Metagenome / Metatranscriptome Family F076390

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076390
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	51 residues
Representative Sequence	MIYAIFMLLVLLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF
Number of Associated Samples	101
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.34 %
% of genes near scaffold ends (potentially truncated)	25.42 %
% of genes from short scaffolds (< 2000 bps)	87.29 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.051 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.407 % of family members)
Environment Ontology (ENVO)	Unclassified (27.119 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.695 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.43% β-sheet: 0.00% Coil/Unstructured: 45.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF02600	DsbB	59.32
PF09084	NMT1	4.24
PF00496	SBP_bac_5	4.24
PF12680	SnoaL_2	3.39
PF00962	A_deaminase	1.69
PF00768	Peptidase_S11	1.69
PF03808	Glyco_tran_WecG	0.85
PF03171	2OG-FeII_Oxy	0.85
PF00005	ABC_tran	0.85
PF13202	EF-hand_5	0.85
PF01909	NTP_transf_2	0.85
PF04138	GtrA	0.85
PF14534	DUF4440	0.85
PF00656	Peptidase_C14	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1495	Disulfide bond formation protein DsbB	Posttranslational modification, protein turnover, chaperones [O]	59.32
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	4.24
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	4.24
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.69
COG1816	Adenosine/6-amino-6-deoxyfutalosine deaminase	Nucleotide transport and metabolism [F]	1.69
COG1922	UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family	Cell wall/membrane/envelope biogenesis [M]	0.85
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.05 %
Unclassified	root	N/A	16.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.05 %
Unclassified	root	N/A	16.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.05 %
Unclassified	root	N/A	16.95 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.95 %
Unclassified	root	N/A	16.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	51.69 %
Unclassified	root	N/A	16.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.39 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	39.83 %
Unclassified	root	N/A	16.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.39 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	39.83 %
Unclassified	root	N/A	16.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.78 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	3.39 %

Name	Rank	Taxonomy	Distribution
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	39.83 %
Unclassified	root	N/A	16.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.78 %
unclassified Oxalobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae	3.39 %

Name	Rank	Taxonomy	Distribution
Acidisoma cellulosilyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	39.83 %
Unclassified	root	N/A	16.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.78 %
Oxalobacteraceae bacterium CAVE-383	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium CAVE-383	3.39 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig42096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	941	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1037779	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300001546\|JGI12659J15293_10084206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	696	Open in IMG/M
3300002245\|JGIcombinedJ26739_100085013	All Organisms → cellular organisms → Bacteria → Proteobacteria	2944	Open in IMG/M
3300004005\|Ga0055448_10264357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	678	Open in IMG/M
3300004052\|Ga0055490_10254745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	542	Open in IMG/M
3300004058\|Ga0055498_10003783	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300004082\|Ga0062384_100265773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1048	Open in IMG/M
3300004145\|Ga0055489_10155407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	694	Open in IMG/M
3300004152\|Ga0062386_100082338	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300004152\|Ga0062386_100097073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	2261	Open in IMG/M
3300004152\|Ga0062386_100370203	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300005332\|Ga0066388_100079711	All Organisms → cellular organisms → Bacteria → Proteobacteria	3638	Open in IMG/M
3300005332\|Ga0066388_100186904	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300005332\|Ga0066388_101473757	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300005332\|Ga0066388_102737553	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300005332\|Ga0066388_105881581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium CAVE-383	620	Open in IMG/M
3300005332\|Ga0066388_108419408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	514	Open in IMG/M
3300005363\|Ga0008090_14405561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	590	Open in IMG/M
3300005434\|Ga0070709_11550965	Not Available	539	Open in IMG/M
3300005436\|Ga0070713_100230859	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300005437\|Ga0070710_10762056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	688	Open in IMG/M
3300005602\|Ga0070762_10014951	All Organisms → cellular organisms → Bacteria	3965	Open in IMG/M
3300005713\|Ga0066905_100594411	All Organisms → cellular organisms → Bacteria → Proteobacteria	936	Open in IMG/M
3300005764\|Ga0066903_100286181	All Organisms → cellular organisms → Bacteria → Proteobacteria	2590	Open in IMG/M
3300005764\|Ga0066903_100973581	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300005764\|Ga0066903_102556825	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300005764\|Ga0066903_103441176	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300005764\|Ga0066903_107001473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	585	Open in IMG/M
3300005993\|Ga0080027_10326957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	612	Open in IMG/M
3300006028\|Ga0070717_10716787	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300006092\|Ga0082021_1118559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1133	Open in IMG/M
3300006173\|Ga0070716_101679392	Not Available	523	Open in IMG/M
3300006178\|Ga0075367_10972257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	542	Open in IMG/M
3300006578\|Ga0074059_12149487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	993	Open in IMG/M
3300006904\|Ga0075424_101494227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	717	Open in IMG/M
3300010043\|Ga0126380_10860099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium CAVE-383	749	Open in IMG/M
3300010046\|Ga0126384_11102570	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300010339\|Ga0074046_10010804	Not Available	6798	Open in IMG/M
3300010343\|Ga0074044_10067350	All Organisms → cellular organisms → Bacteria → Proteobacteria	2427	Open in IMG/M
3300010358\|Ga0126370_11065978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium CAVE-383	742	Open in IMG/M
3300014308\|Ga0075354_1003218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	2015	Open in IMG/M
3300014317\|Ga0075343_1199695	Not Available	521	Open in IMG/M
3300014489\|Ga0182018_10699615	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300014501\|Ga0182024_10864811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1094	Open in IMG/M
3300014881\|Ga0180094_1164266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium CAVE-383	520	Open in IMG/M
3300014969\|Ga0157376_12236751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	586	Open in IMG/M
3300015206\|Ga0167644_1081648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1022	Open in IMG/M
3300016270\|Ga0182036_10250266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1326	Open in IMG/M
3300016294\|Ga0182041_12065604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	531	Open in IMG/M
3300017939\|Ga0187775_10530380	Not Available	505	Open in IMG/M
3300017966\|Ga0187776_10612964	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300018058\|Ga0187766_10156670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1417	Open in IMG/M
3300018058\|Ga0187766_11232060	Not Available	543	Open in IMG/M
3300018064\|Ga0187773_10711412	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300018086\|Ga0187769_10148152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1717	Open in IMG/M
3300019885\|Ga0193747_1080005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	803	Open in IMG/M
3300020579\|Ga0210407_10578461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	876	Open in IMG/M
3300020582\|Ga0210395_10225142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1408	Open in IMG/M
3300021168\|Ga0210406_10731866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	759	Open in IMG/M
3300021361\|Ga0213872_10468094	Not Available	505	Open in IMG/M
3300021374\|Ga0213881_10513205	Not Available	544	Open in IMG/M
3300021377\|Ga0213874_10390659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	540	Open in IMG/M
3300021384\|Ga0213876_10246386	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300021388\|Ga0213875_10294428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	767	Open in IMG/M
3300021420\|Ga0210394_11180617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	658	Open in IMG/M
3300021475\|Ga0210392_11420446	Not Available	519	Open in IMG/M
3300021478\|Ga0210402_10182044	All Organisms → cellular organisms → Bacteria → Proteobacteria	1926	Open in IMG/M
3300021478\|Ga0210402_11540373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300021560\|Ga0126371_10590654	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300024271\|Ga0224564_1127927	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300025898\|Ga0207692_10960171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	563	Open in IMG/M
3300025900\|Ga0207710_10223025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	936	Open in IMG/M
3300025905\|Ga0207685_10256183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	848	Open in IMG/M
3300025939\|Ga0207665_11032981	Not Available	654	Open in IMG/M
3300025955\|Ga0210071_1047728	Not Available	546	Open in IMG/M
3300025971\|Ga0210102_1127837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	546	Open in IMG/M
3300025985\|Ga0210117_1000778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	3045	Open in IMG/M
3300027812\|Ga0209656_10155282	All Organisms → cellular organisms → Bacteria → Proteobacteria	1143	Open in IMG/M
3300027895\|Ga0209624_10194013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1348	Open in IMG/M
3300027908\|Ga0209006_10913271	Not Available	704	Open in IMG/M
3300028768\|Ga0307280_10263090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	623	Open in IMG/M
3300028784\|Ga0307282_10225939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	897	Open in IMG/M
3300028884\|Ga0307308_10117467	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300030007\|Ga0311338_10652094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1073	Open in IMG/M
3300030760\|Ga0265762_1045237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	871	Open in IMG/M
3300031028\|Ga0302180_10642073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	508	Open in IMG/M
3300031236\|Ga0302324_102475883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	634	Open in IMG/M
3300031274\|Ga0307442_1011774	All Organisms → cellular organisms → Bacteria → Proteobacteria	3482	Open in IMG/M
3300031274\|Ga0307442_1051675	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300031364\|Ga0307445_10108211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1040	Open in IMG/M
3300031364\|Ga0307445_10251641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	608	Open in IMG/M
3300031511\|Ga0307424_1045389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1509	Open in IMG/M
3300031537\|Ga0307419_10034646	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300031573\|Ga0310915_10180684	All Organisms → cellular organisms → Bacteria → Proteobacteria	1470	Open in IMG/M
3300031708\|Ga0310686_109744452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1406	Open in IMG/M
3300031708\|Ga0310686_116563191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1112	Open in IMG/M
3300031781\|Ga0318547_10830397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	576	Open in IMG/M
3300031797\|Ga0318550_10588230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	535	Open in IMG/M
3300031798\|Ga0318523_10395422	Not Available	687	Open in IMG/M
3300031835\|Ga0318517_10413978	Not Available	609	Open in IMG/M
3300031879\|Ga0306919_10432494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1012	Open in IMG/M
3300031910\|Ga0306923_11016001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	900	Open in IMG/M
3300032001\|Ga0306922_10508850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1283	Open in IMG/M
3300032042\|Ga0318545_10299423	Not Available	578	Open in IMG/M
3300032055\|Ga0318575_10563676	Not Available	578	Open in IMG/M
3300032066\|Ga0318514_10324906	Not Available	814	Open in IMG/M
3300032089\|Ga0318525_10451052	Not Available	659	Open in IMG/M
3300032160\|Ga0311301_10826363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1266	Open in IMG/M
3300032261\|Ga0306920_100481543	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300032261\|Ga0306920_103576030	Not Available	573	Open in IMG/M
3300032756\|Ga0315742_12354316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	604	Open in IMG/M
3300032893\|Ga0335069_11242178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	814	Open in IMG/M
3300032897\|Ga0335071_10106814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2744	Open in IMG/M
3300033290\|Ga0318519_10558476	Not Available	693	Open in IMG/M
3300034090\|Ga0326723_0290508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	733	Open in IMG/M
3300034147\|Ga0364925_0003222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4587	Open in IMG/M
3300034148\|Ga0364927_0018247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1631	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.53%
Host-Associated	Host-Associated	6.78%
Engineered	Engineered	1.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.42%
Aquatic	Environmental → Aquatic	16.10%
Plants	Host-Associated → Plants	6.78%
Wastewater	Engineered → Wastewater	0.85%
Modeled	Engineered → Modeled	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.49%
Marine	Environmental → Aquatic → Marine	11.02%
Freshwater	Environmental → Aquatic → Freshwater	4.24%
Peat	Environmental → Terrestrial → Peat	3.39%
Roots	Host-Associated → Plants → Roots	3.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.39%
Floodplain	Environmental → Terrestrial → Floodplain	1.69%
Sediment	Environmental → Aquatic → Sediment	0.85%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.85%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.85%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.59%
Loam	Environmental → Terrestrial → Soil → Loam	21.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.71%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.93%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.54%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.85%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.85%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.85%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.78%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.93%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.54%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.54%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.85%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.85%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.78%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.93%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.08%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.08%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.39%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.54%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.69%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.69%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.85%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.85%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Wastewater Treatment Plant	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant	0.85%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.85%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004005	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006092	Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, Singapore	Engineered	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025985	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031274	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30	Environmental	Open in IMG/M
3300031364	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-30	Environmental	Open in IMG/M
3300031511	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-20	Environmental	Open in IMG/M
3300031537	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-30	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0096.00002970	2166559005	Simulated	MVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
AP72_2010_repI_A100DRAFT_10377793	3300000837	Forest Soil	MIYAIFMLLVLAVLVASWRGSTLELPLFVVTVAWVLVHLVLDMTAPL
JGI12659J15293_100842062	3300001546	Forest Soil	MIYAVFMTLVLLTLLASWRGHGLELTLFCITVVSVLAHLIADMTSPLTLSF*
JGIcombinedJ26739_1000850132	3300002245	Forest Soil	MVYAVFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF*
Ga0055448_102643572	3300004005	Natural And Restored Wetlands	MVYAIFMLLTLVTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF*
Ga0055490_102547451	3300004052	Natural And Restored Wetlands	MVYAIFMLLTLMTLAANWLRHPLQLPLFVVAVVWMAAYLVLDMTTPLTLSF*
Ga0055498_100037832	3300004058	Natural And Restored Wetlands	MVYAIFMLLTLMTLAANWLRYPLQLPLFIVTVVWMALYLALDMTTPLTLSF*
Ga0062384_1002657732	3300004082	Bog Forest Soil	MIYAVFMALVLLTLVASWRRHGLELTLFCITVLGVLAHLIADMTNPLTLSF*
Ga0055489_101554072	3300004145	Natural And Restored Wetlands	MVYAIFMLLTLMTLAANWLRHPLQLPLFIVTVVWMAVHLALDMTTPLTLSF*
Ga0062386_1000823382	3300004152	Bog Forest Soil	VIYAIFMLLVLLTLFAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF*
Ga0062386_1000970733	3300004152	Bog Forest Soil	MIYAIFMLLTLTALAANWLRHPLQLPLFIVAVVWMAVYLALDMTTPLTLSF*
Ga0062386_1003702034	3300004152	Bog Forest Soil	MVYAIFMLLLLLALVASWRGHVLELPLYLITVVWVLAHLIGEMTTPLALSL*
Ga0066388_1000797114	3300005332	Tropical Forest Soil	VVYAIFMLLVLLTLAASWRGYALGLLLFLITVAWVLVHLVLDMTDPLTLSF*
Ga0066388_1001869044	3300005332	Tropical Forest Soil	MVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLTLSF*
Ga0066388_1014737572	3300005332	Tropical Forest Soil	MVYAIFMLLVLLTLAAAWRRHALELPLFLVTLAWVLAHLIADMTNPLTLSF*
Ga0066388_1027375532	3300005332	Tropical Forest Soil	MIYAIFMLLVLAILGAAWRRSALALPLFVFTAAWVLVHLIGDITTPLTLSF*
Ga0066388_1058815811	3300005332	Tropical Forest Soil	MIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0066388_1084194082	3300005332	Tropical Forest Soil	TMIYAIFMLLVLLTLIAAWRRHALELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0008090_144055612	3300005363	Tropical Rainforest Soil	VLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLTLSF*
Ga0070709_115509652	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF*
Ga0070713_1002308592	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIYAIFMLLVLLTLVAAWCRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF*
Ga0070710_107620562	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MIYAIFMLLVLLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0070762_100149517	3300005602	Soil	MIYAVFMALVLLTLVASWRRHGLELTLFCITVLGVLAHLIADMTSPLTLSF*
Ga0066905_1005944112	3300005713	Tropical Forest Soil	MIYAIFMLLILLTLAAGWRRHWLELPLFFLTALWVLVHLVGDMTTPLTLSF*
Ga0066903_1002861812	3300005764	Tropical Forest Soil	MVYAIFMLLVLLTLAAGWRGHMLELPLFLVTVAWVLVHLVLDMTDPLTLSF*
Ga0066903_1009735812	3300005764	Tropical Forest Soil	MIYAILMLLVLATLGAAWRLSAFALPLFVFTAAWVLVHLIGDMTTPLTLSF*
Ga0066903_1025568252	3300005764	Tropical Forest Soil	MVYAIFMLLVLLTLLAQWRRHALELPLFLITLAWVLVHLVGDMTSPLTLSF*
Ga0066903_1034411762	3300005764	Tropical Forest Soil	MIYAIFMLLMLLTLIAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0066903_1070014731	3300005764	Tropical Forest Soil	MIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLSF*
Ga0080027_103269572	3300005993	Prmafrost Soil	AFMLLVLLTLVASLREHVLELPLFCITVLWALAYLIADMTSPLTLSF*
Ga0070717_107167872	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIYAIFMLLVLLTLVAAWRRHVLELPLFAITVLWVLIHLVGDMTTPLTLSF*
Ga0082021_11185592	3300006092	Wastewater Treatment Plant	MIYAMFMLLTLMALAASWFRHPLQLPLFIATVVLIAAHLALDMTTPLTLSF*
Ga0070716_1016793922	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MIYAVFMALVLLTLLASWRRHGLELTLFCITVVGVLAHLITDMTSPLTLSF*
Ga0075367_109722571	3300006178	Populus Endosphere	LVAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0074059_121494871	3300006578	Soil	MASNPMEGAEATMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF*
Ga0075424_1014942271	3300006904	Populus Rhizosphere	FMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0126380_108600992	3300010043	Tropical Forest Soil	MAVQLWEGAMVYAIFMLLVLLTLAAGWRGHMLELPLFLVTVAWVLVHLVLDMTDPLTLSF
Ga0126384_111025701	3300010046	Tropical Forest Soil	MAVQLWEGAMVYAIFMLLVLLTLAAGWRGHMLELPLFLVTVVWVLVHLVLDMTDPLTLSF
Ga0074046_100108048	3300010339	Bog Forest Soil	MLREYAAEARMDYAIFMLLLLLALVASWRGHALELPLYLITVVWVLAHLIGEMTTPLALSF*
Ga0074044_100673505	3300010343	Bog Forest Soil	MIYAVFMVLVLLTLVASWRRHLLELVLFCITVVCVLAHLIADMTTSLTLSF*
Ga0126370_110659782	3300010358	Tropical Forest Soil	MALRSGKSAKAVVVYAIFMLLVLLTLAASWRGYALGLLLFLITVAWVLVHLVLDMTDPLTLSF*
Ga0075354_10032182	3300014308	Natural And Restored Wetlands	MRIRERAMVYAIFMLLTLMTLAANWLRYPLQLPLFIVTVVWMALYLALDMTTPLTLSF*
Ga0075343_11996951	3300014317	Natural And Restored Wetlands	MRIRERAMVYAIFMLLTLMTLAANWLRHPLQLPLFIVTVVWMAVHLALDMTTPLTLSF*
Ga0182018_106996151	3300014489	Palsa	MIYAVFMVLVLLALVASWRRHVLELTLFCVTVVCVLAYLIADMTTPLTLSF*
Ga0182024_108648113	3300014501	Permafrost	MIYAAFMLLVLLTLVASSRKHVLELPLFGITVLWVLAHLIADMTSPLTLSF*
Ga0180094_11642662	3300014881	Soil	MVYAIFMLLVLATLAATWFRPALQLPLFIVTVAWMLVHLVLDMTTPLTLSF*
Ga0157376_122367511	3300014969	Miscanthus Rhizosphere	GLRTTRCAREVDVIYAIFMLLVLLTLVAAWRRHVLELPLFAVTAVWVLIHLVGDMTSPLTLSF*
Ga0167644_10816481	3300015206	Glacier Forefield Soil	MLLVLLTLVASLREHVLELPLFCITVLWALAYLIADMTSPLTLSF*
Ga0182036_102502661	3300016270	Soil	MIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFAGDMTTPLTLSF
Ga0182041_120656041	3300016294	Soil	DGATMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLSF
Ga0187775_105303802	3300017939	Tropical Peatland	MIYAIFMLFVLAILVASWRCSTLELPLFVFTVAWVLVHLVLDMT
Ga0187776_106129642	3300017966	Tropical Peatland	MIYAIFMLLVLAILFASWCGSTLEPPLFVVTVAWVLVHLVLDMTAPLSLSY
Ga0187766_101566703	3300018058	Tropical Peatland	MIYAIFMLLVLAIIVASWRGSTLELPLFVVTVAWVLVHLVPDMTAPLSLSY
Ga0187766_112320601	3300018058	Tropical Peatland	MVYAIYMLLTLMTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMMTPLTLSF
Ga0187773_107114122	3300018064	Tropical Peatland	MMYAIFMLLVLAILVASWRGSTLELPLFVVTVAWVLVHLVLDITAPLSLSY
Ga0187769_101481522	3300018086	Tropical Peatland	MIYAIFMLLVLAILFASWCGSTLEPPLFVVTVAWVLVHLVLDTTAPLSLSY
Ga0193747_10800053	3300019885	Soil	MAFNPMEGAEATMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLS
Ga0210407_105784613	3300020579	Soil	MLLVLLTLAAGWRGHILELPLFLVTAAWVLVHLVLDMTTPLTLSF
Ga0210395_102251422	3300020582	Soil	MIYAVFMALVLLTLVASWRRHGLELTLFCITVLGVLAHLIADMTSPLTLSF
Ga0210406_107318662	3300021168	Soil	MVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTSPLTLSF
Ga0213872_104680942	3300021361	Rhizosphere	MLTEYAAEARMVYAIFMLLLLLALVASWREHVLELPLYLITVVWVLAHLVGDMTTPLALS
Ga0213881_105132052	3300021374	Exposed Rock	MIYAIFMLLVLLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF
Ga0213874_103906591	3300021377	Plant Roots	AYMIYAIFMLLALLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF
Ga0213876_102463862	3300021384	Plant Roots	MIYAVFMALVLLTLLASWRRHWVELTLFCITVASVLAHLIADMTSPLTLSF
Ga0213875_102944281	3300021388	Plant Roots	AAHGNKAYMIYAIFMLLVLLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF
Ga0210394_111806171	3300021420	Soil	AAFMLLVLLTLLASSRKHVLELPLFCITVLWALAHLIADMTSPLTLSF
Ga0210392_114204462	3300021475	Soil	MLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
Ga0210402_101820441	3300021478	Soil	MVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSP
Ga0210402_115403733	3300021478	Soil	MIYAIFMLLVLLTLMAAWRRHVLELPLFVVTVLWVLIHLVGDMTSPLTLSF
Ga0126371_105906542	3300021560	Tropical Forest Soil	MVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLTLSF
Ga0224564_11279272	3300024271	Soil	MIYAVFMVLVLLTLVASWRRHVLELTLFCITVVCVLAYLIADMTTPLTLSF
Ga0207692_109601712	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MIYAIFMLLVLLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF
Ga0207710_102230251	3300025900	Switchgrass Rhizosphere	MIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF
Ga0207685_102561831	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	AVFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
Ga0207665_110329812	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MIYAVFMALVLLTLLASWRRHGLELTLFCITVVGVLAHLITDMTSPLTLSF
Ga0210071_10477282	3300025955	Natural And Restored Wetlands	MVYAIFMLLTLMTLAANWLRYPLQLPLFIVTVVWMALYLALDMTTPLTLSF
Ga0210102_11278372	3300025971	Natural And Restored Wetlands	MVYAIFMLLTLMTLAANWLRHPLQLPLFVVAVVWMAAYLVLDMTTPLTLSF
Ga0210117_10007784	3300025985	Natural And Restored Wetlands	YAIFMLLTLMTLAANWLRYPLQLPLFIVTVVWMALYLALDMTTPLTLSF
Ga0209656_101552822	3300027812	Bog Forest Soil	VIYAIFMLLVLLTLFAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF
Ga0209624_101940132	3300027895	Forest Soil	MIYAVFMTLVLLTLLASWRGHGLELTLFCITVVSVLAHLIADMTSPLTLSF
Ga0209006_109132712	3300027908	Forest Soil	MIYAVFMVLVLLTLIASWRRHVLELTLFCITVVCVPAYLIADITTPLT
Ga0307280_102630902	3300028768	Soil	EATMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
Ga0307282_102259392	3300028784	Soil	MAFNPMEGAEATMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
Ga0307308_101174671	3300028884	Soil	AEATMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
Ga0311338_106520943	3300030007	Palsa	TLVASSREHVLELPLFWVTVLWSLAYLIADMTSPLTLSF
Ga0265762_10452372	3300030760	Soil	MIYAAFMLLVLLTLVASSREHVLELPLFCITVLFSLAYLIADMTSPLTLSF
Ga0302180_106420732	3300031028	Palsa	MIYAAFMLLVLLTLVASSREHVLELPLFCITVLFSLAYLIADMTNPLTLSF
Ga0302324_1024758832	3300031236	Palsa	MIYATFMLLVLLTLVASSREHVLELPLFWVTVLWSLAYLIADMTSPLTLSF
Ga0307442_10117744	3300031274	Salt Marsh	MVYAIFMLLTLVTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF
Ga0307442_10516753	3300031274	Salt Marsh	MRIRERAMVYAIFMLLTLMTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF
Ga0307445_101082112	3300031364	Salt Marsh	MVYAIFMLLTLVTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLT
Ga0307445_102516411	3300031364	Salt Marsh	MVYAIFMLLTLMTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF
Ga0307424_10453892	3300031511	Salt Marsh	MVYAIFMLLTLATLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF
Ga0307419_100346463	3300031537	Salt Marsh	MRIRERAMVYAIFMLLTLVTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF
Ga0310915_101806842	3300031573	Soil	MVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPVTLSF
Ga0310686_1097444521	3300031708	Soil	MIYAVFMALVLLTLVASWRRHGLELTLFCITVVGVLAHLIADMTSPLTLSF
Ga0310686_1165631912	3300031708	Soil	MLLVLLTLIAAARKHVLELPLFCITVLWALAYLIADMTSPLSLSF
Ga0318547_108303972	3300031781	Soil	GPGCAREADVIYAIFMLLVLLTLIAAWRQHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF
Ga0318550_105882302	3300031797	Soil	SRVATSGPDGATMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLSF
Ga0318523_103954221	3300031798	Soil	MVYAIFMMLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLTLSF
Ga0318517_104139782	3300031835	Soil	MVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPRTLSF
Ga0306919_104324942	3300031879	Soil	MIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLSF
Ga0306923_110160012	3300031910	Soil	SGPDGATMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLSF
Ga0306922_105088502	3300032001	Soil	MIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLNF
Ga0318545_102994232	3300032042	Soil	MVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTD
Ga0318575_105636762	3300032055	Soil	MVYAIFMLLVLLTLAAGWRGHILELPLFLVTVASVLVHLVLDMTDPLTLSF
Ga0318514_103249062	3300032066	Soil	MVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLT
Ga0318525_104510522	3300032089	Soil	MVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLTLS
Ga0311301_108263632	3300032160	Peatlands Soil	MIYAVFMVLVLLTLVASWRRHLLELVLFCITVVCVLAHLIADMTTSLTLSF
Ga0306920_1004815432	3300032261	Soil	VVYAIFMLLVLLTLAAGWRGHMLELPLFLVTVAWVLVHLVLDMTDPLTLSF
Ga0306920_1035760302	3300032261	Soil	MVYAIFMLLVLLTLLAQWRRHALELPLFLITLVWVLAHLVGDMTSPLTLSF
Ga0315742_123543161	3300032756	Forest Soil	MIYAVFMVLILLTLVASWRRHVLELALFCITVVCVLAYLIADMTTPLTLSF
Ga0335069_112421782	3300032893	Soil	MIYAIFMLLVLLTLVAAWRRHVLELPLFAITVLWVLIHLVGDMTTPLTLSF
Ga0335071_101068144	3300032897	Soil	MIYAIFMLLVLLTLVAAWRRDVLELPLFVVTVLWVLIHLVGDMTTPLTLSF
Ga0318519_105584762	3300033290	Soil	MVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPVTLS
Ga0326723_0290508_123_278	3300034090	Peat Soil	MVYAIFMLLVLTTLAATWFRPALQLPLFIVTVAWMLVHLVLDMTTPLTLSF
Ga0364925_0003222_1525_1689	3300034147	Sediment	MAAMVYAIFMLLVLTTLAATWFRPALQLPLFIVTVAWMLVHLVLDITTPLTLSF
Ga0364927_0018247_1129_1284	3300034148	Sediment	MVYAIFMLLVLATLAATWFRPALQLPLFIVTVAWMLVHLVLDITTPLTLSF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076390

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences