NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F076330

Metagenome Family F076330

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F076330
Family Type Metagenome
Number of Sequences 118
Average Sequence Length 150 residues
Representative Sequence MLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCARVLVRDGETAIVLEADRLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVAHGRIALPIGLDGAEPALAACAAARVPVAATWIEYHGGHSG
Number of Associated Samples 101
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 13.56 %
% of genes near scaffold ends (potentially truncated) 45.76 %
% of genes from short scaffolds (< 2000 bps) 79.66 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(14.407 % of family members)
Environment Ontology (ENVO) Unclassified
(35.593 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.983 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.02%    β-sheet: 19.55%    Coil/Unstructured: 56.42%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF00924MS_channel 21.19
PF07755DUF1611 13.56
PF01406tRNA-synt_1e 5.08
PF05139Erythro_esteras 2.54
PF01594AI-2E_transport 1.69
PF09925DUF2157 1.69
PF00009GTP_EFTU 0.85
PF12516DUF3719 0.85
PF09190DALR_2 0.85
PF04012PspA_IM30 0.85
PF03144GTP_EFTU_D2 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 21.19
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 21.19
COG3367Uncharacterized conserved protein, NAD-dependent epimerase/dehydratase familyGeneral function prediction only [R] 13.56
COG0215Cysteinyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 5.93
COG0018Arginyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 5.08
COG0143Methionyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 5.08
COG2312Erythromycin esterase homologSecondary metabolites biosynthesis, transport and catabolism [Q] 2.54
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 1.69
COG1842Phage shock protein ATranscription [K] 1.69


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352024|deeps__Contig_152174All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1782Open in IMG/M
3300000956|JGI10216J12902_111943092All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium566Open in IMG/M
3300000956|JGI10216J12902_119659962All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium618Open in IMG/M
3300003267|soilL1_10089995All Organisms → cellular organisms → Bacteria1382Open in IMG/M
3300003319|soilL2_10199639All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300003321|soilH1_10099131All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium5167Open in IMG/M
3300003321|soilH1_10211495All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1185Open in IMG/M
3300003322|rootL2_10166940All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300003324|soilH2_10039092All Organisms → cellular organisms → Bacteria4063Open in IMG/M
3300003990|Ga0055455_10000868All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae4427Open in IMG/M
3300004479|Ga0062595_100754487All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium792Open in IMG/M
3300004479|Ga0062595_101041090All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium708Open in IMG/M
3300004781|Ga0062379_10012865All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1327Open in IMG/M
3300004782|Ga0062382_10267340All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium771Open in IMG/M
3300005093|Ga0062594_102086298All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium609Open in IMG/M
3300005181|Ga0066678_10460749All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium845Open in IMG/M
3300005332|Ga0066388_100255736All Organisms → cellular organisms → Bacteria2392Open in IMG/M
3300005336|Ga0070680_101969734All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium506Open in IMG/M
3300005436|Ga0070713_100799348All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300005437|Ga0070710_11525276All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium503Open in IMG/M
3300005439|Ga0070711_100839377All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium781Open in IMG/M
3300005440|Ga0070705_100792220All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium753Open in IMG/M
3300005444|Ga0070694_100739090All Organisms → cellular organisms → Bacteria → Proteobacteria803Open in IMG/M
3300005445|Ga0070708_100387644All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300005467|Ga0070706_102078178All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium514Open in IMG/M
3300005468|Ga0070707_100041798All Organisms → cellular organisms → Bacteria4388Open in IMG/M
3300005468|Ga0070707_101087122All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium766Open in IMG/M
3300005536|Ga0070697_101282047All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium653Open in IMG/M
3300005546|Ga0070696_100402333All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1071Open in IMG/M
3300005546|Ga0070696_100592639All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium893Open in IMG/M
3300005546|Ga0070696_101033259All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium688Open in IMG/M
3300005547|Ga0070693_100194297All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1314Open in IMG/M
3300005564|Ga0070664_100087054All Organisms → cellular organisms → Bacteria2700Open in IMG/M
3300005578|Ga0068854_100456734All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1068Open in IMG/M
3300005618|Ga0068864_100096756All Organisms → cellular organisms → Bacteria2613Open in IMG/M
3300005618|Ga0068864_100272148All Organisms → cellular organisms → Bacteria1578Open in IMG/M
3300005833|Ga0074472_10414462All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium755Open in IMG/M
3300005841|Ga0068863_101624994All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium655Open in IMG/M
3300005884|Ga0075291_1052185All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium552Open in IMG/M
3300005885|Ga0075284_1011895All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium996Open in IMG/M
3300005896|Ga0075282_1020227All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium854Open in IMG/M
3300006175|Ga0070712_101276288All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium640Open in IMG/M
3300006755|Ga0079222_10006231All Organisms → cellular organisms → Bacteria4027Open in IMG/M
3300006755|Ga0079222_10498748All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium891Open in IMG/M
3300006755|Ga0079222_12227450All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia polyisoprenivorans545Open in IMG/M
3300006804|Ga0079221_10686542All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium710Open in IMG/M
3300006806|Ga0079220_10347264All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium941Open in IMG/M
3300006844|Ga0075428_100549002All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300006845|Ga0075421_100683225All Organisms → cellular organisms → Bacteria1195Open in IMG/M
3300006846|Ga0075430_100922581All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium719Open in IMG/M
3300006852|Ga0075433_10106464All Organisms → cellular organisms → Bacteria2486Open in IMG/M
3300006852|Ga0075433_10538059All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300006854|Ga0075425_100373179All Organisms → cellular organisms → Bacteria1643Open in IMG/M
3300006854|Ga0075425_100658144All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1204Open in IMG/M
3300006854|Ga0075425_100763738All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1109Open in IMG/M
3300006903|Ga0075426_10395994All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1019Open in IMG/M
3300006904|Ga0075424_100257458All Organisms → cellular organisms → Bacteria1856Open in IMG/M
3300006904|Ga0075424_101392639All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium745Open in IMG/M
3300009162|Ga0075423_12030405All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium623Open in IMG/M
3300009176|Ga0105242_11459850All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium713Open in IMG/M
3300010038|Ga0126315_10912769All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium584Open in IMG/M
3300010040|Ga0126308_10625241All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium736Open in IMG/M
3300010045|Ga0126311_10273105All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1263Open in IMG/M
3300010401|Ga0134121_11839274All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium633Open in IMG/M
3300012929|Ga0137404_11657164All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium594Open in IMG/M
3300012960|Ga0164301_10548365All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium844Open in IMG/M
3300012960|Ga0164301_10944133All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium673Open in IMG/M
3300012961|Ga0164302_11383472All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium573Open in IMG/M
3300012985|Ga0164308_11799447All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium571Open in IMG/M
3300012986|Ga0164304_10169338All Organisms → cellular organisms → Bacteria1396Open in IMG/M
3300015371|Ga0132258_11217322All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1903Open in IMG/M
3300018054|Ga0184621_10228823All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium665Open in IMG/M
3300018059|Ga0184615_10085401All Organisms → cellular organisms → Bacteria1770Open in IMG/M
3300018061|Ga0184619_10469859All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium559Open in IMG/M
3300019789|Ga0137408_1329095All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1253Open in IMG/M
3300025326|Ga0209342_10113940All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2480Open in IMG/M
3300025327|Ga0209751_10299883All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1354Open in IMG/M
3300025552|Ga0210142_1002027All Organisms → cellular organisms → Bacteria3907Open in IMG/M
3300025556|Ga0210120_1007621All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2210Open in IMG/M
3300025910|Ga0207684_10150726All Organisms → cellular organisms → Bacteria2001Open in IMG/M
3300025912|Ga0207707_10381237All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300025922|Ga0207646_10284910All Organisms → cellular organisms → Bacteria1493Open in IMG/M
3300026088|Ga0207641_10038940All Organisms → cellular organisms → Bacteria3975Open in IMG/M
3300026088|Ga0207641_12342117All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium533Open in IMG/M
3300026095|Ga0207676_10046342All Organisms → cellular organisms → Bacteria3364Open in IMG/M
3300026095|Ga0207676_10083010All Organisms → cellular organisms → Bacteria2608Open in IMG/M
3300026116|Ga0207674_10384642All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1357Open in IMG/M
3300027716|Ga0209682_10023669All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1475Open in IMG/M
3300027787|Ga0209074_10003191All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium3560Open in IMG/M
3300027840|Ga0209683_10045234All Organisms → cellular organisms → Bacteria1917Open in IMG/M
3300027909|Ga0209382_10942959All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium905Open in IMG/M
3300028711|Ga0307293_10303408All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium507Open in IMG/M
3300028771|Ga0307320_10079986All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1228Open in IMG/M
3300028799|Ga0307284_10265778All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium685Open in IMG/M
3300028803|Ga0307281_10117488All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium908Open in IMG/M
3300028807|Ga0307305_10335486All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium686Open in IMG/M
3300028812|Ga0247825_10868655All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium653Open in IMG/M
3300028824|Ga0307310_10250224All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium851Open in IMG/M
3300028881|Ga0307277_10094597All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1263Open in IMG/M
3300028884|Ga0307308_10538257All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium560Open in IMG/M
(restricted) 3300031197|Ga0255310_10194272All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium567Open in IMG/M
(restricted) 3300031248|Ga0255312_1060661All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium908Open in IMG/M
3300031548|Ga0307408_100122599All Organisms → cellular organisms → Bacteria2016Open in IMG/M
3300031716|Ga0310813_10521226All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1041Open in IMG/M
3300031720|Ga0307469_11859272All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium583Open in IMG/M
3300031731|Ga0307405_10542729All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium939Open in IMG/M
3300031824|Ga0307413_10016656All Organisms → cellular organisms → Bacteria3805Open in IMG/M
3300031824|Ga0307413_10045986All Organisms → cellular organisms → Bacteria2592Open in IMG/M
3300031852|Ga0307410_10364689All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1158Open in IMG/M
3300031901|Ga0307406_10024808All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3585Open in IMG/M
3300031911|Ga0307412_10270841All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1329Open in IMG/M
3300031938|Ga0308175_100022578All Organisms → cellular organisms → Bacteria5058Open in IMG/M
3300031965|Ga0326597_10037243All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6155Open in IMG/M
3300032002|Ga0307416_100017924All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis4973Open in IMG/M
3300032004|Ga0307414_10166492All Organisms → cellular organisms → Bacteria1757Open in IMG/M
3300032005|Ga0307411_12092532All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium529Open in IMG/M
3300032180|Ga0307471_103264732All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium575Open in IMG/M
3300033480|Ga0316620_10624835All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1015Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere14.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.02%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere8.47%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil5.08%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil4.24%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment3.39%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.54%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.54%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.54%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.69%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.69%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.69%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.69%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.69%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.69%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.85%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.85%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003322Sugarcane root Sample L2Host-AssociatedOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004781Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2FreshEnvironmentalOpen in IMG/M
3300004782Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2FreshEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005884Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302EnvironmentalOpen in IMG/M
3300005885Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401EnvironmentalOpen in IMG/M
3300005896Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025326Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025552Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025556Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027716Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
deeps_027945702199352024SoilMXXXXXXXXXXXXXXXXXXGLAHPGEPLGAWVRMGRWPLHLRAGGCALLASAELAYLLRRCARVLVRDGTRPRILAAERLIALRTLQIVVGAPYLPDVNELKVLYPRLHVAEGRIALPLGLDGAEPALAACSAARLAVAGTWIEYRDAGSG
JGI10216J12902_11194309213300000956SoilSSGMLPGAPSRLPPSFPLRRALAFAHPGEPLGAWVRIGRWPLHLRACGCSLVTSTDMGFLLRRVARVLVRDGDRPVVLGAERLISWRTLQIVVGAPYLPELPALRELYPGLRISRGQITLPLGLGGGESAMALCAQAGLPVTVSRIEYESTADSG*
JGI10216J12902_11965996213300000956SoilMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRCPLHLRAGGRALLASTDLGYLLRRCARVLVRDGEAAIVLEAGQLIAWRTLQIVVGAPYLPELHALRAMYPGLRVAQGRIALPIGLDGAEPALAACAAARVPVTATWIAYDGGRSG*
soilL1_1008999523300003267Sugarcane Root And Bulk SoilMLPGALSRLPPSFPLRRALAFAHPGELLGAWVRVCRWPLHLRVGGCALLAASDLGYLLRRCGRVLVRSGERAVRLPAEQLIAWRTLQIAVGAPYLPELRELRELYPGIRITRGRIALPIGLGDGASALACCARAGLSVAGSWIEYGAERSG*
soilL2_1019963923300003319Sugarcane Root And Bulk SoilMLPGAPSRLDVSFPLRRALACAHPGDLLGAWVRVGRRPLRLRARGCALLAATDLGWLLRRAARVLVRHGGRAVVADAERLIAWRTLQVVVGAPYLPQVHELRKLYPELRADGWRLALPLGLEGAEPALAACVAARLPVAASWIDYAGGGSG*
soilH1_1009913183300003321Sugarcane Root And Bulk SoilMLPGAPSRLDVSFPLRRALACAHPGDLLGAWVRVGRRPLRLRARGCALLAATDLGWLLRRAARVLVRHGGRAVVLDAERLIAWRTLQVVVGAPYLPQVHELRKLYPELRADGWRLALPLGLEGAEPALAACVAARLPVAASWIDYAGVGSG*
soilH1_1021149523300003321Sugarcane Root And Bulk SoilMLPGAVSRLPSALPLRRALAHAHPGDPLGAWVRVSRWPLHLRAGGRALLAGHDLGYLIRRCARVLVSRGGRAAALTAEQLIAWRTLQIAIASPYVPAVEQLRALHPRLRVTPGRIALPLGLDGAEEALAFCAAARIPVSATWIEYQDGYQDAGSG*
rootL2_1016694023300003322Sugarcane Root And Bulk SoilMLPGALSRLPPSFPLRRALAFAHPGELLGAWVRVCRWPLHLRVGGCALLAASDLGYLLRRCGRVLVRSGERAVRLPAEQLIAWRTLQIAVGALYLPELRELRELYPGIRITRGRIALPIGLGDGASALACCARAGLSVAGSWIEYGAERSG*
soilH2_1003909213300003324Sugarcane Root And Bulk SoilMLPGAPSRLDVSFPLRRALACAHPGDLLGAWVRVGRRPLRLRARGCALLAATDLGWLLRRAARVLVRHGGRAVVLDAELLIAWRTLQVVVGAPYLPQVHELRKLYPELRADGWRLALPLGLEGAEPALAACVAARLPVAASWIDYAGGGSG*
Ga0055455_1000086833300003990Natural And Restored WetlandsMLPGAPSRLPTSFPLRRALGLTHPGDPLGAWVRMGRWPLHLRAGGCALLASADLGYLLRRCARVVVRDGAAAVVLEADRLIAWRTLQIVIGAPYLPEVHALRAMYPGLRVAHGRIALPIGLDGAEPALAACAAARVPVAATWIDYAGGSSG*
Ga0062595_10075448723300004479SoilMLPGAPSRLLPSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASTDLGYLLRRCTRVLVRDGEAAIVLEADQLIAWRTLQIVVGAPYLPEMQALRALYPGLRVAAGRIALPIGLDGAEPALAVCAATRLPVTATWIEYEAGRSG*
Ga0062595_10104109013300004479SoilPSSAMLPGAPSRLPPSFPLRRARAFAHPGELLGAWVRMGRWPLHLRARGRALLASDDLGFLLRRCARVIVRNGARAIALDAERLIAWRTLQIVVGAPYLPQLSELRALFPGLRVAEGRIALPLGLGGAEPALAACAAARVPVAATWIEYRAAHSG*
Ga0062379_1001286523300004781Wetland SedimentMLPGAPSRLPSSFPLRRALGLTHPGELLGAWVRTGRWPLHLRAGGRALLASADLGYLLRRCRRVLVRDGAQPAILDAERLIAWRTLQIVVGAPYLPEVPQLRAMFPGLRVAEGRITLPLGLDGAEAALAACAAARLPVAATWIEYRDAGSG*
Ga0062382_1026734013300004782Wetland SedimentMLPGAPSRLPSSFPLRRALGLTHPGELLGAWVRTGRWPLHLRAGGRALLASADLGYLLRRCRRVLVRDGAQPAILDAERLIAWRTLQIVVGAPYLPDVPQLRAMFPGLRVAEGRITLPLGLDGAEAALAACAAARLPVAATWIEYRDAGSG*
Ga0062594_10208629813300005093SoilMLPGAPSRLLPSFPLRRALGLAHPGDPLGAWVRMGRCPLHLRAGGRALLASTDLGYLLRRCVRVLVRDGEAAIVLEADQLIAWRTLQIVLAAPYLPEVHALRAMYPGLRVAQGRIALPIGLDGAEPALAVCAAARLPVTATWIEYDGGRSG*
Ga0066678_1046074913300005181SoilMLPGAPSRLPSSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCGRVLVRNGPRPTVLDAERLIAWRTLQIVVGAPFLPRVRELRALYPGLQVSGGRISLPLGLGGAEPALAACAAARLPVTATWIEYRDAGSG*
Ga0066388_10025573623300005332Tropical Forest SoilMLPGAPSRLPSSLQLRHALAFAHPGEPLGAWVRMGRWPLHLRACGRALLLSADLGYLLRRCRRVVVRDGERATALEAERLIAWRTLQIVVGAPYLPCLQSLRALYPRLRVAEGRIALPIGLDAAEPVLAACAAARVPVAGTWIEYRDAGSG*
Ga0070680_10196973413300005336Corn RhizosphereMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASTDLGYLLRRCTRVLVRDGEAAIVLEADQLIAWRTLQIVVGAPYLPEMQALRALYPGLRVAAGRIALPIGLDGAEPALAVCAATRLPVTATWIEYEAGRSG*
Ga0070713_10079934813300005436Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLPPSFPLRRALAFAHPGEPLGAWVRMGRWPLHLRAGGCSLVASTDMGFLLRRVAHVLVRDGQRPVALDAERLIAWRTLQIVVGTPYLPELAELRELYPALRVSHGRITLPRGLGGGEKALALCAHAGLPVTSSRIEYESTAGSG*
Ga0070710_1152527613300005437Corn, Switchgrass And Miscanthus RhizosphereVAPSSGMLPGAPSRLPPSFPLRRALAFAHPGEPLGAWVRMGRWPLHLRAGGCSLVASTDMGFLLRRVAHVLVRDGQRPVALDAERLIAWRTLQIVVGTPYLPELAELRELYPALRVSHGRITLPLGLG
Ga0070711_10083937713300005439Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLPPSFPLRRALAFAHPGEPLGAWVRMGRWPLHLRAGGCSLVASTDMGFLLRRVAHVLVRDGQRPVALDAERLIAWRTLQIVVGAPYLPELAELRELYPALRVSHGRITLPLGLGGGEKALALCAQAGLPVTSSRIEYESTAGSG*
Ga0070705_10079222013300005440Corn, Switchgrass And Miscanthus RhizosphereSSAMLPGAPSRLPSSFPLRRALALAHPGEPLGAWVRMGRWPLHLRAGGRALLASDDLGFLLRRCARVVVRNGAGAIALEAERLIGWRTLQIVVGAPYLPQLSELRALFPDLRVAEGKIALPLGLDGAEPALAACAAARVPVAGTWIEYRAAHSG*
Ga0070694_10073909023300005444Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLHASFPLRRALGLAHPGEPLGAWVRMGRWPLHLRAGGCALLASADLGYLLRRCSRVLVRDNGRPRILDADRLIAWRTLQIVVGAPYLPEVEELRRLYPGLRIVEGRIALPLGLDGAEPALA
Ga0070708_10038764423300005445Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLPSSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCGRVLVRNGPRPTVLDAERLIAWRTLQIVVGAPFLPRVRELRALYPGLQVSGGRISLPLGLGGAEPALAACAAARLPVTASWIEYRDAGSG*
Ga0070706_10207817813300005467Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLPSSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCARVLVRDGETAIVLEADRLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVAQGRIALPIGLDGAEPALAACAAA
Ga0070707_10004179823300005468Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCARVLVRDGETAIVLEADRLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVAHGRIALPIGLDGAEPALAACAAARVPVAATWIEYHGGHSG*
Ga0070707_10108712213300005468Corn, Switchgrass And Miscanthus RhizosphereSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCGRVLVRNGPRPTVLDAERLIAWRTLQIVVGAPFLPRVRELRALYPGLQVSGGRISLPLGLGGAEAALAACAAARLPVTATWIEYRDAGSG*
Ga0070697_10128204723300005536Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCARVLVRDGETAIVLEADRLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVAHGRIALPIGLDGAEPAL
Ga0070696_10040233323300005546Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLPSSFPLRRALAFAHPGELLGAWVRMGRWPLHLRAGGCALLAGTDLGFLLRRAGRVLIRIGERPVALPAEQLIAWRTLQIAVGAPYLPAVAELRELYPGLRVAHGRIALPLGLGDGAAALAFCARAGLPVAGSWVEYEGQTS
Ga0070696_10059263913300005546Corn, Switchgrass And Miscanthus RhizosphereSFPLRRALDLAHPGELLGAWVRMGRCHLHLRAGGRALLLSADLGHLLRRCGRIAVRHGGRPAVLEAERLIAWRTLQIVVGAPYLPDARELRAIYPGLRVAHGGLALPLGLDGAEPVLAACAAARLPVAATWIEYRDAGSG*
Ga0070696_10103325913300005546Corn, Switchgrass And Miscanthus RhizospherePSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCGRVFVRNGPRPTVLDAERLIAWRTLQIVVGAPFLPRVRELRALYPGLQVSCGRISLPLGLGGAEPALAACAAARLPVTASWIEYRDAGSG*
Ga0070693_10019429723300005547Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLPTSFPLRRALDLAHPGELLGAWVRMGRCHLHLRAGGRALLLSADLGHLLRRCGRIAVRHGGRPAVLEAERLIAWRTLQIVVGAPYLPDAHELRAIYPGLRVAHGGLALPLGLDGAEPVLAACAAARLPVAATWIEYRDAGSG*
Ga0070664_10008705433300005564Corn RhizosphereMLPGAPSRLPSSFPLRRALAYAHPGEPLGAWVRMGRWPLHLRAGGCALLASADLGFLLRRTAQVLVRSGERPAVLPAERLIAWRTLQIVVGTPYLPELRELQALYPGLRVGQGCIALPLGLGGGEAALALCAQAGMPVSAPWIEYEAAGSG*
Ga0068854_10045673423300005578Corn RhizosphereMLPGAPSRLHSSFPLRRALGLVHPGDLLGAWVRVGRWPLSLRAGGRALLACPDLGYLLRRCGRVLVRHGHRAVVLKADRLIAWRTLQIVVGAPFLPRVQELRAIYPGLRVCGSRIALPLGLDGAEPALAACAAARLPVRATWIDYGGGGSG*
Ga0068864_10009675633300005618Switchgrass RhizosphereMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRCPLHLRAGGRALLASTDLGYLLRRCVRVLVRDGEAAIVLEADQLIAWRTLQIVLAAPYLPEVHALRAMYPGLRVAQGRIALPIGLDGAEPALAVCAAARLPVTATWIEYDGGRSG*
Ga0068864_10027214833300005618Switchgrass RhizosphereMLPGAPSRLPSSFPLRRALAYAHPGEPLGAWVRMGRWPLHLRAGGCALLASADLGFLLRRTAQVLVRSGERPAVLPAERLIAWRTLQIVVGTPYLPELRELQALYPGLRAGHGRIALPLGLGGGEAALAVCTQAGIAVSASWIEYEGAGSG*
Ga0074472_1041446213300005833Sediment (Intertidal)SPRPTAKRWRSRRRLTRTWRMLPGAPSRLPASFPLRRALGLTHPGELLGAWVRTGRWPLHLRAGGRALLASADLGYLLRRCRRVLVRDGARPAILDAERLIAWRTLQIVVGAPYLPDVPQLRAMFPGLRVAEGRITLPLGLDGAEAALAACAAARLPVAATWIEYRDAGSG*
Ga0068863_10162499413300005841Switchgrass RhizosphereMLPGAPSRLPVSFPLRRALAYAHPGDPLGAWVRMGRWPLHLRAGGCALLASADLGFLLRRTAQVLVRSGQRPAVLPAERLIAWRTLQIVVGTPYLPELRELQALYPGLRVGQGCIALPLGLGGGEAALAL
Ga0075291_105218513300005884Rice Paddy SoilCRRLGRLSPPCGMFPGAPSRLHSSFPLRRALGLVHPGDLLGAWVRVGKWPLSLRAGGRALLASPDLGYLLRRCGRVLVRHGHRAVVLNADRLIAWRTLQIVVGAPFLPRVQELRAIYPDLRVRGNRIALPLGLDGAEPALAACAAARLPVRATWIDYGGGGSG*
Ga0075284_101189513300005885Rice Paddy SoilMLPGAPSRLHSSFPLRRALGLVHPGDLLGAWVRVGKWPLSLRAGGRALLASPDLGYLLRRCGRVLVRHGHRAVVLSADRLIAWRTLQIVVGAPFLPRVQELRAIYPDLRVRGNRIALPLGLDGAEPALAACAAARLPVRATWIDYGGGGSG*
Ga0075282_102022723300005896Rice Paddy SoilMLPGAVSRLPSAFPLRRALAHAHPGDPLGAWVRVSRWPLHLRAGGRVLLAGHDLGYLLRRCARVLVSRGGHAAALTAEQLIAWRTLQIAIASPYVPAVEQLRALHPRLRVTPGRIVLPLGLDGAEAALAFC
Ga0070712_10127628823300006175Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLPPSFPLRRALAFAHPGEPLGAWVRMGRWPLHLRAGGCSLVASTDMGFLLRRVAHVLVRDGQRPVALDAERLIAWRTLQIVVGTPYLPELAELRELYPALRVSQGRITLPLGLGGGERALALCAQAGLPVTG
Ga0079222_1000623123300006755Agricultural SoilMLPGAPSRLPPSFPLRRALAFAHPGELLGAWVRVCRWPLHLRAGGCALLAGTDLGFLLRRSGRVLVRSGGRAVALAAEQLIAWRTLQIAVGAPYLPQLHELRALYPDIRVTRDRIALPIGLGDGASALAACAQAGLRVAGTWIEYGTESSG*
Ga0079222_1049874823300006755Agricultural SoilMLPGAVSRLPSAFPLRRALAHAHPGDPLGAWVRVSRWPLHLRACGRALLAGHDLGYLLRRCARVLVSRGGRPAVLSAEQLIARRTLHIAVASPCLPPLEALRTLHPRLHVSQGRIALPLGLAGAEPALAFCAAARIPVSATWIDYEDAGSG*
Ga0079222_1222745013300006755Agricultural SoilVAKRWGTTAAPRPSSAMLPGALSRLPPSFPLRRALAFAHPGELLGAWVRVCRWPLHLRAGGCALLTGTDLGLLLRRCGRVVVRNGGRAVPLAAEQLIAWRTLQIAVGAPYLPGLRELRELYPGLRVTRDGIALPIGLGDGASALAFCARTGLSVAGSWIEYGVESSG*
Ga0079221_1068654223300006804Agricultural SoilMLPGAVSRLPSAFPLRRALAHAHPGDPLGAWVRVSRWPLHLRACGRALLAGHDLGYLLRRCARVLVLRGGRPAVLSAEQLIAWRTLHIAVASPCLPPLEALRTLHPRLHVSQGRIALPLGLDGAEPALAFCAAARIPVSATWIDYEDAGSG*
Ga0079220_1034726413300006806Agricultural SoilMLPGAPSRLPPSLPLRRALAFAHPGELLGAWVRLCRWPLHLRAGGCALLAGTDLGFLLRRAGRVLIRIGERPVALPAEQLIAWRTLQIAVGAPYLPAVAELRELYPGLRVAHGRIALPLGLGDGAAALAFCARAGLPVAGSWVEYEGQTSG*
Ga0075428_10054900213300006844Populus RhizosphereMFPGAPSRLRSSYPLRHALGLAHPGEPLGAWVRAARWPLHLRAGGRALLASGDLGFLLRRCLRVLVRAEGTPQVLEADTLIEWRTLQIVVGAPYLPQAQALRALFPRLTVANGRLSLPLGLDAPEPALAACAAARLSVAASWIEYRASGSR*
Ga0075421_10068322523300006845Populus RhizosphereMFPGAPSRLRSSYPLRHALGLAHPGEPLGAWVRAARWPLHLRAGGRALLASGDLGFLLRRCLRVLVRAEGTPQVLGADTLIEWRTLQIVVGAPYLPQAQALRALFPRLTVANGRLSLPLGLDAPEPALAACAAARLSVAASWIEYRASGSR*
Ga0075430_10092258113300006846Populus RhizosphereEERWRVPPWSLPSCRMFPGAPSRLRSSYPLRHALGLAHPGEPLGAWVRAARWPLHLRAGGRALLASGDLGFLLRRCLRVLVRAEGTPQVLGADTLIEWRTLQIVVGAPYLPQAQALRALFPRLTVANGRLSLPLGLDAPEPALAACAAARLSVAASWIEYRASGSR*
Ga0075433_1010646433300006852Populus RhizosphereMLPGAPSRLPSSFPLRRALALAHPGEPLGAWVRLGRWPLHLRAGGRALLASDDLGFLLRRCSRVVVRNGARTIALEAERLIAWRTLQIVVGAPYLPQLSELRALFPGLRVAEGRIALPLGLDGAEPALAACAAARVPVAGTWIEYRAAHSG*
Ga0075433_1053805913300006852Populus RhizosphereTEKRWDTKPASMPSSAMLPGAPSRLPPSFPLRRALAFAHPGEPLGAWVRMGRWPLHLRAGGCALLASADLGLLLGRAGRVLIRSGQLPLVVGAEQLITWRTLQITLGAPYLPELRELRALYPGLRVSQGRIALPLGLGSGAAALAFCAQAGLAVTGSWIEYEAISSG*
Ga0075425_10037317923300006854Populus RhizosphereMLPGAPSRLPSSFPLRRALALAHPGEPLGAWVRLGRWPLHLRAGGRALLASDDLGFLLRRCSRVVVRNGARTIALEAERLIAWRTLQIVVGAPYLPQLSELRALFPGLRVAEGRIELPLGLDGAEPALAACAAARVPVAATWIEYRAAHSG*
Ga0075425_10065814423300006854Populus RhizosphereMLPGAPSRLPSSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASPDLGYLLRRCGRVLVRNGPRPTVLDAERLIAWRTLQIVVGAPFLPRVRELRALYPGLQVSGGRISLPLGLGGAEPALAACAAARLPVTATWIEYRDAGSG*
Ga0075425_10076373823300006854Populus RhizosphereMLPGAPSRLPVSFPLRRALAYAHPGDPLGAWVRMGRWPLHLRAGGCALLASADLGFLLRRTAQVLVRSGQRPAVLPAERLIAWRTLQIVVGTPYLPELRELQALYPGLRVGQGCIALPLGLGGGEAALALCAQAGMPVSASWIEYEAAGSG*
Ga0075426_1039599423300006903Populus RhizosphereMVPGAPSRLPASFPLRRALGLAHPGEPLGAWVRMGRWPLHLRAGGCALLASAELAYLLRRCARVLVRDGARPRILEAERLIALRTLQIVVGAPYLPDVNELKLLYPRLHVAEGKIALPLGLDGAEPALAACVAARLPVAATWIEYRDAGS
Ga0075424_10025745823300006904Populus RhizosphereMLPGAPSRLPSSFPLRRALALAHPGEPLGAWVRLGRWPLHLRAGGRALLASDDLGFLLRRCARVVVRNGARVSALEAERLIAWRTLQIVVGAPYLPQLSELRALFPGLRVAEGRIALPLGLDGAEPALAACAAARVPVAGTWIEYRAAHSG*
Ga0075424_10139263923300006904Populus RhizosphereMLPGAPSRLPSSFPLRRALAFAHPGELLGAWVRMGRWPLHLRAGGCALLASADLGLLLGRAGRVLIRSGQLPLVVGAEQLITWRTLQITLGAPYLPELRELRALYPGLRVSQGRIALPLGLGSGAAALAFCAQ
Ga0075423_1203040513300009162Populus RhizosphereSRLPSSFPLRRALAFAHPGELLGAWVRMGRWPLHLRAGGCALLASADLGLLLGRAGRVLIRSGQLPLVVGAEQLITWRTLQITLGAPYLPELRELRALYPGLRVSQGRIALPLGLGSGAAALAFCAQAGLAVTGSWIEYEATSSG*
Ga0105242_1145985023300009176Miscanthus RhizosphereLLRRALAFAHPGEPLGAWVRMGRWPLHLRARGRALLASSDLGFLLRRCGRVVVRDSHSAVALDAERLIAWRTLQIVVGAPFLPAVRELRALYPGLRVDNGRIALPLGLDGAEPALAACAAARVPVAATWIDYGGARSG*
Ga0126315_1091276913300010038Serpentine SoilMLPGAPARLHPSYPLRRALELAHPGERLGAWVRGARKPLPLRAGGRDLICASDLGYLLRRCLRVLVRQRAEVLACEADELIAWRTLQIVVGAPYLPRLTGLRDLCPELRLGPGRIAVPLGLGPAEPILVACAAARVPVAATWIDYRRPPRIPSSET*
Ga0126308_1062524123300010040Serpentine SoilDRLPEPLCRMLPGAPSRLHPSYPLRRALELAHPGELLGAWVRGASKPLPLRAGGRDLICASDLGYLLRRCLRVLVRRRAEVLACEADELIAWRTLQIVVGAPYLPRLTGLRDLCPELRVGPGRIAVPLGLGPAEPILVACASARVPVAATWIDYRRPPRTKASET*
Ga0126311_1027310523300010045Serpentine SoilPEPLCRMLPGAPSRLHPSYPLRRALELAHPGERLGAWVRGARKPLPLRAGGRDLICASDLGYLLRRCLRVLVRQRAEVLACEADELIAWRTLQIVVGAPYLPRLTGLRDLCPELRLGSGRIAVPLGLGPAEPILVACAAARVPVAATWIDYRRPPRIPSSET*
Ga0134121_1183927423300010401Terrestrial SoilMFPGAPSRLPSSYPLRHALGFAHPGESLGAWVRAARWPFHLRAGGRDLLIGTDLGFLLRRCRRVLLRVGGRPLVLASETLIEWRTLQIVVGTPYLPRIDEVRSLFPRLIVGEGRLSLPLGPEPPEPALAACAAARLAVTSTRIEYRAPA
Ga0137404_1165716423300012929Vadose Zone SoilALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCARVLVRDGETAIVLEADRLIAWRTLQIVVGTPYLPEVHALRAMYPGLRVAHGRIALPIGLDGAEPALAACAAARVPVAATWIEYDGGRSG*
Ga0164301_1054836513300012960SoilSGMLPGAPSRLPPSFPLRRALAFAHPGEPLGAWVRMGRWPLHLRAGGCSLVASTDMGFLLRRVAHVLVRDGQRPVALDAERLIAWRTLQIVVGAPYLPELAELRELYPALRVSHGRITLPLGLGGGEKALALCAQAGLPVTGSRIEYESTAGSG*
Ga0164301_1094413313300012960SoilHPGEPLGAWVRMGRWPLHLRAGGCALLASADLGFLLRRTAQVLVRSGERPAVLAAERLIAWRTLQIVVGTPYLPELRELQTLYPGLRVGHGRIALPLGLGGGEAALALCAQAGVPISASWIEYEAAGSG*
Ga0164302_1138347213300012961SoilSSFPLRRALAFAHPGELLGAWVRMGRWPLHLRAGGCALLASADLGLLLGRAGRVLIRTGQLPLVVRAEQLISWRTLQITLGAPYLPELRELRALYPGLRVSQGRIALPLGLGSGAAALAFCAQAGVAVTGSWIEYEAASSG*
Ga0164308_1179944713300012985SoilSSGMLPGAPSRLPPSFPLRRALAFAHPGEPLGAWVRMGRWPLHLRAGGCSLVASADMGFLLRRVAHVLVRDGQRPVALDAERLIAWRTLQIVVGAPYLPELAELRELYPALRVSEGRITLPLGLGGGEKALALCAQAGLPVTSSRIEYESTAGSG*
Ga0164304_1016933833300012986SoilMLPGAPSRLPSSFPLRRALAFAHPGELLGAWVRMGRWPLHLRAGGCALLASADLGLLLGRAGRVLIRTGQLPLVVRAEQLITWRTLQITLGAPYLPELRELRALYPGLRVSQGRIALPLGLGSGAAALAFCAQAGVAVTGSWIEYEAASSG*
Ga0132258_1121732223300015371Arabidopsis RhizosphereMLPGAPSRLPSSFPLRRALAFAHPGELLGAWVRLCRWPLHLRAGGCALLAGTDLGFLLRRAGRVLVRTGERPVALPAEQLIAWRTLQIAVGAPYLPAVGELRELYPGLRVAHGRIALPLGLGNGAAALAFCARAGVPVAGSWVAYEGETSG*
Ga0184621_1022882313300018054Groundwater SedimentCTRFRWHPGTRPAPSSAMLPGAPSRLPTSFPLRRALGLSHPGDPLGAWVRMGRCPLHLRAGGRALLASTDLGYLLRRCARVLVRDGEAAIPLEADQLIAWRTLQIVVGAPYLPEVQALRAMYPGLRVAQGRIALPIGLDGAEPALAACAAARVPVAATWIAYDGGRSG
Ga0184615_1008540123300018059Groundwater SedimentMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCSRVLVRDAEAAIVLEADRLIAWRTLQIVVGAPYLPEVHVLRAMYPGLRIAQGRIALPIGLDGAEPALATCAAARVPVAATWIEYDGGRSG
Ga0184619_1046985913300018061Groundwater SedimentMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCACVLVRAGEAAVVLEADQLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVTQGRIALPIGLDGAEPALAACAAA
Ga0137408_132909523300019789Vadose Zone SoilMLPGAPSRLPSSFPLRRALGLTHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCGRVLVRNGPRPTVLDAERLIAWRTLQIVVGAPFLPRVRELRALYPGLQVSGGRISLPLGLGGAEPALAACAAARLPVTATWIEYRDAGSG
Ga0209342_1011394013300025326SoilMLPGAPSRLPSTFPLRRALGLAHPGEPLGAWVRTGRWPLHLRAGGRALLASADLAYLLRRCPRVLVRDGVRPTILDAERLIAWRTLQIVVGAPYLPDVRELRAMFPGLRVAQGRIALPLGLDGAEPALAACAAARLPVAATWIEYRDAGSG
Ga0209751_1029988313300025327SoilTRPPTRTWRMLPGAPSRLPSTFPLRRALGLAHPGEPLGAWVRTGRWPLHLRAGGRALLASADLAYLLRRCPRVLVRDGARPTILDAERLIAWRTLQIVVGAPYLPDVRELRAMFPGLRVAQGRIALPLGLDGAEPALAACAAARLPVAATWIEYRDAGSG
Ga0210142_100202713300025552Natural And Restored WetlandsTAFPLRRALGLTHPGDPLGAWVRMGRWPLHLRAGGCALLASADLGYLLRRCARVVVRDGAAAVVLEADRLIAWRTLQIVIGAPYLPEVHALRAMYPGLRVAHGRIALPIGLDGAEPALAACAAARVPVAATWIDYAGGSSG
Ga0210120_100762113300025556Natural And Restored WetlandsMLPGAPSRLPTSFPLRRALGLTHPGDPLGAWVRMGRWPLHLRAGGCALLASADLGYLLRRCARVVVRDGAAAVVLEADRLIAWRTLQIVIGAPYLPEVHALRAMYPGLRVAHGRIALPIGLDGAEPALAACAAARVPVAATWIDYAGGSSG
Ga0207684_1015072623300025910Corn, Switchgrass And Miscanthus RhizosphereMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCARVLVRDGETAIVLEADRLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVAHGRIALPIGLDGAEPALAACAAARVPVAATWIEYHGGHSG
Ga0207707_1038123723300025912Corn RhizosphereMLPGAPSRLLPSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASTDLGYLLRRCTRVLVRDGEAAIVLEADQLIAWRTLQIVVGAPYLPEMQALRALYPGLRVAAGRIALPIGLDGAEPALAVCAATRLPVTATWIEYEAGRSG
Ga0207646_1028491033300025922Corn, Switchgrass And Miscanthus RhizosphereRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCARVLVRDGETAIVLEADRLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVAHGRIALPIGLDGAEPALAACAAARVPVAATWIEYHGGHSG
Ga0207641_1003894043300026088Switchgrass RhizosphereMLPGAPSRLPVSFPLRRALAYAHPGDPLGAWVRMGRWPLHLRAGGCALLASADLGFLLRRTAQVLVRSGQRPAVLPAERLIAWRTLQIVVGTPYLPELRELQALYPGLRVGQGCIALPLGLGGGEAALALCAQAGMPVSASWIEYEAAGSG
Ga0207641_1234211713300026088Switchgrass RhizosphereRMRPCRMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRCPLHLRAGGRALLASTDLGYLLRRCVRVLVRDGEAAIVLEADQLIAWRTLQIVLAAPYLPEVHALRAMYPGLRVAQGRIALPIGLDGAEPALAVCAAARLPVTATWIEYDGGRSG
Ga0207676_1004634233300026095Switchgrass RhizosphereMLPGAPSRLPSSFPLRRALAYAHPGEPLGAWVRMGRWPLHLRAGGCALLASADLGFLLRRTAQVLVRSGERPAVLPAERLIAWRTLQIVVGTPYLPELRELQALYPGLRAGHGRIALPLGLGGGEAALAVCTQAGIAVSASWIEYEGAGSG
Ga0207676_1008301023300026095Switchgrass RhizosphereMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRCPLHLRAGGRALLASTDLGYLLRRCVRVLVRDGEAAIVLEADQLIAWRTLQIVLAAPYLPEVHALRAMYPGLRVAQGRIALPIGLDGAEPALAVCAAARLPVTATWIEYDGGRSG
Ga0207674_1038464213300026116Corn RhizosphereWCHLRRPPMRPCRMLPGAPSRLPTSFPLRRALGLSHPGDPLGAWVRMGRWPLHLRAGGRALLASTDLGYLLRRCTRVLVRDGEAAIVLEADQLIAWRTLQIVVGAPYLPEMQALRALYPGLRVAAGRIALPIGLDGAEPALAVCAATRLPVTATWIEYEAGRSG
Ga0209682_1002366923300027716Wetland SedimentMLPGAPSRLPSSFPLRRALGLTHPGELLGAWVRTGRWPLHLRAGGRALLASADLGYLLRRCRRVLVRDGAQPAILDAERLIAWRTLQIVVGAPYLPEVPQLRAMFPGLRVAEGRITLPLGLDGAEAALAACAAARLPVAATWIEYRDAGSG
Ga0209074_1000319123300027787Agricultural SoilMLPGAPSRLPPSFPLRRALAFAHPGELLGAWVRVCRWPLHLRAGGCALLAGTDLGFLLRRSGRVLVRSGGRAVALAAEQLIAWRTLQIAVGAPYLPQLHELRELYPDIRVTRDRIALPIGLGDGASALAACAQAGLRVAGTWIEYGTESSG
Ga0209683_1004523413300027840Wetland SedimentMLPGAPSRLPSSFPLRRALGLTHPGELLGAWVRTGRWPLHLRAGGRALLASADLGYLLRRCRRVLVRDGAQPAILDAERLIAWRTLQIVVGAPYLPDVPQLRAMFPGLRVAEGRITLPLGLDGAEAALAACAAARLPVAATWIEYRDAGSG
Ga0209382_1094295923300027909Populus RhizosphereMFPGAPSRLRSSYPLRHALGLAHPGEPLGAWVRAARWPLHLRAGGRALLASGDLGFLLRRCLRVLVRAEGTPQVLGADTLIEWRTLQIVVGAPYLPQAQALRALFPRLTVANGRLSLPLGLDAPEPALAACAAARLSVAASWIEYRASGSR
Ga0307293_1030340813300028711SoilGHQSRMGSGDLYRPTGFRWRSGTGPVPSSAMLPGAPSRLPPSFPLRRALGLAHPGDPLGAWVRMGRCPLHLRAGGRALLASTDLGYLLRRCARVLVRDGEAAILLEADQLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVAQGRIALPIGLDGAEPALAACAAARLPV
Ga0307320_1007998623300028771SoilMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRCPLHLRAGGRALLASTDLGYLLRRCARVLVRDGEAAILLEADQLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVAQGRIALPIGLDGAEPALAACAAARVPVTATWIEYDGGRSG
Ga0307284_1026577813300028799SoilMLPGAPSRLPTSFPLRRALGLSHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCACVLVRDGEAAVVLEADQLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVARGRIALPIGLDGAEPVLAACAAARVPVAATWIEYDGGRS
Ga0307281_1011748813300028803SoilRSRMRPCRMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCSRVLVRDAEAAIVLEADRLIAWRTLQIVVGAPYLPEVHVLRAMYPGLRIAKGRIALPIGLDGAEPALAACAAARVPVAATWIEYDGGRSG
Ga0307305_1033548613300028807SoilMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCACVLVRDGEAAVVLEADQLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVARGRIALPIGLDGAEP
Ga0247825_1086865513300028812SoilMLPGAPSRLYPSYPLRRALGLAHPGDLLGAWVGRVRWPLHLRAGGRALLIAGDLGFLLRRCGHVLVRHRDAALVLDADRLIAWRTLQIVVGAPYLPQVQALCAIYPGLRVARGRIALPIGLDGAEPALAACAAARVPVAATWIDYGGPGSG
Ga0307310_1025022413300028824SoilGRRSECADPPRPGAPHGLRCVAFDSRCSGDLHRCTRFRWHPGARPAPSSAMLPGAPSRLPTSFPLRRALGLSHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCARVLVRDGEAAIVLEADQLIAWRTLQIVIGAPYLPEVHALRAMYPGLRVARGRIALPIGLDGAEPALAACAAARVPVAATWIEYDGGRSG
Ga0307277_1009459713300028881SoilMLPGAPSRLLPSFPLRRALGLAHPGDPLGAWVRMGRCPLHLRAGGRALLASTDLGYLLRRCARVLVRDGEAAILLEADQLIAWRTLQIVVGAPYLPEVHALRAMFPGLRVAQGRIALPIGLDGAEPALAACAAARVPVTATWIEYDGGRSG
Ga0307308_1053825713300028884SoilMLPGAPSRLPTSFPLRRALGLAHPGDPLGAWVRMGRWPLHLRAGGRALLASADLGYLLRRCACVLVRDGEAAVVLEADQLIAWRTLQIVVGAPYLPEVHALRAMYPGLRVARGRIALPIGLDGAEPALAACAAARVPVAATWIEY
(restricted) Ga0255310_1019427213300031197Sandy SoilMLPGAPSRLPSSFPLRRALGLAHPGEPLGAWVRRGRWPLHLRAGGRALLASADLGYLLRRCPRVLFRDGRSAVVLEAERLIAWRTLQIVVGTPYLPEVPMLRAMYPALRIAGGRIALPIGLDGAEPALAACAAAR
(restricted) Ga0255312_106066113300031248Sandy SoilRFPMRPCRMLPGAPSRLPSSYPLRRALGLAHPGDPLGAWVRMVRWPLHLRAGGRALLASADLGYLLRRCPRVLFRDGRSAVVLEAERLIAWRTLQIVVGTPYLPEVPMLRAMYPALRIAGGRIALPIGLDGAEPALAACAAARVPVAATWIEYEAAGSG
Ga0307408_10012259933300031548RhizosphereMLPGAPSRLHPSYPLRRALGLAHPGDPLGAWVRMVRWPLHLRAGGRALLASADLGYLLRRCGAVLVRHAESAAVLEADRLIAWRTLQIVVGAPYLPDVRVLRAMYPGLRLAPGRIALPIGLDGAEPALAACAAARVPVAATWIEYGVPGSG
Ga0310813_1052122613300031716SoilMLPGAPSRLPSSFPLRRALAYAHPGEPLGAWVRMGRWPLHLRAGGCALLASADLGFLLRRTAQVLVRSGERPAVLPAERLIAWRTLQIVVGTPYLPELRELQALYPGLRVGHGRITLPLGLDGGEAALAVCAQAGMAVSATWIEYEAAGSG
Ga0307469_1185927213300031720Hardwood Forest SoilKRWHPRTRAARSSGMLPGAPSRLPPSFPLRRALAFAHPGEPLGAWVRMGRWPLHLRAGGRALLASADLAYLLRRSARVLVRHGGRPRIVQSERLIAWRTLQIVVGAPYLPDEDGLRAIYPGLRVAEGRIALPLGLEGAEPALAACAAARVPVAATWIEYRDAASG
Ga0307405_1054272913300031731RhizosphereGLAHPGDPLGAWVRMVRWPLHLRAGGRALLASADLGYLLRRCGAVLVRHAESAAVLEADRLIAWRTLQIVVGAPYLPDVGVLRAMYPGLRLAPGRIALPIGLDGAEPALAACAAARVPVAATWIEYGVPGSG
Ga0307413_1001665643300031824RhizosphereMLPGAPSRLHSSFPLRRALGLAHPGDLLGAWVRVGRWPLCLRADGRALLAGTDLGYLLRRCGRVLVRHGRRVMVMDADRLIAWRTLQIVVGAPFLPQVQELRALYPDLRVAGGRIALPLGLDGAEPALAACAAARVPVTATWIEYGGAPSG
Ga0307413_1004598643300031824RhizosphereMLPGAPARLHPSYPLRRALELAHPGERLGAWVRGARKPLPLRAGGRDLICASDLGYLLRRCLRVLVRQRAEVLACEADELIAWRTLQIVVGAPYLPRLTGLRDLCPELRLGPGRIAVPLGLGPAEPILVACAAARVPVAATWIDYRRPPRIPSSET
Ga0307410_1036468923300031852RhizosphereEPLCRMLPGAPARLHPSYPLRRALELAHPGERLGAWVRGARKPLPLRAGGRDLICASDLGYLLRRCLRVLVRQRAEVLACEADELIAWRTLQIVVGAPYLPRLTGLRDLCPELRLGPGRIAVPLGLGPAEPILVACAAARVPVAATWIDYRRPPRIPSSET
Ga0307406_1002480833300031901RhizosphereMLPGAPSRLHSSFPLRRALGLTHPGDLLGAWVRVGRWPLRLRAGGRALLAGTDLGYLLRRCGRVLVRHGHRAVVLDADRLIAWRTLQIVVGAPFLPQVRELRAIYPNLRIAGGRITLPVGLDGPEPALAACAAARLPVSATWIDYRGESSG
Ga0307412_1027084123300031911RhizosphereMLPGAPSRLHSSFPLRRALGLTHPGDLLGAWVRVGRWPLRLRAGGRALLAGTDLGYLLRRCGRVLVRHGHHAVVLDADRLIAWRTLQIVVGAPFLPQVRELRAIYPNLRIAGGRITLPVGLDGPEPALAACAAARLPVSATWIDYRGESSG
Ga0308175_10002257843300031938SoilMAAPVPLSAMLPGALSRLPPSFPLRRALAFAHPGELLGAWVRVCRWPLHLRAGGCALLTGVDLGFLLRRCGRVVVRSGGRALALGAEQLIAWRTLQIAVGAPYLPELRELCEIYPGIRITRGRIALPIGLGDGASALAFCARAGLPVAGSWIEYGGESSG
Ga0326597_1003724323300031965SoilMLPGAPSRLPSSFPLRRALGLAHPGEPLGAWVRTGRWPLHLRAGGRALLASADMGYLLRRCPRVLVRNGARPTILEAERLIAWRTLQIVVGAPYLPDVPELRAMFPGLRVAEGRIALPLGLDGAEPALAACAAARLPVAATWIEYRDADSG
Ga0307416_10001792433300032002RhizosphereMLPGAPSRLHSSFPLRRALGLTHPGDLLGAWVRVGRWPLRLRAGGRALLAGTDLGYLLRRCGRVLVRHGHRAVVLEADRLIAWRTLQIVVGAPFLPQVRELRAIYPNLRIAGGRITLPVGLDGPEPALAACAAARLPVSATWIDYRGESSG
Ga0307414_1016649233300032004RhizosphereERWHPDGPAAPPSGMLPGAPSRLHSSFPLRRALGLAHPGDLLGAWVRVGRWPLCLRADGRALLAGTDLGYLLRRCGRVLVRHGRRVMVMDADRLIAWRTLQIVVGAPFLPQVQELRALYPDLRVAGGRIALPLGLDGAEPALAACAAARVPVTATWIEYGGAPSG
Ga0307411_1209253213300032005RhizosphereMLPGAPARLHPSYPLRRALELAHPGERLGAWVRGARKPLPLRAGGRDLICASDLGYLLRRCLRVLVRQRAEVLACEADELIAWRTLQIVVGAPYLPRLTGLRDLCPELRLGPGRIAVPLGLGPAEPILVACAAARV
Ga0307471_10326473213300032180Hardwood Forest SoilMLPGAPSRLPPSFPLRRALAFAHPGEPLGAWVRMGRWPLHLRAGGCSLVASTDMGFLLRRVAHVLVRDGQRPVALDAERLIAWRTLQIVVGAPYLPELAELRELYPALRVSQGRITLPLGLGGGERALALCAQAGLPVTGSSIEYESTAGSG
Ga0316620_1062483523300033480SoilMLPGAPSRLPFSFPLRRALSLAHPGELLGAWVRAGQRPLRLRAGGCALLVSADLGYLLRRCGRVVVRDGARPAAMEADRLIAWRTLQIVTGAPYLPHVRELRAMYPGLRVSGGRIALPLGLDGAEPALAACAAARLPVRATWIEYGGGGSG


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