Metagenome Family F076268

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076268
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	66 residues
Representative Sequence	VVYVQVTDIHASCKKAKELGGTVVPGFPFNLPDGTGAIGLVVDPAGHPVGLYSRTPLPPAPSPTK
Number of Associated Samples	107
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.85 %
% of genes near scaffold ends (potentially truncated)	88.98 %
% of genes from short scaffolds (< 2000 bps)	91.53 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.220 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.322 % of family members)
Environment Ontology (ENVO)	Unclassified (23.729 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.373 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.75% β-sheet: 21.51% Coil/Unstructured: 67.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
d.32.1.6: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	d1ss4a1	1ss4	0.72
d.32.1.6: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	d1ss4a1	1ss4	0.72
d.32.1.1: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	d1fa8a_	1fa8	0.71
d.32.1.1: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	d1fa8a_	1fa8	0.71
d.32.1.0: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	d3hdpa_	3hdp	0.69
d.32.1.0: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	d3hdpa_	3hdp	0.69
d.32.1.2: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	d1klla_	1kll	0.66
d.32.1.3: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	d3isqa1	3isq	0.66
d.32.1.2: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	d1klla_	1kll	0.66
d.32.1.3: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	d3isqa1	3isq	0.66

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF08818	DUF1801	5.08
PF01177	Asp_Glu_race	1.69
PF07883	Cupin_2	1.69
PF12681	Glyoxalase_2	1.69
PF14534	DUF4440	1.69
PF13517	FG-GAP_3	1.69
PF10978	DUF2785	1.69
PF03781	FGE-sulfatase	1.69
PF06983	3-dmu-9_3-mt	1.69
PF13521	AAA_28	0.85
PF00515	TPR_1	0.85
PF00872	Transposase_mut	0.85
PF04978	DUF664	0.85
PF14485	DUF4431	0.85
PF01061	ABC2_membrane	0.85
PF05988	DUF899	0.85
PF16491	Peptidase_M48_N	0.85
PF00082	Peptidase_S8	0.85
PF00484	Pro_CA	0.85
PF01872	RibD_C	0.85
PF13711	DUF4160	0.85
PF08240	ADH_N	0.85
PF00882	Zn_dep_PLPC	0.85
PF12867	DinB_2	0.85
PF08327	AHSA1	0.85
PF12637	TSCPD	0.85
PF02311	AraC_binding	0.85
PF13565	HTH_32	0.85
PF07681	DoxX	0.85
PF05768	Glrx-like	0.85
PF00903	Glyoxalase	0.85
PF13493	DUF4118	0.85
PF10609	ParA	0.85
PF02775	TPP_enzyme_C	0.85
PF01569	PAP2	0.85
PF11006	DUF2845	0.85
PF13376	OmdA	0.85
PF13088	BNR_2	0.85
PF00106	adh_short	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	5.08
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	5.08
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	5.08
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	1.69
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	1.69
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	1.69
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.85
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.85
COG0695	Glutaredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.85
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.85
COG3118	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.85
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.85
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.22 %
Unclassified	root	N/A	6.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.22 %
Unclassified	root	N/A	6.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.22 %
Unclassified	root	N/A	6.78 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	38.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.32 %
Unclassified	root	N/A	6.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	37.29 %
Unclassified	root	N/A	6.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.54 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.54 %
candidate division Zixibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria	1.69 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	29.66 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	6.78 %
Unclassified	root	N/A	6.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.54 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.54 %
unclassified candidate division Zixibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria	1.69 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	29.66 %
Verrucomicrobia bacterium SCGC AG-212-E04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	6.78 %
Unclassified	root	N/A	6.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.54 %
candidate division Zixibacteria bacterium RBG_16_53_22	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	1.69 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	1.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	29.66 %
Verrucomicrobia bacterium SCGC AG-212-E04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	6.78 %
Unclassified	root	N/A	6.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.54 %
candidate division Zixibacteria bacterium RBG_16_53_22	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	1.69 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	1.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	29.66 %
Verrucomicrobia bacterium SCGC AG-212-E04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	6.78 %
Unclassified	root	N/A	6.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.54 %
candidate division Zixibacteria bacterium RBG_16_53_22	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	1.69 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	1.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01CLRK4	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	547	Open in IMG/M
3300000550\|F24TB_11238257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300000955\|JGI1027J12803_107340519	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300003152\|Ga0052254_1027551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	579	Open in IMG/M
3300004019\|Ga0055439_10295498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	534	Open in IMG/M
3300004145\|Ga0055489_10037978	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300004157\|Ga0062590_101724625	Not Available	639	Open in IMG/M
3300004267\|Ga0066396_10072766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300004480\|Ga0062592_101661213	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005093\|Ga0062594_102175413	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	599	Open in IMG/M
3300005332\|Ga0066388_103533315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	798	Open in IMG/M
3300005332\|Ga0066388_108809231	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	501	Open in IMG/M
3300005340\|Ga0070689_100029569	All Organisms → cellular organisms → Bacteria → Proteobacteria	4149	Open in IMG/M
3300005340\|Ga0070689_101621357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	588	Open in IMG/M
3300005354\|Ga0070675_102019504	Not Available	532	Open in IMG/M
3300005440\|Ga0070705_100911225	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	708	Open in IMG/M
3300005444\|Ga0070694_101703597	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005445\|Ga0070708_101039996	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005456\|Ga0070678_100335072	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300005457\|Ga0070662_100201134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	1581	Open in IMG/M
3300005459\|Ga0068867_101717179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	589	Open in IMG/M
3300005471\|Ga0070698_100824813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	872	Open in IMG/M
3300005471\|Ga0070698_101775222	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	570	Open in IMG/M
3300005545\|Ga0070695_100683332	Not Available	813	Open in IMG/M
3300005545\|Ga0070695_101895573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	501	Open in IMG/M
3300005564\|Ga0070664_100711751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	936	Open in IMG/M
3300005836\|Ga0074470_11042298	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1154	Open in IMG/M
3300005842\|Ga0068858_100809065	Not Available	914	Open in IMG/M
3300005844\|Ga0068862_100627501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1034	Open in IMG/M
3300005949\|Ga0066791_10047620	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005993\|Ga0080027_10441969	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300005995\|Ga0066790_10307554	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300006049\|Ga0075417_10494665	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	614	Open in IMG/M
3300006178\|Ga0075367_10803316	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006358\|Ga0068871_101231137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	703	Open in IMG/M
3300006847\|Ga0075431_101791754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	570	Open in IMG/M
3300006847\|Ga0075431_102139031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	514	Open in IMG/M
3300006904\|Ga0075424_100493701	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1307	Open in IMG/M
3300007076\|Ga0075435_100341872	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300009029\|Ga0066793_10064578	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300009100\|Ga0075418_10376326	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300009100\|Ga0075418_10987576	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300009147\|Ga0114129_10265564	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300009156\|Ga0111538_10465464	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300009162\|Ga0075423_12977350	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300009169\|Ga0105097_10145591	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300009545\|Ga0105237_11584321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	662	Open in IMG/M
3300009553\|Ga0105249_10186722	All Organisms → cellular organisms → Bacteria	2020	Open in IMG/M
3300010039\|Ga0126309_10006760	All Organisms → cellular organisms → Bacteria	4523	Open in IMG/M
3300010046\|Ga0126384_12047165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	548	Open in IMG/M
3300010360\|Ga0126372_10709187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	983	Open in IMG/M
3300010400\|Ga0134122_13016272	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	525	Open in IMG/M
3300011402\|Ga0137356_1102868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	540	Open in IMG/M
3300012039\|Ga0137421_1116821	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300012142\|Ga0137343_1061441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	554	Open in IMG/M
3300012360\|Ga0137375_11059803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	633	Open in IMG/M
3300012948\|Ga0126375_10514897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	895	Open in IMG/M
3300012948\|Ga0126375_11698969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	547	Open in IMG/M
3300013296\|Ga0157374_12972136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	501	Open in IMG/M
3300014326\|Ga0157380_11977751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	644	Open in IMG/M
3300015158\|Ga0167622_1059045	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300015371\|Ga0132258_10886871	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300015371\|Ga0132258_13439980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1086	Open in IMG/M
3300015372\|Ga0132256_100805451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1056	Open in IMG/M
3300015373\|Ga0132257_101839712	Not Available	778	Open in IMG/M
3300016357\|Ga0182032_11460274	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	593	Open in IMG/M
3300017939\|Ga0187775_10372031	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300017947\|Ga0187785_10795892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	502	Open in IMG/M
3300017965\|Ga0190266_10163315	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300018072\|Ga0184635_10137535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	974	Open in IMG/M
3300018084\|Ga0184629_10550606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	594	Open in IMG/M
3300018084\|Ga0184629_10550608	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	594	Open in IMG/M
3300018422\|Ga0190265_11529036	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300018465\|Ga0190269_10031968	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300025910\|Ga0207684_10244236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1549	Open in IMG/M
3300025922\|Ga0207646_11796783	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300025925\|Ga0207650_11818581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	515	Open in IMG/M
3300025930\|Ga0207701_10538835	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300025936\|Ga0207670_10107999	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300025936\|Ga0207670_11930148	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300025937\|Ga0207669_10514892	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300025942\|Ga0207689_10739183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300026271\|Ga0209880_1092290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	620	Open in IMG/M
3300026281\|Ga0209863_10211484	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300026294\|Ga0209839_10169272	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300026316\|Ga0209155_1223192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	587	Open in IMG/M
3300027533\|Ga0208185_1028239	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300027873\|Ga0209814_10330038	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	666	Open in IMG/M
3300028587\|Ga0247828_10085949	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300031232\|Ga0302323_100559525	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300031545\|Ga0318541_10869464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	503	Open in IMG/M
3300031712\|Ga0265342_10651620	Not Available	529	Open in IMG/M
3300031740\|Ga0307468_101437947	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300031834\|Ga0315290_11024596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	694	Open in IMG/M
3300031854\|Ga0310904_10296368	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300031854\|Ga0310904_10665034	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300031879\|Ga0306919_11106724	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	604	Open in IMG/M
3300031949\|Ga0214473_12418131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	500	Open in IMG/M
3300031997\|Ga0315278_12101460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	525	Open in IMG/M
3300032001\|Ga0306922_11776347	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	608	Open in IMG/M
3300032002\|Ga0307416_103406143	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	532	Open in IMG/M
3300032012\|Ga0310902_10715139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	676	Open in IMG/M
3300032064\|Ga0318510_10187671	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300032067\|Ga0318524_10645493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	558	Open in IMG/M
3300032076\|Ga0306924_11347661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	764	Open in IMG/M
3300032090\|Ga0318518_10181282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300032211\|Ga0310896_10736407	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300032261\|Ga0306920_103414091	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	589	Open in IMG/M
3300032893\|Ga0335069_11432380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300032954\|Ga0335083_11368206	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300033004\|Ga0335084_12038718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	558	Open in IMG/M
3300033482\|Ga0316627_100033337	All Organisms → cellular organisms → Bacteria	2913	Open in IMG/M
3300033550\|Ga0247829_10505135	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300034132\|Ga0334915_124358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	543	Open in IMG/M
3300034177\|Ga0364932_0282880	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	627	Open in IMG/M
3300034178\|Ga0364934_0298982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	610	Open in IMG/M
3300034195\|Ga0370501_0246121	Not Available	637	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.03%
Host-Associated	Host-Associated	27.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.17%
Plants	Host-Associated → Plants	27.97%
Aquatic	Environmental → Aquatic	11.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.49%
Sediment	Environmental → Aquatic → Sediment	6.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.78%
Freshwater	Environmental → Aquatic → Freshwater	3.39%
Marine	Environmental → Aquatic → Marine	1.69%
Floodplain	Environmental → Terrestrial → Floodplain	1.69%
Roots	Host-Associated → Plants → Roots	1.69%
Peat	Environmental → Terrestrial → Peat	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.66%
Loam	Environmental → Terrestrial → Soil → Loam	15.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.54%
Lake	Environmental → Aquatic → Freshwater → Lake	1.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.85%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.85%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.54%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.69%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.85%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.85%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.24%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.39%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.54%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	2.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.54%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.85%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.85%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012142	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT499_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_08789800	2170459009	Grass Soil	VVYVQVTDIQASCKKAKELGGTIPPGFPFDLHDGIGAIALVVDPAGHAVGLYSRTPLAPSPAK
F24TB_112382571	3300000550	Soil	EGKISPFNGVVYVQVTDLPVSCKKAAELGGTLVPGFPFNLLDGTGAIGLFTDPSGHPMGMYSRTPLPPERPK*
JGI1027J12803_1073405193	3300000955	Soil	VYVQVQDIQESCRRAQELGGTLVPGFPFDLPNATGAIGLVSDPAGHPVGMYSRTPIASQKPGSK*
Ga0052254_10275511	3300003152	Sediment	QISAFNGVVYVQVSDLTASRKKATELGGKVVPGFPFNLPDGRGAIGLIGDPSGHPIGMYSRTALPDGK*
Ga0055439_102954981	3300004019	Natural And Restored Wetlands	AEGPISGYDGVVYVQVADIEASCAKAKELGATLIPGFPFNLTNRTGAIGLFLDPAGHPMGMYSRTPMAEAKSPPK*
Ga0055489_100379781	3300004145	Natural And Restored Wetlands	QVKDMPASCARAKELGGTIPPGFPFDLNDEKGSVAVVIDPAGHPVGMYSRTPLPAAAK*
Ga0062590_1017246252	3300004157	Soil	VVYVQVPDLVESCKKVKELGGTVVPGFPFNLSGGAGAVGLLLDPSGHPMGMYSRTPLPSPVK*
Ga0066396_100727661	3300004267	Tropical Forest Soil	ATEESCKKAKELVGTLVPGFPFDLPDGTGAIGLLSDPAGHPVGMYGRTLLARQKPGSK*
Ga0062592_1016612131	3300004480	Soil	VADIQASCKKAKDLGATLVPGFPFNLPDGTGAIGLIADPSGHPLGMYSRTPIAPQKPTAK
Ga0062594_1021754131	3300005093	Soil	FNGVVYVQVSDIQERCKKAKELGASIAPGFPFDLPDARGAIALLAEPSGHPVGMYSRVPLPQAK*
Ga0066388_1035333151	3300005332	Tropical Forest Soil	RKAEGKISPYDGVVYIQVKDLPASCAKAKELGGTIVPGFPFDLEDGRGAIGLVVDPSGHPVGMYSRTGLPKAAK*
Ga0066388_1088092311	3300005332	Tropical Forest Soil	NGVVYIQVPDMIKACEVVKELGGKLVPGFPFNRSDNAGCIALFTDPSGHPMGMFSRTPLPAPPPAAK*
Ga0070689_1000295691	3300005340	Switchgrass Rhizosphere	VVYIQVDDIQASCKKAAELGGKVVPGFPFNLSNGGGAIGLVVDPAGHPIGMYSRTPRPEAPAKK*
Ga0070689_1016213572	3300005340	Switchgrass Rhizosphere	VQVDDIQAACAKAKELGATVIPGFPFDLPDRPGAIGLFLDPAGHPMGMYSRTPIAAAKSPPK*
Ga0070675_1020195041	3300005354	Miscanthus Rhizosphere	VVYIQVDDIQASCKKAKELGGSIPPGFPFNLSDDGGAIALVVDPAGHPIDMYSRTPLPETPAAK*
Ga0070705_1009112251	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VVYIQVDDIQASCKKAAELGGKVVPGFPFNLSNGGGAIGLVVDPAGHPIGMYSRTPLPEAPAKK*
Ga0070694_1017035972	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GKISPFNGLVYVQVTDIQASCRKAKELGGAVVPGFPFNLPDGIGAIAVAVDPAGHPIGLYSRTPLPPAPSPSK*
Ga0070708_1010399961	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ISPFNGIVYVQVTDIQASCKKVSQLGGTVAPGFPFNLADGTGAIAVIVDPAGHPVGLYSRTPLPPAPSPTK*
Ga0070678_1003350721	3300005456	Miscanthus Rhizosphere	YDGVVYIQVDDIQASCKKAAELGGKVVPGFPFNLSNGGGAIGLVVDPAGHPIGMYSRTPFPEAPAKK*
Ga0070662_1002011342	3300005457	Corn Rhizosphere	YDGVVYIQVKDMPASCAKAKELGGRIPEGFPFNLSGDGGAVALVVDPAGHPIGMYSRTLLPEAAK*
Ga0068867_1017171791	3300005459	Miscanthus Rhizosphere	VVYIQVDDIQASCKKAKELGGTIPPGFPFNLSDDGGAVALVVDPAGHPVGMYSRTPLPEPPAAK*
Ga0070698_1008248131	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EGKISPFNGVVYVQVTDIQASCKKAKDLGGTVVPGFPFNLPDGIGAIAVVADPAGHPVGMYSRTPLPSKPLSPAR*
Ga0070698_1017752221	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DIQAACAKAKELGATVIPGFPFDLPDRPGAIGLFLDPAGHPMGMYSRTPIAEEKSPPK*
Ga0070695_1006833321	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	DGALSVFNGVVYVQVTDILASCKKARELGGTIPPGFPFNLPGGIGAIAVVVEPSGHPIGLYSRTPFRPN*
Ga0070695_1018955731	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	EGPISAFNGVVYIQVDDIQASCKKAKELGGTIPPGFPFNLSDDGGAVALVVDPAGHPVGMYSRTPLPEPPAAK*
Ga0070664_1007117511	3300005564	Corn Rhizosphere	VVYIQVDDIQASCKKAKELGGTIPPGFPFNLSGDGGAVALVVDPAGHPVGMYSRTPLPEPPAAK*
Ga0074470_110422981	3300005836	Sediment (Intertidal)	SFNGVVYVQVTDIQAACKKAKDLGATLVPGFPFDLADDAGAIGLIADPTGHPIGMYSRTPLAKAAPPKK*
Ga0068858_1008090652	3300005842	Switchgrass Rhizosphere	SAEGKISGFNGVVYVQVPDIVESCMKVKELGGTVVTGFPFNLSGGAGAVGLFLDPSGHPMGMYSRTPLPSAVK*
Ga0068862_1006275011	3300005844	Switchgrass Rhizosphere	GVVYIQVDDIQASCKKAKELGGTIPPGFPFNLSDDGGAVALVVDPAGHPVGMYSRTPLPEPPAAK*
Ga0066791_100476201	3300005949	Soil	ISPANGVVYVQVADMVVSCELVKQLGGKIVPGFPFNRSDGQGAIGLFLDPSGHPVGMYSKAPLPTASLPAK*
Ga0080027_104419691	3300005993	Prmafrost Soil	QVTDIMASCKKATTLGGTVVAGFPFNLPDGIGAIALVVDPAGHPVGMYSRKPLPSAPSPPK*
Ga0066790_103075541	3300005995	Soil	VTDIQASCKKATQIGGTIPPGFPFNLSDGAGAIAVVVDPVGHPLGLYSRTPLPPKPTPTK
Ga0075417_104946651	3300006049	Populus Rhizosphere	VQADALSAFNGVVYVQVDDLPASCKKAKELGGIIPPGFPFNLPEERGAIALVSDPAGHPIGMYSRTPLPSAPPSGR*
Ga0075367_108033161	3300006178	Populus Endosphere	VYVQVPDIQESCKKAKALGGTLVPGFPFDLPNGTGAIGLVSDPAGHPVGMYSRTPIAPQNPGSK*
Ga0068871_1012311372	3300006358	Miscanthus Rhizosphere	DGKISPFDGVVYIQVSDLPGKCAKAKELGGMIPPGFPFNLGDDKGAIAIVADPSGHPIGMYSRTPLPPAAK*
Ga0075431_1017917541	3300006847	Populus Rhizosphere	ISPANGVVYVQVLDIQESCKKAKELGGTLVPGFPFDLPNGTGAIGLVSDPAGHPVGMYSRTPLAPQKPGSN*
Ga0075431_1021390312	3300006847	Populus Rhizosphere	ISASNGVVYVQVKDIEAACRKAKELGATIVPGFPFNLSNGTGAIGMFTDPAGHPLGLYSRTPIAPPKPAAK*
Ga0075424_1004937012	3300006904	Populus Rhizosphere	ISSFNGVVYVQVADLRAKCKKAQELGGTIPPGFPFDLPDGRGAIAIVSDPAGHPVGLYSRTPLPKPAK*
Ga0075435_1003418724	3300007076	Populus Rhizosphere	VYVQVNDLPAACKKAKDLGATIVPGFPFDLPGGTGAIALLTDPSGHPLGMYSRTPLPPANPKK*
Ga0066793_100645781	3300009029	Prmafrost Soil	VVYVQVTDIHASCKKAKELGGTVVPGFPFNLPDGTGAIGLVVDPAGHPVGLYSRTPLPPAPSPTK*
Ga0075418_103763264	3300009100	Populus Rhizosphere	GVVYVQVKDIEAACRKAKELGATIVPGFPFNLSNGTGAIGLFTDPAGHPMGLYSRTPIAPPKPAAK*
Ga0075418_109875763	3300009100	Populus Rhizosphere	FNGVVYVQVTDIQAGCKKAQALGGTVVPGFPFNLPDGIGAIALVVDPAGHPVGLYSRTPLPPTPSPAK*
Ga0114129_102655641	3300009147	Populus Rhizosphere	VQADALSAFNGVVYVQVDDLPASCKKAKELGGIIPPGFPFNLPEERGAIALVSDPAGHPIGMYSRTPLPSAPPSSR*
Ga0111538_104654644	3300009156	Populus Rhizosphere	ACRKAKELGATIVPGFPFNLSNGTGAIGVFTDPAGHPMGIYSRTPIAPPKPAAK*
Ga0075423_129773501	3300009162	Populus Rhizosphere	VYVQVSDIQASCRKSTDLGGTLVPGFPFDLPDGRGAVALILDPAGHPVGLYSRTPLAQKTR*
Ga0105097_101455912	3300009169	Freshwater Sediment	VQVADIQASCKKVQELGGTVAPGFPFNLPDGIGAIALVLDPAGHPLGLYSRTPLASAGPSAK*
Ga0105237_115843211	3300009545	Corn Rhizosphere	VDDIQESCRKAKELGGTLIPGFPFDLSDRRGAIGLVNDPTGHPIGMYSRTPLAHK*
Ga0105249_101867222	3300009553	Switchgrass Rhizosphere	VVYVQVTDIQASCKKAKELGGMIPPGFPFNLPDGIGAIAVVVDPAGHPIGLYSRTPLAPAPSGQMRTDLW*
Ga0126309_100067604	3300010039	Serpentine Soil	VVYVQVTDLQASCKKAKELGGTIPPGFPFDLPNGIGAIALVVDPAGHPVGLYSRIPLAPVPSPAR*
Ga0126384_120471652	3300010046	Tropical Forest Soil	QVSATEESCKKAKELVGTLVPGFPFDLPDGTGAIGLLSDPAGHPVGMYGRTLLARQKPGSK*
Ga0126372_107091871	3300010360	Tropical Forest Soil	ISAFNGVVYVQVSDIIAACKKVTELGGKVVPGFPFNLPDSAGAIAVLVDPSGHPLGLYSRTSLVPGRASAR*
Ga0134122_130162721	3300010400	Terrestrial Soil	SPFNGVVYVQVTDIQASCKKAKDLGGTVVPGFPFNLPDGIGAIALVADPGGHPVGMYSRTPLPSKPSPAK*
Ga0137356_11028681	3300011402	Soil	SNFNGVVYVQVSDLPAACKKARELGGTVPPVFPFNLPDGTGAIALLSDPAGHPIGMYSNTLLPSAAPPGR*
Ga0137421_11168211	3300012039	Soil	LPAACKKARELGGTVPSVFSFNLPDGTGAIALLSDPAGHPIGMYSNTLLPSAAPPGR*
Ga0137343_10614411	3300012142	Soil	FNGVVYVQVSDLPAACKKARELGGTVPPVFPFNLPDGTGAIALLSDPAGHPIGMYSNTLLPSAAPPGR*
Ga0137375_110598032	3300012360	Vadose Zone Soil	SFNGVVYVQLPSIQENCKKATELGGTLVPGFPFNLPNGTGAIALVSDPSGHPLGMYSGTPIAPQKPVSE*
Ga0126375_105148971	3300012948	Tropical Forest Soil	IYVQVSDIQASCRKAKELGGTLAPGFPFNLPDGTGAIGLILDPSGHPMGMYSRSLIPGASQSK*
Ga0126375_116989691	3300012948	Tropical Forest Soil	AEGQISVFNGVVYVQVSDIRASCAKAKDLGGTVPPGFPFNLPDGAGAVGLTVDPGGHPIGMYSRTPLPAAEPSAK*
Ga0157374_129721362	3300013296	Miscanthus Rhizosphere	YIQVKDMTASCAKAKEFGGTIPPGFPFNLNDDRGAVGLVIDPAGHPIGMYSRTSLPAPAK
Ga0157380_119777511	3300014326	Switchgrass Rhizosphere	GVVYIQVDDIQASCKKAKELGGTIPPGFPFNLSGDGGAVALVVDPAGHPVGMYSRTPLPEPPAAK*
Ga0167622_10590451	3300015158	Glacier Forefield Soil	SPFNGVVYIQVSDLPGSCQKAKELGGTIVPGFPFDLPDNRGAIGLLTDPSGHPLGLYSRTSLPAASPAR*
Ga0132258_108868715	3300015371	Arabidopsis Rhizosphere	VSDLPASCAKATAMGGKIVPGFPFNLTGRPGAIALLADPSGHPIGMYSRTPLPAAR*
Ga0132258_134399801	3300015371	Arabidopsis Rhizosphere	AYAKAKELGATVIPGFPFNLTNKPGAIGLFLDPAGHPMGMYSRTPIPEEKTAPK*
Ga0132256_1008054513	3300015372	Arabidopsis Rhizosphere	VVYIQVKDMPASCAKAKELGGTIPPGFPFNLNEDKGAVALVVDPAGHPVGMYSRTPLPAAAK*
Ga0132257_1018397123	3300015373	Arabidopsis Rhizosphere	VVYVQVTDILASCKKARELGGTIPPGFLFNLPGGIGAIAVVVEPSGHPIGLYSRPPFRPN
Ga0182032_114602741	3300016357	Soil	DDIQASCKKAAELGGKVVPGFPFNLSNGGGAIGLVIDPAGHPIGMYSRTPLPEAPAKK
Ga0187775_103720312	3300017939	Tropical Peatland	DGKISPFNGVVYVQVADIQASCKKVKELGGMIAPAFPFNLPDGSGAIALVLDPAGHPVGMYSRTPLPPAAPAGK
Ga0187785_107958921	3300017947	Tropical Peatland	VYIQVKDVTASCAKAKELGGTIVPGFPFNLEDGRGAIGLVIDPAGHPIGMYSRTPVPKAQ
Ga0190266_101633151	3300017965	Soil	NGVVYVQVLDIQESCKKAKALGGTLVPGFPFDLPNGTGAIGLVSDPAGHPVGMYSRTPIAPQTPGSK
Ga0184635_101375353	3300018072	Groundwater Sediment	NGVVYVQVNDVESSCKKVKELGGTIPPGFPFNLPDGSGAVGLALDPVGHPVGLFSSKLVREADSK
Ga0184629_105506061	3300018084	Groundwater Sediment	RVAEGKISPFNGVIYVQVTDIQASCRKSQELGGTVAPGFPFDLPDGIGAVALVFDPAGHPMGMYSRTPLAVPPTQ
Ga0184629_105506081	3300018084	Groundwater Sediment	RVAEGKISPFNGVIYVQVTDIQASCRKSQELGGTVAPGFPFNLPDGIGAVALVFDPAGHPMGMYSRTPLAVPPTQ
Ga0190265_115290362	3300018422	Soil	YVQVTDIQASCKKAKELGGTVPPGFPFNLPDGIGAIAVVVDPAGHPIGLYSRTPLPPAPSPVK
Ga0190272_119908512	3300018429	Soil	ETSCRKAKELGGTIPSGFPFNLPDGTGAIALVLDPSGHPVGLYSRTPLAPAASPAK
Ga0190269_100319681	3300018465	Soil	GVVYVQVTDIQASCKKAKELGGTIPPGFPFNLPDGIGAIAVVIDPAGHPIGLYSRTPLPPAPSPAK
Ga0207684_102442365	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VFNGVVYVQVADIQASVKKSKDLGGTVAPGFPFNLPDGTGAIALILDPAGHPVGMYSRTRLA
Ga0207646_117967831	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	QVTDIQASCKKANQLGGTVVPGFPFNLPDGTGAIALVVDPAGHPIGLYSRTPLPPRPSPT
Ga0207650_118185811	3300025925	Switchgrass Rhizosphere	RVAEGPISAFNGVVYIQVDDIQASCKKAKELGGTIPPGFPFNLSDDGGAVALVVDPAGHPVGMYSRTPLPEPPAAK
Ga0207701_105388353	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	IQVDDIQASCKKAKELGGSIPPGFPFNLSDDGGAIALVVDPAGHPIGMYSRTPLPEPPAA
Ga0207670_101079994	3300025936	Switchgrass Rhizosphere	GAISAYDGVVYIQVDDIQASCKKAAELGGKVVPGFPFNLSNGGGAIGLVVDPAGHPIGMYSRTPRPEAPAKK
Ga0207670_119301481	3300025936	Switchgrass Rhizosphere	RSAEGKISGFNGVVYVQVPDIVESCMKVKELGGTVVTGFPFNLSGGAGAVGLFLDPSGHPMGMYSRTPLPSAVK
Ga0207669_105148923	3300025937	Miscanthus Rhizosphere	RESCKKAQALGGTLVPGFPFDLPNGTGAIGLVSDPAGHPVGMYSRTPIAPRPPGSK
Ga0207689_107391833	3300025942	Miscanthus Rhizosphere	VYVQVADILASCKKARELGGTIPPGFPFNLPGGIGAIAVVVEPSGHPIGLYSRTPFRPN
Ga0209880_10922902	3300026271	Soil	KFNGVVYVQVTDIQASCKKVKQLGGKVVAGFPFNLPDGAGAVAVVVDPAGHPVGLYSRTPLPSAPSPTK
Ga0209863_102114842	3300026281	Prmafrost Soil	IQASCKKATQLGGTVPPGFPFNLNAGVGAIAIVVDPSGHPVGLYSRTPLPPAPSPTK
Ga0209839_101692721	3300026294	Soil	KISPFDGVVYVQVTDIQASCKKATQIGGTIPPGFPFNLSDGAGAIAVVVDPVGHPLGLYSRTPLPPKPTPTK
Ga0209155_12231922	3300026316	Soil	VAEGKISGFNGVVYVQVTDIQASCKKSKELGGTVVAGFPFNLPDGTGAIALVLDPTGHPVGLYSRTPLAPAVPPAK
Ga0208185_10282393	3300027533	Soil	RGAEGQISPFNGVVYVQVRDIQESCKKAKELGGTLVPGFPFDLPNGTGAIGLVTDPTGHPVGMYSRTPLAPQKPASK
Ga0209814_103300381	3300027873	Populus Rhizosphere	VQADALSAFNGVVYVQVDDLPASCKKAKELGGIIPPGFPFNLPEERGAIALVSDPAGHPIGMYSRTPLPSAPPSGR
Ga0247828_100859493	3300028587	Soil	VQVLNIEESCKKAKELGGTLVPGFPFDLPNGTGAIGLVTDPAGHPVGMYSRTPLAPQKPASK
Ga0302323_1005595252	3300031232	Fen	SPFNGVVYVQVTDIQASCKKAKELGGTVVPGFPFNLPDGTGAIGLAVDPAGHPVGLYSRTPLAPPPTPTK
Ga0318541_108694642	3300031545	Soil	GFNGMVYVQVTDLPASCKKATELGGTIPPGFPFNLPEDTGAIAVVVDPSGHPVGMYSRTPLAARPPAQ
Ga0265342_106516201	3300031712	Rhizosphere	QVKDMTASCAKAKELGGTIAPGFPFNLNDDRGAIGLVIDPAGHPFGMYSRTPLPKAAK
Ga0307468_1014379472	3300031740	Hardwood Forest Soil	VVYVQVTDIQASCNKAKDLGGTVVPGFPFDLSDGGGAVGLVADPAGHPVGMYSRTPLAAKATPPAK
Ga0315290_110245961	3300031834	Sediment	IQASCRKSKELGGTVAPGFPFNLPDGIGAIALVLDPTGHPVGLYSRTPLASAVPPAN
Ga0310904_102963681	3300031854	Soil	IADGPIAAFNGVVYVQVSDLSASCKRAAALGGKVVPGFPFNLPDRPGAIALVMDPTGHPIGMYSRTRLPGAK
Ga0310904_106650341	3300031854	Soil	LRGAEGKISPFNGVVYVQVSDIQERCKKAKELGASIAPGFPFDLPDARGAIALLAEPSGHPVGMYSRVPLPKAK
Ga0306919_111067242	3300031879	Soil	GKLSPYDGVVYIQVKDLTASCAKAKELNGQIVPGFPFNLTDDRGAIALVIDPAGHPIGMYSRTPLPKGKS
Ga0214473_124181311	3300031949	Soil	STFNGVVYVQVTDIQAGCKKAQELGGTVVPGFPFNLPDGTGAIALVVDPAGHPVGLYSRTPLAPTPSPAK
Ga0315278_121014601	3300031997	Sediment	AEGKISPFNGVIYVQVTDIQASCRKSKELGGTVAPGFPFNLPDGIGAIALVLDPTGHPVGMYSRTPLASAVPPAN
Ga0306922_117763472	3300032001	Soil	AEGKLSPYDGVVYIQVKDLTASCAKAKELNGQIVPGFPFNLTDDRGAIALVIDPAGHPIGMYSRTPLPKGKS
Ga0307416_1034061432	3300032002	Rhizosphere	FNGVVYIQVTELPAHIKKATSFGATLVPGFPFNLPDGTGAIALITDPSGHPLGMYSRAPLVLAK
Ga0310902_107151391	3300032012	Soil	YVQVTDLPGSIKKATSLGATIVPGFPFNLPDGVGAIALITDPSGHPVGMYSRTLLVPAK
Ga0318510_101876713	3300032064	Soil	IQVKDLTAKCAKAKELGGTIVPGFPFDLTDDRGAIGLVIDPAGHPIGMYSRTSLPKAAK
Ga0318524_106454933	3300032067	Soil	IRKAEGAISAYDGNVYLQVDDIQASCKKAAELGGKVVPGFPFNLSNGGGAIGLVIDPAGHPIGMYSRTPLPEAPAKK
Ga0306924_113476611	3300032076	Soil	VQVSALPANCKKARELGGMIPPGFPFNLPDGTGAIALVADPAGHPVGMFSRTLLPAGPAA
Ga0318518_101812822	3300032090	Soil	RGGIPEYSQVSATEESCKKAKELVGTPVPGFPFDLPDGTGAIGLLSDPAGHPVGMYGRTLLARQKPGSK
Ga0310896_107364072	3300032211	Soil	GVVYVQVSDLSASCKRAAALGGKVVPGFPFNLPDRPGAIALVMDPTGHPIGMYSRTRLPGAK
Ga0306920_1034140912	3300032261	Soil	IQVKDLTASCAKAKELNGQIVPGFPFNLTDDRGAIALVIDPAGHPIGMYSRTPLPKGKS
Ga0335069_114323802	3300032893	Soil	ISPFNGLVYVQVTDIQASCKKAKDLGGLVVPGFPANLPSGTGAIAIVADPAGTPIGLYSRTRVQK
Ga0335083_113682062	3300032954	Soil	ISPYDGVVYVQVKDLPGSCAKAKELGGTVVPGFPFDLKDDRGAIGLVVDPAGHPIGMYSRTALPKAAK
Ga0335084_120387181	3300033004	Soil	VVYVQVTDIQASCKKAKELGGTVAPGFPFNLPDGTGAIGLVLDPSGHPLGMYSRTLLPSATR
Ga0316627_1000333375	3300033482	Soil	VAEGKLSPFNGVVYIQVTDVQAGCRKAKELGGTVVPGFPFNLTDGTGAIGLVVDPAGHPVGLYSRTPLPTAPTPAR
Ga0247829_105051351	3300033550	Soil	VLNIQESCKKAKELGGTLVPGFPFDLPNGTGAIGLVTDPAGHPVGMYSRTPLAPQKPASK
Ga0334915_124358_7_195	3300034132	Hypolithic Biocrust	VTDLLASCAKAKELGGTIPPGFPFNLPDGIGAIALVTDPSGHPIGLYSRTPLPTTAPAGRKE
Ga0364932_0282880_2_226	3300034177	Sediment	GKISPFNGVVYVQVTDIQASCKKAKDLGGTVVPGFPFDLSDGGGAIGLVADPAGHPVGLYSRTALAPKAPPPAK
Ga0364934_0298982_1_177	3300034178	Sediment	DIQASCKKAKELGGTIEAGFPFNLPDGIGAIAVVVDPAGHPVGLYSRTPLAPAPSPAK
Ga0370501_0246121_444_626	3300034195	Untreated Peat Soil	VTDILASCKSAETLGGTVVAGFPFNLPDGIGAVALVVDPSGHPVGMYSRKPLPPTPSPPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076268

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences