSEDVRPLLAARAATDPNAARLLEIFTKADEILSERSLEGIRDLEMPRAQVPSGLLS
Ga0311347_106732081	3300029923	Fen	MPLSEDVRPLLVARAATDPSAARLLQMFKKADEIVSEHSKERIVDVPMPRLAPVPSGLLS
Ga0311336_102091891	3300029990	Fen	MPLSEDVRPLLVARAATDPNAARLLQMFKKADEIVSEHSKERIVAVPLPRLAPVPSGSYPRVPNAHFTNNR
Ga0311336_102584532	3300029990	Fen	MSLSENVRSLLAARAATDPNAARLLEMFAKADEILSERSLEKIGDVEMPRLAQVPSGLLS
Ga0311339_117178582	3300029999	Palsa	MSLSEDVRPLLAARAATDPSAARLLEMFTKADEILSEHSLERIGDVEMPKTARMSSGLLL
Ga0311350_100888891	3300030002	Fen	MSLSVNVRPMLAARAAADPNAARLLEMFRNADEVLNGRSPVQIGDVEMPRLAQVPSKSLSEYLVQHQLS
Ga0311366_101078681	3300030943	Fen	SEDVRPLLVARAATDPNAARLLQMFKKADEIVSEHSKERIVDVPLPRLAPVPSGFLS
Ga0311366_105240113	3300030943	Fen	MPLSEDVRPLLVARAATDPNAARLLQMFKKADEIVSEHSKERIVAVPLPRLA
Ga0170834_1112313682	3300031057	Forest Soil	MSLSENVRPLLAARAATDPDAARLLEMFAKADEILSERSLEKIGDVEMPRLAQVRPPSCSFETFRPAAGIM
Ga0265760_100164814	3300031090	Soil	MSSSEDVRPLLAARAATDPNAARLLKMFKKADEVLGDYSLKAIGDPQMPRVQAPSGV
Ga0170822_164061361	3300031122	Forest Soil	MSLSENVRPLLAARAATDPDAARLLEMFAKADEILSERSLEKIGDVEMPRLAQVRPPSCSFETF
Ga0307499_100442582	3300031184	Soil	MSLYEDVRPLLATRAATDPNAARLLEMFTKADEILGDYSLKGIGDPQMPRVQVPSGV
Ga0170824_1124070332	3300031231	Forest Soil	MSLSESVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKGGGDVEMPRLVQVPSGPRDCS
Ga0170824_1160761281	3300031231	Forest Soil	MSLSENVRPLVAARAATHPNAARLLEMFAKSDEILSEPSLEKIGDVEMPRLVQVPSGLS
Ga0302325_133245641	3300031234	Palsa	MSLSEDVRPLLAARAATDPSAARLLEMFTKADEILSEHSLERVGDVEMPRPAQVPSGFLL
Ga0265320_105373861	3300031240	Rhizosphere	MTLVAGDRTVSSSDKVLPLLAARAATDPDAVKLLEMFTRAAEISSEHPPERIGDVEITKL
Ga0302140_107129741	3300031261	Bog	MPLSEDVRPLLAARAATDPDAARLLEMFTKADEILSERSLEGIGNVEMPGLSQVSSLRRA
Ga0170819_111156392	3300031469	Forest Soil	MSLSENVRPLLAARAATDPNAARLLEMFAKADEILSERSLEKGGGDVEMPRLVQVPSGPRDCSWK
Ga0302322_1000893711	3300031902	Fen	MSLSVDVRPMLAARPAADPNAARLLEMFRNADEVLNGRSPVQIGDVGMPRLAQVPSKSLSEYLVQHQLS
Ga0302322_1008179723	3300031902	Fen	LSENVRSLLAARAATDPNAARLLEMFAKADEILSERSLEKIGDVEMPRLAQVPSGLLS
Ga0311367_115744582	3300031918	Fen	PMLAARPAADPNAARLLEMFRNADEVLNGRSPVQIGDVGMPRLAQVPSKSLSEYLVQHQL
Ga0311301_104493233	3300032160	Peatlands Soil	MSLSENVRPLLAARAATDPNAARLLEMFTRADGMLSERSRDQIEDVEMPRVAQVPS
Ga0311301_108478561	3300032160	Peatlands Soil	MSLSEDVRPLLAARAATDPNAAKLLEMFTKADEILSERSLEWIGDLEMPRAQVPSGSLS
Ga0370483_0066591_360_542	3300034124	Untreated Peat Soil	MSLSENVRPLLAARAATDPSAASLLEMFTRADEILSESSLKQIEDAEMLRLTQVPSGLLL
Ga0370492_0266177_1_177	3300034282	Untreated Peat Soil	MSLSENVRPLLAARAATDPSAASLLEMFTRADEILSESSLKQIEDAEMLRLTQVPSGLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076405

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences