Metagenome / Metatranscriptome Family F076333

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076333
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	96 residues
Representative Sequence	VASSGERIYIGTHLALITEHNESGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRGGVEFVTQSAESAQRCRELVSRAD
Number of Associated Samples	94
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.27 %
% of genes near scaffold ends (potentially truncated)	34.75 %
% of genes from short scaffolds (< 2000 bps)	77.97 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (59.322 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.339 % of family members)
Environment Ontology (ENVO)	Unclassified (27.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.153 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.05% β-sheet: 27.37% Coil/Unstructured: 51.58%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF13472	Lipase_GDSL_2	17.80
PF00400	WD40	4.24
PF00892	EamA	3.39
PF04952	AstE_AspA	3.39
PF13649	Methyltransf_25	3.39
PF00903	Glyoxalase	2.54
PF00440	TetR_N	2.54
PF12681	Glyoxalase_2	1.69
PF08241	Methyltransf_11	0.85
PF09365	DUF2461	0.85
PF13428	TPR_14	0.85
PF05988	DUF899	0.85
PF00067	p450	0.85
PF00528	BPD_transp_1	0.85
PF13377	Peripla_BP_3	0.85
PF13536	EmrE	0.85
PF13302	Acetyltransf_3	0.85
PF03572	Peptidase_S41	0.85
PF01569	PAP2	0.85
PF13523	Acetyltransf_8	0.85
PF01436	NHL	0.85
PF00496	SBP_bac_5	0.85
PF13088	BNR_2	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG2124	Cytochrome P450	Defense mechanisms [V]	0.85
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.32 %
Unclassified	root	N/A	40.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.32 %
Unclassified	root	N/A	40.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.32 %
Unclassified	root	N/A	40.68 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.93 %
Unclassified	root	N/A	40.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.93 %
Unclassified	root	N/A	40.68 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	44.92 %
Unclassified	root	N/A	40.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.68 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	3.39 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.54 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.54 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.68 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	3.39 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	2.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.54 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.69 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.85 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.68 %
Actinocrinis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis	3.39 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	2.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.54 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.69 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.85 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.68 %
Actinocrinis puniceicyclus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	3.39 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	2.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.54 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.69 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.85 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005172\|Ga0066683_10470542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	769	Open in IMG/M
3300005175\|Ga0066673_10206868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1122	Open in IMG/M
3300005180\|Ga0066685_10591017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300005187\|Ga0066675_10228559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1320	Open in IMG/M
3300005434\|Ga0070709_10055137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2509	Open in IMG/M
3300005435\|Ga0070714_100115189	Not Available	2386	Open in IMG/M
3300005435\|Ga0070714_100121844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2320	Open in IMG/M
3300005435\|Ga0070714_101251653	Not Available	724	Open in IMG/M
3300005436\|Ga0070713_100090500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2630	Open in IMG/M
3300005439\|Ga0070711_101778617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300005445\|Ga0070708_100011979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7066	Open in IMG/M
3300005445\|Ga0070708_100331146	Not Available	1435	Open in IMG/M
3300005450\|Ga0066682_10477412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300005467\|Ga0070706_100001281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26829	Open in IMG/M
3300005467\|Ga0070706_100001917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21451	Open in IMG/M
3300005467\|Ga0070706_101099506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300005471\|Ga0070698_100046090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4459	Open in IMG/M
3300005537\|Ga0070730_10001737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20611	Open in IMG/M
3300005537\|Ga0070730_10374583	Not Available	924	Open in IMG/M
3300005598\|Ga0066706_10747918	Not Available	775	Open in IMG/M
3300005602\|Ga0070762_10931460	Not Available	593	Open in IMG/M
3300005614\|Ga0068856_100976213	Not Available	866	Open in IMG/M
3300005921\|Ga0070766_10249876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1125	Open in IMG/M
3300005921\|Ga0070766_10851718	Not Available	623	Open in IMG/M
3300006028\|Ga0070717_10267866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1512	Open in IMG/M
3300006028\|Ga0070717_11891309	Not Available	539	Open in IMG/M
3300006046\|Ga0066652_101144477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300006175\|Ga0070712_100905103	Not Available	761	Open in IMG/M
3300006176\|Ga0070765_101389671	Not Available	662	Open in IMG/M
3300006806\|Ga0079220_11929984	Not Available	524	Open in IMG/M
3300006893\|Ga0073928_10037064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4571	Open in IMG/M
3300007788\|Ga0099795_10103371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1120	Open in IMG/M
3300009088\|Ga0099830_10213834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	1513	Open in IMG/M
3300009089\|Ga0099828_10166065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1958	Open in IMG/M
3300009545\|Ga0105237_10627352	Not Available	1082	Open in IMG/M
3300009551\|Ga0105238_12907135	Not Available	515	Open in IMG/M
3300010159\|Ga0099796_10325615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300010358\|Ga0126370_11745067	Not Available	600	Open in IMG/M
3300010359\|Ga0126376_12834829	Not Available	534	Open in IMG/M
3300010362\|Ga0126377_12406766	Not Available	603	Open in IMG/M
3300010366\|Ga0126379_13395674	Not Available	533	Open in IMG/M
3300010880\|Ga0126350_11370316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2351	Open in IMG/M
3300010937\|Ga0137776_1034325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1874	Open in IMG/M
3300011270\|Ga0137391_10065098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3125	Open in IMG/M
3300012096\|Ga0137389_11012079	Not Available	712	Open in IMG/M
3300012198\|Ga0137364_10061163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2545	Open in IMG/M
3300012199\|Ga0137383_10511946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	879	Open in IMG/M
3300012199\|Ga0137383_10634073	Not Available	781	Open in IMG/M
3300012201\|Ga0137365_10033825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3919	Open in IMG/M
3300012208\|Ga0137376_11289986	Not Available	620	Open in IMG/M
3300012209\|Ga0137379_10857175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300012210\|Ga0137378_10221881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1760	Open in IMG/M
3300012211\|Ga0137377_10127636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2428	Open in IMG/M
3300012285\|Ga0137370_10085436	Not Available	1757	Open in IMG/M
3300012350\|Ga0137372_10089177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2610	Open in IMG/M
3300012356\|Ga0137371_10707369	Not Available	770	Open in IMG/M
3300012357\|Ga0137384_10680037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	837	Open in IMG/M
3300012359\|Ga0137385_10177386	Not Available	1867	Open in IMG/M
3300012363\|Ga0137390_10219497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1888	Open in IMG/M
3300012363\|Ga0137390_10577621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1093	Open in IMG/M
3300012929\|Ga0137404_10518590	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300012955\|Ga0164298_11142649	Not Available	586	Open in IMG/M
3300012971\|Ga0126369_12669632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	584	Open in IMG/M
3300015372\|Ga0132256_103300221	Not Available	543	Open in IMG/M
3300018431\|Ga0066655_11412932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300018433\|Ga0066667_10287329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	1270	Open in IMG/M
3300018482\|Ga0066669_12313153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	513	Open in IMG/M
3300019887\|Ga0193729_1080320	Not Available	1273	Open in IMG/M
3300019887\|Ga0193729_1229883	Not Available	607	Open in IMG/M
3300020081\|Ga0206354_10660715	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300020199\|Ga0179592_10107917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1279	Open in IMG/M
3300020582\|Ga0210395_10240203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	1361	Open in IMG/M
3300020582\|Ga0210395_11272805	Not Available	539	Open in IMG/M
3300020583\|Ga0210401_10466060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	1126	Open in IMG/M
3300021171\|Ga0210405_10071448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2736	Open in IMG/M
3300021171\|Ga0210405_10463839	Not Available	995	Open in IMG/M
3300021180\|Ga0210396_10048989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3874	Open in IMG/M
3300021401\|Ga0210393_11241189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	599	Open in IMG/M
3300021402\|Ga0210385_10578979	Not Available	855	Open in IMG/M
3300021402\|Ga0210385_10610083	Not Available	832	Open in IMG/M
3300021420\|Ga0210394_10593837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	973	Open in IMG/M
3300021432\|Ga0210384_10713801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	897	Open in IMG/M
3300021474\|Ga0210390_11250326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300021479\|Ga0210410_10764316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300021559\|Ga0210409_10659503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	916	Open in IMG/M
3300025898\|Ga0207692_10223413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1117	Open in IMG/M
3300025898\|Ga0207692_10289922	Not Available	993	Open in IMG/M
3300025910\|Ga0207684_10001352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26867	Open in IMG/M
3300025910\|Ga0207684_10002251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19668	Open in IMG/M
3300025910\|Ga0207684_10007650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9692	Open in IMG/M
3300025911\|Ga0207654_11157040	Not Available	564	Open in IMG/M
3300025915\|Ga0207693_10274484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1321	Open in IMG/M
3300025915\|Ga0207693_10445018	Not Available	1013	Open in IMG/M
3300025915\|Ga0207693_10488852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	961	Open in IMG/M
3300025916\|Ga0207663_11712241	Not Available	506	Open in IMG/M
3300025922\|Ga0207646_10079508	Not Available	2932	Open in IMG/M
3300025929\|Ga0207664_11547375	Not Available	585	Open in IMG/M
3300026078\|Ga0207702_10119839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2353	Open in IMG/M
3300026088\|Ga0207641_10413392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1298	Open in IMG/M
3300027096\|Ga0208099_1023295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	875	Open in IMG/M
3300027096\|Ga0208099_1038851	Not Available	683	Open in IMG/M
3300027857\|Ga0209166_10000939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26833	Open in IMG/M
3300027857\|Ga0209166_10042802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2683	Open in IMG/M
3300027857\|Ga0209166_10517012	Not Available	612	Open in IMG/M
3300027857\|Ga0209166_10655807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300027862\|Ga0209701_10546502	Not Available	623	Open in IMG/M
3300027867\|Ga0209167_10493721	Not Available	670	Open in IMG/M
3300028906\|Ga0308309_11220387	Not Available	648	Open in IMG/M
3300029636\|Ga0222749_10832253	Not Available	505	Open in IMG/M
3300031090\|Ga0265760_10327649	Not Available	545	Open in IMG/M
3300031708\|Ga0310686_109207916	Not Available	1351	Open in IMG/M
3300031753\|Ga0307477_10807549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300031896\|Ga0318551_10517937	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300031962\|Ga0307479_11188130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300031962\|Ga0307479_11642046	Not Available	597	Open in IMG/M
3300032160\|Ga0311301_11203495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	971	Open in IMG/M
3300032180\|Ga0307471_103277760	Not Available	574	Open in IMG/M
3300032805\|Ga0335078_10017387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10681	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.07%
Host-Associated	Host-Associated	5.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.37%
Plants	Host-Associated → Plants	5.93%
Aquatic	Environmental → Aquatic	1.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.54%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.71%
Loam	Environmental → Terrestrial → Soil → Loam	28.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.54%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	22.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.54%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	18.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.69%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066683_104705421	3300005172	Soil	LITENNRSGPGSYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0066673_102068682	3300005175	Soil	VASSGERIHIGTHLALITENNRSGPGSYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0066685_105910172	3300005180	Soil	RIHIGTHLALITENNRSGPGSYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0066675_102285592	3300005187	Soil	VASSGERIHIGTHLALITENNRSGPESYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0070709_100551371	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	DGGIVMTSPGERISIAPHLTLITERNETGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA*
Ga0070714_1001151892	3300005435	Agricultural Soil	VASAGERIHIGTHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVRQGAESAQRCRELASQVLAPAAPVG*
Ga0070714_1001218443	3300005435	Agricultural Soil	MTSPGERISIAPHLTLITERNETGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA*
Ga0070714_1012516531	3300005435	Agricultural Soil	DLYKGGIVAGSGERIYIGTHLTLIAEHNDSGPGAYIRAIEFDGVTGMTGNEDRDWPALDPAFGLAEKLGCEGIWFKHRTGVEFVTRGEQTTQRCRELTRRLDPSGTH*
Ga0070713_1000905002	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VASSGERVYIGIHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARKLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPAG*
Ga0070711_1017786171	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PHLTLITERNDAGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFRHATGVEFLTQDAESARRSRELARDPAWEPA*
Ga0070708_1000119795	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MANSGDRIYIGTHLTLITEQSDSGPGAYIRGVEFNGVTGMTGNEDRDWPVLDPAFGLAERLGCEGIWFKHRSGVEFVKQGAESAQRCHELAHGSGS*
Ga0070708_1003311462	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VASAGERIYIGTHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVRQSAESAQRCRELASQVLAPAAPVG*
Ga0066682_104774122	3300005450	Soil	MRRNLGGCSVASSGERIHIGTHLALITENNRSGPGSYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0070706_10000128112	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSIERIYIGTHLTLITERNGSGPGAYVRGVEFDGVTGMTGNEDRDWPALDPAFGLAKRLGCEGIWLQHQSGVEFVTQSAESAQRRCRELANEQTVD*
Ga0070706_1000019177	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VASSGERIHIGTHLALIAEHNKSGPGAFILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFRHRGGVEFVTQSAESAQRCRELASRPD*
Ga0070706_1010995061	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ACNPLCLARRNGAAQPWGDVVASAGTRIHIGTHLALITENNKSGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCDGIWFKHRGGVEFVRQGAESAQRCRELAGQGLAPAAPVG*
Ga0070698_1000460903	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VASAGERIYIGTHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVRQGAESAQRCRELASQVLAPAAPVG*
Ga0070730_100017379	3300005537	Surface Soil	VASSGERIYIGTHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKYRGGVEFVTPTAESARRCRELASQRD*
Ga0070730_103745831	3300005537	Surface Soil	VTTSRERIYIGTHLTLITEQNDSGPGAYIRGVEFDGVTGMTGHEDRDWPALDPAFGLARRLGCEGIWFKHRSGVEFVTQGAESARRCQELATRQDGT*
Ga0066706_107479182	3300005598	Soil	MRRNLGGCSVASSGERIHIGTHLALITENNRSGPGSYILGVEFDGITGMAGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0070762_109314601	3300005602	Soil	VATAGERIYIGTHLALITENNQSGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRTGVEFVTQSAESAQ
Ga0068856_1009762132	3300005614	Corn Rhizosphere	VTSPGERISIAPHLTLITERNETGPGAWVRGVEFNGMTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA*
Ga0070766_102498761	3300005921	Soil	VASAGERIHIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHHGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0070766_108517182	3300005921	Soil	VATSGERIYIGTHLALITESNGSGLGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRAGVEFVTQSAESAQRCRKLAGGQV*
Ga0070717_102678662	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VASSGERIHIGTHLALITEHNKAGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFRHRGGVEFVTQSAESARRCRELASRRD*
Ga0070717_118913091	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPGERISIAPHLTLITERNDAGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFRHATGVEFLTQDAESARRSRELARDPAWEPPDGP
Ga0066652_1011444771	3300006046	Soil	VASSGERIHIGTHLALITENNRSGPGSYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQHCRELASQGLAPAAPVG*
Ga0070712_1009051031	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VASSGERVYIGIHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARKLGCEGIWFKHRGG
Ga0070765_1013896712	3300006176	Soil	VATSGERIYIGTHLALITESNGSGLGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRTGVEFVTQSAESAQRCRELVGGQD*
Ga0079220_119299841	3300006806	Agricultural Soil	MTSPGERISIAPHLTLITERNETGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFRHATGVEFLTQDAESARRCRELARDPAWEPA*
Ga0073928_100370643	3300006893	Iron-Sulfur Acid Spring	VASSGERIYIGTHLALIAEHNKSGAGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFKHPGGVEFVTQSAESAQRCRELASRGG*
Ga0099795_101033712	3300007788	Vadose Zone Soil	VASAGDRIHIGTHLALIAEHNKSGPGAYILGIEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0099830_102138342	3300009088	Vadose Zone Soil	VASSGERIYIGTHLALITEQNESGPGAYILGVEFDGVTGMTGKEDRDWPALDPAFGLAKRLGCEGIWFKHKSGVEFVRQTPESAQHCRELGSQRD*
Ga0099828_101660652	3300009089	Vadose Zone Soil	VASSGERIYIGTHLALITEQNESGPGAYILGVEFDGVTGMTGKEDRDWPALDPAFGLAKRLGCEGIWFKHKSGVEFVRQTPESAQHCRELASQRD*
Ga0105237_106273522	3300009545	Corn Rhizosphere	MTSPGERISIAPHLTLITERNETGPGAWVRGVEFNGLTGMTGTKDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA*
Ga0105238_129071351	3300009551	Corn Rhizosphere	MTSPGERISIAPHLTLITERNDAGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA*
Ga0099796_103256152	3300010159	Vadose Zone Soil	VASAGERIHIGTHLALIAEHNKSGPGAYILGIEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0126370_117450672	3300010358	Tropical Forest Soil	MANSGDRIYIGTHLTLITEQSDSGPGAYIRGVEFNGLTGMTGNEDRDWPALDPAFGLAERLGCEGIWFKHQSGVEFVKQGAESAQRCHELAHGSGS*
Ga0126376_128348291	3300010359	Tropical Forest Soil	MTSPGERISIAPHLTLITERNEAGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA*
Ga0126377_124067662	3300010362	Tropical Forest Soil	MTSPGERISIAPHLTLITERNEAGPGSYIRGIEFNGLTGMTGTEDRDWPALDPAFGLAERLGCDGIWFRHATGVEFLTQGAES
Ga0126379_133956741	3300010366	Tropical Forest Soil	VANSGDRIYIGTHLTLITEQSDSGPGAYIRGVEFNGLTGMTGNEDRDWPALDPAFGLAERLGCEGIWFKHQSGVEFVKQGAESAQRCHELAHGSGS*
Ga0126350_113703162	3300010880	Boreal Forest Soil	VASAGERIHIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRSGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0137776_10343252	3300010937	Sediment	MISRERIYIGTHLTLITEQNDSGPGAYIRGVEFDGVTGMTGHEDRDWPALDPAFGLAKRLGCEGIWFKHRSGVEFVTQGAESARRCRELATRQDGG*
Ga0137391_100650983	3300011270	Vadose Zone Soil	MKCGSKVGRIVASSSERIYIGTHLALITEQNESGSGAYILGVEFDGVTGMTGKEDRDWPALDPAFGLAKRLGCEGIWFKHKSGVEFVRQTPESAQHCRELASQRD*
Ga0137389_110120792	3300012096	Vadose Zone Soil	VASSGERIYIGTHLALITEQNESGPGAYILGVEFDGVTGMTGKEDRDWPALDPAFGLAKRLGCEGIWFKHKSGVEFVRQTPESAQHCRELA
Ga0137364_100611632	3300012198	Vadose Zone Soil	MRRNLGGCSVASSGERIHIGTHLALITENNRSGPGSYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESARRCRELASQGLAPAAPVG*
Ga0137383_105119462	3300012199	Vadose Zone Soil	LIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVQQGAESAQRCRELASQGLAPAAPVG*
Ga0137383_106340732	3300012199	Vadose Zone Soil	VASSGERIHIGTHLALITEHNESGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRGGVEFVTQSAE
Ga0137365_100338252	3300012201	Vadose Zone Soil	VASSGERIHIGTHLALITEHNESGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRGGVEFVTQSAESAQRCRELVSRAD*
Ga0137376_112899861	3300012208	Vadose Zone Soil	VASAGERIHIGTHLALIAEHNKSGPGAYILGIEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0137379_108571753	3300012209	Vadose Zone Soil	VASSGERIYIGTHLALITEHNESGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRGGVEF
Ga0137378_102218812	3300012210	Vadose Zone Soil	VASSGERIYIGTHLALITEHNESGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRGGVEFVTQSAESAQRCRELVSRAD*
Ga0137377_101276362	3300012211	Vadose Zone Soil	VASSGERIYIGTHLALITEHNESGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRGGVEFVTQGAESAQHCRELVSRPD*
Ga0137370_100854361	3300012285	Vadose Zone Soil	PITENNRSGPGSYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0137372_100891772	3300012350	Vadose Zone Soil	VASSGERIHIGTHLALITEHNESGPGSYILGVEFDGVTGMTGNEDRDWPVLAHAFGIAKRLGCEGIWFKHRGGVEFVTQSAESAQRCRELVSRAD*
Ga0137371_107073692	3300012356	Vadose Zone Soil	VASPGERIYIGTHLALITEHNESGPGSHILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRDGVEFVTQSAESAQRCRELVSRPD*
Ga0137384_106800371	3300012357	Vadose Zone Soil	LALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0137385_101773861	3300012359	Vadose Zone Soil	IGTHLALITEHNESGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRGGVEFVTQSAESAQRCRELVSRAD*
Ga0137390_102194972	3300012363	Vadose Zone Soil	VASSGERIYIGTHLALITEQNESGSGAYILGVEFDGVTGMTGKEDRDWPALDPAFGLAKRLGCEGIWFKHKSGVEFVRQTPESAQHCRELASQRD*
Ga0137390_105776211	3300012363	Vadose Zone Soil	LIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG*
Ga0137404_105185901	3300012929	Vadose Zone Soil	ERISIAPHLTLLTERNDAGPGAYVRGVEFNGLTGMTGSEDRDWPVLDPAFGLAERLGCDGIWFKHAAGVEFVTQGAESAQRCRELTLEVLARDPAWEPA*
Ga0164298_111426491	3300012955	Soil	MTSPGERISIAPHLTLITERNETGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELAR
Ga0126369_126696322	3300012971	Tropical Forest Soil	MANSGDRIYIGTHLTLITEQSDSGPGAYIRGVEFNGLTGMTGNEDRDWPALDPAFGLAERLGCEGIWFKHRRGVEFVKHGAESAQRCHELAHGPSA*
Ga0132256_1033002211	3300015372	Arabidopsis Rhizosphere	MTSSGERISIAPHLTLITERNETGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFRHATGVEFLTQGAESARRCRELARDPAWEPA*
Ga0066655_114129321	3300018431	Grasslands Soil	WHVITMRRNIGGCSVASSGERIHIGTHLALITENNRSGPGSYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG
Ga0066667_102873292	3300018433	Grasslands Soil	MRRNLGGCSVASSGERIHIGTHLALITENNRSGPGSYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG
Ga0066669_123131532	3300018482	Grasslands Soil	WPAITMRRNLGGCSVASSGERIHIGTHLALITENNRSGPGSYILGVEFDGITGMTGNEDRDWPVLDPAFGLARRLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG
Ga0193729_10803202	3300019887	Soil	MTSSGERIYIGTHLTLVTERNDSGPGAYIRGVEFDGVTGMTGNEDRDWPALDPAFGLAKRLGCEGIWFQHEGGVVFVTQSAESAQRCRELAKELNR
Ga0193729_12298831	3300019887	Soil	VASAGERIHIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVKQGAESAQRCRELASQGLAPAAPFG
Ga0206354_106607153	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	IAPHLTLITERNETGPGAWVRGVEFNGMTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA
Ga0179592_101079172	3300020199	Vadose Zone Soil	VASAGERIHIGTHLALIAEHNKSGPGAYILGIEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG
Ga0210395_102402032	3300020582	Soil	MSSGERIQIGTHLTLLTEQNTSGPGAYVRGVEFDAVTGMTGKEDRDWPVLDPAFGLAERLGCDGIWFKHKGGVEFVKQ
Ga0210395_112728051	3300020582	Soil	VASVGERIHIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHHGGVEFVKQGAESAQRCRELASQGLAPAAPVG
Ga0210401_104660602	3300020583	Soil	MSSGERIQIGTHLTLLTEQNTSGPGAYVRGVEFDAVTGMTGKEDRDWPVLDPAFGLAERLGCDGIWFKHKGGVEFVKQNAESAERCRELASQVDQ
Ga0210405_100714483	3300021171	Soil	VASSGERIYIGTHLALIAEHNKSGAGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFKHPGGVEFVTQSAESAQRCRDLASRGG
Ga0210405_104638392	3300021171	Soil	VASAGERIYIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFRHHGGVEFVKQGAESAQRC
Ga0210396_100489892	3300021180	Soil	VASSGERIYIGTHLALITEHNKSGAGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFKHPGGVEFVTQSAESAQRCRELASRGG
Ga0210393_112411891	3300021401	Soil	ERIQIGTHLTLLTEQNTSGPGAYVRGVEFDAVTGMTGKEDRDWPVLDPAFGLAERLGCDGIWFKHKGGVEFVKQNAESAERCRELASQVDQ
Ga0210385_105789792	3300021402	Soil	VASSGERIYIGTHLALIAEHNKSGAGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFKHPGGVEFVTQSAESAQR
Ga0210385_106100832	3300021402	Soil	MTLRRYLGGSGVASSGERIYIGTHLALITEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFRHPGGVEFVTQSAAGAQRCRELASRGG
Ga0210394_105938371	3300021420	Soil	VASSGERIYIGTHLALIAEHNKSGAGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFKHPGGVEFVTQSAESAQRCRELASRGG
Ga0210384_107138012	3300021432	Soil	VASVGERIHIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFRHHGGVEFVKQGAESAQRCRELASQGLAPAAPVG
Ga0210390_112503262	3300021474	Soil	IHIGTHLALITEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFKHPGGVEFVTQSAESAQRCRELASRG
Ga0210410_107643162	3300021479	Soil	VASAGERIHIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHHGGVEFVKQGAESAQRCRELASQGLAPAAPVG
Ga0210409_106595031	3300021559	Soil	GGCSVASAGERIHIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFRHHGGVEFVKQGAESAQRCRELASQGLAPAAPVG
Ga0207692_102234133	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPGERISIAPHLTLITERNETGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA
Ga0207692_102899222	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VASAGERIHIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVKQGAESALRCRELASQGLAPAAPVG
Ga0207684_1000135215	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSIERIYIGTHLTLITERNGSGPGAYVRGVEFDGVTGMTGNEDRDWPALDPAFGLAKRLGCEGIWLQHQSGVEFVTQSAESAQRRCRELANEQTVD
Ga0207684_100022517	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VASSGERIHIGTHLALIAEHNKSGPGAFILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFRHRGGVEFVTQSAESAQRCRELASRPD
Ga0207684_100076506	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MANSGDRIYIGTHLTLITEQSDSGPGAYIRGVEFNGVTGMTGNEDRDWPVLDPAFGLAERLGCEGIWFKHRSGVEFVKQGAESAQRCHELAHGSGS
Ga0207654_111570402	3300025911	Corn Rhizosphere	HLTLITERSESGPGAYIRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA
Ga0207693_102744841	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GGIVMTSPGERISIAPHLTLITERNETGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA
Ga0207693_104450182	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VASSGERVYIGIHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARKLGCEGIWFKHRGGVEFVKQGAESAQRCRELASQGLAPAAPAG
Ga0207693_104888522	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VASAGERIHIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVKQGAESAQRCRELASQGLAPAAPVG
Ga0207663_117122411	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VASAGERIHIGTHLALIAEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVRQGAESAQRCRELASQVLAPAAPVG
Ga0207646_100795082	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VASAGERIYIGTHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCEGIWFRHRGGVEFVRQSAESAQRCRELASQVLAPAAPVG
Ga0207664_115473751	3300025929	Agricultural Soil	VAGSGERIYIGTHLTLIAEHNDSGPGAYIRAIEFDGVTGMTGNEDRDWPALDPAFGLAEKLGCEGIWFKHRTGVEFVTRGEQTTQRCRELTRRLDPSGTH
Ga0207702_101198391	3300026078	Corn Rhizosphere	VTSPGERISIAPHLTLITERNETGPGAWVRGVEFNGMTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA
Ga0207641_104133922	3300026088	Switchgrass Rhizosphere	VTSPGERISIAPHLTLITERNETGPGAWVRGVEFNGLTGMTGTEDRDWPVLDPAFGLAERLGCDGIWFKHATGVEFLTQGAESARRCRELARDPAWEPA
Ga0208099_10232951	3300027096	Forest Soil	MSSGERIQIGTHLTLLTEQNTSGPGAYVRGVEFDAVTGMTGKEDRDWPVLDPAFGLAERLGCDGIWFKHKGGVE
Ga0208099_10388512	3300027096	Forest Soil	VASSGERIHIGTHLALITEHNKSGPGAYILGVEFDGLTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFKHPGGVEFVTQSAESAQRCRELASRGG
Ga0209166_100009394	3300027857	Surface Soil	VASSGERIYIGTHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKYRGGVEFVTPTAESARRCRELASQRD
Ga0209166_100428023	3300027857	Surface Soil	MRVCNPLWQARRNCYAALHWGSGVASPGERIYIGTHLALITEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRGGVEFVTQSAESAQRCRKLVSPPD
Ga0209166_105170121	3300027857	Surface Soil	VTTSRERIYIGTHLTLITEQNDSGPGAYIRGVEFDGVTGMTGHEDRDWPALDPAFGLARRLGCEGIWFKHRSGVEFVTQGAESARRCQELATRQDGT
Ga0209166_106558071	3300027857	Surface Soil	IGTHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRGGVEFVTPTAESARRCRELASQRD
Ga0209701_105465021	3300027862	Vadose Zone Soil	VASSGERIYIGTHLALITEQNESGPGAYILGVEFDGVTGMTGKEDRDWPALDPAFGLAKRLGCEGIWFKHKSGVEFVRQTPESAQHCRELGSQRD
Ga0209167_104937212	3300027867	Surface Soil	VASSGERIYIGTHLALITEHNKSGPGAYILGVEFDGVTGMTGNEDRDWPILDPAFGLAERLGCNGIWFKHAG
Ga0308309_112203872	3300028906	Soil	VATSGERIYIGTHLALITESNGSGLGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRAGV
Ga0222749_108322531	3300029636	Soil	VATSGERIYIGTHLALITENNQSGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRTGVEFVTQSAESAQRCR
Ga0265760_103276491	3300031090	Soil	VASSGERIYIGTHLALIAEHNKSGAGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFKHPGGVEFV
Ga0310686_1092079161	3300031708	Soil	VASSGERIHIGTHLALITEHNKSGPGAYILGVEFDGLTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFKHPGGVEFVTQSAESAQRCRDLASRGG
Ga0307477_108075491	3300031753	Hardwood Forest Soil	GERIYIGTHLALIAEHNQSGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRDGVEFVTQSAESAQRCRELVSRPD
Ga0318551_105179371	3300031896	Soil	VAGSCERIYIGTHLTLLTEQNGSGPGAYVRGVEFDGVTGMTGREDRDWPALDPAFGLARRLGCEGIWFKHKSGVEFVKHGAESALRCRELAD
Ga0307479_111881301	3300031962	Hardwood Forest Soil	VASSGERIYIGTHLALIAEHNQSGPGSYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAKRLGCEGIWFKHRDGVEFVTQSAESAQRCRELVSRPD
Ga0307479_116420462	3300031962	Hardwood Forest Soil	VTISRDRIYIGTHLTLITEPNDSGPGAYIRGIEFDGVTGMTGNEDRDWPALDPAFGLAKRLGCEGIWFKHRSGVEFVTQNAESARRCQELATQRDGG
Ga0311301_112034952	3300032160	Peatlands Soil	PWGSSVASSGERIYIGTHLALIAEHNKSGAGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLAERLGCAGIWFKHPGGVEFVTQSAESAQRCRELASRGG
Ga0307471_1032777601	3300032180	Hardwood Forest Soil	VASAGERIHIGTHLALITENNKSGPGAYILGVEFDGVTGMTGNEDRDWPVLDPAFGLARRLGCDGIWFRHRGGVEFVRQGAES
Ga0335078_100173873	3300032805	Soil	VASSDDRIYIGTHLTLITAQNDSGPGAYILGVEFDGVTGMTGNEDRDWPALDPAFGLAQRLGCQGIWFKHHSGVEFITESAESAQRCRELASQPEPGPACRGLTSNPAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076333

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences