Metagenome / Metatranscriptome Family F076310

Basic Information
Family ID	F076310
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	57 residues
Representative Sequence	MKAIKTYPTRVEADLAKIALDAAGVPSVVVGVGVGMEGGAAGVQLLVPDECVEAALT
Number of Associated Samples	103
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.73 %
% of genes near scaffold ends (potentially truncated)	55.08 %
% of genes from short scaffolds (< 2000 bps)	83.90 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Most Common Taxonomy
Group	Bacteria (73.729 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.797 % of family members)
Environment Ontology (ENVO)	Unclassified (19.492 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.237 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.71% β-sheet: 17.65% Coil/Unstructured: 57.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF09413	DUF2007	28.81
PF00578	AhpC-TSA	2.54
PF00111	Fer2	2.54
PF13924	Lipocalin_5	2.54
PF00072	Response_reg	1.69
PF02775	TPP_enzyme_C	1.69
PF13442	Cytochrome_CBB3	1.69
PF13411	MerR_1	1.69
PF01740	STAS	0.85
PF12833	HTH_18	0.85
PF02798	GST_N	0.85
PF04909	Amidohydro_2	0.85
PF03741	TerC	0.85
PF07589	PEP-CTERM	0.85
PF02975	Me-amine-dh_L	0.85
PF00210	Ferritin	0.85
PF12222	PNGaseA	0.85
PF13683	rve_3	0.85
PF00753	Lactamase_B	0.85
PF13531	SBP_bac_11	0.85
PF09924	LPG_synthase_C	0.85
PF16694	Cytochrome_P460	0.85
PF13231	PMT_2	0.85
PF13669	Glyoxalase_4	0.85
PF08327	AHSA1	0.85
PF04349	MdoG	0.85
PF04191	PEMT	0.85
PF01494	FAD_binding_3	0.85
PF04229	GrpB	0.85
PF02900	LigB	0.85
PF00155	Aminotran_1_2	0.85
PF12158	DUF3592	0.85
PF00175	NAD_binding_1	0.85
PF00034	Cytochrom_C	0.85
PF03551	PadR	0.85
PF13410	GST_C_2	0.85
PF02852	Pyr_redox_dim	0.85
PF00196	GerE	0.85
PF13561	adh_short_C2	0.85
PF00106	adh_short	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.69
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.85
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.85
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.85
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.85
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.85
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.85
COG3131	Periplasmic glucan biosynthesis protein OpgG	Cell wall/membrane/envelope biogenesis [M]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.73 %
Unclassified	root	N/A	26.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.73 %
Unclassified	root	N/A	26.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.73 %
Unclassified	root	N/A	26.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.44 %
Unclassified	root	N/A	26.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.69 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.39 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.54 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.54 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.69 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.54 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.54 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1.69 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.85 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.85 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.85 %
unclassified Chromatiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales	0.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.85 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.54 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.54 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.69 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.85 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.85 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.85 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %
Chromatiales bacterium 21-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium 21-64-14	0.85 %
Paracoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus	0.85 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.85 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.85 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.85 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.54 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.54 %
Steroidobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	1.69 %
Paracoccus laeviglucosivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus laeviglucosivorans	0.85 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.85 %
Oscillatoriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae	0.85 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.85 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.85 %
Caballeronia sordidicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia sordidicola	0.85 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.85 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.85 %
Chromatiales bacterium 21-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium 21-64-14	0.85 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.85 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.54 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.54 %
Steroidobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	1.69 %
Granulicella sp. S190	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S190	0.85 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.85 %
Phormidium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Phormidium	0.85 %
Paracoccus laeviglucosivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus laeviglucosivorans	0.85 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.85 %
Caballeronia sordidicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia sordidicola	0.85 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.85 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.85 %
Chromatiales bacterium 21-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium 21-64-14	0.85 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.85 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.54 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.54 %
Steroidobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	1.69 %
Phormidium tenue	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Phormidium → Phormidium tenue	0.85 %
Granulicella sp. S190	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S190	0.85 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.85 %
Paracoccus laeviglucosivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus laeviglucosivorans	0.85 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.85 %
Caballeronia sordidicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia sordidicola	0.85 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.85 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.85 %
Chromatiales bacterium 21-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium 21-64-14	0.85 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.85 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908006\|FWIROz_GKA24FP02HIWI0	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105802792	All Organisms → cellular organisms → Bacteria → Proteobacteria	1323	Open in IMG/M
3300004080\|Ga0062385_10043660	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300004082\|Ga0062384_100814362	Not Available	653	Open in IMG/M
3300004091\|Ga0062387_100986551	Not Available	644	Open in IMG/M
3300004092\|Ga0062389_100997773	Not Available	1022	Open in IMG/M
3300004092\|Ga0062389_101919504	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300004635\|Ga0062388_100974354	Not Available	821	Open in IMG/M
3300005177\|Ga0066690_10493021	Not Available	825	Open in IMG/M
3300005335\|Ga0070666_10450852	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300005367\|Ga0070667_100435724	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
3300005434\|Ga0070709_10444252	All Organisms → cellular organisms → Bacteria → Proteobacteria	976	Open in IMG/M
3300005435\|Ga0070714_101754364	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300005545\|Ga0070695_101130783	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005548\|Ga0070665_100868155	Not Available	915	Open in IMG/M
3300005560\|Ga0066670_10020429	All Organisms → cellular organisms → Bacteria	3069	Open in IMG/M
3300005843\|Ga0068860_100422191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1322	Open in IMG/M
3300006031\|Ga0066651_10148433	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300006050\|Ga0075028_100413864	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300006052\|Ga0075029_100068759	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300006052\|Ga0075029_101360001	Not Available	500	Open in IMG/M
3300006176\|Ga0070765_100182766	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300006796\|Ga0066665_11302156	Not Available	558	Open in IMG/M
3300006844\|Ga0075428_100159469	All Organisms → cellular organisms → Bacteria	2449	Open in IMG/M
3300006876\|Ga0079217_11370401	Not Available	551	Open in IMG/M
3300006918\|Ga0079216_10886149	Not Available	670	Open in IMG/M
3300007004\|Ga0079218_10693838	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300009090\|Ga0099827_11736003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300009100\|Ga0075418_10576259	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300009789\|Ga0126307_11580945	Not Available	532	Open in IMG/M
3300010040\|Ga0126308_10322640	All Organisms → cellular organisms → Bacteria → Proteobacteria	1019	Open in IMG/M
3300010166\|Ga0126306_11220397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Phormidium → Phormidium tenue	618	Open in IMG/M
3300010371\|Ga0134125_10116564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2973	Open in IMG/M
3300010376\|Ga0126381_104072812	All Organisms → cellular organisms → Bacteria → Nitrospirae	568	Open in IMG/M
3300010398\|Ga0126383_12642293	Not Available	585	Open in IMG/M
3300012202\|Ga0137363_11157938	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300012203\|Ga0137399_11764297	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012388\|Ga0134031_1133511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	594	Open in IMG/M
3300012927\|Ga0137416_10124965	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300012957\|Ga0164303_10460414	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300012977\|Ga0134087_10656141	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300013306\|Ga0163162_11301910	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300013308\|Ga0157375_10700064	Not Available	1167	Open in IMG/M
3300015264\|Ga0137403_10344874	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300015371\|Ga0132258_10984196	All Organisms → cellular organisms → Bacteria	2131	Open in IMG/M
3300015372\|Ga0132256_101092134	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300017937\|Ga0187809_10264278	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300017947\|Ga0187785_10045607	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300017947\|Ga0187785_10273411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	766	Open in IMG/M
3300017961\|Ga0187778_10282329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia sordidicola	1072	Open in IMG/M
3300018058\|Ga0187766_11308442	Not Available	528	Open in IMG/M
3300018086\|Ga0187769_10120014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus laeviglucosivorans	1904	Open in IMG/M
3300018422\|Ga0190265_10972473	Not Available	971	Open in IMG/M
3300018481\|Ga0190271_13585285	Not Available	520	Open in IMG/M
3300020580\|Ga0210403_10882288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	706	Open in IMG/M
3300020581\|Ga0210399_10815270	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300020582\|Ga0210395_10064141	All Organisms → cellular organisms → Bacteria → Proteobacteria	2695	Open in IMG/M
3300021168\|Ga0210406_10437129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1043	Open in IMG/M
3300021168\|Ga0210406_10798648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	718	Open in IMG/M
3300021402\|Ga0210385_10269608	Not Available	1255	Open in IMG/M
3300021402\|Ga0210385_11475619	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300021403\|Ga0210397_11284679	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300021405\|Ga0210387_10217141	All Organisms → cellular organisms → Bacteria → Proteobacteria	1664	Open in IMG/M
3300021406\|Ga0210386_10137651	All Organisms → cellular organisms → Bacteria → Proteobacteria	2033	Open in IMG/M
3300021406\|Ga0210386_10437544	Not Available	1129	Open in IMG/M
3300021407\|Ga0210383_10102507	All Organisms → cellular organisms → Bacteria → Proteobacteria	2408	Open in IMG/M
3300021407\|Ga0210383_10540997	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300021474\|Ga0210390_10370161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	1212	Open in IMG/M
3300021474\|Ga0210390_10776877	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	794	Open in IMG/M
3300021474\|Ga0210390_11492056	Not Available	535	Open in IMG/M
3300021477\|Ga0210398_10054447	All Organisms → cellular organisms → Bacteria	3279	Open in IMG/M
3300022413\|Ga0224508_10006543	All Organisms → cellular organisms → Bacteria → Proteobacteria	9154	Open in IMG/M
3300025906\|Ga0207699_10402074	All Organisms → cellular organisms → Bacteria → Proteobacteria	976	Open in IMG/M
3300025928\|Ga0207700_10015296	All Organisms → cellular organisms → Bacteria → Proteobacteria	5055	Open in IMG/M
3300025934\|Ga0207686_10430374	Not Available	1011	Open in IMG/M
3300026095\|Ga0207676_11064378	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300026142\|Ga0207698_11252107	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300026309\|Ga0209055_1186139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	639	Open in IMG/M
3300026523\|Ga0209808_1320258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	502	Open in IMG/M
3300027528\|Ga0208985_1013906	Not Available	1536	Open in IMG/M
3300027648\|Ga0209420_1184689	Not Available	559	Open in IMG/M
3300027829\|Ga0209773_10233405	Not Available	769	Open in IMG/M
3300027886\|Ga0209486_10768765	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300027895\|Ga0209624_10134396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium 21-64-14	1630	Open in IMG/M
3300027908\|Ga0209006_10130321	All Organisms → cellular organisms → Bacteria → Proteobacteria	2216	Open in IMG/M
3300027908\|Ga0209006_10294339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1387	Open in IMG/M
3300028780\|Ga0302225_10314815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	741	Open in IMG/M
3300028792\|Ga0307504_10007649	Not Available	2339	Open in IMG/M
3300028792\|Ga0307504_10048503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1203	Open in IMG/M
3300029701\|Ga0222748_1022134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	936	Open in IMG/M
3300029943\|Ga0311340_10451660	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300029999\|Ga0311339_10493922	All Organisms → cellular organisms → Bacteria → Proteobacteria	1247	Open in IMG/M
3300030043\|Ga0302306_10240446	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300030580\|Ga0311355_10267434	Not Available	1739	Open in IMG/M
3300030743\|Ga0265461_13954780	Not Available	504	Open in IMG/M
3300031057\|Ga0170834_104325402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2058	Open in IMG/M
3300031057\|Ga0170834_104968289	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300031128\|Ga0170823_10178011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300031231\|Ga0170824_118642078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2082	Open in IMG/M
3300031236\|Ga0302324_101216965	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300031507\|Ga0307509_10227438	All Organisms → cellular organisms → Bacteria → Proteobacteria	1672	Open in IMG/M
3300031708\|Ga0310686_101919034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1333	Open in IMG/M
3300031708\|Ga0310686_113944682	All Organisms → cellular organisms → Bacteria	8672	Open in IMG/M
3300031708\|Ga0310686_117907062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1020	Open in IMG/M
3300031753\|Ga0307477_10000766	All Organisms → cellular organisms → Bacteria → Proteobacteria	31633	Open in IMG/M
3300031754\|Ga0307475_10681049	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300031795\|Ga0318557_10376891	Not Available	652	Open in IMG/M
3300031823\|Ga0307478_11263326	Not Available	614	Open in IMG/M
3300032074\|Ga0308173_10498083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1090	Open in IMG/M
3300032144\|Ga0315910_10064381	All Organisms → cellular organisms → Bacteria	2667	Open in IMG/M
3300032805\|Ga0335078_12605143	Not Available	518	Open in IMG/M
3300032955\|Ga0335076_10467985	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300033004\|Ga0335084_10042547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4673	Open in IMG/M
3300033004\|Ga0335084_10302315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S190	1654	Open in IMG/M
3300033134\|Ga0335073_11859657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300033289\|Ga0310914_11596449	Not Available	556	Open in IMG/M
3300034090\|Ga0326723_0317168	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300034163\|Ga0370515_0199919	Not Available	852	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.14%
Host-Associated	Host-Associated	11.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.97%
Plants	Host-Associated → Plants	11.86%
Aquatic	Environmental → Aquatic	10.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.03%
Freshwater	Environmental → Aquatic → Freshwater	6.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.78%
Peat	Environmental → Terrestrial → Peat	5.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.24%
Sediment	Environmental → Aquatic → Sediment	2.54%
Marine	Environmental → Aquatic → Marine	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.32%
Loam	Environmental → Terrestrial → Soil → Loam	9.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.54%
Sediment	Environmental → Aquatic → Marine → Sediment	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.85%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.54%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.85%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908006	Soil microbial communities from sample at FACE Site Metagenome WIR_Oz2	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022413	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_21	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076310

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIROz_07056990	2124908006	Soil	MKAIKTYPTRVEADLAKIALDAAGVPSVVVGVGVGMEGGAAGVQLLVPDECVEAALT
INPhiseqgaiiFebDRAFT_1058027923	3300000364	Soil	MKALKTYPTTVEADLARMALEAAHVPSIVVGTGVSMEGGSAGVQLLVPDEYVEAALQVLGHA*
Ga0062385_100436602	3300004080	Bog Forest Soil	MKTVKTYSTKVDADLAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEAALGILERS*
Ga0062384_1008143621	3300004082	Bog Forest Soil	AEVAKIALAAADVPSIVVGVGTELEGGSAGVQLLVPDECVEVALGILERS*
Ga0062387_1009865511	3300004091	Bog Forest Soil	MKTVKAYSTKVDADLAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEAALGILERS*
Ga0062389_1009977731	3300004092	Bog Forest Soil	MKAVKTYSSKVDADVAKIALAAADVPSIVVGVGTELEGGSAGVQLLVPDECVEAALSVLERS*
Ga0062389_1019195041	3300004092	Bog Forest Soil	VDADVAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEAALSILERS*
Ga0062388_1009743542	3300004635	Bog Forest Soil	MKTIKTYSTRVEADVARIALDGAGIPSVVVGVGASMEGGTGGVQLLVEEERVAA
Ga0066690_104930211	3300005177	Soil	MKIIKSYPTTVEADLARLELEAAGIPSTVVGISAGMEGGVAGVQLLVQDDQVVAALTLLKDA*
Ga0070666_104508521	3300005335	Switchgrass Rhizosphere	MKAIKTYPTRVEADLARIALEAAGVPSTVVGIGVSMEGGASGVQLL
Ga0070667_1004357241	3300005367	Switchgrass Rhizosphere	MKTIKTYPTSVEAELARIALNAADIPAVVVGISVGMEGGGAGVQ
Ga0070709_104442521	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKSIKSYATTVEADIARMKLEAAGVPSVVVGVGVGMEGGAAGVQLLVPVDCMEEALAVLGDT*
Ga0070714_1017543642	3300005435	Agricultural Soil	MKSIKSYATTVEADIARMKLEAAGVPSVVVGVGVGMEGGAAGVQLLVPVDCIEEALAVLGDT*
Ga0070695_1011307832	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKTIKTYPTRVEADLARIALEAAGVPSTVVGIGVSMEGGAAGVQLLVPDD
Ga0070665_1008681551	3300005548	Switchgrass Rhizosphere	MKAIKTYSTTVEADLARLELDAADVPAVVVGTGITMEGGMGGVQLLVPDELVDAA
Ga0066670_100204291	3300005560	Soil	MKPIKTYSTTVEADLARIALAATGIPSTVVGISAGMEGGVAGVQLLVPDDRVEGALIVLKDA*
Ga0068860_1004221911	3300005843	Switchgrass Rhizosphere	MKAIKRYPNTVEADIARITLDAADIPAVVVGTGVTMEGGLAGVQL
Ga0066651_101484332	3300006031	Soil	MKPTKTYSTTVEADLARIALAAAGIPSTVVGISAGMEGGVAGVQLLVPDDRVEGALIVLKDA*
Ga0075028_1004138642	3300006050	Watersheds	MKAIKTYSTRVEADLAKIALDAAAVPSIVVGVSVGMEGGAAGVQLLVPDEYAEVALTVLEDA*
Ga0075029_1000687593	3300006052	Watersheds	MKAIKTYSTRVDADLARIALDAAGIPSVVVGVGVGMVGGTGGVQLLVEDDRVDQALKELGER*
Ga0075029_1013600011	3300006052	Watersheds	VKTVKTYSTSVDAEVAKIALAAAGVPADVVGLGADLEGGTGGVQLRVPDECVEAALKVLERS*
Ga0070765_1001827662	3300006176	Soil	MQTIKTYSTRVDADLAKIALAAAGVPSVVVGVGAELEGGTAGVQLLVPDECVEAAWKVLERS*
Ga0066665_113021561	3300006796	Soil	AMKIIKSYPTTVEADLARLELEAAGIPSTVVGISAGMEGGVAGVQLLVQDDQVVAALTLLKDA*
Ga0075428_1001594692	3300006844	Populus Rhizosphere	MKPIKTYSTRLDADLAKIALDAASVPSVIVGIGVSMEGGAGGVQLLVPDEYIEAALKILEQA*
Ga0079217_113704013	3300006876	Agricultural Soil	YPTRVEADLARIKLDGAGVPSIVVGIGVGMEGGMSGVQLLVPDDLVKKALRVLVDD*
Ga0079216_108861492	3300006918	Agricultural Soil	MKPVRTYPTRVEADLARIKLDGAGVPSIVVGIGVGMEGGMSGVQLLVP
Ga0079218_106938381	3300007004	Agricultural Soil	MTTVGTYSSRLEADLAKLALDGAGIPSVIIGIGVGMEGGAAGVQLLVPSERRY
Ga0099827_117360032	3300009090	Vadose Zone Soil	MKTIKTYPTRVEADLARIALDAAGVPSVAVGIGVGMEGGAAGVQLRVADDRVELALQVLGDA*
Ga0075418_105762593	3300009100	Populus Rhizosphere	MQQPFTGNIMKPIKTYSTRLDADLAKIALDAASVPSVIVGIGVSMEGGAGGVQLLVPDEYIEAALKILEQA*
Ga0126307_115809452	3300009789	Serpentine Soil	MKAIKTYSTTVEADLARIALEAAGIPSHVAGIAAGMEGGLAGVQLLVADNHVKAALDVLGDT*
Ga0126308_103226403	3300010040	Serpentine Soil	MKAIKTYSTTVEADLARIALEAVGIPSHVAGIAAGMEGGLAGVQLLVADNQVKAALGVLG
Ga0126306_112203971	3300010166	Serpentine Soil	MKAIKTYSTTVEADLARIALEAASIPSHVAGIAAGMEGGVAGVQLLVADNQVKAALDVLGDT*
Ga0134125_101165642	3300010371	Terrestrial Soil	MQLEADLARIALEGAGISAIVVGVGTGMQGGMEGVQLLVPDDQIGASLNVLEDLERIE*
Ga0126381_1040728121	3300010376	Tropical Forest Soil	MRAVKTYSTRLDADVGRIALEAAGIPSVVVGTGVDLEGGASGVQLLVPDEFVDAALKALEGL*
Ga0126383_126422931	3300010398	Tropical Forest Soil	MKTVKTYSTRVDADLARIALDAIGVPSVVVGVEAAFQGGTGGMQLLVPDEYVEAARKA
Ga0137363_111579382	3300012202	Vadose Zone Soil	MKTIKTYSTSVEADLGRLALEAAGIPSTVVGISAGMEGGVAGVQLLVPDDRVE
Ga0137399_117642971	3300012203	Vadose Zone Soil	MPTPYAEPPLKTIKTYSTSVEADLARLALEAAGIPSTVVGISAGMEGGVAGVQLLVPDDR
Ga0134031_11335111	3300012388	Grasslands Soil	MKIIKSYPTTVEADLARLELEAAGIPSAVVGISAGMEGGVAGVQLLVQDDQVEAALT
Ga0137416_101249651	3300012927	Vadose Zone Soil	MPTPYAEPPLKTIKTYSTSVEADLARLALEAAGIPSTVVGISAGMEGGVAGVQLLVPD
Ga0164303_104604143	3300012957	Soil	MKTIKTYPTSVEAELARIALNAADIPAVVVGISVGMEGGGAGVQLLVPDGRVDARR
Ga0134087_106561411	3300012977	Grasslands Soil	MKPIKTYSTTVEADLARIALAAAGIPSTVVGISAGMEGGVAGVQLLVPDDRVE
Ga0163162_113019102	3300013306	Switchgrass Rhizosphere	MKAIKTYPTRVEADLARIALEAAGVPSTVVGIGVSMEGGASGVQLLVPDDQI
Ga0157375_107000641	3300013308	Miscanthus Rhizosphere	MKTIKTYPTSVEAELARIALNAADIPAVVVGISVGMEGGGAGVQL
Ga0137403_103448742	3300015264	Vadose Zone Soil	MKTIKTYSTRVEADLPRIALDAACVASVVVGVGAGMEGGTGGVKLLVEDDHFERALKVLGDA*
Ga0132258_109841963	3300015371	Arabidopsis Rhizosphere	MKAIKTYSTRVEADLAKIALDGAGLPSVVVGIGAAMEGGAGGVQLLVP
Ga0132256_1010921341	3300015372	Arabidopsis Rhizosphere	MKAIKTYPTRVEADLARIALEAAGVPSTVVGIGVSMEGGASGVQLLVPDDQIEAALRGLEDA*
Ga0187809_102642781	3300017937	Freshwater Sediment	MKTIKTYPTNVEADLARIALDSAGIPAVVVGVGFGMEGGGAGVQLLVPDDRV
Ga0187785_100456071	3300017947	Tropical Peatland	MKAIKTYSTRLDADLAKIALDAAGVPSIVVGVGAAMEGGAAGVQLLVP
Ga0187785_102734111	3300017947	Tropical Peatland	GVPDADLAKIALDAAGVPSLVVGTGVEFEGGANGVQLLVPDEWVAAATAALERPGAR
Ga0187778_102823292	3300017961	Tropical Peatland	VKTVKTYSTRVEADLARIALDAARVPSVIVGIEAAFEGAAGGVQLLVPDEYVEAARKVLERS
Ga0187766_113084421	3300018058	Tropical Peatland	VKTVKTYSTRVEADLARIALDAARVPSVIVGIEAAFEGAAGGVQLLVPDEYVEAAHKVLERS
Ga0187769_101200141	3300018086	Tropical Peatland	VEAIRSYSTTVEADLAKIALDAAGVPSVVVGVGVPMEGGPAGVQLLVPKECVEAALMVLEPSSRVGRTDTST
Ga0190265_109724732	3300018422	Soil	VTPVKTFSTRVEADLARIKPDAAGVPSVVVGVGVDMRGGMGGVQLLVSDEHIDEALLILADD
Ga0190271_135852851	3300018481	Soil	VKPVKTYATRVDADLARIKLDAAGVPSVVVGVAVGMHGGIGGVQLLVSDELIDEALLILADD
Ga0210403_108822881	3300020580	Soil	MQTIKTYSTRVDADLAKIALAAAGVPSVVVGVGAELEGGTAGVQLLVPDEC
Ga0210399_108152702	3300020581	Soil	MKAIKTYPTSVEADLAKIALDAAAIPSVVVGVSLGMEGGGAGVQLLVPDDRVEAALTLLGDS
Ga0210395_100641414	3300020582	Soil	MKTIKTYPTSVEADLARIALDAVGIPSVVVGISLGMEGGGAGVQLLVPDDRVEAALSVLGNS
Ga0210406_104371291	3300021168	Soil	VMKTVKTYSTRVDAEVAKITLAGAGVAAVVVGIGTDLEGGSSGVQLLVEDENVEAALRVLEHS
Ga0210406_107986481	3300021168	Soil	MQTIKTYSTRVDADLAKIALAAAGVPSVVVGVGAELEGGTAGVQLLVPDECVEAAWKVLERS
Ga0210385_102696083	3300021402	Soil	MKAVKTYWTKVDADVAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEAALRILERS
Ga0210385_114756191	3300021402	Soil	MMRTIKTYPTSLEADLARIELDAAGIPAVVVGIGIGMEGGEAGVQLLVPDEHVNAATAVL
Ga0210397_112846792	3300021403	Soil	MAEYLSMKTIKTYPTSVEADLARIALNAVGISLGMEGGGAGVQLLVPDDRVEAALSVLGN
Ga0210387_102171411	3300021405	Soil	PFKTIKTYPMRCEADPARVALEAAGVPVLVVGIGVGMEGGASGVQLLVPDERIAAAPMVLADG
Ga0210386_101376514	3300021406	Soil	MKTIKTYPTSVEADLARIALDAVGIPSVVVGISLGMEGGGAGVQLLVPDD
Ga0210386_104375441	3300021406	Soil	KVDADVAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEAALSILERS
Ga0210383_101025073	3300021407	Soil	VKTIKTYSTRIEADVARIALDAAGVPSVVVGVGVGMEGGAAGVQLLVEDDRVEA
Ga0210383_105409972	3300021407	Soil	MKAVKIYSTRVDADLAKIALDAAGVPSVVVGVGAELEGGAAGVQLLVPDECVEAALMVLERS
Ga0210390_103701611	3300021474	Soil	MKTIKTYSTRVEADLARITLDAAGVPSVVVGVGAGMEGGTGGVQLLVEDDR
Ga0210390_107768773	3300021474	Soil	KTIKTYPTSVEADLARIALDAVGIPSVVVGISLGMEGGGAGVQLLVPDDRVEAALSVLGN
Ga0210390_114920561	3300021474	Soil	STKVDADVAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEAALRILERS
Ga0210398_100544474	3300021477	Soil	LQLALIFISGSAGDAIIKAVKTYSTKVDADVAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEAALRILERS
Ga0224508_1000654311	3300022413	Sediment	LVTIKTYPTPFEAASAKIALDAAEIPSVVVGVGVSMEGGMAGVQLQVPPDQVDAALEVLKDL
Ga0207699_104020742	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKSIKSYATTVEADIARMKLEAAGVPSVVVGVGVGMEGGAAGVQLLVPVDCMEEALAVLGDT
Ga0207700_100152965	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKSIKSYATTVEADIARMKLEAAGVPSVVVGVGVGMEGGAAGVQLLVPVDCIEEALAVLGDT
Ga0207686_104303743	3300025934	Miscanthus Rhizosphere	MKTIKTYPTSVEAELARIALNAADIPAVVVGISVGMEGGGAGVQLL
Ga0207676_110643781	3300026095	Switchgrass Rhizosphere	EADLARIALEAAGVSAFVVGVGVVMEGGAAGVQLQVPDECFEAALRVLKDA
Ga0207698_112521072	3300026142	Corn Rhizosphere	MKTIKTYPTSVEAELARIALNAADIPAVVVGISVGMEGGGAGVQLLVPDGRVEEAL
Ga0209055_11861391	3300026309	Soil	MKIIKSYPTTVEADLARLELEAAGIPSTVVGISAGMEGGVAGVQLLVQDDQVVAALTLLKDA
Ga0209808_13202582	3300026523	Soil	MKIIKSYPTTVEADLARLELEAAGIPSAVVGISAGMEGGVAGVQLLVQDDQVEA
Ga0208985_10139062	3300027528	Forest Soil	VAKIALAAAGVPAVVVGMGTDLEGGTSGVQLLVADEDIEAALGVLEHS
Ga0209420_11846891	3300027648	Forest Soil	VKTYSTKIDADVAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEAALRILERS
Ga0209773_102334052	3300027829	Bog Forest Soil	MKTIKTYSTRVEGDLARITLDAAGVPSVVVGVAAGMEGGAGGVQLLVQ
Ga0209486_107687652	3300027886	Agricultural Soil	MTTVGTYSSRLEADLAKLALDGAGIPSVIIGIGVGMEGGAAGVQLLVP
Ga0209624_101343964	3300027895	Forest Soil	TRLDADVAKIALAAADIPAVVVGVGSEFEGGSSGVQLLVPEDSVEAALKVLAGS
Ga0209006_101303211	3300027908	Forest Soil	MKPVKTYSTKIDADVAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEAALRI
Ga0209006_102943391	3300027908	Forest Soil	MKTVKTYSTGVDAEVAKITLAGAGVAAVVVGIGTDLEGGSSGVQLLVEDENVEAALRVLEHS
Ga0302225_103148152	3300028780	Palsa	MKTIKTYPTSVEADLARITLEVAGIPAVVVGISLGMEGGGDGVQLLVSDDRVEAALA
Ga0307504_100076491	3300028792	Soil	MKTIKTYSTRVEADLARIALDAAAIPSAVVGIGVGMEGGVAGVQLLVPDDRVEAALTVLGDA
Ga0307504_100485032	3300028792	Soil	MKTIKTYPTRVEADLARIALDAAGVPSVVFGIGVGMEGGAAGVQLCVEDDRVELALQVLGDA
Ga0222748_10221341	3300029701	Soil	IEADVARIALDAAGVPSVVVGVGVGMEGGAAGVQLLVEDDRVEAALKVLGDA
Ga0311340_104516601	3300029943	Palsa	MKTIKTYPTSVEADLARITLEVAGIPAVVVGISLGMEGGGDGVQLLVSDDRVEAALAVLGDA
Ga0311339_104939221	3300029999	Palsa	KTYPTSVEADLARITLEVAGIPAVVVGISLGMEGGGDGVQLLVSDDRVEAALAVLGDA
Ga0302306_102404462	3300030043	Palsa	MKSIKSYPTNVEADLARIALDAAGISAVVVGISFGMEGGGAGVQLLVPDDCVEAALSVLGDS
Ga0311355_102674341	3300030580	Palsa	VRGPVIMKVIKSYSTSVDAEVARIALDAAGVPSTVVGIDAAMEGGTAGVELLVPDEWIE
Ga0265461_139547801	3300030743	Soil	FILGRAGDAIMKAVKTYSTKVDADVAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEAALSILERS
Ga0170834_1043254023	3300031057	Forest Soil	MKTVKTYSTRVDAEVAKITLAGAGVAAVVVGIGADLEGGTSGVQLLVEDEYVEAALKVLEHS
Ga0170834_1049682892	3300031057	Forest Soil	MKTVKTYSTRVDADLAKIALAAAGVPSVVVGIGAELEGGTAGVQLLVPDECVEAAWKVLELS
Ga0170823_101780112	3300031128	Forest Soil	KTYSTKVDADLAKITLAAAGVPSVVVGVGAELEGGTAGVQLLVPDECVEAAWKVLEQS
Ga0170824_1186420784	3300031231	Forest Soil	MKTVKTYSTRVDAEVAKITLAGAGVAAVVVGIGADLEGGTSGVQLLVEDENVEAALKVLEHS
Ga0302324_1012169652	3300031236	Palsa	MKTVKTYSTRIDAEVAKIALAAADVPSEVVGIGTELEGGAAGVQLLVPDDCVAAALTILERS
Ga0307509_102274384	3300031507	Ectomycorrhiza	TYPTTVEADLARLELDAADVPSVVVGTGVTMEGGLAGVQLLVPDDQVEAALEVLGDG
Ga0310686_1019190341	3300031708	Soil	MSTLSMKTIKTYPTSVEADLARIALDAVGIPSVVVGISLGMEGGGAGVQLLVPDDRVEAALSVLGNT
Ga0310686_1139446823	3300031708	Soil	MKAVKTYSTKVDADVAKIALAAADVPSVVVGLGTELEGGSAGVQLLVPDECVEAALSILERS
Ga0310686_1179070621	3300031708	Soil	MQTIKTYSTRIEADVARIALDAAGVSAVVVGVGVGMEGGTAGGQLLVE
Ga0307477_1000076614	3300031753	Hardwood Forest Soil	MKAVKTYSTRVDADVAKIALDAAGVPSVVVGIGAEVEGGAAGVQLLVPDECVEAALMALERG
Ga0307475_106810491	3300031754	Hardwood Forest Soil	MKTIKTYSTRVEADLARIALDAVGVRSVVVGVGVGMEGGTGGVQLLVEDDRVERA
Ga0318557_103768911	3300031795	Soil	MKAVKFYATRIDADLARIRLEAAGVPSTVVGIDIALEGGAFG
Ga0307478_112633261	3300031823	Hardwood Forest Soil	LGRAGDAIMRAVKTYSTRVDADVAKIALAAAAVPSVVVGVGTELEGGSAGVQLLVPDECVEAALRILERS
Ga0308173_104980832	3300032074	Soil	MGQAARVSWHTHLMKAIKRYPTTVEADIARITLDAADIPAVVVGTGVTMEGGLAGVQLLVPDEHV
Ga0315910_100643813	3300032144	Soil	MTPLKTYPTQVEADLARIKLAAAGVPSLVVGIDVGMKGGMGGVQLLVSEDLIDAALQILADD
Ga0335078_126051432	3300032805	Soil	MKTVKTYPTSVEADLARIALEAAGVPAVVVGVGLGMEGGAAGVQLLVP
Ga0335076_104679853	3300032955	Soil	MGQLSMKIIKTYPTRVEADLARIELEAADVPSTVAGVGVGMEGGTAGVQLLVDDDLVERALEVLGDR
Ga0335084_100425475	3300033004	Soil	MKAIKTYPTRVEADLAKIALDAAGVPSVVVGVGVGMEGGVAGVQLLVPDD
Ga0335084_103023151	3300033004	Soil	MKAIKTYSARLEADLAKIALDAAGVPSVVVGIGAAMEGGAAGVQLLVPDE
Ga0335073_118596572	3300033134	Soil	MKAIRRYPTRLEAELARIRLEAADIPAVVVGIGTGMEGGAAGVQLLV
Ga0310914_115964491	3300033289	Soil	MKAVKSYATRMDADLAKIRLEAAGVPSTVVGIDIALEGGAF
Ga0326723_0317168_532_699	3300034090	Peat Soil	MKAIKTYPTRVEADLAKIALDAAGVPSVVVGIDVGMEGGAAGVQLLVADDQVEAAL
Ga0370515_0199919_2_163	3300034163	Untreated Peat Soil	MKAIKTYSTKVDADVAKIALAAADVPSVVVGVGTELEGGSAGVQLLVPDECVEA

Hidden Markov Model


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