Metagenome / Metatranscriptome Family F076372

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076372
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	94 residues
Representative Sequence	MHGSAQPEDRFPSASTEDTIAGTDKSSAVGAAGAVGDPSNGSRALEEAELDSALQLLVERAQYITGATGTALALPHGEEMVCRASA
Number of Associated Samples	104
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.78 %
% of genes near scaffold ends (potentially truncated)	97.46 %
% of genes from short scaffolds (< 2000 bps)	85.59 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.610 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (16.102 % of family members)
Environment Ontology (ENVO)	Unclassified (37.288 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.525 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.18% β-sheet: 0.00% Coil/Unstructured: 79.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01895	PhoU	36.44
PF02566	OsmC	2.54
PF00486	Trans_reg_C	1.69
PF02627	CMD	0.85
PF01381	HTH_3	0.85
PF13519	VWA_2	0.85
PF00665	rve	0.85
PF06751	EutB	0.85
PF01865	PhoU_div	0.85
PF13424	TPR_12	0.85
PF08281	Sigma70_r4_2	0.85
PF05048	NosD	0.85
PF00400	WD40	0.85
PF06835	LptC	0.85
PF02518	HATPase_c	0.85
PF10369	ALS_ss_C	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	2.54
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	2.54
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.85
COG1392	Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family	Inorganic ion transport and metabolism [P]	0.85
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.85
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.85
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.85
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.85
COG4303	Ethanolamine ammonia-lyase, large subunit	Amino acid transport and metabolism [E]	0.85
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.63 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	40.68 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.47 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.39 %
Unclassified	root	N/A	3.39 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.47 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.39 %
Unclassified	root	N/A	3.39 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.63 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3.39 %
Unclassified	root	N/A	3.39 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.68 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.24 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	3.39 %
Unclassified	root	N/A	3.39 %
Ralstonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia	0.85 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.68 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	3.39 %
Unclassified	root	N/A	3.39 %
unclassified Ralstonia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → unclassified Ralstonia	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.68 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	3.39 %
Unclassified	root	N/A	3.39 %
Ralstonia sp. GV074	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → unclassified Ralstonia → Ralstonia sp. GV074	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.68 %
Archangium gephyra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	3.39 %
Unclassified	root	N/A	3.39 %
Ralstonia sp. GV074	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → unclassified Ralstonia → Ralstonia sp. GV074	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001174\|JGI12679J13547_1006210	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300001356\|JGI12269J14319_10265773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	632	Open in IMG/M
3300004080\|Ga0062385_10265438	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	965	Open in IMG/M
3300004080\|Ga0062385_11128068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300004082\|Ga0062384_100037628	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300004091\|Ga0062387_100888337	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300004092\|Ga0062389_101302842	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300004092\|Ga0062389_104029679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300004635\|Ga0062388_100622385	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300005445\|Ga0070708_100343385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1407	Open in IMG/M
3300005557\|Ga0066704_10687949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300005591\|Ga0070761_10585777	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005602\|Ga0070762_10048080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2344	Open in IMG/M
3300005610\|Ga0070763_10160397	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300005712\|Ga0070764_10175084	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005947\|Ga0066794_10003223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4235	Open in IMG/M
3300006059\|Ga0075017_100467661	All Organisms → cellular organisms → Bacteria → Proteobacteria	953	Open in IMG/M
3300006059\|Ga0075017_100963601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	663	Open in IMG/M
3300006059\|Ga0075017_101201227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300006174\|Ga0075014_100444868	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300009038\|Ga0099829_11740019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300009090\|Ga0099827_10456148	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300009520\|Ga0116214_1278874	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	638	Open in IMG/M
3300009522\|Ga0116218_1077879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1511	Open in IMG/M
3300009623\|Ga0116133_1055233	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300009624\|Ga0116105_1156828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	606	Open in IMG/M
3300009637\|Ga0116118_1023356	All Organisms → cellular organisms → Bacteria	2307	Open in IMG/M
3300009643\|Ga0116110_1131648	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300009645\|Ga0116106_1038046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	1635	Open in IMG/M
3300009683\|Ga0116224_10108380	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300009700\|Ga0116217_10780446	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	589	Open in IMG/M
3300009760\|Ga0116131_1185618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300009839\|Ga0116223_10202857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300009839\|Ga0116223_10349402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300009839\|Ga0116223_10879988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300010339\|Ga0074046_10726757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300010341\|Ga0074045_10754654	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300010341\|Ga0074045_10881525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300010343\|Ga0074044_10164797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1480	Open in IMG/M
3300010343\|Ga0074044_10557226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300010379\|Ga0136449_101620226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300011120\|Ga0150983_10604857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300011269\|Ga0137392_10197690	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300011271\|Ga0137393_11150303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300011271\|Ga0137393_11302777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300012189\|Ga0137388_11018235	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300012199\|Ga0137383_11007068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300012203\|Ga0137399_11087328	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012205\|Ga0137362_10047590	All Organisms → cellular organisms → Bacteria	3480	Open in IMG/M
3300012363\|Ga0137390_10709382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300012363\|Ga0137390_11346651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300012917\|Ga0137395_10328053	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300012918\|Ga0137396_10926335	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300012925\|Ga0137419_10458111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300014200\|Ga0181526_10984264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	530	Open in IMG/M
3300014491\|Ga0182014_10647342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300014492\|Ga0182013_10592663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300017823\|Ga0187818_10004819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5754	Open in IMG/M
3300017935\|Ga0187848_10037462	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300017938\|Ga0187854_10057008	All Organisms → cellular organisms → Bacteria	1931	Open in IMG/M
3300017941\|Ga0187850_10030980	All Organisms → cellular organisms → Bacteria	2920	Open in IMG/M
3300017942\|Ga0187808_10467508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300017943\|Ga0187819_10261472	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300018003\|Ga0187876_1245606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300018006\|Ga0187804_10002607	All Organisms → cellular organisms → Bacteria	5471	Open in IMG/M
3300018019\|Ga0187874_10336775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300018022\|Ga0187864_10072932	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300018023\|Ga0187889_10067423	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300018023\|Ga0187889_10470314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300018026\|Ga0187857_10537532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300018030\|Ga0187869_10170944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300018033\|Ga0187867_10576861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300018037\|Ga0187883_10447040	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300018037\|Ga0187883_10769190	Not Available	503	Open in IMG/M
3300018038\|Ga0187855_10176877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1265	Open in IMG/M
3300018042\|Ga0187871_10518181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300018043\|Ga0187887_10032152	All Organisms → cellular organisms → Bacteria	3298	Open in IMG/M
3300018047\|Ga0187859_10140258	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300019888\|Ga0193751_1065059	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300020579\|Ga0210407_10017909	All Organisms → cellular organisms → Bacteria	5255	Open in IMG/M
3300021168\|Ga0210406_11261063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300021407\|Ga0210383_10952028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300021478\|Ga0210402_11030661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300021559\|Ga0210409_10322204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1391	Open in IMG/M
3300022724\|Ga0242665_10174386	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300025412\|Ga0208194_1023353	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300025414\|Ga0208935_1054011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300025477\|Ga0208192_1061984	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300025480\|Ga0208688_1000511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21195	Open in IMG/M
3300025500\|Ga0208686_1077065	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300026223\|Ga0209840_1002140	All Organisms → cellular organisms → Bacteria	4363	Open in IMG/M
3300026355\|Ga0257149_1032350	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300026498\|Ga0257156_1052005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300026557\|Ga0179587_11121878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300027591\|Ga0209733_1021185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1754	Open in IMG/M
3300027591\|Ga0209733_1099001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300027605\|Ga0209329_1055048	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300027643\|Ga0209076_1141473	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300027645\|Ga0209117_1027489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1796	Open in IMG/M
3300027676\|Ga0209333_1010710	All Organisms → cellular organisms → Bacteria	2753	Open in IMG/M
3300027678\|Ga0209011_1199941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300027857\|Ga0209166_10410892	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300027884\|Ga0209275_10100074	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300027903\|Ga0209488_11153914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300028800\|Ga0265338_10588626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300029993\|Ga0302304_10098924	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300030042\|Ga0302300_1186336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → unclassified Ralstonia → Ralstonia sp. GV074	585	Open in IMG/M
3300030058\|Ga0302179_10253903	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300030706\|Ga0310039_10231205	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300030760\|Ga0265762_1052365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300031711\|Ga0265314_10114494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1708	Open in IMG/M
3300031715\|Ga0307476_11275170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300031754\|Ga0307475_10218591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1525	Open in IMG/M
3300031962\|Ga0307479_11308724	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300033755\|Ga0371489_0252884	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.31%
Host-Associated	Host-Associated	1.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.47%
Aquatic	Environmental → Aquatic	39.83%
Plants	Host-Associated → Plants	1.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.08%
Freshwater	Environmental → Aquatic → Freshwater	36.44%
Sediment	Environmental → Aquatic → Sediment	3.39%
Peat	Environmental → Terrestrial → Peat	3.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.69%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	36.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.59%
Loam	Environmental → Terrestrial → Soil → Loam	11.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	22.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.02%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.24%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	16.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.41%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.24%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.54%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12679J13547_10062101	3300001174	Forest Soil	MHGSAQPEKEFASVREDSIAEVGPSSAVEADSQSAVANAGNNRRGLEENELDSTLQLLVERAQYITGATGTALALPHGEEMVCRASAG
JGI12269J14319_102657732	3300001356	Peatlands Soil	MPGSAQPEERFSPASAEDANAGTDRPSNVGAGVGPVGDPSNGSGVLAETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVQSGLTGESIARRQLLRCDN
Ga0062385_102654382	3300004080	Bog Forest Soil	MHGFAQPDPRSDERFTPASGGETSADDTSSGADRPASVSGGGDNSNGNRTLEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQV
Ga0062385_111280682	3300004080	Bog Forest Soil	MSASAQPEERVPSASVSEAGDATHRPLAVNAGGDSSNGNRLLGEQELDSALQLLVERAQYITGATGSALALPQGEEMVCRA
Ga0062384_1000376283	3300004082	Bog Forest Soil	MHGFAQPEDRIPSASADDLNAATGRSAATDAGSDHSNRSRELGDIELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGGSAPAVGVRLQ
Ga0062387_1008883372	3300004091	Bog Forest Soil	MHGSAQSDDRFPPASAEEASAGTDRHALAGAVNTNSDGSPVLEETELDSALQLLVERAQYITGATGTALALTRGEEMVCRASAGSSAPAVGSRLQVRS
Ga0062389_1013028421	3300004092	Bog Forest Soil	MHGFAQPDPRADDRFAQASDHIDAGADRPASVGGGGDNSNGNRTLEETELDSALQLLVERAQYITGATGTALALPQGEE
Ga0062389_1040296791	3300004092	Bog Forest Soil	MHGFAQPDPRSDERFTPASGGETSADDTSSGADRPASVSGGGDNSNGNRTLEETELDSALQLLVERAQYITGATGTALALPQGEE
Ga0062388_1006223852	3300004635	Bog Forest Soil	MHGFAQPDPRSDERFTPASGGETSADDTSSGADRPASVSGGGDNSNGNRTLEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVRSGLTGE
Ga0070708_1003433853	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNGSAQPEDRFPPASAENMAEETAGTEQSGPVGAVGGVGDRSNGSRALRETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQ
Ga0066704_106879491	3300005557	Soil	MNGSPQPEDRFPSADTEDTTAGTDQSSKVDDKSNGSRALEETELDSALQLLVERAQYITGATGTALAL
Ga0070761_105857772	3300005591	Soil	MHGSTQPEDQRFPTAGAKDTVTGGDFPPVRAAGTIGDRSNGNRTLAETELDTALQLLAERAQYITGATGIALALPQGEE
Ga0070762_100480803	3300005602	Soil	MHGSAQPEDQRFPSASAKDAIAEGNPPLVRVSGTIGDRSNGNRSLAETELESALQLLVERAQYITGATGTALALPQGDEM
Ga0070763_101603972	3300005610	Soil	MHGSAQPEDRLEPSSSEEASAGAIGSAGDSSNGSRLLADTELESALQLLVERAQYITGATGTALALPQGDEMVCRASAGSSAPAVGARLQVRSGLTGESIARQQLLRCDNAEADP
Ga0070764_101750841	3300005712	Soil	MYGSAQPDPRPDDRFASASDDSNAGVDRPTSVGGGGDNSNGNRTLEETELDSALQLLVERAQYITGATGTALALPQ
Ga0066794_100032236	3300005947	Soil	MHGSTQPEEAFPSANAADTTTGTGPTSSVSVDPAGAVGGRSNGSRGLEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASA
Ga0075017_1004676611	3300006059	Watersheds	MHGPPGPEGRLPPVTGEDALPQLNQDSTAGLVRDRSNGSGAALAETELDSALQLLVERAQYITGATGTALALPRGEEMVCRASAGSSAPGVGARLQVRSGL
Ga0075017_1009636012	3300006059	Watersheds	MPGSAGPEDRFPPANAENAMTEGNQASRAGVIDPTRDQSNGSRGLAETELDSALQLLVERAQYITGATGTALALPDGEEMVCRASAGSSAPAVGARLQV
Ga0075017_1012012271	3300006059	Watersheds	MHGSAEPEDQFPSASTEDATAGTDRSSAIGSGGNNSNGNRVLEETELDSALQLLVERAQYITGATGTALALPRGEEMVCRASAGSSAPAIGARLQ
Ga0075014_1004448681	3300006174	Watersheds	MQGFAQPEDQSRSATAEGAIARAEQPATGSVADRSDRNMRLEGTELDSALQLLVERAQYITGATGAALALPQGNEMVCRASAGSSAP
Ga0099829_117400191	3300009038	Vadose Zone Soil	MHGSAQPEEGFPAGNTAETATGTGPISSVSVDPAGAVGDKSNGSRALGETELDSALQLLVERAQYITGATGTALALPQGEEMVC
Ga0099827_104561482	3300009090	Vadose Zone Soil	MQGSAQPEDRFPAGSSTEDATEDTIAATDQSPAAGTVGDNSNGNRTLEETELDSALQLLVERAQYITGATGTALALPQ
Ga0116214_12788741	3300009520	Peatlands Soil	MHQSAQPENLFPGAEDGIAGRSAAGDKSNGSPVLEETELDSALQLLVERAQYITWATGTALALPQGEEMVCRASAGASAPAVGARLQVRSGLTGESISRRQLLRCDN
Ga0116218_10778791	3300009522	Peatlands Soil	MHGSPQPEDRFPSGSTEDTTAGTDRSSSIADKSNGSRALEETELDSALQLLVERAQYITGATGTALALPRGEEMVCRASAGASAPAVGARLQVRSGLTGESIARRQ
Ga0116133_10552332	3300009623	Peatland	MHESAQPGDPFPTANAEDTIAGTARSSVAGAVGAVGDNSNGSRTLEEKELDSALQLLVERAQYITGATGTALALPRGEEMVCRAS
Ga0116105_11568281	3300009624	Peatland	MLGSAQPDDRLASASSEDTSVEAAGSAGKPSIGGPSVGDRSNGNLALDETELDSALQLLVERAQYITGATGTALALPQGDEMVCRASAGSSAPAVGARLQVRSGLTGESISR
Ga0116118_10233561	3300009637	Peatland	MHGSAQPEDRFPPASTGDTSAGTDQSSAAGAVVPDGAVGDNSNGSRTLGETELDSALQLLVERAQYITGATGTALALPQGEEMV
Ga0116110_11316481	3300009643	Peatland	LLKRGFDSNSMHGSDQPEDSFPSPSTEDTTAETGQSSAAGAVGAVRARGDNSNGRRVLEETELDSALQLLVERAQYITGATGTALA
Ga0116106_10380462	3300009645	Peatland	MHEFAQPGDPFPTANAAETITGTDRSSVAGAVGVVGAVGDNSNGSRALDERELDSALQLLVERAQYITGATGTALALPRGEEM
Ga0116224_101083801	3300009683	Peatlands Soil	MHESAQPEDRFPSASAEDTIAGTDRSSTDQSSAVGAAGAVGDNSNGSRALEETELDSALQLLVERAQYITGATGTA
Ga0116217_107804461	3300009700	Peatlands Soil	MHGSTQPEEGFPAANTGDTITRTDRSSSVDPVGAAGDKANGGRALEEAELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVRSGLTGESIARRQLLRCDNAESDP
Ga0116131_11856181	3300009760	Peatland	MHGSAQPEDRFPSASTEDTIAGTDKSSAVGAAGAVGDPSNGSRALEEAELDSALQLLVERAQYITGATGTALALPHGEEMVCRASA
Ga0116134_11209671	3300009764	Peatland	MAMQGSPHPEDRFPPASTESARAGTDRLASGGSAGAVGGPFAGSRVLEETELDSALQLLVERAQYITGAT
Ga0116223_102028571	3300009839	Peatlands Soil	MHQSAQPENLFPGAEDGIAGRSAAGDKSNGSPVLEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGASAPAVGARLQVRSG
Ga0116223_103494022	3300009839	Peatlands Soil	MPGSPQPEDRFPSGSTEDTTAGTDRSSSIADKSNGSRALEETELDSALQLLVERAQYITGATGTALALPRGEEMVCRASAGASAPAVGARLQARSRVTGFHCSRRSIRNGRAGAASRPALNPPR
Ga0116223_108799881	3300009839	Peatlands Soil	MPGSAQPEERFSPASAEDANAGTDRPSNVGAGVGPVGDPSNGSGVLAETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGA
Ga0074046_107267572	3300010339	Bog Forest Soil	MHGSAQPEDGFPSASAGDTAAGTDQTSSAGAAGAVGGKSNASRSLGETELDAALQLLVERAQYITGA
Ga0074045_107546541	3300010341	Bog Forest Soil	MHQSSQPEDRFPSAGAEDATGPTDRPSSGGEGGDNSNGKRALGETELDSALQLLVERAQYITGATGASLAVPHGEEMVCRASAG
Ga0074045_108815251	3300010341	Bog Forest Soil	MHGSAQPDPRSDPRPDDGFAPASDDTSSGADRPASVGGGGDNSNGNRTLEETELDSALQLLVERAQYITGATGTALALPAGEEMVCRASAGSSAPAVGARLQVRSGLTGE
Ga0074044_101647972	3300010343	Bog Forest Soil	MHESAEPEDRFPSASSEGAVSDKSAGHALQETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGASAPAVGARLQVRSGLTGE
Ga0074044_105572262	3300010343	Bog Forest Soil	MHGSAQSDDRFPPASAEEASAGTDRHALAGAVNTNSDGSPVLEETELDSALQLLVERAQYITGATGTALALTRGEEMVCRASAGSSAPAVGSRLQVRSGLTGESISRRQLLRCDNAE
Ga0136449_1016202261	3300010379	Peatlands Soil	MPGSPQPEDRFPSGSTEDTTAGTDRSSSIADKSNGSRALEETELDSALQLLVERAQYITGATGTALALPRGEEMVCRASAGASAPAVGARLQVRSGLTGESIARRQLLRCDNAETDP
Ga0150983_106048571	3300011120	Forest Soil	MNGSAQPEDRFPAGSTGDTTVGTDRAGTDRPASVGAGGDNSNGSRAFGGTELDSALQLLVERAQYITGATGTALALSQGEEMVCRASAGSSAPAV
Ga0137392_101976903	3300011269	Vadose Zone Soil	MNGSAQPEDRFPPPSAENTAVETTAGTEQSIPVGAVGDNSNGSRALGETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGA
Ga0137393_111503032	3300011271	Vadose Zone Soil	MHGSAQPEEGFPAGSTEDATEDTIAATDQSSAVGAAGAVGDKSNGSRALEETELDSALQLLVERAQYITGATGTALALPQGEEM
Ga0137393_113027771	3300011271	Vadose Zone Soil	MHGSAQPEDPILPAGTQDTAAGTDRSSDTPPDQPLDQPSAGDAVADNSNGSRALAETELDAALQLLVERALYITGATGTALALPQGEEMVCRASAGSSAPA
Ga0137388_110182352	3300012189	Vadose Zone Soil	MQGSAQPEDRFPAGSTEDATEETIAATDQSPAVGAVGDNSNGNRALEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVSSGLTGES
Ga0137383_110070682	3300012199	Vadose Zone Soil	MQGSAQPEDRFPAGSTEDATEDTIAATDQSSAIGAMGGVGDKSNGSRALEELELDSALQLLVERAQYITGATGTALALPQGEEMVC
Ga0137399_110873282	3300012203	Vadose Zone Soil	MQGSAQPEDRFPAGSTEEATEDMIEATDQSPAAGSVGDNSNGSRTLEETELDSAQQLLVERAQYITRATGTALALPQ
Ga0137362_100475904	3300012205	Vadose Zone Soil	MHGSAQPEDPILPAGTQDTAAGTDRSSDTPPDQPLDQPSAGDAVADNSNGSRALAETELDAALQLLVERALYITGATGTALALPRGEEMVCRASAGSSAPAVGARLQVRSGLTGESISRRQLL
Ga0137390_107093822	3300012363	Vadose Zone Soil	MNGSAQPEDRFPPPSAENTAVETTAGTEQSIPVGAVGDNSNGSRALGETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVRSGLTGES
Ga0137390_113466511	3300012363	Vadose Zone Soil	MHGSAQPEDPILPAGTQDTVAGTDRSSDQPLDQPSAGDAVVDNSNGSRALAETELDAALQLLVERALYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVSSGL
Ga0137395_103280531	3300012917	Vadose Zone Soil	MQGSAQPEDRFPAGSTEDATEDTIAATDQSHAAGAVGDNSNGNRTLEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVRSGLTGESI
Ga0137396_109263351	3300012918	Vadose Zone Soil	MQGSAQPEDRFPAGSTEDATEDTIAASDQSPAAGAVGDNSNGNRTLEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVRSGLTGESIA
Ga0137419_104581111	3300012925	Vadose Zone Soil	MCWPKIGWNNNFMNGSAQPEDRFPAGSTEEATEDMIEATDQSPAAGSVGDNSNGSRTLEETELDSALQLLVERAQYIT
Ga0181526_109842641	3300014200	Bog	MYGSAQPEETSGNAADLVAGADRPSAGKASDRSNGNQTLAETELDSALQLLVERAQYITGATGTALALPQGDEMVCRASAGSSAPAVGARLQVRSGLTGESIARRQLLRCDNAE
Ga0182014_106473421	3300014491	Bog	MHGSARPEDRFPPASTEDTVAGTDPSSAVAGAVGSVDDRSNGSRSLGETELDPALQLLVERAQYITGATGTALALPQGEEMVC
Ga0182013_105926631	3300014492	Bog	MHGSARPEDRFPPASTDDAVAGTDPSSAAVGAVGSVGERSNGSRSLGETELDPALQLLVERAQYITGATGTALALPQGEEMVCRASAGASA
Ga0187818_100048191	3300017823	Freshwater Sediment	MHGSTQPEDVFPSTNAADTTTGTGPTSSVSASADPAGAVGGRSNGSRGLEETELDSALQLLVERAQYITGATGTALALPQGEQMVCRASAGSSAPAVGARLQVR
Ga0187848_100374621	3300017935	Peatland	MQGAAHPEDRFPPASAENVSVGRDRPSSVGSAGVVGDPSNGSSTLAETGLDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVRSGLTG
Ga0187854_100570081	3300017938	Peatland	LDSNFMHGSAQPEDGFPPASTEDTIAGTDQPSAVGAAGAVGDPSHGSRALEGTELDSALQLLVDRAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQ
Ga0187850_100309804	3300017941	Peatland	MHESAQPGDPFPTANAEDTIAGTARSSVAGAVGAVGDNSNGSRTLEEKELDSALQLLVERAQYITGATGTALALPRGEEMVCRA
Ga0187808_104675082	3300017942	Freshwater Sediment	MHESTQPEEVFPSANTGGTSTGTGRSSSLDPGGAVGAKSNGSRVLEEAELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGVSAPAVGVRLQVRSG
Ga0187819_102614721	3300017943	Freshwater Sediment	MHGSTQPEDRIPSASAEDTIAGPSQSSGGAVHDNSNGSRALEEAELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGASAPAVGARLQVRSGLTGESIGRRKLLR
Ga0187876_100261512	3300018003	Peatland	MHGSAEPEDQLPSASTEETRTGTDRSSSVGSAGVVGERSNGSRAFEETELDSALQLLVERAQYITG
Ga0187876_12456062	3300018003	Peatland	MHGSARPEDRFPPASTEDTVAGTDPSSAGVGAVVGAVGSVDDRSNGSRSLGETELDPALQLLVERAQYITGATGTALALPQGEEMVCRASAGASAPAVGAR
Ga0187804_100026071	3300018006	Freshwater Sediment	MHGSTQPEDRIPSASAEDTIAGPSQSSGGAVHDNSNGSRALEEAELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGASAPAV
Ga0187866_11300821	3300018015	Peatland	MHGSAEPEDQLPSASTEETRTGTDRSSSVGSAGVVGERSNGSRAFEETELDSALQLLVERAQYITGATGTALA
Ga0187874_103367751	3300018019	Peatland	MHGSARPEDRFPPASTEDTIAGTDPSSAVVGAVGSVDDRSNGSRSLGETELDPALQLLVERAQYITGATGTALALPQGEEMVCRASAGASAPAVGARLQVQSGLTGESIARRQLLRCDN
Ga0187864_100729323	3300018022	Peatland	MHGSAQPEDRFPPASTGDTSAGTDQSSAAGAVVPDGAVGDNSNGSRTLGETELDSALQLLVERAQYITGATGTALALPQGEEMVCRA
Ga0187889_100674231	3300018023	Peatland	MHGSAQPEDRFPPASTGDTSAGTDQSSAAGAVVPDGAVGDNSNGSRTLGETELDSALQLLVERAQYITGATGTALALPQGEEMVCRAS
Ga0187889_104703141	3300018023	Peatland	MHESAQPGDPFPTANAEDTIAGTARSSVAGAVGAVGDNSNGSRTLEEKELDSALQLLVERAQYITGATGTALALPRGEEMVCRASAG
Ga0187857_105375322	3300018026	Peatland	MHGSARPEDRFPPASTEDTVAGTDPSSAVVGAVGSVGDRSNGSRLLEETELGSALQLLVERAQYITGATGTALALAQGEEMVCRASAGSS
Ga0187869_101709442	3300018030	Peatland	MHGYAQPEDLFPSANGEDRVTGAGAVGDNSNGNRVFEEKELDSALQLLVERAQYITGATGAALALPRGEEMVCRASAGSSAPGVGARLQVRSGLTGESISRRQL
Ga0187867_105768611	3300018033	Peatland	MRGTSQPGDPFPSAEDTTAGTDRSSVAGAVGAVGDNSNGSRALEDAELDSALQLLVERAQYIT
Ga0187883_104470401	3300018037	Peatland	MHESSQPEDLFPSANAEETASAGTDQSSAEGAVGSVGVVADNSNGSRTLAETELDSALQLLVERAQYITGATGTALALLRGEEMV
Ga0187883_107691901	3300018037	Peatland	MHEFAQPGDPFPTANAAETITGTDRSSVAGAVGVVGAVGDNSNGSRALDERELDSALQLLVERAQYIT
Ga0187855_101768771	3300018038	Peatland	MQGAAHPEDRFPPASAENVSVGRDRPSSVGSAGVVGDPSNGSSTLAETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQV
Ga0187871_105181812	3300018042	Peatland	MHESAQPGDPFPTANAEDTIAATDPSSVAGAVGAVGDNSNGSRALDERELDSALQLLVERAQYITGATGTALALPRGEEMVCRASAGTSAPAV
Ga0187887_100321521	3300018043	Peatland	MHESAQPGDPFPTANAEDTIAGTARSSVAGAVGAVGDNSNGSRTLEEKELDSALQLLVERAQYITGATGTALALPRGEEMVCRASAGTSAPAVGARLQVRSGLTGESIARRQ
Ga0187859_101402582	3300018047	Peatland	MHGSAQPEERLPSANPEDAAGARLSNPAGNSADAERPLEEAELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAIGSRLQVRSGLTGESVARRQLLRCD
Ga0193751_10650591	3300019888	Soil	MNGSAQPEDRFPAANTEDATEDMIAGRDQSAAVGADGGVGDNSNGSRALGETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVRSGLTG
Ga0210407_100179094	3300020579	Soil	MHGSAQPEDQFPAAGADDTTAGTDRAASGGAGGDSSNGNRTLAETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAP
Ga0210406_112610632	3300021168	Soil	MNGSAQPEDRFPAGSTGDTTRGTDRAGTDRPASVGPGGDNSNGSRAFGEAELDSALQLLVERAQYITGATGTALALPQGEEMVCHASAGSSAPAVGARLQVRSGLTGESIARRQLLRC
Ga0210383_109520281	3300021407	Soil	MHGSAQPEDRLEPSSSEEASAGAIGSAGDSSNGSRLLADTELESALQLLVERAQYITGATGTALALPQGDEMVCRASAGSSAPAVGARLQVRSGLTGESIARQQLLRCDNAEA
Ga0210402_110306612	3300021478	Soil	MNGSAQPEDRFPAGSTEDATEDMIAAKDQSAAVDAGGGVGDKSNGSRALGETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPA
Ga0210409_103222041	3300021559	Soil	MHGSAQPEDRLEPDRLEQTTSDERSAGPLGSDSDLTNGNRVLADTELDSALQLLVDRAQYITGATGAALALPQGDEMVCRASAGASAPSVGARLQVRSGL
Ga0242665_101743861	3300022724	Soil	MNGSAQPEHRFPAGSTEDATEDMIAAKDQSVVVGAGGGVGDNSNGSRALGETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGSRLQVRSGLTGESIARRQLLR
Ga0208194_10233531	3300025412	Peatland	MHESAQPGDPFPTANAEDTIAGTARSSVAGAVGAVGDNSNGSRTLEEKELDSALQLLVERAQYITGATGTALALPRGEEMVCRASA
Ga0208935_10540111	3300025414	Peatland	MLGSAQPDDRLASASSEDTSVEAAGSAGKPSIGGPSVGDRSNGNLALDETELDSALQLLVERAQYITGATGTALALPQGDEMVCRASAGSSAPAV
Ga0208192_10619841	3300025477	Peatland	MHESAQPGDPFPTANAEDTIAGTARSSVAGAVGAVGDNSNGSRTLEEKELDSALQLLVERAQYITGATGTA
Ga0208688_10005111	3300025480	Peatland	MHGSAEPEDQLPSASTEETRTGTDRSSSVGSAGVVGERSNGSRAFEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVRSGLTGESISRRQLLHCDNAETD
Ga0208686_10770652	3300025500	Peatland	MHESAQPGDPFPTANAEDTIAGTARSSVAGAVGAVGDNSNGSRTLEEKELDSALQLLVERAQYITGATGTALALPRGDEMVCRASAGTSAP
Ga0209840_10021401	3300026223	Soil	MHGSAQPENPFPSASAQDTIAGTDQTSDQSSAVGAVGDKSNGSRALDETELDSALQLLVERAQYITGATGTALALARG
Ga0257149_10323501	3300026355	Soil	LNPFAMNGSAQPEDRFPAGSTEDATEDTIAATDQSPAVGAVGGVGDKSNGSRTLEETELDSALQLLVERAQY
Ga0257156_10520051	3300026498	Soil	MNGSAQPEDRFPAGSTEDATEDMIAAKDQSAAVGAGGGVGDKSNGSRAFGETELDSALQLLVERAQYITGATGT
Ga0179587_111218781	3300026557	Vadose Zone Soil	MQGSAQPEDRFPAGSTEDATEDTIAATDQSPAAGAVGDNSNGNRTLEETELDSALQLLVERAQYITGATGTALALPQGEEM
Ga0209733_10211853	3300027591	Forest Soil	MNGSAQPEDRFPAGSTEGATEDTIAATDQSSAGGAVGGVGAKSNGSRALEEMELNSALQLLVERAQYITGATGTALALPQGE
Ga0209733_10990012	3300027591	Forest Soil	MNGSAQPEDRFPAGSTEDPTEDTITAADPSSAVGAVGGVGDKSNGSRALGETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVRSGLTGE
Ga0209329_10550482	3300027605	Forest Soil	MNGSAQPEDRFPAGSTGDTTVGTDRAGTDRPASVGAGGDNSNGRHAFGETELDSALQLLVERAQYITGATGTALALPQGEE
Ga0209076_11414731	3300027643	Vadose Zone Soil	MNGSAQPEDRFPAGSTEDATEDTIAATDQPSVGALGGVADKSNGSRALEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVG
Ga0209117_10274892	3300027645	Forest Soil	MHGSSQPEEAFRSANAAGTTTGTGPTSSVSANPVGAVGGRSNGSRGLEEGELDSALQLLVERAQYITG
Ga0209333_10107101	3300027676	Forest Soil	MHGSTQPEDQRFPTAGAKDTVTGGDFPPVRAAGTIGDRSNGNRTLAETELDTALQLLVERAQYITGATGIALALPQGEEMVCHAS
Ga0209011_11999411	3300027678	Forest Soil	MQGYAQPEDRFPAGSAEDATEDMIEDTIEDTITPTDQSSAVGAGGDNSNGSRALGETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPAVGARLQVRSGLTGESIA
Ga0209166_104108921	3300027857	Surface Soil	MHGSAQPEEGFPPASGEETTARTSPSSGVGAAVGAAGAGREKANGSRGLDEAELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGS
Ga0209275_101000741	3300027884	Soil	MHGSAQPEDQRFPSASAKDAIAEGNPPLVRVSGTIGDRSNGNRSLAETELESALQLLVERAQYITGATGTALALPQGDEMVCRASAGSSAPPIGARLQVRSGLTGESIARRQLLRCDNAE
Ga0209488_111539142	3300027903	Vadose Zone Soil	MQGSAQPEDRFPAGSTEDATEDTIAATDQSPAVGAVGDNSNGNRALEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASA
Ga0265338_105886261	3300028800	Rhizosphere	MQGLAQPEDRFPLTGAEDSAAGADRPAVLGTVGDRSNGSGRLEETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGASAPAVGARLQV
Ga0302304_100989241	3300029993	Palsa	MSGSAQPEDRIPPVNVAGAMAAREENFSAGVVSSGGGMLAETELDAALQLLVERAQYITGATGTALALPQGDEMVCRASAGLSAPAVGARLQVRSGLT
Ga0302300_11863361	3300030042	Palsa	MSGSAQPEDRIPPVNVAGAMAAREENFSAGVVSSGGGMLAETELDAALQLLVERAQYITGATGTALALPQGDEMVCRASAGLSAPAVGARLQVRS
Ga0302179_102539032	3300030058	Palsa	MSGSAQPEDRIPPVNVAGAMAAREENFSAGVVSSGGGMLAETELDAALQLLVERAQYITGATGTALALPQGDEMVCRASAGLSAPAVGARLQVRSGLTGESIARRQLLRCDNA
Ga0310039_102312051	3300030706	Peatlands Soil	MHGSPQPEDRFPSGSTEDTTAGTDRSSSIADKSNGSRALEETELDSALQLLVERAQYITGATGTALALPRGEEMVCRASAGASAPAVGARLQVRSGLTGESIARRQLLRCDNAETDP
Ga0265762_10523652	3300030760	Soil	MQGSAQPEDQRLPSAGVKDTMTGSEFPMVRATGTIGDRSNGNRTLAETELDAALQLLVERAQYITGATGSALALPLGEEMVCRASAGASAPPIGARLQVRSGLTGESIVRRQLLRCDNA
Ga0265314_101144943	3300031711	Rhizosphere	MHGSVQPEDRFPPATPGNVIAGTDRSSDGAAEAVGPIEVAADKSTKSRSLEETELDSALQLLVERAQYITGATGTALALPHGDEMVCRASAGSSAPAVGASLQVRSGLTGESIARRQLLRCDNAEAD
Ga0307476_112751702	3300031715	Hardwood Forest Soil	MQGSAQPEDRFPSTSAGDTSAENTTSGTDRRVSHGAGGDNSNGSRALGETELDSALQLLVERAQYITGATGTALALPQGEEMVCRASAGSSAPPIGARLQVRSGLTGESIARRQLLRCDNAE
Ga0307475_102185912	3300031754	Hardwood Forest Soil	MNGSAQPEDRFPAGSTEGATEDTIAATDQSSAIGAVGEVGDKSNGSRALEEMELDSALQLLVERAQYI
Ga0307479_113087241	3300031962	Hardwood Forest Soil	MNASAQPEDRFPAGTTEGATEDTIAATDQSPAVGAVGGVGDKSNGSRALEETELDSALQLLVERAQY
Ga0371489_0252884_3_203	3300033755	Peat Soil	MHGSPQPEDGFPSASTEDTIARRGQSFAVGAVGAAGAVGDRSNGRRALEEMELDAALQLLVERAQYI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076372

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences