Metagenome / Metatranscriptome Family F076403

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076403
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	61 residues
Representative Sequence	ADLSRFVGTTVQAAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIAGEELRRLGYAL
Number of Associated Samples	100
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.15 %
% of genes from short scaffolds (< 2000 bps)	94.07 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.186 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (14.407 % of family members)
Environment Ontology (ENVO)	Unclassified (23.729 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.983 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00005	ABC_tran	48.31
PF00440	TetR_N	5.93
PF00664	ABC_membrane	4.24
PF03881	Fructosamin_kin	4.24
PF00133	tRNA-synt_1	1.69
PF12848	ABC_tran_Xtn	1.69

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG3001	Fructosamine-3-kinase	Carbohydrate transport and metabolism [G]	4.24
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.69
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.69
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.69
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.19 %
Unclassified	root	N/A	28.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.19 %
Unclassified	root	N/A	28.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.19 %
Unclassified	root	N/A	28.81 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.71 %
Unclassified	root	N/A	28.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	59.32 %
Unclassified	root	N/A	28.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.81 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	12.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.39 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.81 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	10.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.39 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.81 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	9.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.39 %
Marinactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora	0.85 %
Kibdelosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium	0.85 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.39 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1.69 %
Actinomadura flavalba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba	1.69 %
Actinomadura rifamycini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rifamycini	0.85 %
Marinactinospora thermotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	0.85 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	0.85 %
Thermomonospora echinospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_101459918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	868	Open in IMG/M
3300005336\|Ga0070680_100173993	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300005367\|Ga0070667_100526972	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300005434\|Ga0070709_11141251	Not Available	624	Open in IMG/M
3300005434\|Ga0070709_11205049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba	608	Open in IMG/M
3300005435\|Ga0070714_100703034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	975	Open in IMG/M
3300005435\|Ga0070714_101466214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	666	Open in IMG/M
3300005435\|Ga0070714_101638718	Not Available	628	Open in IMG/M
3300005436\|Ga0070713_100304752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1467	Open in IMG/M
3300005436\|Ga0070713_100573026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1070	Open in IMG/M
3300005437\|Ga0070710_10471491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rifamycini	854	Open in IMG/M
3300005439\|Ga0070711_100787790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300005439\|Ga0070711_101194594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300005445\|Ga0070708_102277915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba	500	Open in IMG/M
3300005544\|Ga0070686_100472014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	968	Open in IMG/M
3300005563\|Ga0068855_101361907	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005587\|Ga0066654_10736154	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005950\|Ga0066787_10004881	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300006028\|Ga0070717_10743810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	891	Open in IMG/M
3300006028\|Ga0070717_10807354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	853	Open in IMG/M
3300006028\|Ga0070717_10982555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	769	Open in IMG/M
3300006173\|Ga0070716_101033544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300006173\|Ga0070716_101372917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300006176\|Ga0070765_101944057	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300006358\|Ga0068871_100610540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	992	Open in IMG/M
3300006603\|Ga0074064_11636236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	820	Open in IMG/M
3300006604\|Ga0074060_11970727	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300006881\|Ga0068865_100317675	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300006904\|Ga0075424_101501240	Not Available	715	Open in IMG/M
3300009089\|Ga0099828_11009256	Not Available	741	Open in IMG/M
3300009090\|Ga0099827_10513764	Not Available	1030	Open in IMG/M
3300009092\|Ga0105250_10297720	Not Available	697	Open in IMG/M
3300009148\|Ga0105243_10389003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300010373\|Ga0134128_11239565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300010373\|Ga0134128_12622401	Not Available	555	Open in IMG/M
3300010376\|Ga0126381_103947425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300010396\|Ga0134126_11249701	All Organisms → cellular organisms → Bacteria → Terrabacteria group	824	Open in IMG/M
3300010858\|Ga0126345_1189235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300010862\|Ga0126348_1312661	Not Available	872	Open in IMG/M
3300010867\|Ga0126347_1126164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1142	Open in IMG/M
3300010876\|Ga0126361_11132684	Not Available	790	Open in IMG/M
3300012096\|Ga0137389_10147628	Not Available	1921	Open in IMG/M
3300012349\|Ga0137387_10929192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300012359\|Ga0137385_10740605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	819	Open in IMG/M
3300012944\|Ga0137410_10371671	Not Available	1147	Open in IMG/M
3300013306\|Ga0163162_12957452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300013307\|Ga0157372_11809479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300014326\|Ga0157380_13352798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300014495\|Ga0182015_10758919	Not Available	610	Open in IMG/M
3300015373\|Ga0132257_104317243	Not Available	517	Open in IMG/M
3300017946\|Ga0187879_10111038	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300018024\|Ga0187881_10355013	Not Available	603	Open in IMG/M
3300018035\|Ga0187875_10232886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300018042\|Ga0187871_10302616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300018047\|Ga0187859_10286961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300020582\|Ga0210395_11333106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300021178\|Ga0210408_11027061	Not Available	637	Open in IMG/M
3300021388\|Ga0213875_10492429	Not Available	589	Open in IMG/M
3300021403\|Ga0210397_10982443	Not Available	655	Open in IMG/M
3300021406\|Ga0210386_11675935	Not Available	526	Open in IMG/M
3300021432\|Ga0210384_11303942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300021475\|Ga0210392_10450183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	944	Open in IMG/M
3300021560\|Ga0126371_13090550	Not Available	563	Open in IMG/M
3300021560\|Ga0126371_13274734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300022840\|Ga0224549_1048790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300024347\|Ga0179591_1174737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	2017	Open in IMG/M
3300025900\|Ga0207710_10542344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300025911\|Ga0207654_10166815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1427	Open in IMG/M
3300025916\|Ga0207663_10342029	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1130	Open in IMG/M
3300025916\|Ga0207663_11257418	Not Available	596	Open in IMG/M
3300025928\|Ga0207700_10285014	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1422	Open in IMG/M
3300025928\|Ga0207700_10687963	Not Available	913	Open in IMG/M
3300025929\|Ga0207664_10993497	All Organisms → cellular organisms → Bacteria → Terrabacteria group	752	Open in IMG/M
3300025929\|Ga0207664_11813793	Not Available	532	Open in IMG/M
3300026078\|Ga0207702_11290041	Not Available	724	Open in IMG/M
3300026310\|Ga0209239_1213622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300027882\|Ga0209590_10010508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4312	Open in IMG/M
3300027884\|Ga0209275_10124837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1342	Open in IMG/M
3300028742\|Ga0302220_10033763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2272	Open in IMG/M
3300028775\|Ga0302231_10167033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300028781\|Ga0302223_10181097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	696	Open in IMG/M
3300028799\|Ga0307284_10474803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300029943\|Ga0311340_10714433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	857	Open in IMG/M
3300029944\|Ga0311352_10646153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	840	Open in IMG/M
3300030007\|Ga0311338_11379000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	657	Open in IMG/M
3300030007\|Ga0311338_11710735	Not Available	570	Open in IMG/M
3300030399\|Ga0311353_10082319	All Organisms → cellular organisms → Bacteria	3165	Open in IMG/M
3300030524\|Ga0311357_10235944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1774	Open in IMG/M
3300030524\|Ga0311357_10606182	Not Available	1006	Open in IMG/M
3300030580\|Ga0311355_10840037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300030677\|Ga0302317_10186642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	957	Open in IMG/M
3300031234\|Ga0302325_10889162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1239	Open in IMG/M
3300031234\|Ga0302325_11707585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300031236\|Ga0302324_100077450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5759	Open in IMG/M
3300031561\|Ga0318528_10784548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300031682\|Ga0318560_10779258	Not Available	516	Open in IMG/M
3300031719\|Ga0306917_10778523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300031748\|Ga0318492_10099128	Not Available	1430	Open in IMG/M
3300031771\|Ga0318546_10620119	Not Available	761	Open in IMG/M
3300031777\|Ga0318543_10482730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300031796\|Ga0318576_10453809	Not Available	605	Open in IMG/M
3300031798\|Ga0318523_10352310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300031833\|Ga0310917_10414694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300031859\|Ga0318527_10197531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300031879\|Ga0306919_10330267	Not Available	1162	Open in IMG/M
3300031893\|Ga0318536_10561053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300031910\|Ga0306923_10744342	Not Available	1087	Open in IMG/M
3300032001\|Ga0306922_11321159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300032205\|Ga0307472_100715125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903	Open in IMG/M
3300032782\|Ga0335082_11391086	Not Available	572	Open in IMG/M
3300032895\|Ga0335074_10358193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1616	Open in IMG/M
3300032895\|Ga0335074_11009416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300032897\|Ga0335071_10034577	Not Available	5016	Open in IMG/M
3300032897\|Ga0335071_10490378	Not Available	1181	Open in IMG/M
3300033289\|Ga0310914_11724121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300033822\|Ga0334828_158388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300034199\|Ga0370514_051759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1032	Open in IMG/M
3300034820\|Ga0373959_0122229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.44%
Host-Associated	Host-Associated	13.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.36%
Plants	Host-Associated → Plants	13.56%
Aquatic	Environmental → Aquatic	5.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.95%
Peat	Environmental → Terrestrial → Peat	14.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.63%
Freshwater	Environmental → Aquatic → Freshwater	5.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.24%
Roots	Host-Associated → Plants → Roots	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.14%
Loam	Environmental → Terrestrial → Soil → Loam	22.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.41%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.39%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.39%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.69%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1014599181	3300004092	Bog Forest Soil	DLSRFAGTSVQAAEIRNEARSSRMRSRNRRAHAYEMSLTSEDITEIEKTAGTELRRLGYAL*
Ga0070680_1001739932	3300005336	Corn Rhizosphere	DLSRFAGTTVPSAEIRNEARTARSRGRGRRGPAYEASLNAEDITEIEKIAGEEIRRLGYTL*
Ga0070667_1005269721	3300005367	Switchgrass Rhizosphere	PSAEIRNEARTARSRARGRRGPAYEASLNAEDITEIEKVAGEEVRRLGYTL*
Ga0070709_111412512	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ADLSRFVGTTVQAAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIAGEELRRLGYAL*
Ga0070709_112050491	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ADLSRFVGTTVQAAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIAGEELRRLGYSI*
Ga0070714_1007030341	3300005435	Agricultural Soil	SKPDEALADLSRFAGTSVQTAEIRNEARSARTRGRGRRSPAYESSLTSEDIAQIEKIAGEELRRLGYTP*
Ga0070714_1014662141	3300005435	Agricultural Soil	TAEIRNEARSARTRGRGRRSPAYESSLTSEDIAQIEKIAGEELRRLGYTP*
Ga0070714_1016387181	3300005435	Agricultural Soil	SKPDEALADLSRFAGTSVQTAEIRNEARSARTRGRGRRSPAYESSLASEDIVQIEKIAGEELRRLGYTP*
Ga0070713_1003047523	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	HLLSKPDEALADLSRFAGTSVQAAEIRNEARSARTRGRGRRSPTYESSLTSEDIAQIEKIAGDELRRLGYAP*
Ga0070713_1005730261	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RFAGTSVQAAEIRNEARSARTRGRGRRSPAYESSLTSEDIAQIEKIAGEELRRLGYAP*
Ga0070710_104714911	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SKPDEALADLSRFAGTSVQAAEIRNEARSARTRGRGRRSPAYESSLTSEDIAQIEKIAGEELRRLGYAP*
Ga0070711_1007877902	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VQAAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIAGEELRRLGYSI*
Ga0070711_1011945941	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VQAAEIRNEARSARTRGRGRRSPAYESSLTSEDIAQIEKIAGEELRRLGYAP*
Ga0070708_1022779151	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ALADLSRFVGTTVQAAEIRNEARTARTRGRGRRGPAYEMSLTSEDITQIEKIAGEELRRLGYSI*
Ga0070686_1004720142	3300005544	Switchgrass Rhizosphere	RFAGTTVPSAEIRNEARTARSRGRGRRGHAYEASLNAEDITEIEKVAGEEIRRLGYTP*
Ga0068855_1013619072	3300005563	Corn Rhizosphere	PSAEIRNEARTARSRGRGRRGPAYEASLNAEDITEIEKIAGEEIRRLGYTL*
Ga0066654_107361543	3300005587	Soil	TAEIRNEARTARTRGRNRRGPGYEMTLTSEDVTQIEKIAGEELRRLGYSL*
Ga0066787_100048811	3300005950	Soil	ADLSRFTGTTVQAAEIRSAARAARGRGRSRRSPGYEGSLSPQDIAEVEKIAGDELRRLGYALP*
Ga0070717_107438101	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RFAGTSVQAAEIRNEARSARTRGRGRRSPAYESSLTSEDTAQIEKIAGEELRRLGYTP*
Ga0070717_108073542	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YEHLLSKPDEALADLSRFAGTSVQAAEIRNEARSARTRGRGRRSPAYESSLTCEDIAQIEKMAGEELRRLGYAP*
Ga0070717_109825551	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FAGTSVQTAEIRNEARSARTRGRGRRSPAYESSLASEDVAQIEKIAGEELRRLGYTP*
Ga0070716_1010335442	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	YLLSKPEDALADLSRFVGTTVQAAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIAGEELRRLGYSI*
Ga0070716_1013729171	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ALADLSRFAGTTVPSAEIRNEARTARSRARGRRGPAYEASLNAEDITEIEKVAGEEVRRLGYTL*
Ga0070765_1019440572	3300006176	Soil	FTGTTVQAAEIRSAARATRGRGRSRRPSGYEGSLSADGIAEVEKIAGDELRRLGYALP*
Ga0068871_1006105402	3300006358	Miscanthus Rhizosphere	KPEDALADLSRFAGTTVPSAEIRNEARTARSRGRGRRGHAYEASLNAEDITEIEKVAGEEIRRLGYTP*
Ga0074064_116362362	3300006603	Soil	GTTVPSAEIRNEARTARARGRSRRGPSYETSLSSEDITQIEKIAGEEIRRLGYTL*
Ga0074060_119707272	3300006604	Soil	GTTVPSAEIRNEARTARSRGRSRRGPAYETSLNSEDIAQIEKIAGEEIRRLGYTL*
Ga0068865_1003176752	3300006881	Miscanthus Rhizosphere	GTTVPSAEIRNEARTARSRGRGRRGPSYEASLNSEDITQIEKIAGEEIRRLGYTL*
Ga0075424_1015012401	3300006904	Populus Rhizosphere	ADLSRFAGTSVQTAEIRNEARSARTRGRGRRSPAYESSLTSEDIAQIEKIAGDELRRLGYAP*
Ga0099828_110092561	3300009089	Vadose Zone Soil	GTTVQAAEIRNDARAARTRSRNRRAPAYEGSLTAEDISEIEKTAGEELRRLGYTL*
Ga0099827_105137641	3300009090	Vadose Zone Soil	VQAAEIRNEARAARTRNRNRRAPAYEMSLTTEDITEIEKTAGEELRRLGYTL*
Ga0105250_102977202	3300009092	Switchgrass Rhizosphere	LSKPEDALPDLSRFAGTTVPSAEIRNEARTARSRGRGRRGSAYETSLNSEDITQIEKIAGEQIRHLCHTH*
Ga0105243_103890032	3300009148	Miscanthus Rhizosphere	SRFAGTTVPSAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIAGEEIRRLGYTL*
Ga0134128_112395651	3300010373	Terrestrial Soil	LADLSRFVGTTVQAAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIAGEELRRLGYSI*
Ga0134128_126224011	3300010373	Terrestrial Soil	DLSRFAGTSVQAAEIRNEARSARTRGRGRRSPAYESSLTSEDITQIEKIAGEELRRLGYAP*
Ga0126381_1039474251	3300010376	Tropical Forest Soil	ALADLSRFVGNSVPTAQIRNEARTARARGRSRRGPAYESSLTTEDITQIEKIAGDELRRLGYTL*
Ga0134126_112497011	3300010396	Terrestrial Soil	TSVQAAEIRNEARSARTRGRGRRSPAYESSLTSEDITQIEKIAGEELRRLGYTP*
Ga0126345_11892351	3300010858	Boreal Forest Soil	PEDALADLSRFAGATVPSAEIRNEARTARSRSRSRRGPAYETSLNAEDITQIEKIAGEEIRRLGYTL*
Ga0126348_13126612	3300010862	Boreal Forest Soil	FAGTSVQAAGIRNEARASRSRGRSRRSAAYELSLTTEDIAEIEKVAGEELRRLGYVL*
Ga0126347_11261641	3300010867	Boreal Forest Soil	RFAGTSVQTAEIRNEARTARTRGRGRRTPVHELSLTAEDITQIEKIAGEELRRLGYAP*
Ga0126361_111326842	3300010876	Boreal Forest Soil	KPDEALADLSRFAGTTVQAAEIRNEARRSRGRGRARRSSAYEGSLSTEDIAEVEKMAGEELRRLGYAL*
Ga0137389_101476281	3300012096	Vadose Zone Soil	TTVQAAEIRNDARAARTRSRNRRAPAYEGSLTAEDISEIEKTAGQELRRLGYTL*
Ga0137387_109291921	3300012349	Vadose Zone Soil	EDALADLSRFAGTTVPSAEIRNEARAARSRGRSRRGPAYEASLNSEDITQIEKIAGEEIRRLGYTL*
Ga0137385_107406051	3300012359	Vadose Zone Soil	LSRPDEALADLSRFAGTTVQAAEIRNEARAARARSRGRRAPAYEMSLTNEDIAEIDKTAGEELRRLGYAL*
Ga0137410_103716712	3300012944	Vadose Zone Soil	TVQAAEIRNEARTARVRGRSRRGPAYEMSLTSEDITQIEKIAGEELRRLGYTI*
Ga0163162_129574522	3300013306	Switchgrass Rhizosphere	FAGTTVPSAEIRNEARTARSRGRGRRGPSYEASLNSEDITQIEKIAGEEIRRLGYTL*
Ga0157372_118094791	3300013307	Corn Rhizosphere	KPEDALADLSRFVGTTVQAAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIAGEELRRLGYSI*
Ga0157380_133527982	3300014326	Switchgrass Rhizosphere	KTICYEHLLSKPEDALADLSRFAGTTVPSAEIRNEARTARSRGRGRRGHAYEASLNAEDITEIEKVAGEEIRRLGYTP*
Ga0182015_107589191	3300014495	Palsa	DEVVADLSSFTGTTVQAAEIRNEARASRSRGRARKASAYEGSLSTEDIAEVEKIAGEELRRLGYAF*
Ga0132257_1043172432	3300015373	Arabidopsis Rhizosphere	GKPEEAVADLSRFAGTSMQAAEIRNEARTARVRSRSRRGPAYATSLITEDIIQIEKIAGEELRRLGYAL*
Ga0187879_101110381	3300017946	Peatland	LADLSSFVGTTVQAAEIRQQARSAAGRGRGRGRRPPAYESLLSTEDIAQIEKIGGEELRRLGYTLP
Ga0187881_103550131	3300018024	Peatland	EVLADLSRFTGTTVQAAEIRSAARAARGRGRSRRSAGYEGSLSADDIAEVEKIAGDELRRLGYLP
Ga0187875_102328862	3300018035	Peatland	AGTTVQAAEIRGAARAARGRGRSRRSPGYEGSLSADDIAEVEKIAGDELRRLGYAP
Ga0187871_103026163	3300018042	Peatland	VLADLSRFTGTTVQAAEIRSAARAARGRGRSRRSPGYEGSLSPADIAEVEKIAGDELRRLGYALP
Ga0187859_102869611	3300018047	Peatland	VQAAEIRNAARAARGRGRSRRSAGYEGSLSADDIAEVEKIAGDELRRLGYLP
Ga0210395_113331061	3300020582	Soil	HLMGKPDEVMADLSRFIGTTVQAAEIRSAARATRGRGRSRRPSGYEGSLSADGIAEVEKIAGDELRRLGYALP
Ga0210408_110270612	3300021178	Soil	ADLSRFVGTNVQAAEIRNEARAFRTRSRSRRAPAYEMSLTTEDITEIEKIAGEELRRLGYTV
Ga0213875_104924291	3300021388	Plant Roots	ALAELSRFTGTTVQAAEIRNEARTARTRSRNRRGPAYEASLSPKDITQIEKIAGEELRRLGYTV
Ga0210397_109824431	3300021403	Soil	TVQAAEIRNEARTARTRGRSRRGPAYEMSLASEDITQIEKIAGEELRRLGYSI
Ga0210386_116759352	3300021406	Soil	YLLSKPEDALADLSRFVGTSMQAAEIRNEARAARARSRSRRGPAHETSLTSEDITQIEKIAGEELRRLGYTV
Ga0210384_113039422	3300021432	Soil	VQAAEIRNEARSSRTRSRNRRAHAYEMSLTSEDITEIEKMAGTELRRLGYAL
Ga0210392_104501831	3300021475	Soil	LSKPEDALADLSRFVGTTVQAAEIRNEARTARTRGRSRRGPAYEMSLASEDITQIEKIAGEELRRLGYSV
Ga0126371_130905501	3300021560	Tropical Forest Soil	AEIRNEARTARARSRNRRGPAYEASLSTEDIAQIEKIAGEELRRLGYAL
Ga0126371_132747341	3300021560	Tropical Forest Soil	DLSRFTGTTVQAAEIRNEARMYRARNRNRRSPGHENPLTTENITEIEKIAGEELRRLGYT
Ga0224549_10487901	3300022840	Soil	VLADLSRFIGTTVHAAEIRSAARATRGRGRSRRPSGYEGSLSADGIAEVEKIAGDQLRRLGYALP
Ga0179591_11747371	3300024347	Vadose Zone Soil	WPTCPASPARPCKAAEIRNEARTARVRGRNRRGPAYEMSLTSEDITQIEKIAGEELRRLGYTL
Ga0207710_105423441	3300025900	Switchgrass Rhizosphere	EHLLSKPEDALADLSRFAGTTVPSAEIRNEARTARSRARGRRGPAYEASLNAEDITEIEKVAGEEVRRLGYTL
Ga0207654_101668152	3300025911	Corn Rhizosphere	LLSKPEDALADLSRFAGTTVPSAEIRNEARTARSRGRGRRGPAYEASLNAEDITEIEKVAGEEVRRLGYTL
Ga0207663_103420291	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RFAGTSVQAAEIRNEARSARTRGRGRRSPAYESSLTSEDIAQIEKIAGEELRRLGYTP
Ga0207663_112574182	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LSRFVGTTVQAAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIAGEELRRLGYAL
Ga0207700_102850141	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HLLSKPDEALADLSRFAGTSVQAAEIRNEARSARTRGRGRRSPTYESSLTSEDIAQIEKIAGDELRRLGYAP
Ga0207700_106879631	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AEIRNEARSARTRGRGRRSPAYESSLTSEDIAQIEKIAGEELRRLGYTP
Ga0207664_109934971	3300025929	Agricultural Soil	SVQAAEIRNEARSARTRGRGRRSPAYESSLTSEDTAQIEKIAGEELRRLGYTP
Ga0207664_118137931	3300025929	Agricultural Soil	DLSRFVGTTVQAAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIAGEELRRLGYA
Ga0207702_112900411	3300026078	Corn Rhizosphere	FAGTSVQAAEIRNEARSARTRGRGRRSPTYESSLTSEDIAQIEKIAGDELRRLGYAP
Ga0209239_12136223	3300026310	Grasslands Soil	DLGRFAGTTVQTAEIRNEARTARTRGRNRRGPGYEMTLTSEDVTQIEKIAGEELRRLGYS
Ga0209590_100105081	3300027882	Vadose Zone Soil	AGTTVQAAEIRNEARAARTRNRNRRAPAYEMSLTTEDITEIEKTAGEELRRLGYTL
Ga0209275_101248372	3300027884	Soil	VAAAEIRNEARTLRTRGRSRGAPTHQRSLGSQDIAQVEKIAGEELRRLGYTS
Ga0302220_100337631	3300028742	Palsa	FTGTTVQAAEIRSAARAARGRGRSRRSPGYEGSLSADDIAEVEKIAGDELRRLGYALP
Ga0302231_101670332	3300028775	Palsa	RFTGTTVQAAEIRSAARAARGRGRSRRSPGYEGSLSPEDIAEVEKIAGDELRRLGYALP
Ga0302223_101810972	3300028781	Palsa	TTVQAAEIRNEARATRGRGRARKASGYEGSLSAEDIAEVEKIAGEELRRLGYAF
Ga0307284_104748031	3300028799	Soil	YEHLLSKPEDALADLSRFAGTTVPSAEIRNEARTARSRGRGRRGPAYETSLNSEDITQIEKIAGEEIRRLGYTL
Ga0311340_107144332	3300029943	Palsa	AEIRNEARATRGRGRARKASGYEGSLSAEDIAEVEKIAGEELRRLGYAF
Ga0311352_106461532	3300029944	Palsa	SRFTGTTVQAAEIRSAARAARGRGRSRRSPGYEGSLSADDIAEVEKIAGDELRRLGYALP
Ga0311338_113790002	3300030007	Palsa	TGTTVQAAEIRSAARAARGRGRSSRSPGYEGSLSAEDIAEVEKIAGDELRRLGYALP
Ga0311338_117107351	3300030007	Palsa	AEIRSAARAARGRGRSRRSPGYEGSLSADDIAEVEKIAGDELRRLGYALP
Ga0311353_100823194	3300030399	Palsa	TGTTVQAAEIRSAARAARGRGRSRRSPGYEGSLSADDIAEVEKIAGDELRRLGYALP
Ga0311357_102359441	3300030524	Palsa	PDEVLADLSSFIGTTVQTAEIRNEARASRGRGRARKASVYEGSLSTEDIAEVEKIAGEELRRLGYAF
Ga0311357_106061821	3300030524	Palsa	GKPDEVLADLSRFTGTTVQAAEIRSAARAARGRGRSRRSPGYEGSLSADDIAEVEKIAGDELRRLGYAP
Ga0311355_108400371	3300030580	Palsa	IRSAARAARGRGRSRRSPGYEGSLSADDIAEVEKIAGDELRRLGYAP
Ga0302317_101866422	3300030677	Palsa	DDVLADLSRFTGTTVQAAEIRSAARAARGRGRSRRSPGYEGSLSPEDIAEVEKIAGDELRRLGYALP
Ga0302325_108891621	3300031234	Palsa	LADLSRFTGTTVQAAEIRSAARAARGRGRSRRSPGYEGSLSADDIAEVEKIAGDELRRLGYAP
Ga0302325_117075852	3300031234	Palsa	HLMGKPDDVLAELSRFTGTTVQAAEIRSAARAARGRGRSRRSPAYEGSLSPEDIAEVEKIAGDELRRLGYALP
Ga0302324_1000774501	3300031236	Palsa	EIRNAARAARGRGRSRRSPGYEGSLSPQDIAEVEKIAGDELRRLGYTLP
Ga0318528_107845481	3300031561	Soil	KPEETLADLSRFAGTPVPTAEIRNEARAARSRGRNRRGPAYEMSLTTEDITQIEKIAGEELRRLGYAL
Ga0318560_107792582	3300031682	Soil	PEDALADLSRFAGTSVQAAEIRNEARTARARGRNRRGPAYEASLITEDITEIEKIAGDELRRLGYAP
Ga0306917_107785232	3300031719	Soil	PDEALADLSRFAGTTVQAAEIRNEARVSRIRTRSRRAPAHEMSLTAEDLAQLEKIAGEELRRLGYAP
Ga0318492_100991282	3300031748	Soil	ADLSRFAGTTVQAAEIRNEARVSRARNRGRRAPAHETSLTTEDLAQLEKIAGEELRRLGYAA
Ga0318546_106201191	3300031771	Soil	ADLSRFAGTSVQAAEIRNEARTARARSRNRRGPAYEASLTTEDIAQIEKIAGEELRRLGYAV
Ga0318543_104827302	3300031777	Soil	SKPDEALADLSRFAGTTVQAAEIRNEARVSRIRTRSRRAPAHEMSLTAEDLAQLEKIAGEELRRLGYAP
Ga0318576_104538091	3300031796	Soil	AVQTAEIRNEARIARARSRHRRGPGYEMTLSTEDVTQIEKIAGEELRRLGYAP
Ga0318523_103523101	3300031798	Soil	KPEETLADLSRFAGTSVQTAEIRNEARAARSRGRNRRGPAYEMSLTTEDITQIEKIAGEELRRLGYAL
Ga0310917_104146942	3300031833	Soil	EALADLSRFAGTAVQTAEIRNEARIARARSRHRRGPGYEMTLSTEDVTQIEKIAGEELRRLGYAP
Ga0318527_101975312	3300031859	Soil	LSRFAGTPVPTAEIRNEARAARSRGRNRRGPAYEMSLTTEDITQIEKIAGEELRRLGYAP
Ga0306919_103302672	3300031879	Soil	TSVQAAEIRNEARTARARSRNRRRPAYEASLTTEDITQIEKIAGEELRRLGYAL
Ga0318536_105610532	3300031893	Soil	AGTSVQAAEIRNEARTARARSRNRRRPAYEASLTTEDITQIEKIAGEELRRLGYAL
Ga0306923_107443422	3300031910	Soil	GTSVQTAEIRNEARAARSRGRNRRGPAYEMSLTTEDITQIEKIAGEELRRLGYAL
Ga0306922_113211591	3300032001	Soil	LSKPDEALADLSRFAGITVQAAEIRNEARVSRIRTRSRRAPAHEMSLTAEDLAQLEKIAGEELRRLGYAP
Ga0307472_1007151251	3300032205	Hardwood Forest Soil	FVGTTVQAAEIRNEARTARTRGRSRRGPAYEMSLTSEDITQIEKIASEELRRLGYSI
Ga0335082_113910861	3300032782	Soil	LLSRPDEAVADLSRFAGTSVQAAEIRNEARTARARSRNRRGPAYETSLVTEDITEIEKIAGEELRRLGYAL
Ga0335074_103581932	3300032895	Soil	GVTVAAAEIRNEARMARTRGRSRGTAPTHQRSLGSHDIAQIEKIAGEELRRLGYTS
Ga0335074_110094162	3300032895	Soil	PDEILADLSRFTGTTVQPAEIRNEARTARLRSRNHRGPAYEMSLSADDITEIEKTGGEELRRLGYPVA
Ga0335071_100345771	3300032897	Soil	VQSARIRDEARTARARSRSRRGPAYESSLSTEDITEIEKIAGEELRRLGYAF
Ga0335071_104903782	3300032897	Soil	HLLSKPDEALADLSRFAGTSVQAAEIRNEARSARTRGRARRSPAYESSLTTEDIAQIEKIAGEELRRLGYAP
Ga0310914_117241212	3300033289	Soil	SRFAGTSVQTAEIRNEARAARSRGRNRRGPAYEMSLTTEDITQIEKIAGEELRRLGYAL
Ga0334828_158388_2_175	3300033822	Soil	TTVQAAEIRNQARTAAGRGRGRGRRPPAYESLLSTEDIAQIEKIGGEELRRLGYTLP
Ga0370514_051759_3_218	3300034199	Untreated Peat Soil	EVALADLSSFAGTTVQAAEIRNQARTAMGGGRGRGRSRRAPAYESLLSTEHIAEIEKIGGEELRRLGYALS
Ga0373959_0122229_3_203	3300034820	Rhizosphere Soil	EAALADLSRFAGTTVPSAEIRNEARTARSRARGRRGPAYEASLNAEDITEIEKVAGEEVRRLGYTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076403

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences