Metagenome Family F076368

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076368
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	73 residues
Representative Sequence	MSYVVHVTMTEEEEAQQKPALGVKVHVEGKYEYKNLEIAREAAEVACHAAEKLHPSRTKTIDDDDWTGHPDRSD
Number of Associated Samples	84
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.90 %
% of genes near scaffold ends (potentially truncated)	16.95 %
% of genes from short scaffolds (< 2000 bps)	79.66 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.932 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (16.102 % of family members)
Environment Ontology (ENVO)	Unclassified (31.356 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.186 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.53% β-sheet: 17.65% Coil/Unstructured: 58.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF13211	DUF4019	28.81
PF00374	NiFeSe_Hases	28.81
PF09364	XFP_N	8.47
PF13510	Fer2_4	1.69
PF00326	Peptidase_S9	1.69
PF01058	Oxidored_q6	1.69
PF13469	Sulfotransfer_3	1.69
PF13356	Arm-DNA-bind_3	0.85
PF07992	Pyr_redox_2	0.85
PF13620	CarboxypepD_reg	0.85
PF00149	Metallophos	0.85
PF13432	TPR_16	0.85
PF07238	PilZ	0.85
PF03720	UDPG_MGDP_dh_C	0.85
PF01257	2Fe-2S_thioredx	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0374	Ni,Fe-hydrogenase I large subunit	Energy production and conversion [C]	28.81
COG3259	Coenzyme F420-reducing hydrogenase, alpha subunit	Energy production and conversion [C]	28.81
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	1.69
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	1.69
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	1.69
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	1.69
COG1905	NADH:ubiquinone oxidoreductase 24 kD subunit (chain E)	Energy production and conversion [C]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.93 %
All Organisms	root	All Organisms	44.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.93 %
cellular organisms	root	All Organisms → cellular organisms	44.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.93 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.39 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.54 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.54 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.54 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.69 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.85 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.85 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.93 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.69 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.85 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.85 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.85 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.93 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	1.69 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.85 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.85 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.85 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.93 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1.69 %
Granulicella sp. L56	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L56	0.85 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.85 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.85 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001417\|JGI20196J14858_1003266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1421	Open in IMG/M
3300003219\|JGI26341J46601_10056742	Not Available	1211	Open in IMG/M
3300003219\|JGI26341J46601_10056760	Not Available	1211	Open in IMG/M
3300003369\|JGI24140J50213_10086932	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300003369\|JGI24140J50213_10171622	Not Available	685	Open in IMG/M
3300003369\|JGI24140J50213_10209816	Not Available	605	Open in IMG/M
3300004080\|Ga0062385_10795379	Not Available	618	Open in IMG/M
3300004091\|Ga0062387_100009091	All Organisms → cellular organisms → Bacteria	3546	Open in IMG/M
3300004092\|Ga0062389_100498506	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300004152\|Ga0062386_100197765	Not Available	1581	Open in IMG/M
3300004152\|Ga0062386_100373997	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300004152\|Ga0062386_100386136	Not Available	1126	Open in IMG/M
3300004152\|Ga0062386_100470707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	1018	Open in IMG/M
3300004152\|Ga0062386_100602014	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005602\|Ga0070762_10587453	Not Available	738	Open in IMG/M
3300005764\|Ga0066903_104778501	Not Available	720	Open in IMG/M
3300005944\|Ga0066788_10197120	Not Available	522	Open in IMG/M
3300005994\|Ga0066789_10132715	Not Available	1062	Open in IMG/M
3300006052\|Ga0075029_100033017	All Organisms → cellular organisms → Bacteria	2948	Open in IMG/M
3300006052\|Ga0075029_100109696	Not Available	1665	Open in IMG/M
3300006052\|Ga0075029_100202710	All Organisms → cellular organisms → Bacteria → Proteobacteria	1239	Open in IMG/M
3300006052\|Ga0075029_100209446	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300006052\|Ga0075029_100263199	Not Available	1092	Open in IMG/M
3300006055\|Ga0097691_1000042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	113840	Open in IMG/M
3300006055\|Ga0097691_1042817	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300006055\|Ga0097691_1053815	All Organisms → cellular organisms → Bacteria → Proteobacteria	1378	Open in IMG/M
3300006059\|Ga0075017_100456600	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300006162\|Ga0075030_101364922	Not Available	555	Open in IMG/M
3300006174\|Ga0075014_100799595	Not Available	557	Open in IMG/M
3300006174\|Ga0075014_100878896	Not Available	535	Open in IMG/M
3300006642\|Ga0075521_10037099	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300006642\|Ga0075521_10096616	Not Available	1351	Open in IMG/M
3300006642\|Ga0075521_10157794	Not Available	1066	Open in IMG/M
3300010048\|Ga0126373_10139928	Not Available	2288	Open in IMG/M
3300010230\|Ga0136236_1036468	Not Available	553	Open in IMG/M
3300010339\|Ga0074046_10001494	All Organisms → cellular organisms → Bacteria	21057	Open in IMG/M
3300010339\|Ga0074046_10170632	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300010339\|Ga0074046_10322086	Not Available	946	Open in IMG/M
3300010341\|Ga0074045_10135983	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300010361\|Ga0126378_11320657	Not Available	816	Open in IMG/M
3300010366\|Ga0126379_10238427	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300010376\|Ga0126381_100217056	Not Available	2568	Open in IMG/M
3300010376\|Ga0126381_100498571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1717	Open in IMG/M
3300010376\|Ga0126381_100509886	Not Available	1698	Open in IMG/M
3300010379\|Ga0136449_100155907	All Organisms → cellular organisms → Bacteria	4464	Open in IMG/M
3300010398\|Ga0126383_10233501	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300012971\|Ga0126369_13251402	Not Available	532	Open in IMG/M
3300014200\|Ga0181526_10198896	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300015371\|Ga0132258_10577655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L56	2820	Open in IMG/M
3300016270\|Ga0182036_10233545	Not Available	1367	Open in IMG/M
3300016270\|Ga0182036_10236256	All Organisms → cellular organisms → Bacteria → Proteobacteria	1360	Open in IMG/M
3300016294\|Ga0182041_10955383	Not Available	773	Open in IMG/M
3300016341\|Ga0182035_11112792	Not Available	703	Open in IMG/M
3300021407\|Ga0210383_10129233	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300021560\|Ga0126371_10881339	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300025427\|Ga0208077_1003335	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300025443\|Ga0208081_1079245	Not Available	514	Open in IMG/M
3300025457\|Ga0208850_1020965	Not Available	1163	Open in IMG/M
3300025464\|Ga0208076_1077469	Not Available	575	Open in IMG/M
3300025579\|Ga0207927_1001470	All Organisms → cellular organisms → Bacteria	10083	Open in IMG/M
3300025619\|Ga0207926_1040265	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300025878\|Ga0209584_10061981	Not Available	1341	Open in IMG/M
3300026294\|Ga0209839_10272823	Not Available	525	Open in IMG/M
3300026783\|Ga0207778_111116	Not Available	648	Open in IMG/M
3300026817\|Ga0207775_105750	Not Available	990	Open in IMG/M
3300026833\|Ga0207728_119601	Not Available	606	Open in IMG/M
3300026997\|Ga0207784_1015172	Not Available	816	Open in IMG/M
3300027000\|Ga0207803_1006278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1794	Open in IMG/M
3300027014\|Ga0207815_1029050	Not Available	673	Open in IMG/M
3300027042\|Ga0207766_1004320	Not Available	1760	Open in IMG/M
3300027680\|Ga0207826_1004844	All Organisms → cellular organisms → Bacteria	3672	Open in IMG/M
3300027698\|Ga0209446_1032998	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300027703\|Ga0207862_1167238	Not Available	657	Open in IMG/M
3300027783\|Ga0209448_10030849	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300027812\|Ga0209656_10037688	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300027812\|Ga0209656_10045243	All Organisms → cellular organisms → Bacteria	2522	Open in IMG/M
3300027812\|Ga0209656_10087799	Not Available	1657	Open in IMG/M
3300027812\|Ga0209656_10196979	Not Available	979	Open in IMG/M
3300027824\|Ga0209040_10053440	Not Available	2424	Open in IMG/M
3300027824\|Ga0209040_10208920	Not Available	1006	Open in IMG/M
3300027824\|Ga0209040_10359268	Not Available	689	Open in IMG/M
3300027889\|Ga0209380_10009533	All Organisms → cellular organisms → Bacteria	5688	Open in IMG/M
3300027898\|Ga0209067_10428498	Not Available	743	Open in IMG/M
3300027898\|Ga0209067_10901263	Not Available	519	Open in IMG/M
3300027902\|Ga0209048_10445203	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300027902\|Ga0209048_10956301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	550	Open in IMG/M
3300027911\|Ga0209698_10813706	Not Available	705	Open in IMG/M
3300027911\|Ga0209698_11214338	Not Available	555	Open in IMG/M
3300028015\|Ga0265353_1011168	Not Available	820	Open in IMG/M
3300028639\|Ga0302168_1026848	Not Available	925	Open in IMG/M
3300028645\|Ga0302158_1072670	Not Available	541	Open in IMG/M
3300028646\|Ga0302159_10075238	Not Available	750	Open in IMG/M
3300028649\|Ga0302162_10152969	Not Available	558	Open in IMG/M
3300028665\|Ga0302160_10077138	Not Available	708	Open in IMG/M
3300030047\|Ga0302286_10447064	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300031543\|Ga0318516_10725223	Not Available	564	Open in IMG/M
3300031573\|Ga0310915_10539522	Not Available	828	Open in IMG/M
3300031719\|Ga0306917_11209646	Not Available	586	Open in IMG/M
3300031722\|Ga0311351_10002502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17271	Open in IMG/M
3300031768\|Ga0318509_10818179	Not Available	515	Open in IMG/M
3300031860\|Ga0318495_10361585	Not Available	642	Open in IMG/M
3300031879\|Ga0306919_10637381	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300031890\|Ga0306925_10067352	All Organisms → cellular organisms → Bacteria	3763	Open in IMG/M
3300031902\|Ga0302322_103706756	Not Available	522	Open in IMG/M
3300031954\|Ga0306926_10398756	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300032160\|Ga0311301_10229783	Not Available	3106	Open in IMG/M
3300032261\|Ga0306920_101780455	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300032261\|Ga0306920_104304332	Not Available	512	Open in IMG/M
3300032770\|Ga0335085_10066959	Not Available	4770	Open in IMG/M
3300032770\|Ga0335085_11573644	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300032770\|Ga0335085_11827308	Not Available	622	Open in IMG/M
3300032782\|Ga0335082_10526769	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300032782\|Ga0335082_11331661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	587	Open in IMG/M
3300032783\|Ga0335079_10833191	Not Available	953	Open in IMG/M
3300032828\|Ga0335080_10567616	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300032829\|Ga0335070_10003287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18844	Open in IMG/M
3300032829\|Ga0335070_10107356	All Organisms → cellular organisms → Bacteria	2910	Open in IMG/M
3300032893\|Ga0335069_10162910	All Organisms → cellular organisms → Bacteria	2751	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.15%
Host-Associated	Host-Associated	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.64%
Aquatic	Environmental → Aquatic	30.51%
Plants	Host-Associated → Plants	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.86%
Freshwater	Environmental → Aquatic → Freshwater	19.49%
Sediment	Environmental → Aquatic → Sediment	11.02%
Peat	Environmental → Terrestrial → Peat	6.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.02%
Loam	Environmental → Terrestrial → Soil → Loam	10.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.78%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.69%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.95%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.54%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	16.10%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	14.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	11.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.47%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.63%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.24%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.54%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001417	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010230	Filterable freshwater microbial communities from Conwy River, North Wales, UK. Not filtered control. After WGA	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025443	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026783	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 36 (SPAdes)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026833	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028639	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_2	Environmental	Open in IMG/M
3300028645	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_1	Environmental	Open in IMG/M
3300028646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_2	Environmental	Open in IMG/M
3300028649	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2	Environmental	Open in IMG/M
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20196J14858_10032662	3300001417	Arctic Peat Soil	MSYVVHVTMTEEKEAVQKAVIAGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKT
JGI26341J46601_100567421	3300003219	Bog Forest Soil	MSYVVHVTMTEEDEAQPKPASGVKVHVEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWTEHPDRSD*
JGI26341J46601_100567601	3300003219	Bog Forest Soil	MSYVVHVTMTEEDEAQPKPTSGVKVHVEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWTEHPDRSD*
JGI24140J50213_100869323	3300003369	Arctic Peat Soil	MSYVVHVTMTEQEGAQQKPTIGGKVHVEGKYEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD*
JGI24140J50213_101716221	3300003369	Arctic Peat Soil	MAYVVHVTMTEEEEAKQKPAIGGKIHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD*
JGI24140J50213_102098161	3300003369	Arctic Peat Soil	MSYVVHVTMTEEKEAVQKAVIAGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD*
Ga0062385_107953791	3300004080	Bog Forest Soil	MSYVVHVTMTEEEAQNKEIVGTRIHIDGKYEYKNLELAREAAEVACHAAAKLKPSRTKTIDDDDWTGHPDRSD*
Ga0062387_1000090911	3300004091	Bog Forest Soil	MSYVVHVTMTEEDAVQPKRASGVKVHIEGNYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWIEHPDRSDSD*
Ga0062389_1004985061	3300004092	Bog Forest Soil	MSYVVHVTMTEEDAVQPKRASGVKVHIEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWIEHPDRSDSD*
Ga0062386_1001977651	3300004152	Bog Forest Soil	MSYVVHVTMTEEDEMEQKPATGGTVHVEGQFEYKNLEMAREAAEIACNAAAKLRPSRSKTIDDDDWTEHPDRSD*
Ga0062386_1003739972	3300004152	Bog Forest Soil	MSYVVHVTMTEEEAEHKAVSGSKTHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTMDDDDWTEHPDRSD*
Ga0062386_1003861361	3300004152	Bog Forest Soil	MSYVVHVTMTEEETQNKDIVGTRIHIDGKYEYKNLELAREAAEVACHAAAKLKPSRTKTIDDDDWTGHPDRSD*
Ga0062386_1004707072	3300004152	Bog Forest Soil	MSYVVHVTMTEEQEVPRKPVGPSKIHVDGKYIYKNLELAREAAEVACHAAEKLHPMLTKTMDDDDWTGHPDRSD*
Ga0062386_1006020141	3300004152	Bog Forest Soil	MSYVVHVTMTEEDEVQPKPTSGVKVHVEGKYEYKNLKIAREAAEVACTAAVKLRPSRTRTIDDDDWIEHPDRSDSD*
Ga0070762_105874531	3300005602	Soil	MSYVVHVTMTEEEEAEQKAVYAGKLHVEGQFEYNNLEIAREAAEIACTAAAKMKPSRSKTIDDDDWTEHPDRSD*
Ga0066903_1047785012	3300005764	Tropical Forest Soil	MSFVVHVTMTEEADKRPSSTKKRTIHVEGTYEYNNLEIAREAAEVACHAAAKLHPARAVAVDDDDWTGHPDRSD*
Ga0066788_101971201	3300005944	Soil	MSYVVHVTMIEEEEAPKMGIVGARIHIDGKYEYKNLEIAREAAEVACHAAAKLKPSRTKTIDDDDWTGHPDRSD*
Ga0066789_101327152	3300005994	Soil	MSYVVHVTMTEEKEAVKKAVIAGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD*
Ga0075029_1000330172	3300006052	Watersheds	MSYVVQVTMTEEEEAQPNPAASGKIHVEGQFEYNNLEIAREAAEIACHAAAKMKPSRSRTVDDDDWTEHPDRSD*
Ga0075029_1001096962	3300006052	Watersheds	MSYVVHVTMTEGEEIQRKPAVSTKVHVEGKYEYPNLEIAREAAEVACHAAEKLHPSRTKSMDDDDWTGHPDRSD*
Ga0075029_1002027102	3300006052	Watersheds	MSYVVHVTMTEEEEAEQKAVAAGKVHVEGQFEYNNLELAREAAEVACNAAQKMKPSRSKTIDDDDWTEHPDRSD*
Ga0075029_1002094462	3300006052	Watersheds	MSYVVHVTMTEEEEAQQKPALGVKVHVEGKYEYKNLEIAREAAEVACHAAEKLHPSRTKTIDDDDWTGHPDRSD*
Ga0075029_1002631992	3300006052	Watersheds	MSYVVHVTMTEELKNGQKPKIGTTIHVEGKYEYKTLENAREAAEVACHAAAKLNPSRSRAMDDDDWTSHPDRSD*
Ga0097691_10000426	3300006055	Arctic Peat Soil	MSYVVHVTMTEEEEAKRKPALGGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD*
Ga0097691_10428174	3300006055	Arctic Peat Soil	MSYVVHVTMTEEEEAKQKPAIGGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD*
Ga0097691_10538151	3300006055	Arctic Peat Soil	MSYVVHVTMTEEEKVEQKPAIGGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSRTIDDDDWTEHPDRSD*
Ga0075017_1004566002	3300006059	Watersheds	MSYVVHVTMTEEEEKQRRPKDGGKVHVDGKYEYKNLELAREAAEVACHAAARLNPSRTKTMDDDDWTGHPDRSD*
Ga0075030_1013649221	3300006162	Watersheds	MSYVVHVTMTEGEEIQRKPAVSTKVHVEGKYEYPNLEIAREAAEVACHAAEKLHPSRTKTIDDDDWTGHPDRSD*
Ga0075014_1007995951	3300006174	Watersheds	MSYVVHVTMTEEEEIHRKPAVSTKVHVEGKYEYQNLEVAREAAEVACHAAEKLHPSRTKSMDDDDWTGHPDRSD*
Ga0075014_1008788961	3300006174	Watersheds	MSYVVHVTMTEEEEAELKPTNNSKVHVEGQFEYKNLEVAREAAEIACSAAAKLRPSRTKTIDDDDWTEHPDRSD*
Ga0075521_100370992	3300006642	Arctic Peat Soil	MSYVVHVTMTEEEDGRTEEIVGARIHVDGKYEYKNLEIAREAAEIACHAAVKLKPSRTKTIDDDDWTGHPDRSD*
Ga0075521_100966161	3300006642	Arctic Peat Soil	MSYVVHVTMTEQEEAQQPAVGGKVHVEGKFEYNNLEIAREAAEIACNAASKMRPSRSKTIDDDDWTEHPDRSD*
Ga0075521_101577942	3300006642	Arctic Peat Soil	MSYVVHVTMTEQEGAQQKPTIGGKVHVEGKYEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPD
Ga0126373_101399282	3300010048	Tropical Forest Soil	MTYVVQVTMTEEEEVQSKAKGQGKVHIEGKYEYKNLEVAREAAEVACHAVAKLKPSRTKTADDDDWRGHPDRSD*
Ga0136236_10364681	3300010230	Freshwater	MTEEEEAAQKPARSGKVHVEGQYEYKNLEIAREAAEVACTAAARLKPSRMKTIDDDDWTEHPDRSD*
Ga0074046_100014945	3300010339	Bog Forest Soil	MTEEDEAQPKPTSGVKVHVEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWTEHPDRSD*
Ga0074046_101706323	3300010339	Bog Forest Soil	MSYVVHVTMTEEGEAVEKAVCTGKVHVEGQFEYNNLEIAREAAEIACNAAAKMKPARSKTIDDDDWTEHPDRSD*
Ga0074046_103220862	3300010339	Bog Forest Soil	MTEEEEIQNKPAVSTKVHVEGKYEYKNLEIAREAAEVACHAAAKLNPSRTKTMDDDDWTGHPDRSD*
Ga0074045_101359832	3300010341	Bog Forest Soil	MTEEEEAEQQPATGGKVHVEGKYEYKNLEIAREAAEVACNAAVKLRPSRTKTIDDDDWTEHPDRSDQ*
Ga0126378_113206572	3300010361	Tropical Forest Soil	MAEEEEFRNNIKDSRNVHVEGKYEYKNLELAREAAEVACHAAARLHPLRTKTIDDDDWTGHPDRSD*
Ga0126379_102384272	3300010366	Tropical Forest Soil	MTYVVHVTMTEEEEAQSKATTNAKVHIDGKYEYKNLELAREAAEVACHAAAKLKPSRTKTVDDDDWKGHPDRSD*
Ga0126381_1002170563	3300010376	Tropical Forest Soil	MTEEEEVQSKAKGQGKVHIEGKYEYKNLEVAREAAEVACHAVAKLKPSRTKTADDDDWRGHPDRSD*
Ga0126381_1004985712	3300010376	Tropical Forest Soil	MTEEEEARSQAKTRAKVHIDGKYEYKNLELAREAAEVACHAAAKLKPSRTKTVDDDDWTGHPDRSD*
Ga0126381_1005098862	3300010376	Tropical Forest Soil	MTYVVHVTMTEEEEAQSQAKGKGKIHIDGEYEYKNLEVAREAAEVACYAAAKLKPSRTKTVDDDDWRGHPDRSD*
Ga0136449_1001559071	3300010379	Peatlands Soil	MSYVVHVTMTEEDEVQPKRASGVKVHVEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWIEHPDRSDSD*
Ga0126383_102335012	3300010398	Tropical Forest Soil	MTYVVQVTMTEEEEAQFKATTNAKVHIDGKYEYKNLELAREAAEVACHAAAKLKPSRTKTVDDDDWKGHPDRSD*
Ga0126369_132514022	3300012971	Tropical Forest Soil	MAEEEEFRNNIKDSRNVHVEGKYEYKNLELAREAAEVACHAAARLHPLRTKTID
Ga0181526_101988962	3300014200	Bog	MSYVVHVTMTEENEVQPKKAKGVKVHVEGKYEYKNLELAREAAEVACTAAVKLRPSRTRTIDDDDWTEHPDRSD*
Ga0132258_105776552	3300015371	Arabidopsis Rhizosphere	MRRAFMAYVVHVTMTEEEKKGKTPVSRGKVHVEGQYEYKNLEIAREAAEVACTAAAKLRPSRMKTIDDDDWTGHPDRSD*
Ga0182036_102335451	3300016270	Soil	HVTMTEEGESQSSKEVRETVHVEGKYTYKNLELAREAAEVACHAAGKLHPSQTKTIDDDDWTGHPDRSD
Ga0182036_102362562	3300016270	Soil	MSYVVHVTMTEEEEAQSKAKTGLKVHVDGKYQYKNLELAREAAEVACHAAAKLKPSRTRTVDDDDWTEHPDRSD
Ga0182041_109553831	3300016294	Soil	SSYCLRRAFMSYVVHVTMTEEEEAQSKAKTGLKVHVDGKYQYKNLELAREAAEVACHAAAKLKPLRTRTVDDDDWTGHPDRSD
Ga0182035_111127922	3300016341	Soil	MSYVLHVTMTEEEEAQSKAKTQAKVHVDGKYEYKNLETAREAAEVACHAAAKLKPSRSKTVDDDDWTG
Ga0210383_101292332	3300021407	Soil	MSYVVHVTMIEENDVQPKRAKGVKVHVEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRSIDDDDWTEHPDRSD
Ga0126371_108813391	3300021560	Tropical Forest Soil	EEEFRNNIKDSRNVHVEGKYEYKNLELAREAAEVACHAAARLHPLRTKTIDDDDWTGHPDRSD
Ga0208077_10033353	3300025427	Arctic Peat Soil	MAYVVHVTMTEEEEAKQKPAIGGKIHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD
Ga0208081_10792451	3300025443	Arctic Peat Soil	MSYVVHVTMTEEEEAQQKPTVGGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD
Ga0208850_10209651	3300025457	Arctic Peat Soil	MSYVVHVTMTEEKEAVQKAVIAGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD
Ga0208076_10774691	3300025464	Arctic Peat Soil	MSYVVHVTMTEQEGAQQKPTIGGKVHVEGKYEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD
Ga0207927_10014706	3300025579	Arctic Peat Soil	MSYVVHVTMTEEEEAKRKPALGGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD
Ga0207926_10402652	3300025619	Arctic Peat Soil	MSYVVHVTMTEEEEAKQKPAIGGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD
Ga0209584_100619812	3300025878	Arctic Peat Soil	MSYVVHVTMTEEEDGRTEEIVGARIHVDGKYEYKNLEIAREAAEIACHAAVKLKPSRTKTIDDDDWTGHPDRSD
Ga0209839_102728232	3300026294	Soil	MSYVVHVTMIEEEEAPKMGIVGARIHIDGKYEYKNLEIAREAAEVACHAAAKLKPSRTKTIDDDDWTGHPDRSD
Ga0207778_1111161	3300026783	Tropical Forest Soil	MSYIVHVTMTEEEEVRRQPAVSTKVHVEGKYEYKNLEIAREAAEVACHAAAKLNPSRTKTMDDDDWTGHPDRSD
Ga0207775_1057502	3300026817	Tropical Forest Soil	TMTEEEEVRRQPAVSTKVHVEGKYEYKNLEIAREAAEVACHAAAKLHPSRTRTMDDDDWTGHPDRSDQ
Ga0207728_1196011	3300026833	Tropical Forest Soil	MSYIVHVTMTEEEEVRRQPAVSTKVHVEGKYEYKNLEIAREAAEVACHAAAKLNPSRTKTMDDDDWTGHPDRSDQ
Ga0207784_10151722	3300026997	Tropical Forest Soil	MSYVVHVTMTEKEEVGHKPAVSTKVHVEGKYEYKNLEIAREAAEVACHAAAKLHPSRTRTMDDDDWTGHPDRSDQ
Ga0207803_10062783	3300027000	Tropical Forest Soil	MSYVVHVTMTEKEEVGHKPAVSTKVHVEGKYEYKNLEIAREAAEVACHAAAKLNPSRTKTMDDDDWTGHPDRSDQ
Ga0207815_10290502	3300027014	Tropical Forest Soil	MSYIVHVTMTEEEEVEHKPAVSTKVHVEGKYQYKNLEIAREAAEVACHAAAKLHPSRTRTMDDDDWTGHPDRSDQ
Ga0207766_10043202	3300027042	Tropical Forest Soil	MSYIVHVTMTEEEEVEHKPAVSTKVHVEGKYQYKNLEIAREAAEVACHAAAKLHPSRTRTMDDDDWTGHPDRSD
Ga0207826_10048443	3300027680	Tropical Forest Soil	MSYIVHVTMTEEEEVRRQPAVSTKVHVEGKYEYKNLEIAREAAEVACHAAAKLNPSRTRTMDDDDWTGHPDRSDQ
Ga0209446_10329982	3300027698	Bog Forest Soil	MSYVVHVTMTEEEAQNKEIVGTRIHIDGKYEYKNLELAREAAEVACHAAAKLKPSRTKTIDDDDWTGHPDRSD
Ga0207862_11672381	3300027703	Tropical Forest Soil	MSYVVHVTMTEEEKVEHKPAVSTKVIHVEGKYEYKNLEIAREAAEVACHAAAKLNPSRTRTMDDDDWTGHPDRSDQ
Ga0209448_100308492	3300027783	Bog Forest Soil	MSYVVHVTMTEEDAVQPKRASGVKVHIEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWIEHPDRSDSD
Ga0209656_100376884	3300027812	Bog Forest Soil	MSYVVHVTMTEEDEAQPKPTSGVKVHVEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWTEHPDRSD
Ga0209656_100452433	3300027812	Bog Forest Soil	MSYVVHVTMTEEDEAQPKPASGVKVHVEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWTEHPDRSD
Ga0209656_100877991	3300027812	Bog Forest Soil	MSYVVHVTMTEEGEAVEKAVCTGKVHVEGQFEYNNLEIAREAAEIACNAAAKMKPARSKTIDDDDWTEHPDRSD
Ga0209656_101969791	3300027812	Bog Forest Soil	MSYVVHVTMTEEETQNKDIVGTRIHIDGKYEYKNLELAREAAEVACHAAAKLKPSRTKTIDDDDWTGHPDRSD
Ga0209040_100534402	3300027824	Bog Forest Soil	MSYVVHVTMTEEEEIQNKPAVSTKVHVEGKYEYKNLEIAREAAEVACHAAAKLNPSRTKTMDDDDWTGHPDRSD
Ga0209040_102089203	3300027824	Bog Forest Soil	MSYVVHVTMTEEEAEHKAVSGSKTHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTMDDDDWTEHPDRSD
Ga0209040_103592681	3300027824	Bog Forest Soil	MSYVVHVTMTEEDEVQPKPTSGVKVHVEGKYEYKNLKIAREAAEVACTAAVKLRPSRTRTIDDDDW
Ga0209380_100095337	3300027889	Soil	MSYVVHVTMTEEEEAEQKAVYAGKLHVEGQFEYNNLEIAREAAEIACTAAAKMKPSRSKTIDDDDWTEHPDRSD
Ga0209067_104284982	3300027898	Watersheds	TMSYVVHVTMTEGEEIQRKPAVSTKVHVEGKYEYPNLEIAREAAEVACHAAEKLHPSRTKSMDDDDWTGHPDRSD
Ga0209067_109012632	3300027898	Watersheds	MSYVVQVTMTEEEEAQPNPAASGKIHVEGQFEYNNLEIAREAAEIACHAAAKMKPSRSRTVDDDDWT
Ga0209048_104452031	3300027902	Freshwater Lake Sediment	MAYVVHVTMTEEEEAKQKPAIGGKVHVEGQFEYNNLEIAREAAEIACNAAAKMRPSRSKTIDDDDWTEHPDRSD
Ga0209048_109563011	3300027902	Freshwater Lake Sediment	MSYVVHVTMTEEDEVKQKPASGGKVHVEGQFEYNNLEIAREAAEIACNAAAKMKPSRSKTIDDDDWTEHPDRSD
Ga0209698_108137061	3300027911	Watersheds	MSYVVHVTMTEEEEQKKSPKARKKVHVEGTYQYHNLEIAREAAEVACHAAEKLHPSRAKAADDDDWTGHPDRTD
Ga0209698_112143381	3300027911	Watersheds	MSYVVHVTMTEGEEIQRKPAVSTKVHVEGKYEYPNLEIAREAAEVACHAAEKLHPSRTKTIDDDDWTGHPDRSD
Ga0265353_10111681	3300028015	Soil	MSYVVHVTMTEENDVQPKKAKGVKIHVEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWTEHPDRSD
Ga0302168_10268482	3300028639	Fen	MSYVVHVTMTEEEEAQNSDRVGTRIHIDGKYEYKNLEIAREAAEVACHAAAKLKPSRTRTIDDDDWTGHPDRSD
Ga0302158_10726701	3300028645	Fen	MSYVVHVTMTEEEEAQNSDRVGTRIHIDGKYEYKNLEIAREAAEVACHAAAKLKPSRTRTIDD
Ga0302159_100752381	3300028646	Fen	MSYVVHVTMTEEEEAEQKQGSAHKIHVEGQFEYKNLEIAREAAEVACNAAAKMKPTRTKTIDDDDWTEHPDRSD
Ga0302162_101529691	3300028649	Fen	MSYVVHVTMTEEEGVEQKQARSGKVHVEGQFEYKNLEIAREAAEVACNAAAKMKPTRTKTIDDDDWTEHPDRSD
Ga0302160_100771381	3300028665	Fen	HVTMTEEEEAEQKQGSAHKIHVEGQFEYKNLEIAREAAEVACNAAAKMKPTRTKTIDDDDWTEHPDRSD
Ga0302286_104470641	3300030047	Fen	MSYVVHVTMTEEEEKQRTPKTAGKVHIDGKYEYRNLEMAREAAEVACHAAAKLHPSRTKTMDDDDWTGHPDRSD
Ga0318516_107252231	3300031543	Soil	MSYVVHVTMTEEEEQSSKDVREMVHVEGKYAYQNLELAREAAEVACHAAEKLHPSQTKTTDDDDWTGHPDRSD
Ga0310915_105395222	3300031573	Soil	MSYVVRVVMTEEEESAQKPAIGVKVHVDGQYVYNNLEIAREAAQVACNAAAKMKPGRSRATSDEDWTEHPDRTD
Ga0306917_112096462	3300031719	Soil	MSYVVHVTMTEEEEAQSKAKTGLKVHVDGKYQYKNLELAREAAEVACHAAAKLKPLRTRTVDDDDWTGHPDRSD
Ga0311351_1000250214	3300031722	Fen	MSYVVHVTMTEEEEAQNSDRVGTRIHIDGKYEYKDLEIAREAAEVACHAAAKLKPSRTRTIDDDDWT
Ga0318509_108181792	3300031768	Soil	SYVVHVTMTEEEEQSSKDVREMVHVEGKYAYQNLELAREAAEVACHAAEKLHPSQTKTTDDDDWTGHPDRSD
Ga0318495_103615851	3300031860	Soil	MSYVVRVVMTEEEESAQKPAIGVKVHVDGQYVYNNLEIAREAAQVACNAAAKMKPGRSRATSDEDWTEHPD
Ga0306919_106373811	3300031879	Soil	MSYVLHVTMTEEEEAQSKAKTQAKVHVDGKYEYKNLETAREAAEVACHAAAKLKPSRSKTVDDDDWTGHPDRSD
Ga0306925_100673525	3300031890	Soil	MSYVVHVTMTEEGESQSSKEVRETVHVEGKYTYKNLELAREAAEVACHAAGKLHPSQTKTIDDDDWTGHPDRSD
Ga0302322_1037067562	3300031902	Fen	MSYVVHVTMTEEEEVEQKQARAGKVHVEGQFEYKNLEIAREAAEVACNAAAKMKPTRTKTIDDDDWTEHPDRSD
Ga0306926_103987561	3300031954	Soil	VTMTEEEEAQSKAKTGLKVHVDGKYQYKNLELAREAAEVACHTAAKLKPLRTRTVDDDDWTGHPDRSD
Ga0311301_102297832	3300032160	Peatlands Soil	MSYVVHVTMTEEDEVQPKRASGVKVHVEGKYEYKNLEIAREAAEVACTAAVKLRPSRTRTIDDDDWIEHPDRSDSD
Ga0306920_1017804552	3300032261	Soil	MSYVVHVTMTEGEEAKTKAKTRAKVHVDGKYEYKNLELAREAAEVACHAAAKMKPSRTKTVDDDDWTGHPDRSD
Ga0306920_1043043321	3300032261	Soil	MSYVVHVTMTEEGESQSSKEVRETVPVEGKYTYKNLELAREAAEVACHAAGKLHPSQTKTIDDDDWTGHPDRSD
Ga0335085_100669593	3300032770	Soil	MSYVVHVTMTEEEEVSKAKAEAKVHVDGKYEYNNLEIAREAAEVACHAAVKLKPSRTKTVDDDDWTEHPDRSD
Ga0335085_115736443	3300032770	Soil	MSYVVHVTMTEEEEAEQKAVSGKVHVEGQFEYNNLEIAREAAEIACNAAAKLKPARSKTIDDDDWTEHPDRSD
Ga0335085_118273081	3300032770	Soil	MSYVVRVTMTEEDEAQPKPVSGVKVHVDGKYEYKNLEIAREAAEVACTVAAKMKPSRMKTVDDDDWTGHPDRSDSA
Ga0335082_105267693	3300032782	Soil	RGFIAKEESIMSYVVHVTMTEEEEAKAATASGAKVHIDGKYEYKNLESAREAAEVACHAAVKLKPSRVKTVDDDDWTDHPDRSD
Ga0335082_113316612	3300032782	Soil	MSFVVHVIMTEEEEKKLQGRTKSKVHVEGTYEYNNLEMAREAAEVACHAAAKLHPEHAVEVDDDDWSGHPDRSDT
Ga0335079_108331911	3300032783	Soil	MSYVVHVTMTEEEEAPSKPKTEAKVHVDGKYEYKNLEVAREAAEVACHAAAKLKPSRTKTVDDDDWTGHPDRSD
Ga0335080_105676162	3300032828	Soil	MSYVVHVTMTEEEEAPSKPETEAKVHVDGKYEYKNLEVAREAAEVACHAAAKLKPSRTKTVDDDDWTGHPDRSD
Ga0335070_100032877	3300032829	Soil	MSYVVHVTMTEEEEKQPPSRKKGKVHVQGKYEYDNLEIAREAAEVACHAVAKLHPAHATSVDDDDWTGHPDRSDT
Ga0335070_101073564	3300032829	Soil	MSYVVHVTMTEEDQNTSKAGSKVHVEGKYEYKNLEIAREAAEVACHAAEKLHPSRTKTIDDDDWTGHPDRSD
Ga0335069_101629105	3300032893	Soil	MSYVVHVTMTEEEETHHHPSASGKVHVEGKYKYKNLEIAREAAEVACHAAEKLNPSHTKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076368

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences