NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F076378

Metagenome Family F076378

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F076378
Family Type Metagenome
Number of Sequences 118
Average Sequence Length 96 residues
Representative Sequence LEGYFRERTRLWAAAGLWGGILLTAFNLYAAATTYIPQFRVRNDFRLIYGTALAGWEHGYNHLYDLAAQKAAVEGLGQGTYWSPFLNPP
Number of Associated Samples 93
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 45.76 %
% of genes near scaffold ends (potentially truncated) 98.31 %
% of genes from short scaffolds (< 2000 bps) 92.37 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (83.898 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(25.424 % of family members)
Environment Ontology (ENVO) Unclassified
(42.373 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.932 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.
1E4A_00827320
2JGI10216J12902_1110327672
3JGI12053J15887_101297821
4JGI25382J37095_100762981
5JGI25382J43887_101057541
6JGI25617J43924_100665602
7Ga0066674_101982451
8Ga0066674_105299382
9Ga0066680_100848601
10Ga0066673_105812692
11Ga0066688_104782161
12Ga0066685_102116732
13Ga0066676_103530121
14Ga0066675_106845602
15Ga0070707_1015021931
16Ga0070697_1017947702
17Ga0066697_102060301
18Ga0070732_104030802
19Ga0070732_105139572
20Ga0066692_104245792
21Ga0066699_110827952
22Ga0066705_104204451
23Ga0066694_105285662
24Ga0066708_110514421
25Ga0066654_104797402
26Ga0066654_107103961
27Ga0070717_120366192
28Ga0075024_1000207811
29Ga0075024_1005546832
30Ga0075019_107348571
31Ga0075014_1002011601
32Ga0075014_1008022861
33Ga0070712_1005998871
34Ga0070712_1019010312
35Ga0066660_102984451
36Ga0079221_115296881
37Ga0075434_1004240052
38Ga0099793_101478521
39Ga0099794_101273371
40Ga0099829_114057612
41Ga0099830_103630901
42Ga0099830_109830202
43Ga0099830_110357181
44Ga0105240_123005181
45Ga0066709_1001599963
46Ga0066709_1004240322
47Ga0075423_103760142
48Ga0075423_117155701
49Ga0134109_103600871
50Ga0134084_102422242
51Ga0134086_100675621
52Ga0134064_100318642
53Ga0134064_101388891
54Ga0134065_103027301
55Ga0134111_100909582
56Ga0134111_101768761
57Ga0126379_117735391
58Ga0137392_103927271
59Ga0137391_104968331
60Ga0137391_111238072
61Ga0137393_105347671
62Ga0137393_108540101
63Ga0153984_11154511
64Ga0137389_109395561
65Ga0137389_112650861
66Ga0137388_102228592
67Ga0137388_109002172
68Ga0137388_120406371
69Ga0137383_107818332
70Ga0137363_108323431
71Ga0137399_110028731
72Ga0137370_106323561
73Ga0137386_107469701
74Ga0137390_108642741
75Ga0137390_117935972
76Ga0137390_117959081
77Ga0137395_100210824
78Ga0137396_110325911
79Ga0134078_103537071
80Ga0137420_11768141
81Ga0137420_13693893
82Ga0182035_108908012
83Ga0134074_13470482
84Ga0187821_100367621
85Ga0187821_102889702
86Ga0193731_10217592
87Ga0210382_100502942
88Ga0210409_105566861
89Ga0212123_103754122
90Ga0207665_110532701
91Ga0209236_12502581
92Ga0209238_11709941
93Ga0209238_12263342
94Ga0209268_10584251
95Ga0209686_10882781
96Ga0209686_11146072
97Ga0209687_10710872
98Ga0209801_12336971
99Ga0209267_10326281
100Ga0209158_10906412
101Ga0209159_100238216
102Ga0209059_10854562
103Ga0209378_10011441
104Ga0209807_10638712
105Ga0209376_13408222
106Ga0209805_10235594
107Ga0209648_106712551
108Ga0209648_107214442
109Ga0209577_100998262
110Ga0209577_108814342
111Ga0209178_11438682
112Ga0208989_102162032
113Ga0209580_106378662
114Ga0209701_107235781
115Ga0209283_100054381
116Ga0257175_10305782
117Ga0307312_101130721
118Ga0307374_103702862
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 52.99%    β-sheet: 0.00%    Coil/Unstructured: 47.01%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080LEGYFRERTRLWAAAGLWGGILLTAFNLYAAATTYIPQFRVRNDFRLIYGTALAGWEHGYNHLYDLAAQKAAVEGLGQGTYWSPFLNPPExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreSignal PeptideTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
85.6%14.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Freshwater Sediment
Iron-Sulfur Acid Spring
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Surface Soil
Agricultural Soil
Soil
Grasslands Soil
Grass Soil
Soil
Soil
Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Populus Rhizosphere
Corn Rhizosphere
Attine Ant Fungus Gardens
4.2%25.4%8.5%25.4%8.5%5.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4A_008273202170459003Grass SoilMDFFRRRTRLWAVGGLWTGILLSAFNLYAAFVTYIPQYLVRNDFRIIYGAALDGWQNGYGHLYDLVAQKAAVESLGAYWSPFLNPPPLAWLATPF
JGI10216J12902_11103276723300000956SoilLPAVLAFFRRRTRLWAVAGVWTGLLLTAFNVYAAAVTYVPQFLVRNDFRLVYGAALNGWRNGYAHLYDLAAQKEAVESLGAYWSPYLNPPALAWLGTPFLILPFHAAI
JGI12053J15887_1012978213300001661Forest SoilVVEYLRARTRLWGAAGLWAGLLLIAFDIYAAVVTYFPQYQVRNDFRLIYGAALTGLRHGYGHLYDLSAQKATVEGLGSGFYWSPFLNPPPLAWLATPFTVLP
JGI25382J37095_1007629813300002562Grasslands SoilVVWSLTLDAYVRARTRLWAAAGLWGGLLLIGVDIYVAVVTYIPQYRVRNDFRLIYGAALTGLHQGYGHLYDLAAQKQAVEG
JGI25382J43887_1010575413300002908Grasslands SoilVVWSLTLDAYVRARTRLWAAAGLWGGLLLIGVDIYVAVVTYIPQYRVRNDFRLIYGAALTGLHQGYGHLYDLAAQKQAVEGLGAGFYWSPFLNPPPLAWLVT
JGI25617J43924_1006656023300002914Grasslands SoilMDVVRSFTLDAYVRARTRLWAVAGLWGGLLLIGTDVYFAVVTYIPQYRVRNDFRLMYGAALTGLHQGYSHLYDLAAQKQAVEGLGAGFY
Ga0066674_1019824513300005166SoilVLLTAFNAYAAIVTYLPQFLVRNDFRLVYGAALNAWQHGYSHLYDLAEQQTVVESLGAYWSPFLNPPPLAW
Ga0066674_1052993823300005166SoilVIGFFRARTRLWAVAGLWTGLLLTGFNVYAAAVTYVPEFRVRNDFRLIYGAALTAWKQGYSHLYDLDAQKRTVEGLGGGTYWSPFLNPPP
Ga0066680_1008486013300005174SoilMRPSPYFWPALVQYFRERTRLWAAAGLWGGSLLLAFNLYAAVATYIPQYQVRNDFRLIYGAALNGWQNGYGHLYDLAAQKAVVEGLGWGTYWSPYLNPPTL
Ga0066673_1058126923300005175SoilMASFFRARIRLWAVAGLWTGVLLTAFNLYAAFATYIPQYLVRNDFRLIYGAALDGWQNGYGHLYDLVAQKAAVESLGGYWSPYLNPPPLAWIATPFLLAPFDVAMVLWTV
Ga0066688_1047821613300005178SoilMCPSPYFLPAVVTYFRERTRLWAVAGVWTGALLSAFNLYAAVATYIPQFLVRNDFRLVYGAALNAWEHGYGHLYDLGGQKNTVEGLGAYWSPFLNPPPLAWLG
Ga0066685_1021167323300005180SoilVAQPLFFACVIGFFRARTRLWAVAGLWTGLLLTGFNVYAAAVTYVPQFRVRNDFRLIYGAALTAWRQGYSHLYDLDAQKRAVEELGAGTYWSPFLNPPPLAWLATPFIALPFE
Ga0066676_1035301213300005186SoilVYFRERTRMWAAAGLWAGILLAAFNLYAAVTTYIPQHLVRNDFRLIYGAALNGWEHGYSRLYDLAAQKATVEGLQPGTYWSPFLNPPTLAWVATPFLGLPFDLALLLWTALLVGAALFAW
Ga0066675_1068456023300005187SoilMRPSPYFWPALVQYFRERTRLWAAAGLWGGSLLLAFNLYAAIATYVPQYQVRNDFRLIYGAALNGWQNGYGHLYDLAGQKAMVESLGSGTYWSPYLNPPTLAWIATPFL
Ga0070707_10150219313300005468Corn, Switchgrass And Miscanthus RhizosphereVSDYARERTRLWSVGGLWAGILLTAFNLYAALTTYVPGFRVRNDFRLIYGAALDGWTYGYSHLYDLAAQKQVVEGLGQGTYWSPYLNPP
Ga0070697_10179477023300005536Corn, Switchgrass And Miscanthus RhizosphereMRPSPYFLPTLVAYFRERTRMWAVAGLWGGLLLFGFNLYAATTTYVPQYLVRNDFRLIYGAALDGWNNGYAHLYDLAAQKAAVESLGPGAYWSPFLNPPTLAWIATPF
Ga0066697_1020603013300005540SoilVIRFLASRRKLWAFGGLALGLGLTALDVYFSILTYIPQYRIRNDFRLMYGTADLTLHQGYGHLYDLAAQKAAIENLGAGFYWSPFLNPPPLVWLVTPLTVLPFDLAV
Ga0070732_1040308023300005542Surface SoilVRTLQGYFRERARLWAAAGVWTGILLIAFDLYAAAVEFIPQYRFRNDFRLIYGAALAGWTSGYSHLYDLTAQKTATESLGSGIYWQPYLNPP
Ga0070732_1051395723300005542Surface SoilMAYLRERTRLWAVAGLWGGGLLAAFDVYAAIVTYIPGYQFRNDFRLIYGAALTTQDHGFSHLYDLAAQKSAVEGLGHGFYWSPFLNPPPLVWLAAPLTLLPFDVAI
Ga0066692_1042457923300005555SoilVRLWAVAGLWTGILLAGFNLYAAFVTYIPQYRVRNDFRLIYGAALNAWENGYGHLYDLASQKAAVEGLGAGTYWSPYLNP
Ga0066699_1108279523300005561SoilMWAAAGLWAGILLAAFNLYAAVTTYIPQHLVRNDFRLIYGAALNGWEHGYSRLYDLAAQKATVEGLQPGTYWSPFLNPPTLAWVATPFLGLPFDLALLVW
Ga0066705_1042044513300005569SoilVIRFLASRRKLWAFGGLALGLGLTALDVYFSILTYIPQYRIRNDFRLMYGTADLTLHQGYGHLYDLAAQKAAIENLGAGFYWSPFLNPPPLVWLVTPFTVLPFDL
Ga0066694_1052856623300005574SoilVAQPLFFACVIGFFRARTRLWAVAGLWTGLLLTGFNVYAAAVTYVPQFRVRNDFRLIYGAALTAWRQGYSHLYELDAQKRTVEGLGEGTYWSPFLNPPP
Ga0066708_1105144213300005576SoilMPALVDFLRTRTRLWSVAGLWTGLLLSGFNLYAAAVTYVPQFRVRNDFRLIYGSALTAWQQGYGHLYDLDAQQRTVEGLGAGTYWSPFLNPP
Ga0066654_1047974023300005587SoilMWAAAGLWAGILLAAFNLYAAVTTYIPQHLVRNDFRLIYGAALNGWEHGYSRLYDLAAQKATVEGLQPGTYWSPFLNPPTLAWVATPFLGLPIDLALLLWTALLV
Ga0066654_1071039613300005587SoilMRERGRLWAVGGLWAGVLLTAFNLYAAVTTYFPQYRVRNDFRLIYGAALDGWLYGYNHLYDLAAQKQVVEGLGPGTYWSPYLNPP
Ga0070717_1203661923300006028Corn, Switchgrass And Miscanthus RhizosphereVVWSLTLDAYVRTRARLWAIAGLWGGLLLIGTDVYFAVVTYIPQYRVRNDFRLMYGAALTGLHQGYSHLYDLAAQKHAVEGLGAGFYWSPFLNPPP
Ga0075024_10002078113300006047WatershedsLVWLARFEAYVRGRTRLWSAAGLWAGVLLIGFDVYAAVVTYIPEYRVRNDFRLIYGAALTGLHDGYGHLYDLAAQKTSVDGLGPGFYWSPFLNPPPLAWLATPLTVLPFNIAIWVWTLLV
Ga0075024_10055468323300006047WatershedsMRERTRLWGVAGLWGGVLLIAFDLYAAAVTYIPQYRVRNDFRLMYGAALAGLHDGYAHLYDLAAQQASVEGIGPGFYWSPF
Ga0075019_1073485713300006086WatershedsLREFISSRTRLWAVGGLWAGLLLSAFDLYAAVVTYIPQYAVRNDFRLIYGAAETGLHQGYAHLYDLSAQRTSVEGLGPGFYWS
Ga0075014_10020116013300006174WatershedsLFQYLRGRTRLWAAAGLWGGLLLLAFDVYAAAVTYIPQYPVRNDFRLMYGAALVGLRQGYGHLYDLAAQRSAVEGLGSGFYW
Ga0075014_10080228613300006174WatershedsVIRSAGLHDFVRGRTRLWAVGGLWAGFLLFVFDLYAAAVTYIPQYRVRNDFRLIYGAAETGLHLGYPHVYDLVAQQASVEGLGSGFYWSPYLNPPPLVWLATPFTLLPFTYAVVLWTVL
Ga0070712_10059988713300006175Corn, Switchgrass And Miscanthus RhizosphereVITFFRGRTRLWSVAGLWTGILLTVFNIYAAAVTYLPQFRVRNDFRLIYGAALTAWQQGYSHLYDLAAQKKAVEGLGAATYWSPYLNPPPL
Ga0070712_10190103123300006175Corn, Switchgrass And Miscanthus RhizosphereVDWRGFFESRRKLWAAAGLWGGILLIGFDVYAAVVTYIPQYRVRNDFRLMYGAAVDTLHNGYGHLYDLAAQKSAVEGLGSGFYWSPFLNPPPLVWLVT
Ga0066660_1029844513300006800SoilMWAAAGLWAGILLAAFNLYAAVTTYIPQHLVRNDFRLIYGAALNGWEHGYSRLYDLAAQKATVEGLQPGTYWSPFLNPPTLAWVATPFLGLPFDLALLLWTALL
Ga0079221_1152968813300006804Agricultural SoilLVAYVAERKRLWAVAGLWTGVLLTAFNLYAAFVTYIPQFLVRNDFRLMYGAALAAWNRGYSHLYDFAAQKSAVESLGAYWSPYLNPPPLAWLATPFLALPF
Ga0075434_10042400523300006871Populus RhizosphereVLAFFRRRTRVWAVAGVWTGLLLTAFNVYAAAVTYVPQFLIRNDFRLVYGAALSGWRNGYAHLYDLAAQKEAVESLGAYWSPYL
Ga0099793_1014785213300007258Vadose Zone SoilLEGYFRERTRLWAAAGLWGGILLTAFNLYAAATTYIPQFRVRNDFRLIYGTALAGWEHGYNHLYDLAAQKAAVEGLGQGTYWSPFLNPP
Ga0099794_1012733713300007265Vadose Zone SoilMDVVWSLTLDAYVRARTRLWAAAGLWGGLLLIGTDVYFAVVTYIPQYRVRNDFRLMYGAALTALHQGYSHLYDLAAQKQAVEGLGAGFYW
Ga0099829_1140576123300009038Vadose Zone SoilMDVVRSFTLDAYVRARTRLWAVAGLWGGLLLVGTDVYFAVVTYIPQYRVRNDFRLMYGAALTGLHQGYSHLYDLAAQKEAVEGLGAGF
Ga0099830_1036309013300009088Vadose Zone SoilLVSLATFEAYVRGRTRLWGAAGLWTGILLIGFDVYAAVVTYIPEYRVRNDFRLIYGAALTGLRDGYGHLYDLAAQKAAVDGLGTGFYWSPFLNP
Ga0099830_1098302023300009088Vadose Zone SoilLVWSLTLDAYVRARTRLWAAAGLWGGLLLIGTDVYFAVVTYIPQYRVRNDFRLMYGAALTGLHQGYSHLYDLAAQKQAVEGLGAGF
Ga0099830_1103571813300009088Vadose Zone SoilLSVIQYLRARTRLWGAAGLWAGILLIAFDLYAAAVTYIPQYQVRNDFRLIYGAALTALRHGYSHLYDLSAQKATVEGLGAGFYWSPFLNPPPIAWL
Ga0105240_1230051813300009093Corn RhizosphereVREFFVSRRRLWAVGGLWGGLLLAAFDVYAAVVTYIPQYAVRNDFRLMYGAALVTERHGYAHLYDLAAQQAAVQGLGAQFYYSPFINPPPLVWLVTPLTALPF
Ga0066709_10015999633300009137Grasslands SoilMCPSPYFLPAVVTYFRERTRLWAVAGVWTGALLSAFNLYAAVATYIPQFLVRNDFRLVYGAALNAWEHGYGHLYDLGGQKNTVEGL
Ga0066709_10042403223300009137Grasslands SoilVIRFLASRRKLWAFGGLALGLGLTALDVYFSILTYIPQYRIRNDFRLMYGTADLTLHQGYGHLYDLAAQKAAIENLGAGFYWSPFLNPPPLVWLVTPL
Ga0075423_1037601423300009162Populus RhizosphereMVEFLRRRTRLWAVAGLWTGVLLTAFNLYAAFVTYIPQYRVRNDFRLMYGAALNAWQHGYGYLYDFATQKTAVESLGAY
Ga0075423_1171557013300009162Populus RhizosphereLVEYFRARTRLWAAAGLWGGILLVAFDLYAAFTTYVPQYLVRNDFRLVYGSALDAWAHGYRNLYDLAGQKEAVESLGAYWSPFLNPPP
Ga0134109_1036008713300010320Grasslands SoilLVELLRTRTRLWAVAGIWTGVLLTAFNAYAAVVTYLPQFLVRNDFRLVYGAALNAWQHGYTHLYDLAEQKTAVESLGAYWSPFLNPPPLAW
Ga0134084_1024222423300010322Grasslands SoilLVVYFRERTRMWAAAGLWAGILLAAFNLYAAVTTYIPQHLVRNDFRLIYGAALNGWEHGYSRLYDLAAQKATVEGLQPGTYWSPFL
Ga0134086_1006756213300010323Grasslands SoilVLAFFRRRTRLWAVAGVWTGSLLTAFNVYAAAVTYVPQFLVRNDFRLVYGAALNAWQHGYGHLYDFAGQKAAVEGLGAYWSPFINPPPLAWL
Ga0134064_1003186423300010325Grasslands SoilLVQYFRERTRLWAAAGLWGGSLLLAFNLYAAIATYVPQYQVRNDFRLIYGAALNGWQNGYGHLYDLAAQKAVVESLGSGTYWSPYLNPPTLAWI
Ga0134064_1013888913300010325Grasslands SoilLPAVIGFFRARTRLWAVAGLWTGLLLTGFNVYAAAVTYVPEFRVRNDFRLIYGAALTAWKQGYSHLYDLDAQKRTVEGLGGGTYWSPFLNPPPLAWLATPFIV
Ga0134065_1030273013300010326Grasslands SoilLVELLRTRTRLWAVAGIWTGVLLTAFNAYAAVVTYLPQFLVRNDFRLVYGAALNAWQHGYTHLYDLAEQKTVVESLGAYWSP
Ga0134111_1009095823300010329Grasslands SoilLVVYFRERTRMWAAAGLWAGILLAAFNLYAAVTTYIPQHLVRNDFRLIYGAALNGWEHGYSRLYDLAAQKATVEGLQPGTYWSPFLNP
Ga0134111_1017687613300010329Grasslands SoilVAQPLFFACVIGFFRARTRLWAVAGLWTGLLLTGFNVYAAAVTYVPQFRVRNDFRLIYGAALTAWRQGYSHLYELEAQKRTVEGLGEGT
Ga0126379_1177353913300010366Tropical Forest SoilLSQWFGARKRLWAVAGLWTGLLLSAFNLYTAVVTYIPQFLVRNDFRLVYGAALNAWRHGYAHLYDLSSQRAAVESLGAYWSPFINPPPL
Ga0137392_1039272713300011269Vadose Zone SoilMADYMRERGRLWAVAGLWGGILLTAFNLYVAVTTYIPGYRVRNDFRLIYGAALVGWRYGYSHLYDLAAQKTVVEGLGPGTYWSPYLNPPPLAWLATPFT
Ga0137391_1049683313300011270Vadose Zone SoilMGPSPYFLGALVELFRRRTRLWAVAGVWTGLLLTAFNVYAAAVTYMPQFLVRNDFRLVYGAALNAWQHGYAHLYDFAGQKAAVEGLGAYWSPFLNPPPLAWLGTAFLPLPFDV
Ga0137391_1112380723300011270Vadose Zone SoilMDVVRSFTLDAYVRARTRLWAVAGLWGGLLLVGTDVYFAVVTYIPQYRVRNDFRLMYGSALTGLHQGYGHLYDLAAQKQAVEGLGAGFYWSPFLNP
Ga0137393_1053476713300011271Vadose Zone SoilLVWSLTIDAYVRARTRLWAVAGLWGGLLLIAIDVYFAVATYIPQYRVRNDFRLMYGAALTGLHQGYSHLYDLVAQKQAVEGLGAGFYWSPFLNP
Ga0137393_1085401013300011271Vadose Zone SoilMDVVRSFTLDAYVRARTRLWAVAGLWGGLLLVGTDVYFAVVTYIPQYRVRNDFRLMYGSALTGLHQGYGHLYDLAAQKQAVEGLGAGFYWS
Ga0153984_111545113300011401Attine Ant Fungus GardensLSALLEFLRSRTRLWAVAGLWCGLLLTAFNVYAAVVTYVPQFLVRNDFRLVYGAALNAWQDGYSHLYDLAGQKTAVESLGAY
Ga0137389_1093955613300012096Vadose Zone SoilLEGYFRERTRLWAAAGLWGGILLTAFNLYAATTTYIPQFRVRNDFRLIYGDALAGWEHGYNHVYDLAAQKAAVEGLGQGTYWSPFLNPPPLVWLATPFLA
Ga0137389_1126508613300012096Vadose Zone SoilLLAVVWSLPLDAYVRARTRLWAVAGLWGGLLLIAIDVYFAVVTYIPQYRVRNDFRLMYGAALTGLHQGYSHLYDLAAQKQAVEGL*
Ga0137388_1022285923300012189Vadose Zone SoilLVRLATFEAYVRGRTRLWAAAGLWTGILLIGFDVYAAAVTYIPEYRVRNDFRLIYGAALTGLHSGYGHLYDLSAQKASVDGLGPGFYWSPFLN
Ga0137388_1090021723300012189Vadose Zone SoilMDVVRSFTLDAYVRARTRLWAVAGLWGGLLLVGTDVYFAVVTYIPQYRVRNDFRLMYGSALTGQHHSSGNLYDQPPQKQAVE
Ga0137388_1204063713300012189Vadose Zone SoilLEGYFRERTRMWAAAGLWGGMLLTAFNLYAAATAYIPQFRVRNDFRLIYGAALAGWEHGYNHLYDLAAQKAAVEGLGQGTYWSPFLNPPP
Ga0137383_1078183323300012199Vadose Zone SoilLVEFFRRRTRLWAVAGIWTGLLLTAFNVFAAVVTYIPQYLVRDDFRLVYGAALVGRRDGYAHLYDLGAQKAAVESIGAYWSPY
Ga0137363_1083234313300012202Vadose Zone SoilVVWSLTLDAYVRARTRLWAAAGLWGGLLLIGVDIYVAVVTYIPQYRVRNDFRLIYGAALTGLHQGYGHLYDLAAQKQAVEGLVASFYWSPFLNPPPLTWLAIPLTILPFTAALI
Ga0137399_1100287313300012203Vadose Zone SoilLVQYFRERTRLWAAAGLWGGSLLLAFNLYAAIATYVPQYQVRNDFRLIYGAALNGWQNGYGHLYDLAAQKAVVEGLGSGTYWSPYLNPPTLAWIATPFLAMPFEA
Ga0137370_1063235613300012285Vadose Zone SoilMPALVDFLRTRTRLWSVAGLWTGLLLSGFNLYAAAVTYVPQFRVRNDFRLIYGSALTAWQQGYGHLYDLDAQQRTVEGLGAGTY
Ga0137386_1074697013300012351Vadose Zone SoilLSVVEYLRARSRLWGAAGLWAGFLLIAFDIYAAVVTYIPQYQVRNDFRLIYGAALTALRHGYSHLYDLSAQKATVEGLGSGFYWSPFLNPPPLVWLATPFTLLPFNV
Ga0137390_1086427413300012363Vadose Zone SoilLLDVVWALTLDRYVRARPRLWAVAGLWGGLLLIGVDIYVAVVTYIPQFRVRNDFRLIYGTALTGLQHGYSHLYDLAAQKQAVEGLGAGFYWSPFLNPPPLIWLVTPLTILSFTWALVVWT
Ga0137390_1179359723300012363Vadose Zone SoilLVWLSTFEAYVRGRTRLWSAAGLWAGVLLIGFDIYAATVTYIPEFRVRNDFRLIYGAALTGLHDGYGHLYDLTAQKASVEGLGPGFYWSPFLNPPPL
Ga0137390_1179590813300012363Vadose Zone SoilLVRLATFEAYVRGRTRLWGAAGLWTGILLIGFDVYAAAVTYISEYRVRNDFRLIYGAALTGLHSGYGHLYDLSAQKASVDGLGPGFYW
Ga0137395_1002108243300012917Vadose Zone SoilMDVVRSFTLDAYVRARTRLWAVAGLWGGLLLVGTDVYFAVVTYIPQYRVRNDFRLMYGAALTGLHQGYSHLYDLAAQKEAVEGLGAGFYWSPFLNPPPLVWLVTPLTMLPFTAALFVWT
Ga0137396_1103259113300012918Vadose Zone SoilMRSRTRLWSAAGLETGILLIGFDIYAALVTFVPEYLVRNDFRLIYGAALTGLQHGYNHLYDLSLQSQVAGSLGSGFY*
Ga0134078_1035370713300014157Grasslands SoilVLLTAFNAYAAVVTYLPQFLVRNDFRLVYGAALNAWQHGYSHLYDLAEQKTVVESLGAYWSPF
Ga0137420_117681413300015054Vadose Zone SoilLVQYFRERTRLWAAAGLWGGSLLLAFNLYAAIATYVPQYQVRNDFRLIYGAALNGWQNGYGHLYDLAAQKAVVESLGSGTYWSPYLNPPTLAWIATPFLA
Ga0137420_136938933300015054Vadose Zone SoilLVQYFRERTRLWAAAGLWGGSLLLAFNLYAAIATYVPQYQVRNDFRLIYGAALNGWQNGYGHLYDLAAQKAVVESLGSGTYWSPYLNPPTLAWIATPFL
Ga0182035_1089080123300016341SoilMRQRTRLWAAAGLWTGLLLIVFNLYSAVVEFIPQYRFRNDFRLIYGAALAAWTNGYGHLYDLTAQEAATDGLGSGFYWQPFINPPPLAWLATPFLA
Ga0134074_134704823300017657Grasslands SoilVAQPLFFACVIGFFRARTRMWAVAGLWTGLLLTGFNVYAAAVTYVPQFRVRNDFRLIYGAALTAWRQGYSHLYELDAQKRTVEGL
Ga0187821_1003676213300017936Freshwater SedimentVSRRRLWAVGGLWGGLLLAAFDAYAAIVTYIPQYAVRNDFRLMYGAALVTERQGYAHLYDLAAQQAAVRGLGPQFYYSPFINPPPLVWLVTP
Ga0187821_1028897023300017936Freshwater SedimentVVAFFASRRRLWAVGGLWGGLLLAAFDLYAAVVTYIPQYAIRNDFRLMYGAALVTERHGYPHLYDLPLQQAAVEGLGPGFYYSAFINPPPLVWLVTPF
Ga0193731_102175923300020001SoilLSVIQYLRARTKLWGAAGLWAGTLLIAFDLYAAAVTYIPQYRVRNDFRLIYGAALTALRHGYSHLYDLSAQKATVEGLGAGFYWSPFLNPPPLVWLATPFTLVPFN
Ga0210382_1005029423300021080Groundwater SedimentVIQYLRARTKLWGAAGLWAGTLLIAFDLYAAAVTYIPQYRVRNDFRLIYGAALTALRHGYSHLYDLSAQKATVEGLGAGFYWSPFLNPPPLVWLATPFTLVPFNVAIVLWTVFLLVA
Ga0210409_1055668613300021559SoilLVWLATFEAYVRARTRLWSAAGLWAGVLLIGFDVYAAVVTYIPEYRVRNDFRLIYGAALTGLHDGYGHLYDLAAQKTSVDGLGPGFYWSPFLNPPPLAWLATPLTVLPFNIAI
Ga0212123_1037541223300022557Iron-Sulfur Acid SpringVWLSTFEAYVQARTRLWAAAGLWAGLLLLGFDVYASIVTYIPGYRVRNDFRLLYGAALTGLHHGYDHLYDAMAQKAVVDGLGQGFYWSPFLNPPPLV
Ga0207665_1105327013300025939Corn, Switchgrass And Miscanthus RhizosphereVSRRRLWAVGGLWGGLLLAAFDVYAAVVTYIPQYAVRNDFRLMYGAALVTERHGYGHLYDLAAQQAAVQGLGPQFYYSPFINPAPLVWLVTPLTALPFSAAIILWTFLISAAAALAW
Ga0209236_125025813300026298Grasslands SoilMRPSPYFWPALVQYFRERTRLWAAAGLWGGSLLLAFNLYAAIATYIPQYQVRNDFRLIYGAALNGWQNGYGHLYDLAAQKAVVEG
Ga0209238_117099413300026301Grasslands SoilMWAAAGLWAGILLAAFNVYAAVTTYIPQHLVRNDFRLIYGAALNGWEHGYSRLYDLAAQKATVEGLQPGTYWSPFLNPPTLAWVATPFLGLPFDLALLL
Ga0209238_122633423300026301Grasslands SoilLPALVQYLRERTRLWSAAGLWAGLLLLGFNLYAASSTYVPEFRIRNDFRLIYGAALDAWTYGYGHLYDLTAQKAVVEGLGVGTYWSPFLNPPTLAWIA
Ga0209268_105842513300026314SoilMWAAAGLWAGILLAAFNLYAAVTTYIPQHLVRNDFRLIYGAALNGWEHGYSRLYDLAAQKATVEGLQPGTYWSPFLNPPTLAWVATPFLGLPFDLALL
Ga0209686_108827813300026315SoilVIRFLASRRKLWAFGGLALGLGLTALDVYFSILTYIPQYRIRNDFRLMYGTADLTLHQGYGHLYDLAAQEAAIENLGAGFYWSPFLNPPPLVWLVTPLTLLQFDLAVVVWTVLVLA
Ga0209686_111460723300026315SoilLVQYFRERTRLWAAAGLWGGSLLLAFNLYAAIATYVPQYQVRNDFRLIYGAALNGWQNGYGHLYDLAAQKAVVESLGSGTYWSPYLNPPTLAWIATPFLAMPFEAALFLWTLLIAGAALLAW
Ga0209687_107108723300026322SoilMRERGRLWAVGGLWAGVLLTAFNLYAAVTTYFPQYRVRNDFRLIYGAALDGWRYGYSHLYDLPAQKQVVEGLGPGTYWSPYLNPPPLAWLATPFLA
Ga0209801_123369713300026326SoilMRPSPYFWPALVQYFRERTRLWAAAGLWGGSLLLAFNLYAAIATYVPQYQVRNDFRLIYGAALNGWQNGYGHLYDLAAQKAVVESLGSGTYWSPYLNPPTLAWIATPFLAMP
Ga0209267_103262813300026331SoilMRPSPYFWPALVQYFRERTRLWAAAGLWGGSLLLAFNLYAAIATYVPQYAVRNDFRLIYGAALNGWQNGYGHLYDLAAQKAVVESLGSGTYWSPYLNPPTLAWIATPFLTM
Ga0209158_109064123300026333SoilVVWSLTLDAYVRARTRLWAAAGLWGGLLLIGVDIYVAVVTYIPQYRVRNDFRLIYGAALTGLHQGYGHLYDLAAQKQAVEGLGAGFYWSPFLNPPPLAWLVTPLTT
Ga0209159_1002382163300026343SoilMWAAAGLWAGILLAAFNLYAAVTTYIPQRLVRNDFRLIYGAALNGWEHGYSRLYDLAAQKATVEGLQPGTYWSPFLNPPTLAWVAT
Ga0209059_108545623300026527SoilLPALVQYFQERTRLWAAAGVWGGCLLFAFNLFAAIATYIPQYQVRNDFRLIYGAALDGWRNGYGHLYDLAAQKAAVESLGPGTYWSPYLN
Ga0209378_100114413300026528SoilLPALVQYLRERTRLWSAAGLWAGLLLLGFNLYAASSTYVPEFRIRNDFRLIYGAALDAWTYGYGHLYDLSAQKAVVEGLGVGTYWSPFLNP
Ga0209807_106387123300026530SoilVIRFLASRRKLWAFGGLALGLGLTALDVYFSILTYIPQYRIRNDFRLMYGTADLTLHQGYGHLYDLAAQKTAIENLGAGFYWSPFLNPPPLVWLVTPFTVLPFD
Ga0209376_134082223300026540SoilLVQYFRERTRLWAAAGLWGGSLLLAFNLYAAIATYVPQYQVRNDFRLIYGAALNGWQNGYGHLYDLAAQKAVVESLGSGTYWSPYLNPPTLAWIATPFLAMPFEAALFLWTL
Ga0209805_102355943300026542SoilLPALVQYFQERTRLWAAAGVWGGCLLFAFNLFAAIATYIPQYQVRNDFRLIYGAALDGWRNGYGHLYDLAAQKAAVESLGPGTYWSPYLNP
Ga0209648_1067125513300026551Grasslands SoilLVWLASFEGYVRARTRLWSAAGLWAGVLLIAFDVYAAAVTYIPEYRVRNDFRLIYGAAQTGLHDGYSHLYDLAAQKTSVEGLGPGFYWSPFLNPPPLAWLATPLTVLPFNIAVWVWTLLVVGALLL
Ga0209648_1072144423300026551Grasslands SoilLVWLSTFEAYVRGRTRLWSAAGLWAGVLLIGFDIYAAVVTYIPEFRVRNDFRLIYGAALTGLHDGYGHLYDLTAQKASV
Ga0209577_1009982623300026552SoilMWAAAGLWAGILLAAFNLYAAVTTYIPQHLVRNDFRLIYGAALNGWEHGYSRLYDLAAQKATVEGLQPGTYWSPFLNPPTLAWVATPFLGLPFDLALLLWTALLVGA
Ga0209577_1088143423300026552SoilMRERARLWAVGGLWAGVLLTAFNLYAAVTTYFPQYRVRNDFRLIYGAALDGWRYGYSHLYDLPAQKQVVEGLGPGTYWSPYLNPPPLAWLATPFLAMPFDTAVVL
Ga0209178_114386823300027725Agricultural SoilLQALLDFLRRRTRLWAVAGLWTGFLLTAFNVYAAVVTYVPQFLVRNDFRLVYGAALNASRHGYGHLYDLGQQKAAVESLGAYWSPFINPPPLAWLGTLFLPLP
Ga0208989_1021620323300027738Forest SoilVAGLWTGILLIVFDLYAALVIFIPEYQVRNDFRLMYGAARAVLQHGFSHLYDFEAQKAATEALAAGVYWQPFLNPPPLVWLAMPFTALPFGVAIWLWTALLVASALLAWYLTAPGDGL
Ga0209580_1063786623300027842Surface SoilVREYLQRRTRLWAAAGLWTGVLLTAFDLYAAVTTYIPEYRVRNDFRLVWGAAVAAWHGGYGHLYDLAAQKSATEALGSRFYWQPYLNPPPL
Ga0209701_1072357813300027862Vadose Zone SoilLLLIAFDIYAAVVTYIPQYRVRNDFRLVYGAALTGLRHGYSHLYDLVAQKHVVEGLGAGFYWSPFLNPPPLVWLATPFTVL
Ga0209283_1000543813300027875Vadose Zone SoilLVRLATFEAYVRGRTRLWAAAGLWTGILLIGFDVYAAAVTYIPEYRVRNDFRLIYGAALTGLHSGYGHLYDLSAQKASVDGLGPGFYWS
Ga0257175_103057823300028673SoilMSVYIRERPRLWAVAGLWTGILLTAFNLYAAVATYVPQFRVRNDFRLIYGAALDAWHNGYGHLYDLTAQKAAVEGLGQGTYWSP
Ga0307312_1011307213300028828SoilLSVIQYLRARTKLWGAAGLWAGTLLIAFDLYAAAVTYIPQYRVRNDFRLIYGAALTALRHGYSHLYDLSAQKATVEGLGAGFYWSPFLNPPPLVWLATP
Ga0307374_1037028623300031670SoilMVYLRERTRLWAVAGIWGGGLLAAFDVYAAVVTYIPGYRVRNDFRLIYGAALTALDRGFGHLYDLPAQKVAVEGLGHGFYWSPFLNPPPLVWLAAPF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.