Metagenome Family F076290

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076290
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	122 residues
Representative Sequence	RHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPK
Number of Associated Samples	99
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.02 %
% of genes near scaffold ends (potentially truncated)	40.68 %
% of genes from short scaffolds (< 2000 bps)	74.58 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.644 % of family members)
Environment Ontology (ENVO)	Unclassified (34.746 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.542 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 11.49% β-sheet: 34.46% Coil/Unstructured: 54.05%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF08212	Lipocalin_2	25.42
PF03446	NAD_binding_2	22.88
PF14833	NAD_binding_11	11.02
PF03313	SDH_alpha	8.47
PF00496	SBP_bac_5	4.24
PF09864	MliC	4.24
PF13619	KTSC	3.39
PF06315	AceK_kinase	1.69
PF03315	SDH_beta	1.69
PF00248	Aldo_ket_red	1.69
PF02737	3HCDH_N	1.69
PF08238	Sel1	0.85
PF10543	ORF6N	0.85
PF05222	AlaDh_PNT_N	0.85
PF01408	GFO_IDH_MocA	0.85
PF00384	Molybdopterin	0.85
PF00326	Peptidase_S9	0.85
PF03807	F420_oxidored	0.85
PF04166	PdxA	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG3040	Bacterial lipocalin Blc	Cell wall/membrane/envelope biogenesis [M]	25.42
COG1760	L-serine deaminase	Amino acid transport and metabolism [E]	10.17
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.69
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	1.69
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.69
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.69
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.69
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	1.69
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	1.69
COG4579	Isocitrate dehydrogenase kinase/phosphatase	Signal transduction mechanisms [T]	1.69
COG1995	4-hydroxy-L-threonine phosphate dehydrogenase PdxA	Coenzyme transport and metabolism [H]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	90.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	72.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	55.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.85 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	55.93 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.54 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	55.93 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.85 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.85 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	55.93 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.85 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	55.93 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.85 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.85 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908036\|A5_v_NODE_14748_len_1156_cov_6_350346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1206	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig15647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	602	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig34599	All Organisms → cellular organisms → Bacteria → Proteobacteria	2161	Open in IMG/M
3300001593\|JGI12635J15846_10078706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2418	Open in IMG/M
3300001593\|JGI12635J15846_10402369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	826	Open in IMG/M
3300002245\|JGIcombinedJ26739_101451392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	580	Open in IMG/M
3300002245\|JGIcombinedJ26739_101616897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	545	Open in IMG/M
3300005167\|Ga0066672_10452176	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300005171\|Ga0066677_10077449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1721	Open in IMG/M
3300005175\|Ga0066673_10104984	All Organisms → cellular organisms → Bacteria → Proteobacteria	1522	Open in IMG/M
3300005177\|Ga0066690_10084254	All Organisms → cellular organisms → Bacteria → Proteobacteria	2015	Open in IMG/M
3300005178\|Ga0066688_10708974	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300005179\|Ga0066684_10409557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	911	Open in IMG/M
3300005180\|Ga0066685_10076057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2208	Open in IMG/M
3300005434\|Ga0070709_11062126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	646	Open in IMG/M
3300005437\|Ga0070710_10186723	All Organisms → cellular organisms → Bacteria → Proteobacteria	1301	Open in IMG/M
3300005445\|Ga0070708_100504714	All Organisms → cellular organisms → Bacteria → Proteobacteria	1141	Open in IMG/M
3300005445\|Ga0070708_101172239	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300005451\|Ga0066681_10488803	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300005471\|Ga0070698_100155148	All Organisms → cellular organisms → Bacteria → Proteobacteria	2235	Open in IMG/M
3300005566\|Ga0066693_10039424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1535	Open in IMG/M
3300005575\|Ga0066702_10471642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	767	Open in IMG/M
3300005952\|Ga0080026_10002247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4621	Open in IMG/M
3300005952\|Ga0080026_10163119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	649	Open in IMG/M
3300005952\|Ga0080026_10180716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	620	Open in IMG/M
3300005993\|Ga0080027_10117742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1005	Open in IMG/M
3300005994\|Ga0066789_10039302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2090	Open in IMG/M
3300005994\|Ga0066789_10479992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	519	Open in IMG/M
3300005995\|Ga0066790_10020467	All Organisms → cellular organisms → Bacteria	2891	Open in IMG/M
3300005995\|Ga0066790_10164907	All Organisms → cellular organisms → Bacteria → Proteobacteria	948	Open in IMG/M
3300006031\|Ga0066651_10321251	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300006176\|Ga0070765_101341871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	674	Open in IMG/M
3300006642\|Ga0075521_10134676	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300006794\|Ga0066658_10876922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	514	Open in IMG/M
3300006797\|Ga0066659_10209735	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300006800\|Ga0066660_10068148	All Organisms → cellular organisms → Bacteria	2402	Open in IMG/M
3300009012\|Ga0066710_104363618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	528	Open in IMG/M
3300009029\|Ga0066793_10014339	All Organisms → cellular organisms → Bacteria → Proteobacteria	4235	Open in IMG/M
3300011269\|Ga0137392_10664680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	863	Open in IMG/M
3300011270\|Ga0137391_10417585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1145	Open in IMG/M
3300011996\|Ga0120156_1010467	All Organisms → cellular organisms → Bacteria → Proteobacteria	1923	Open in IMG/M
3300012096\|Ga0137389_11351927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	607	Open in IMG/M
3300012189\|Ga0137388_10676339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	959	Open in IMG/M
3300012199\|Ga0137383_10373837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1044	Open in IMG/M
3300012200\|Ga0137382_10313550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1096	Open in IMG/M
3300012200\|Ga0137382_10422796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	941	Open in IMG/M
3300012205\|Ga0137362_10724241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	854	Open in IMG/M
3300012208\|Ga0137376_10023018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4815	Open in IMG/M
3300012208\|Ga0137376_10319940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1346	Open in IMG/M
3300012208\|Ga0137376_10745482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	844	Open in IMG/M
3300012209\|Ga0137379_10421528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1244	Open in IMG/M
3300012209\|Ga0137379_10988786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	746	Open in IMG/M
3300012210\|Ga0137378_10039368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4223	Open in IMG/M
3300012211\|Ga0137377_10089689	All Organisms → cellular organisms → Bacteria → Proteobacteria	2904	Open in IMG/M
3300012285\|Ga0137370_10045912	All Organisms → cellular organisms → Bacteria → Proteobacteria	2329	Open in IMG/M
3300012357\|Ga0137384_10358970	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300012362\|Ga0137361_10667996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	950	Open in IMG/M
3300012363\|Ga0137390_10016867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6661	Open in IMG/M
3300012683\|Ga0137398_10641910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	736	Open in IMG/M
3300012924\|Ga0137413_11664523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	523	Open in IMG/M
3300015080\|Ga0167639_1003252	All Organisms → cellular organisms → Bacteria	2440	Open in IMG/M
3300015085\|Ga0167632_1035355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	651	Open in IMG/M
3300015087\|Ga0167637_1000087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	9116	Open in IMG/M
3300015087\|Ga0167637_1001249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3805	Open in IMG/M
3300015089\|Ga0167643_1041661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	707	Open in IMG/M
3300015090\|Ga0167634_1000126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	6896	Open in IMG/M
3300015162\|Ga0167653_1004554	All Organisms → cellular organisms → Bacteria → Proteobacteria	3039	Open in IMG/M
3300015193\|Ga0167668_1096733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	551	Open in IMG/M
3300015197\|Ga0167638_1001708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4936	Open in IMG/M
3300015197\|Ga0167638_1015088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1826	Open in IMG/M
3300015371\|Ga0132258_11217502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1903	Open in IMG/M
3300015372\|Ga0132256_100081920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3091	Open in IMG/M
3300015373\|Ga0132257_100088244	All Organisms → cellular organisms → Bacteria	3546	Open in IMG/M
3300018027\|Ga0184605_10127335	All Organisms → cellular organisms → Bacteria → Proteobacteria	1137	Open in IMG/M
3300018071\|Ga0184618_10140550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	980	Open in IMG/M
3300018482\|Ga0066669_10393201	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300019879\|Ga0193723_1149837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	626	Open in IMG/M
3300019887\|Ga0193729_1169704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	772	Open in IMG/M
3300019887\|Ga0193729_1190181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	709	Open in IMG/M
3300019888\|Ga0193751_1003826	All Organisms → cellular organisms → Bacteria	8735	Open in IMG/M
3300019888\|Ga0193751_1055456	All Organisms → cellular organisms → Bacteria → Proteobacteria	1684	Open in IMG/M
3300019888\|Ga0193751_1119704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	984	Open in IMG/M
3300020006\|Ga0193735_1019317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2116	Open in IMG/M
3300021080\|Ga0210382_10101699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1197	Open in IMG/M
3300021086\|Ga0179596_10673410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	524	Open in IMG/M
3300021344\|Ga0193719_10284381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	696	Open in IMG/M
3300021413\|Ga0193750_1051729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	859	Open in IMG/M
3300021432\|Ga0210384_11210254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	660	Open in IMG/M
3300021478\|Ga0210402_10020259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5701	Open in IMG/M
3300023056\|Ga0233357_1012905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	935	Open in IMG/M
3300025878\|Ga0209584_10148154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	883	Open in IMG/M
3300025898\|Ga0207692_10256321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1050	Open in IMG/M
3300026217\|Ga0209871_1116898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	522	Open in IMG/M
3300026291\|Ga0209890_10089277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1081	Open in IMG/M
3300026294\|Ga0209839_10000810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	15953	Open in IMG/M
3300026294\|Ga0209839_10067464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1262	Open in IMG/M
3300026294\|Ga0209839_10244063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	565	Open in IMG/M
3300026315\|Ga0209686_1156585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	685	Open in IMG/M
3300026318\|Ga0209471_1067833	All Organisms → cellular organisms → Bacteria → Proteobacteria	1603	Open in IMG/M
3300026325\|Ga0209152_10220146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	711	Open in IMG/M
3300026331\|Ga0209267_1062635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1645	Open in IMG/M
3300026335\|Ga0209804_1069691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1670	Open in IMG/M
3300026550\|Ga0209474_10438533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	667	Open in IMG/M
3300027535\|Ga0209734_1047460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	811	Open in IMG/M
3300027562\|Ga0209735_1028475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1165	Open in IMG/M
3300027565\|Ga0209219_1000403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6452	Open in IMG/M
3300027587\|Ga0209220_1134109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	644	Open in IMG/M
3300027591\|Ga0209733_1113942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	675	Open in IMG/M
3300027605\|Ga0209329_1041208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	974	Open in IMG/M
3300027635\|Ga0209625_1049224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	940	Open in IMG/M
3300027645\|Ga0209117_1015384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2526	Open in IMG/M
3300027651\|Ga0209217_1122243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	733	Open in IMG/M
3300027727\|Ga0209328_10018398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2129	Open in IMG/M
3300027748\|Ga0209689_1434587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	503	Open in IMG/M
3300028047\|Ga0209526_10378718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	943	Open in IMG/M
3300031057\|Ga0170834_105636927	All Organisms → cellular organisms → Bacteria → Proteobacteria	851	Open in IMG/M
3300031231\|Ga0170824_103035143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	543	Open in IMG/M
3300032180\|Ga0307471_101983233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.46%
Host-Associated	Host-Associated	2.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.92%
Aquatic	Environmental → Aquatic	2.54%
Plants	Host-Associated → Plants	2.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.92%
Sediment	Environmental → Aquatic → Sediment	1.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.69%
Freshwater	Environmental → Aquatic → Freshwater	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.86%
Loam	Environmental → Terrestrial → Soil → Loam	21.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.56%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.08%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.71%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	8.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	6.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.08%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.69%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.69%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908036	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015087	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6A, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015090	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5A, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_v_00056520	2124908036	Soil	MKPQSQDRHAKIAARHNVARAKPRRLDFAWFVAALALISTGCEHKPTKEETEATKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGTLTTLESCKQYAVPKP
A5_c1_01143930	2124908044	Soil	MKPQSQHRHAEVDVRHFVARKKPMRLDFVWLAAVLALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFGSGEARMLHAASEKITLYQIPSGGGTRYSNGNVELQGKGMDWTLTELGASTTLESCKQYAAPKP
A5_c1_01043010	2124908044	Soil	MKPQSQDRHAKIAARHNVARAKPRRLDFAWFVAALALISTGCEHKPTKEETEATKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVE
JGI12635J15846_100787061	3300001593	Forest Soil	ARHNAARAKTRRRDFACVVAALALISTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
JGI12635J15846_104023692	3300001593	Forest Soil	VRHFVARKKTMRLDFVWFAAALALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFDSGEARMLTAAAEKITLYQISTGATTRYSNGNVELRGKGMDWTLTELGASTTLESCKQYAAPKP*
JGIcombinedJ26739_1014513921	3300002245	Forest Soil	CEHKPSKEETEATKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGTLTTLESCKQYAAPKP*
JGIcombinedJ26739_1016168972	3300002245	Forest Soil	LKPQSQDRHAKIVGRHNAARARPGRLDFAWFVAALALISTGCEHKPSKEETEATKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGTLTTLESCKQYAAPKP*
Ga0066672_104521761	3300005167	Soil	MKPQSQDRQAKIVARRNAGRAKPGRLDFAWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0066677_100774491	3300005171	Soil	MKPQLQDRHAKIVARHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0066673_101049842	3300005175	Soil	MKPQLQDRHAKIVARHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0066690_100842542	3300005177	Soil	MKPQSQDRHAKIVARHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0066688_107089742	3300005178	Soil	MKPQSQDRQAKIVARRNAGRAKPGRLDFAWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQY
Ga0066684_104095573	3300005179	Soil	HKPTKEEEQAAKNTFACQLVGERLIVRFESGEARMLTATGEKITLYQIPSTSGGMRYSNGNVELRGKGMDLTLTENGASTPLEGCQQYTPPKP*
Ga0066685_100760571	3300005180	Soil	MRRQLIGCTAITVAVAVVIGCEQIHKPTKEEEQAAKNTFACQLVGERLIVRFESGEARMLTATGEKITLYQIPSTSGGMRYSNGNVELRGKGMDLTLTENGASTPLEGCQQYTPPKP*
Ga0070709_110621262	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRFDFAWFVAALALIGTGCEHKPSKEETEAAKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMEWTLTELGVPTTLESCKQYATPKP*
Ga0070710_101867232	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRFDFAWFAAALALIGTGCEHKPSKEETEAAKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMEWTLTELGVPTTLESCKQYATPKP*
Ga0070708_1005047141	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKPQSEDRHAKIIVRHDAAPAKPKRLDFAWFVAALALISTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTASSEKITLYQIPSSGGTRYSNGNVELRGKGMDWTLTELGVST
Ga0070708_1011722391	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GCEHKPTKEEEQAAKNTFACQLVGERLVIRFDAGEARMLTATGEKITLYQIPSGSGSSMRYSNGNMELRGKGMDLTLIENGASTTLEGCQQYVPPKT*
Ga0066681_104888032	3300005451	Soil	MKPQLQDRHAKIVARHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCK
Ga0070698_1001551482	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKPQSQDRHAKIIVRHDAAPAKPKRLDFAWFVAALALISTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTASSEKITLYQIPSSGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0066693_100394243	3300005566	Soil	MKPQLQDRHAKIVARHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWKLTELGVSTTLESWKQYAAPKP*
Ga0066702_104716421	3300005575	Soil	RFCGRQRPMKPQSQDRQAKIVARRNAGRAKPGRLDFAWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0080026_100022475	3300005952	Permafrost Soil	MRMGFVWLAAALALVVTGCDHKPSKEEEDVAKNTITCQLAGERLVIRFDSGEVRMLTSTAESITLYQIPSGAVMRYSNGNLELRGKGMEWTLTDLGTATTLESCKRYAAPKP*
Ga0080026_101631192	3300005952	Permafrost Soil	MRLAFAWFAAALALISTGCEHKPSKEETEAAKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAPPKP*
Ga0080026_101807162	3300005952	Permafrost Soil	MRPNFAWFTVALALFLAGCEHKPSKEEEEAAKNTISCQLAGDRLVIRFESGEVRMLTATAEAITLYQIPSGAVMRYSNGNLELRGKGMEWTLSDLGVTTTLESCKRYEVPKP*
Ga0080027_101177422	3300005993	Prmafrost Soil	MRPIFAWFAIMLAMVLVACEHKPSKEEEEATKNTITCLLAGERLVIRFDSGEARMLTSTAERITLYQIGSAGGNRYSNGNVELRGKGMDWSLTELGASTTLEACKQYTVPKP*
Ga0066789_100393023	3300005994	Soil	MRPNFAWFTVALALFVAGCEHKPSKEEEDAAKNTITCQLASDRLVIRFESGEVRMLTATAEAITLYQIPSGAVMRYSNGNLELRGKGMEWTLSDLGVTTTLESCKRYEAPKP*
Ga0066789_104799922	3300005994	Soil	AVALALVATGCDHKPTKEEEEAAKNTITCQLAGDRLVIRFDSGEVRLLTATAEKITLYQIPSGAVMRYSNGNMELRGKGLEWTLTDLGASTTLESCKQYAPPKP*
Ga0066790_100204672	3300005995	Soil	MRPNFAWFTVALALFLAGCEHKPSKEEEEAAKNTISCQLAGDRLVIRFESGEVRMLTATAEAITLYQIPSGAVMRYSNGNLELRGKGMEWTLSDLGVTTTLESCKRYEAPKP*
Ga0066790_101649072	3300005995	Soil	MRLEFAWFAVALALVATGCEHKPTKEEEEAARNTITCQLAGDRLVIRFDSGEVRLLTATAEKITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0066651_103212511	3300006031	Soil	MKPQLQDRHAKIVARHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTL
Ga0070765_1013418712	3300006176	Soil	MRLHFAWFVAALALIAAGCEHKPSKEESDATKNTMTCQLAGDRLVIRFEPGEVRMLTATAETITLYQIPAGTVMRYSNGNLELRGKGMDWTLTELGTLTTLESCKQYAAP
Ga0075521_101346762	3300006642	Arctic Peat Soil	MRLQFAWFAVALALVVTGCDHKPTKEEEEAAKNTITCQLAGDRLVIRFDSGEVRLLTATAERITLYQIPSGAVMRYSNGNMELRGKGLEWTLTDLGASTTLESCKQYAAPKP*
Ga0066658_108769221	3300006794	Soil	AWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0066659_102097353	3300006797	Soil	MRRQLIGCTAITVAVAVVVGCEQIHKPTKEEEQAAKNTFACQLVGERLIVRFESGEARMLTATGEKITLYQIPSTSGGMRYSNGNVELRGKGMDLTLTENGASTPLEGCQQYTPPKP*
Ga0066660_100681482	3300006800	Soil	MKPQSQDRQAKIVARRNAGRAKPGRLDFAWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0066710_1043636181	3300009012	Grasslands Soil	MRRQLIGCTAITVAVAVVVGCEQIHKPTKEEEQAAKNTFACQLVGERLVIRFDAGEARMLTAAGEKITLYQIPSGSGSSMRYSNGSMELRGKGMDLT
Ga0066793_100143393	3300009029	Prmafrost Soil	MKPQSQHRHAEVDVRHFVARKKPMRLDFVWLAAVLALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFGSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELQGKGMDWTLTELGASTTLESCRQYAAPKP*
Ga0137392_106646802	3300011269	Vadose Zone Soil	MKPQSQDRHAKIVVRDDAARAKPRRLDFAWFVAALALIGTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137391_104175852	3300011270	Vadose Zone Soil	RHAKIVVRDDAARAKPRRHDFAWFVAALALIGTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSSGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0120156_10104672	3300011996	Permafrost	MRLDFAWFAAALALVATGCEHKPTKEEEEAAKNTITCQLAGERLVIRFDSGEARMLTAAAEKITLYQIPSGVGVRYSNGNVELRGKGMDWTLTELGASSKLESCKQYAVPKP*
Ga0137389_113519272	3300012096	Vadose Zone Soil	MKPQSQDRHAKIVALHDAAPAKPKRLDFAWFVAALALIGTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMEWTLTELGVST
Ga0137388_106763391	3300012189	Vadose Zone Soil	IGTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137383_103738372	3300012199	Vadose Zone Soil	MKPQSQDRHAKIVARHNAARAKPRRLGFAWMVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137382_103135502	3300012200	Vadose Zone Soil	MKPQSQDRHVKIVARHNAVRARPRRLDFTWLVAALALISTVCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137382_104227961	3300012200	Vadose Zone Soil	MKPQSQGRQAKIVARRNAGRAKPRRLDFAWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137362_107242412	3300012205	Vadose Zone Soil	MKPQSQDRHAKIVARHNAARAKPRRLGFAWLVAALALIGTGCEHKPSTEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137376_100230183	3300012208	Vadose Zone Soil	MKPQSQDRHVKIVARHNAVRARPRRLDFTWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTALESCKQYAAPKP*
Ga0137376_103199401	3300012208	Vadose Zone Soil	MKPQSQGRQAKIVARRIAARAKPRRLGFAWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137376_107454822	3300012208	Vadose Zone Soil	MKPQSQHRHAKVDVRHFIARKKPMRLDFVWFVAALALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFGSGEARLLTAAAEKITLYQIPSGGGTRYSNGTVELQGKGMDWTLTELGGMTTLESCQQYAAPKP*
Ga0137379_104215283	3300012209	Vadose Zone Soil	MRRQLIVCTAITVAVAAVAGCEQIHKPTKEEEQAAKNTFACQLVGERLIVRFESGEARMLTATGEKITLYQIPSTSGGMRYSNGNVELRGKGMDLTLTENGASTPLEGCQQYTPPKP*
Ga0137379_109887861	3300012209	Vadose Zone Soil	MRIDPRILLAVVVALALGCEHKPSKEEEQAAKNTFACQLVGERLVIRFDSGEARMLTAAGEKITLYQLPSGSGGPVRYSNGIMELRGKGMDLTLIEN
Ga0137378_100393682	3300012210	Vadose Zone Soil	MHIDFRTALAVVVALALGGCEHKPSKEEEQAAKNTFACQLVGERLVIRFDSGEARMLTAAGEKITLYQLPSGSGGPVRYSNGIMELRGKGMDLTLIENGAATTLEGCQQYTPPKT*
Ga0137377_100896893	3300012211	Vadose Zone Soil	MKPQSQDRHAKIVARHNAARAKPRRLGFAWLVAALALIGTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137370_100459121	3300012285	Vadose Zone Soil	MKPQSQGRQAKIVARHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKSMDWTLTELGVSTTLES
Ga0137384_103589701	3300012357	Vadose Zone Soil	MKPQSQHRHVEVEVRHFVARKKAMRLDFVWCAAALALIVTGCEHKPTKEEEEATKNTISCQLAGERLVIRFGSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELQGKGMDWTLTELGASTMLESCKQYAAPTKP*
Ga0137361_106679962	3300012362	Vadose Zone Soil	MKPQSQGRHAKIVARRNAARAKPRRLGFAWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137390_100168672	3300012363	Vadose Zone Soil	MKPQSQDRHAKIVALHDAAPAKPKRLDFAWFVAALALIGTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137398_106419102	3300012683	Vadose Zone Soil	MKPQSQGRHAKIVAHRNAARAKPRRLDFTWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0137413_116645232	3300012924	Vadose Zone Soil	ISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP*
Ga0167639_10032522	3300015080	Glacier Forefield Soil	MKPQSHHGRARIDARRFPAKEKPMHLEFAWFAVALALVATGCDHKPTKEEEEAAKNTITCQLAGDRLVIRFDSGEVRLLTATAEKITLYQIPSGAVMRYSNGNMELRGKGLEWTLTDLGASTTLESCKQYAPPKP*
Ga0167632_10353552	3300015085	Glacier Forefield Soil	RHIVARAKPRRLDFAWFVAALALISTGCEHKPTKEETEATKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGTLTTLESCKQYAAPKP*
Ga0167637_10000878	3300015087	Glacier Forefield Soil	MKPQSHHGRARIDARRFPAKEKPMRLEFAWFAVALALVATGCEHKPTKEEEEAAKNTITCQLAGDRLVIRFDSGEVRLLTATAEKITLYQIPSGAAMRYSNGNMELRGKGLEWTLSDLGVSTTLESCKQYAPPKP*
Ga0167637_10012494	3300015087	Glacier Forefield Soil	VWLAAALALVVTGCDHKPSKEEEDVAKNTITCQLAGERLVIRFDSGEVRMLTSTAESITLYQIPSGAVMRYSNGNLELRGKGMEWTLTDLGTATTLESCKRYAAPKP*
Ga0167643_10416611	3300015089	Glacier Forefield Soil	MRMGFVCFAAALALIATGCDHKPTKEEEEAAKNTITCQLAGDRLVIRFDSGEVRLLTATAEKITLYQIPSGAVMRYSNGNMELRGKGLEWTLSDLGVSTTLESCKQYAPPKP*
Ga0167634_10001265	3300015090	Glacier Forefield Soil	MKPQSQDRHAKIAARHNVARAKPRRLDFAWFVAALALISTGCEHKPTKEETEATKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGTLTTLESCKQYAVPKP*
Ga0167653_10045543	3300015162	Glacier Forefield Soil	MRRFFAPLAVALALIVTGCEHKPSKEEEEAAKNTITCQLAGERLVIRFDSGEARMLTSTGERITLYQIATGPGTRYSNGNVELRGRGMEWTLIELGASTTLESCKQYAAPKPS*
Ga0167668_10967331	3300015193	Glacier Forefield Soil	VAIGARHFTGEKRMRLDFAWFAAALALISTGCEHKPTKEEEEATKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVAATLESCKQYAVPKP*
Ga0167638_10017082	3300015197	Glacier Forefield Soil	MKPRSQHRHARIGAHRFTAGEKPMRMGFVWLAAALALVVTGCDHKPSKEEEDVAKNTITCQLAGERLVIRFDSGEVRMLTSTAESITLYQIPSGAVMRYSNGNLELRGKGMEWTLTDLGTATTLESCKRYAAPKP*
Ga0167638_10150882	3300015197	Glacier Forefield Soil	MNPKSQHRRARIDARRFAAREKPMRLEFAWFAVALALVAGCDHKPTKEEEEAAKNTITCQLSGDRLVIRFDSGEVRLLTATAEKITLYQIPSGAVMRYSNGNMELRGKGLEWTLTDLGASTTLESCKQYAAPKP*
Ga0132258_112175023	3300015371	Arabidopsis Rhizosphere	MRLLRHRLAAFDARHFAAPEKPMRLDFVCLVATLALLATGCEHKATKEEEEAAKNTITCQLAGERLVIRFDQGEARMLTATSEKITLYQIPSAGGTRYSNGNVELRGKGMEWTLTELGASTNLESCKQYAAPKP*
Ga0132256_1000819202	3300015372	Arabidopsis Rhizosphere	MRLLRHRLAAFDARHFAALEKPMRLDFVCLVATLALLATGCEHKATKEEEEAAKNTITCQLAGERLVIRFDQGEARMLTATSEKITLYQIPSAGGTRYSNGNVELRGKGMEWTLTELGASTNLESCKQYAAPKP*
Ga0132257_1000882444	3300015373	Arabidopsis Rhizosphere	MRLLRHRLAAFDARHFAAPEKPMRLDFVCLVATLALLATGCEHKATKEEEEAAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSAGGTRYSNGNVELRGKGMEWTLTELGASTNLESCKQYAAPKP*
Ga0184605_101273351	3300018027	Groundwater Sediment	MKPQSQQRHVEVDVRHFVARKKAMRIDFVCFAAALSLIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFGSGEARMLTAAAEKITLYQIPSGGGTRYSNGNV
Ga0184618_101405502	3300018071	Groundwater Sediment	MRLDFVCFAAALALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFGSGEARLLTAAAEKITLYQIPSGGGTRYSNGNVELQGKGMDWTLTELGASATLESCKQYAAPKP
Ga0066669_103932012	3300018482	Grasslands Soil	MKPQLQDRHAKIVARHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0193723_11498372	3300019879	Soil	VRHFVARKKPIRLDFVWFAAALALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFGSGEARMLTAAAEKITLYQIPSGGGTRYSNGNVELQGKGMDWTLTELGASTTLESCKQYAAPAKP
Ga0193729_11697042	3300019887	Soil	MKPQSQDRHAKIAARHDAARAKPRRLDFAWFVAALTLISTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0193729_11901812	3300019887	Soil	MRRQLIVCTAITVAVAAVAGCEQIHKPTKEEEQAAKNTFACQLVGERLIVRFESGEARMLTATGEKITLYQIPSTSGGMRYKGMDLTLTENGASTPLEGCQQFTPPKP
Ga0193751_10038263	3300019888	Soil	MRRQLIVCTAITVAVAAVAGCEQIHKPTKEEEQAAKNTFACQLVGERLIVRFESGEARMLTATGEKITLYQIPSTSGGMRYSNGNVELRGKGMDLTLTENGASTPLEGCQQFTPPKP
Ga0193751_10554561	3300019888	Soil	MRFDFAWFVAVLALISTGCEHKPSKEETEAAKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGTMTTLESCKQYAAPKP
Ga0193751_11197042	3300019888	Soil	MRLDFVLFAAALALIVTGCEHKPTKEEEEATKNTISCQLAGERLVIRFGSGEARLLTAAAEKITLYQIPSGGGTRYSNGNVELLGKGMDWTLTELGASTTLESCKQYAVPTKP
Ga0193735_10193172	3300020006	Soil	MKVQSQHRHAKVDVRYFIARKKPMRLDFVCFAAALALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFGSGEARLLTAAAEKITLYQIPSGGGTRYSNGNVELQGKGMDWTLTELGASTTLESCKQYAVPTKP
Ga0210382_101016991	3300021080	Groundwater Sediment	VRQFVARKKAMRLDFVCFAAALALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFGSGEARMLTAAAEKITLYQIPSGGGTRYSNGNVELQGKGMDWTLTELGASATLESCKQYAAPKP
Ga0179596_106734102	3300021086	Vadose Zone Soil	ALIGTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSSGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0193719_102843811	3300021344	Soil	LALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFGSGEARLLTAAAEKITLYQIPSGGGTRYSNGNVELQGKGMDWTLTELGASTTLESCKQYAVPTKP
Ga0193750_10517291	3300021413	Soil	LRKPAAGIVRRSFATFCARQRPMKPQSQGRHAKIVARRNAARAKPRRLGCACLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0210384_112102541	3300021432	Soil	MRLDYAWFVAALALISTGCEHKPSKEETEAAKNTVTCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0210402_100202592	3300021478	Soil	VAIGARHFVAREKRMRLDFAWFAAALALLGTGCEHKPSKEEEEATKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGLDWTLTELGVSTTLEACKQYAVPKP
Ga0233357_10129051	3300023056	Soil	MKLQPQDRHAKIVARHNAVRAKPRRLDFTWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTR
Ga0209584_101481541	3300025878	Arctic Peat Soil	IDACHFAAREKSMRLQFAWFAVALALVVTGCDHKPTKEEEEAAKNTITCQLAGDRLVIRFDSGEVRLLTATAERITLYQIPSGAVMRYSNGNMELRGKGLEWTLTDLGASTTLESCKQYAAPKP
Ga0207692_102563212	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRFDFAWFAAALALIGTGCEHKPSKEETEAAKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMEWTLTELGVPTTLE
Ga0209871_11168981	3300026217	Permafrost Soil	TAGEKPMRMGFVWLAAALALVVTGCDHKPSKEEEDVAKNTITCQLAGERLVIRFDSGEVRMLTSTAESITLYQIPSGAVMRYSNGNLELRGKGMEWTLTDLGTATTLESCKRYAAPKP
Ga0209890_100892772	3300026291	Soil	PNFAWFTVALALFVAGCEHKPSKEEEDAAKNTITCQLASDRLVIRFESGEVRMLTATAEAITLYQIPSGAVMRYSNGNLELRGKGMEWTLSDLGVTTTLESCKRYEAPKP
Ga0209839_100008108	3300026294	Soil	MRPNFAWFTVALALFLAGCEHKPSKEEEEAAKNTISCQLAGDRLVIRFESGEVRMLTATAEAITLYQIPSGAVMRYSNGNLELRGKGMEWTLSDLGVTTTLESCKRYEAPKP
Ga0209839_100674642	3300026294	Soil	MRMGFVWLAAALALVVTGCDHKPSKEEEDVAKNTITCQLAGERLVIRFDSGEVRMLTSTAESITLYQIPSGAVMRYSNGNLELRGKGMEWTLTDLGTATTLESCKRYAAPKP
Ga0209839_102440631	3300026294	Soil	MRLEFAWFAVALALVATGCEHKPTKEEEEAARNTITCQLAGDRLVIRFDSGEVRLLTATAEKITLYQIPSGAVMRYSNGNLELRGKGLEWTLTDLGAS
Ga0209686_11565852	3300026315	Soil	PQSQDRQAKIVARRNAGRAKPGRLDFAWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0209471_10678332	3300026318	Soil	MKPQSQDRQAKIVARRNAGRAKPGRLDFAWLVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0209152_102201461	3300026325	Soil	AWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0209267_10626351	3300026331	Soil	ALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYGAPKP
Ga0209804_10696913	3300026335	Soil	PMKPQSQDRHAKIVARHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0209474_104385332	3300026550	Soil	RRQLIGCTAITVAVAVVVGCEQIHKPTKEEEQAAKNTFACQLVGERLIVRFESGEARMLTATGEKITLYQIPSTSGGMRYSNGNVELRGKGMDLTLTENGASTPLEGCQQYTPPKP
Ga0209734_10474602	3300027535	Forest Soil	MKPQSQDRHAKIVARHNAARAKPTRLDFVWFVAALALISTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0209735_10284752	3300027562	Forest Soil	MKRQSQDRHAKIVARHNAARAKPTRLDFVWFVAALSLIGTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0209219_10004036	3300027565	Forest Soil	MKPQSQDRHPKIVARHNAARAKTRRRDFACVVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0209220_11341092	3300027587	Forest Soil	SFARFCASQRPMKPQSQDRHPKIVARHNAARAKTRRRDFAWVVAALALISTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0209733_11139421	3300027591	Forest Soil	KPQSQDRHAKIVARHNAARAKTRRRDFACVVAALALISTGCEHKPSKEEEEATKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP
Ga0209329_10412082	3300027605	Forest Soil	LKPQSQDRHAKIVGRHNAARARPGRLDFAWFVAALALISTGCEHKPSKEETEATKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGT
Ga0209625_10492242	3300027635	Forest Soil	LKPQSQDRHAKIVGRHNAARARPGRLDFAWFVAALALISTGCEHKPSKEETEATKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGTLTTLESCKQY
Ga0209117_10153842	3300027645	Forest Soil	VRHFVARKKTMRLDFVWFAAALALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQISTGATTRYSNGNVELRGKGMDWTLTELGASTTLESCKQYAAPKP
Ga0209217_11222432	3300027651	Forest Soil	VRHFVARQKTMRLDFVWFAAALALIVTGCEHKPTKEEEEATKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQISTGATTRYSNGNVELRGKGMDWTLTELGASTTLESCKQYAAPKP
Ga0209328_100183981	3300027727	Forest Soil	MKPQSQDRHAKNAARVKTRRLDLAWFVAALALIGTGCEHKPSKEETEATKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGTLTTLESCKQYAAPKP
Ga0209689_14345871	3300027748	Soil	RHNAARAKPRRLGFAWLVAALALVSTGCEHKPSKEEEESAKNTITCQLAGERLVIRFDSGEARMLTATSEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPK
Ga0209526_103787181	3300028047	Forest Soil	RQRPMKPQSQDRHAKNAARVKTRRLDLAWFVAALALISTGCEHKPSKEETEATKNTITCQLAGDRLVIRFEPGEARMLTATAETITLYQIPSGAVMRYSNGNVELRGKGMDWTLTELGTLTTLESCKQYAAPKP
Ga0170834_1056369272	3300031057	Forest Soil	MLAAVSGCDHKPTKEEEEAAKNTFVCQLVGERLVIRFESGEARMLTSAGEKITLYQLPSSTGVRYSNGTVELRGRGADLVMIENGASTTLDGCKPLTPPKP
Ga0170824_1030351431	3300031231	Forest Soil	VKPQSQDRHAKIVVRDDAARAKPRRLDFAWFVAALALIGTGCEHKPTKEEEDSAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGFSTTLESCKQ
Ga0307471_1019832332	3300032180	Hardwood Forest Soil	RHAKIIVRHDAAPAKPKRFDFACFVAALALISTGCEHKPTKEEEESAKNTITCQLAGERLVIRFDSGEARMLTAASEKITLYQIPSGGGTRYSNGNVELRGKGMDWTLTELGVSTTLESCKQYAAPKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076290

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences