Metagenome / Metatranscriptome Family F076241

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076241
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	77 residues
Representative Sequence	MRTIGIAIALCVGALMVSGVTTGARPASVNANPVDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVIKRQ
Number of Associated Samples	97
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.75 %
% of genes near scaffold ends (potentially truncated)	30.51 %
% of genes from short scaffolds (< 2000 bps)	82.20 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.237 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (22.881 % of family members)
Environment Ontology (ENVO)	Unclassified (39.831 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.864 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 17.76% β-sheet: 14.02% Coil/Unstructured: 68.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00069	Pkinase	5.08
PF13360	PQQ_2	3.39
PF13646	HEAT_2	1.69
PF04264	YceI	1.69
PF02518	HATPase_c	1.69
PF12704	MacB_PCD	1.69
PF11453	DUF2950	0.85
PF01433	Peptidase_M1	0.85
PF03965	Penicillinase_R	0.85
PF07676	PD40	0.85
PF07719	TPR_2	0.85
PF00999	Na_H_Exchanger	0.85
PF02687	FtsX	0.85
PF00690	Cation_ATPase_N	0.85
PF00202	Aminotran_3	0.85
PF12697	Abhydrolase_6	0.85
PF07690	MFS_1	0.85
PF00005	ABC_tran	0.85
PF14559	TPR_19	0.85
PF08379	Bact_transglu_N	0.85
PF13180	PDZ_2	0.85
PF05299	Peptidase_M61	0.85
PF01569	PAP2	0.85
PF12680	SnoaL_2	0.85
PF00034	Cytochrom_C	0.85
PF03551	PadR	0.85
PF00795	CN_hydrolase	0.85
PF05547	Peptidase_M6	0.85
PF14252	DUF4347	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	20.34
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	1.69
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.69
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	1.69
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.85
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.85
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.85
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.85
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.85
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.85
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.85
COG3975	Predicted metalloprotease, contains C-terminal PDZ domain	General function prediction only [R]	0.85
COG4412	Bacillopeptidase F, M6 metalloprotease family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.24 %
Unclassified	root	N/A	45.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.24 %
Unclassified	root	N/A	45.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.24 %
Unclassified	root	N/A	45.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	22.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.39 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.63 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.54 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	1.69 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.69 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.54 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	1.69 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	1.69 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.85 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.54 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	1.69 %
unclassified Candidatus Brocadiae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae	1.69 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.85 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.85 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.54 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.69 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	1.69 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.85 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.85 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.85 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.54 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	1.69 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.85 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.85 %
unclassified Lysobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter	0.85 %
Aldersonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia	0.85 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.54 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	1.69 %
Lysobacter sp. S4-A87	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. S4-A87	0.85 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.85 %
unclassified Aldersonia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia	0.85 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.85 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.54 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	1.69 %
Aldersonia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	0.85 %
Lysobacter sp. S4-A87	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. S4-A87	0.85 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.85 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.85 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_105780790	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300004157\|Ga0062590_102787369	Not Available	522	Open in IMG/M
3300004463\|Ga0063356_103176835	Not Available	708	Open in IMG/M
3300004480\|Ga0062592_100034530	All Organisms → cellular organisms → Bacteria → Acidobacteria	2552	Open in IMG/M
3300004643\|Ga0062591_100698050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	917	Open in IMG/M
3300005169\|Ga0066810_10028342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300005294\|Ga0065705_10007934	All Organisms → cellular organisms → Bacteria	4525	Open in IMG/M
3300005294\|Ga0065705_10670170	Not Available	667	Open in IMG/M
3300005295\|Ga0065707_10426395	Not Available	825	Open in IMG/M
3300005295\|Ga0065707_10480763	Not Available	774	Open in IMG/M
3300005331\|Ga0070670_101538613	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300005333\|Ga0070677_10353318	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005334\|Ga0068869_101630200	Not Available	575	Open in IMG/M
3300005336\|Ga0070680_101134187	Not Available	676	Open in IMG/M
3300005338\|Ga0068868_101941550	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005339\|Ga0070660_101565415	Not Available	561	Open in IMG/M
3300005354\|Ga0070675_100000115	All Organisms → cellular organisms → Bacteria	46929	Open in IMG/M
3300005364\|Ga0070673_100267292	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300005438\|Ga0070701_10359224	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300005441\|Ga0070700_101691423	Not Available	543	Open in IMG/M
3300005457\|Ga0070662_101061194	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300005459\|Ga0068867_100984686	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300005459\|Ga0068867_101230226	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005459\|Ga0068867_102039800	Not Available	543	Open in IMG/M
3300005526\|Ga0073909_10661154	Not Available	521	Open in IMG/M
3300005543\|Ga0070672_100036850	All Organisms → cellular organisms → Bacteria	3729	Open in IMG/M
3300005764\|Ga0066903_106884719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300005764\|Ga0066903_109011647	Not Available	505	Open in IMG/M
3300005843\|Ga0068860_101706229	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300006196\|Ga0075422_10061724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1379	Open in IMG/M
3300006196\|Ga0075422_10085025	All Organisms → cellular organisms → Bacteria → Acidobacteria	1195	Open in IMG/M
3300006196\|Ga0075422_10122485	Not Available	1017	Open in IMG/M
3300006196\|Ga0075422_10258021	Not Available	735	Open in IMG/M
3300006844\|Ga0075428_101809925	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300006844\|Ga0075428_102631543	Not Available	514	Open in IMG/M
3300006845\|Ga0075421_100321289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1877	Open in IMG/M
3300006845\|Ga0075421_100451448	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	1536	Open in IMG/M
3300006846\|Ga0075430_100373086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1178	Open in IMG/M
3300006847\|Ga0075431_100029354	All Organisms → cellular organisms → Bacteria	5660	Open in IMG/M
3300006853\|Ga0075420_100145667	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	2080	Open in IMG/M
3300006853\|Ga0075420_100270972	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1474	Open in IMG/M
3300006871\|Ga0075434_102188601	Not Available	557	Open in IMG/M
3300006880\|Ga0075429_100072609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2996	Open in IMG/M
3300006880\|Ga0075429_100182157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1841	Open in IMG/M
3300009094\|Ga0111539_10000411	All Organisms → cellular organisms → Bacteria	53592	Open in IMG/M
3300009094\|Ga0111539_10012756	All Organisms → cellular organisms → Bacteria	10520	Open in IMG/M
3300009094\|Ga0111539_11635940	Not Available	747	Open in IMG/M
3300009147\|Ga0114129_12508285	Not Available	616	Open in IMG/M
3300009148\|Ga0105243_12472122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. S4-A87	558	Open in IMG/M
3300009156\|Ga0111538_10009674	All Organisms → cellular organisms → Bacteria	12846	Open in IMG/M
3300009156\|Ga0111538_11629382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	813	Open in IMG/M
3300009162\|Ga0075423_12221876	Not Available	596	Open in IMG/M
3300009176\|Ga0105242_11697968	Not Available	668	Open in IMG/M
3300009610\|Ga0105340_1034305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1974	Open in IMG/M
3300010154\|Ga0127503_10666116	All Organisms → cellular organisms → Bacteria → Acidobacteria	1787	Open in IMG/M
3300010399\|Ga0134127_10127070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2279	Open in IMG/M
3300010400\|Ga0134122_12967694	Not Available	528	Open in IMG/M
3300010401\|Ga0134121_12911673	Not Available	525	Open in IMG/M
3300011003\|Ga0138514_100082656	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300011423\|Ga0137436_1040807	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300011429\|Ga0137455_1128920	Not Available	750	Open in IMG/M
3300011429\|Ga0137455_1189659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300011442\|Ga0137437_1011501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3053	Open in IMG/M
3300012912\|Ga0157306_10155731	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300012948\|Ga0126375_11231805	Not Available	625	Open in IMG/M
3300013296\|Ga0157374_10223710	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300013308\|Ga0157375_11791394	Not Available	728	Open in IMG/M
3300014326\|Ga0157380_13475469	Not Available	504	Open in IMG/M
3300015371\|Ga0132258_11248999	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300015373\|Ga0132257_101455706	Not Available	873	Open in IMG/M
3300015374\|Ga0132255_105691667	Not Available	527	Open in IMG/M
3300018067\|Ga0184611_1235868	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300018084\|Ga0184629_10084685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1524	Open in IMG/M
3300019996\|Ga0193693_1024723	Not Available	1091	Open in IMG/M
3300021081\|Ga0210379_10071194	Not Available	1416	Open in IMG/M
3300021082\|Ga0210380_10463536	Not Available	580	Open in IMG/M
3300025315\|Ga0207697_10003353	All Organisms → cellular organisms → Bacteria → Acidobacteria	7963	Open in IMG/M
3300025908\|Ga0207643_10136207	Not Available	1464	Open in IMG/M
3300025917\|Ga0207660_11118733	Not Available	642	Open in IMG/M
3300025923\|Ga0207681_10755285	Not Available	811	Open in IMG/M
3300025925\|Ga0207650_11313341	Not Available	616	Open in IMG/M
3300025926\|Ga0207659_10000084	All Organisms → cellular organisms → Bacteria	56518	Open in IMG/M
3300025937\|Ga0207669_11597377	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300025940\|Ga0207691_10077917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	2984	Open in IMG/M
3300025940\|Ga0207691_10454323	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300025942\|Ga0207689_10173041	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300025972\|Ga0207668_12052877	Not Available	515	Open in IMG/M
3300026075\|Ga0207708_10287036	Not Available	1335	Open in IMG/M
3300026089\|Ga0207648_10125591	All Organisms → cellular organisms → Bacteria → Acidobacteria	2257	Open in IMG/M
3300026118\|Ga0207675_100847320	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300027523\|Ga0208890_1041012	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300027880\|Ga0209481_10345291	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300027907\|Ga0207428_10013888	All Organisms → cellular organisms → Bacteria → Acidobacteria	7015	Open in IMG/M
3300027907\|Ga0207428_10017208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6208	Open in IMG/M
3300027907\|Ga0207428_10019364	All Organisms → cellular organisms → Bacteria	5804	Open in IMG/M
3300027909\|Ga0209382_10092961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3542	Open in IMG/M
3300028379\|Ga0268266_11259447	Not Available	715	Open in IMG/M
3300028380\|Ga0268265_11688162	Not Available	639	Open in IMG/M
3300028381\|Ga0268264_12459036	Not Available	526	Open in IMG/M
3300028592\|Ga0247822_11295324	Not Available	611	Open in IMG/M
3300028889\|Ga0247827_11051757	Not Available	556	Open in IMG/M
3300031198\|Ga0307500_10021155	Not Available	1403	Open in IMG/M
3300031199\|Ga0307495_10055233	Not Available	827	Open in IMG/M
3300031226\|Ga0307497_10734056	Not Available	513	Open in IMG/M
3300031538\|Ga0310888_10753100	Not Available	601	Open in IMG/M
3300031538\|Ga0310888_11090048	Not Available	505	Open in IMG/M
3300031547\|Ga0310887_10317834	Not Available	893	Open in IMG/M
3300031547\|Ga0310887_10980112	Not Available	538	Open in IMG/M
3300031562\|Ga0310886_10011190	All Organisms → cellular organisms → Bacteria	3308	Open in IMG/M
3300031847\|Ga0310907_10041320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1734	Open in IMG/M
3300031858\|Ga0310892_10598468	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031892\|Ga0310893_10507913	Not Available	542	Open in IMG/M
3300032012\|Ga0310902_10785496	Not Available	648	Open in IMG/M
3300032122\|Ga0310895_10588989	Not Available	569	Open in IMG/M
3300032179\|Ga0310889_10393602	Not Available	686	Open in IMG/M
3300032180\|Ga0307471_100457602	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300032211\|Ga0310896_10320812	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300034115\|Ga0364945_0251003	Not Available	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.24%
Environmental	Environmental	45.76%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.24%
Terrestrial	Environmental → Terrestrial	37.29%
Aquatic	Environmental → Aquatic	8.47%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.83%
Soil	Environmental → Terrestrial → Soil	35.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.41%
Sediment	Environmental → Aquatic → Sediment	5.93%
Freshwater	Environmental → Aquatic → Freshwater	2.54%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.86%
Loam	Environmental → Terrestrial → Soil → Loam	6.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.54%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	22.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.08%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.24%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	3.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.39%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.54%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.69%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1057807902	3300001431	Soil	MRTIGIAIALCVGALTVSSVTTGARPASVNANPNDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0062590_1027873691	3300004157	Soil	MRRMGVAIALGVGVLLAGVTFVARPSSVSAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0063356_1031768352	3300004463	Arabidopsis Thaliana Rhizosphere	MRRMGVAIPLCVGVLLVSGVTFAAKPNSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0062592_1000345304	3300004480	Soil	MRTIGIAIALCVGALIVSGVTTGARPASVNANADDCNISQSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ*
Ga0062591_1006980503	3300004643	Soil	MVSSVTIGARRAPVNANPVDCSISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ*
Ga0066810_100283421	3300005169	Soil	MRRTGVAIALCVGVLLVSGVTFAARPASVNAPPHDCNISKSFGTFKAVTEESWLLFEDEAGTLRAVDYGCHVQRVFNRQ*
Ga0065705_100079342	3300005294	Switchgrass Rhizosphere	MRRKVVVIALCVGVLLGYGAVSRAKPVGISAQPHDCNVSKAFGTFRAVTAESWLLFEDEGGTLRAVDLSCHLQRVISRQ*
Ga0065705_106701701	3300005294	Switchgrass Rhizosphere	MRMRVAIAVGVGVLFLSGVMPGARTASVNAEPHDCNISKSFGTFKAVTAESWLVFEDETGTLRAIDYG
Ga0065707_104263952	3300005295	Switchgrass Rhizosphere	MRTIGIAIAWCVGAPMVCSVTIGARPAHVNANPVDCNISKSFGTLKAVTAESWLLFEDETGTLRAVDYGCRVKRLIKRQ*
Ga0065707_104807631	3300005295	Switchgrass Rhizosphere	MRTIGIAIGLCVGALTVSSVTTGARPASVNANPNDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQ
Ga0070670_1015386132	3300005331	Switchgrass Rhizosphere	MRTIVIAIASCVGALMVSSVTMGARQAPVNANPVDCSISKSFGTFKAVTAESWLLFEDETGTLR
Ga0070677_103533182	3300005333	Miscanthus Rhizosphere	MRTIGIAIVLCVGALMVSGVTTGARAASVNANSGDCNISKSFGTFKAITAESWLLFEDETGTLRAVDYGCRVQRVFTRQ*
Ga0068869_1016302002	3300005334	Miscanthus Rhizosphere	MRTIGIAIGLCVGALTVSSVTTGARPASVNATPNDCNISKSVGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ*
Ga0070680_1011341871	3300005336	Corn Rhizosphere	MRTIGIAIALCVGALMVSGVTTGARPASVNANADDCNISQSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ*
Ga0068868_1019415502	3300005338	Miscanthus Rhizosphere	IAIVLCVGALMVSGVTTGARAASVNANSGDCNISKSFGTFKAITAESWLLFEDETGTLRAVDYGCRVQRVFTRQ*
Ga0070660_1015654151	3300005339	Corn Rhizosphere	MRSMAVAIPLCVGVLVVSGFTFAAKPNSVNAQPHDCNVSKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRNRQ*
Ga0070675_10000011513	3300005354	Miscanthus Rhizosphere	MRRMGVAIALCVGVLLVSGVTFAARANSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0070673_1002672923	3300005364	Switchgrass Rhizosphere	CFQGGHMRTIGIAIALCVGALMVSAVTTGARPASVNATPNDCNISKSVGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ*
Ga0070701_103592242	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LCVGALIVSGVTTGARPASVNANADDCNISQSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ*
Ga0070700_1016914231	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MQRMGVAIALCVGVLVVSGVTFAAKPDPVNAQPHDCNVSRSFGTFKAVTAESWLLFEDEAGTLRAFDYG
Ga0070662_1010611941	3300005457	Corn Rhizosphere	MRSMAVAIPLCVGVLVVSGITFAAKPNSVNAQPHDCNVSKSFGTFKAVTAESWLLFEDEAGTLRAVDYGCRVQRVINRQ*
Ga0068867_1009846862	3300005459	Miscanthus Rhizosphere	MRRMAVAIPLCVGVLVVSGVTFAAKPNSLNAQPHDCNVSRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ*
Ga0068867_1012302262	3300005459	Miscanthus Rhizosphere	MRTIGIAIALCVGALMVSGVTTGARAASVNANSGDCNISKSFGTFKAITAESWLLFEDETGTLRAVDYGCRVQRVFTRQ*
Ga0068867_1020398001	3300005459	Miscanthus Rhizosphere	MRRMGVAIPLCVGVLLVSGVTFAAKPNSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLR
Ga0073909_106611542	3300005526	Surface Soil	MRMTGIAIALCVGVLMVSGVTTGARPASVNANPDDCNISKSFGTFKAVTSESWLLFEDETGTLRAVDYGCHVQRVFKRQ*
Ga0070672_1000368505	3300005543	Miscanthus Rhizosphere	MRTIGIAIALCVGALMVSAVTTGARPASVNATPNDCNISKSVGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ*
Ga0066903_1068847191	3300005764	Tropical Forest Soil	MRRMSIAITFCVGVLLLSGITSGQPRLRERAANDCNISKSFGRFKAVTSESWLLFEDETGTLRAVD
Ga0066903_1090116471	3300005764	Tropical Forest Soil	MRKIGVTVALFVVVLFVSSVISGAIPASVKAQSHDCNISKSFGTFKAVTAESWLLFEDEAGTVRAVDYGCHLQRVFNRQSTP*
Ga0068860_1017062291	3300005843	Switchgrass Rhizosphere	MRTIGIAIALCVGALIVSGVTTGARPASVNANADDCNISQSFGTFKAVTAESWLLFEDETGTL
Ga0075422_100617243	3300006196	Populus Rhizosphere	MRTIGMAIALCGGALMVSGVTTGARPAALNPNPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVD
Ga0075422_100850252	3300006196	Populus Rhizosphere	MSSMAVAIPLCVGVLLVSGVTFAAKSVNAQPRDCNVSKSFGTFKAVTAESWLLFEDETGTLRA
Ga0075422_101224852	3300006196	Populus Rhizosphere	MRTIGIAIGLCVGALTVSSVTTGARPASVNANPNDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ*
Ga0075422_102580213	3300006196	Populus Rhizosphere	MRRMGVAIALCVGVLLVTGVTFAARPNSVNAPPHDDCNISRSFGPFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0075428_1018099252	3300006844	Populus Rhizosphere	MSSMAVAIPLCVGVLLVSGVTFAAKSVNAQPRDCNVSKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0075428_1026315431	3300006844	Populus Rhizosphere	MRTIGIAIALCVGALMLSGVSTGARPASLNANPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVIKRQ*
Ga0075421_1003212891	3300006845	Populus Rhizosphere	MRRMGVAIALCVGVLLVTGVTFAARPNSVNAPPHDDCNISRSFGPFKAVTAESWLLFEDETGTLRAVD
Ga0075421_1004514483	3300006845	Populus Rhizosphere	MRRMVVAIPLCVGVLLVSGVTFAAKPNSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRH*
Ga0075430_1003730861	3300006846	Populus Rhizosphere	MRRMGVAIALCVGVLLVSGVTFAARPNSVNAPPHDDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0075431_1000293541	3300006847	Populus Rhizosphere	MRRMGVAIALCVGVLLVSGVTFAARRDSVNAQPHDCNIPRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0075420_1001456672	3300006853	Populus Rhizosphere	MRRMGVAIALCVGVLLVTGVTFAARPNSVNAPPHDDCNISRSFGPFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRH*
Ga0075420_1002709722	3300006853	Populus Rhizosphere	MRTIGIAIGLCVGALTVSSVTTGARPASVNANPNDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVIKRQ*
Ga0075434_1021886011	3300006871	Populus Rhizosphere	MAGSLKQQARKETFDRPQAQGGHMRRMVVAIPLCVGVLLVSGVTVAAKPNSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0075429_1000726092	3300006880	Populus Rhizosphere	MRRMGVAIALCVGVLLVSGVTFAARPNSVNAPPHDDCNISRSFGPFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0075429_1001821573	3300006880	Populus Rhizosphere	MRTIGIAIALCVGALMLSGVSTGARPASLNANPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAV
Ga0111539_100004119	3300009094	Populus Rhizosphere	MRTIGMAIALCGGALMVSGVTTGAGPAALNPNPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQKVIKRQ*
Ga0111539_1001275612	3300009094	Populus Rhizosphere	MRRMVVAIPLCVGALVVSGVTFAARPNSVNAQPRDCNVSRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0111539_116359402	3300009094	Populus Rhizosphere	MRTIGIAIALCVGALMVSGVTTGARPASVNANPDDCNISKSFGAFKAVTAESWLLFEDETGTLRAVDYGCHVQRVFKRQ*
Ga0114129_125082852	3300009147	Populus Rhizosphere	MRRMGVAIALCVGVLLVSGVTFAARPDSVNAQPHDCNIPRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRMISRQ*
Ga0105243_124721221	3300009148	Miscanthus Rhizosphere	MRTIGIAIVLCVGALMVSGVTTGARPASVNGNPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVIKRQ*
Ga0111538_100096744	3300009156	Populus Rhizosphere	MRTIGMAIALCGGALMVSGVTTAARPAALNPNPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQKVIKRQ*
Ga0111538_116293823	3300009156	Populus Rhizosphere	MRRMGVAIALCVGVLLVSGVTFAAKPNSVNAQPHDCNISRSLGMFRAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0075423_122218761	3300009162	Populus Rhizosphere	AIALCVGVLLVTGVTFAARPNSVNAPPHDDCNISRSFGPFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0105242_116979682	3300009176	Miscanthus Rhizosphere	MRTIGIAIALCVGALMVSGASTGARPASVNANSDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCHVQRVFKRG*
Ga0105340_10343053	3300009610	Soil	MRTIGIAVALCVGALMVSGVTTVAGPASVHANPDDCTISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFQRQ*
Ga0127503_106661162	3300010154	Soil	MRSAAIAIVALCVGVLLVSRVTLGARPDSVNAQPHDCSISKSYGTFKAVTAESWLVFEDETGTLRAVDYGCRLQRVFSRQ*
Ga0134127_101270704	3300010399	Terrestrial Soil	MRRMAVAIPLCVGVLVVSGVTFAAKPNSLNAQPHDCNVSRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0134122_129676941	3300010400	Terrestrial Soil	MRTIGIAIALCVGALMVSGVTTGARPASVNANPVDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVIKRQ*
Ga0134121_129116731	3300010401	Terrestrial Soil	MRTTGIAIALCVGALMVSGVTTGARPASVNANPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0138514_1000826561	3300011003	Soil	MRTMVVPIALCLGVLLVSGVTSRARPASLNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVIKRQ*
Ga0137436_10408073	3300011423	Soil	MGVAIALCVGVLLVSGVTYGARPAAVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFNRQ*
Ga0137455_11289202	3300011429	Soil	MRTIGIAIALCVGALMVSGVTTVAGPASVHANPDDCTISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFQRQ*
Ga0137455_11896591	3300011429	Soil	MGVAIALCVGVLLVSGVTYGARPAAVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCHVQRVFNRQ*
Ga0137437_10115015	3300011442	Soil	MGVAIALCVGVLLVSGVTYGARPAAVNAQPHDCNISRSFGTFKAVTAESWLLFEDETG
Ga0157306_101557311	3300012912	Soil	MAGSLKQLARKETFDRPQAQGGHMRRMGVAIPLCVGVLLVSGVTFAAKPNSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGC
Ga0126375_112318051	3300012948	Tropical Forest Soil	MRRWVAVIALCVGVLLVYGATSVARPAAVSTQPHECNVPRAFGTFKAVSAESWLLFEDEGGTLRALDYGCHIQRVISRQ*
Ga0157374_102237103	3300013296	Miscanthus Rhizosphere	MGVAIALCVGVLLVSGVTFAARANSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0157375_117913941	3300013308	Miscanthus Rhizosphere	MRTIGIAIALCVGALMVSAVTTGARPASVNATPNDCNISKSVGTFKAVTAESWLLFEDETGTLRALDYGC
Ga0157380_134754691	3300014326	Switchgrass Rhizosphere	MTTMAGSLKQARNETFDRPQAQGGHMRRMAVAIPLCVGVLVVSGITFAAKPNSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ*
Ga0132258_112489992	3300015371	Arabidopsis Rhizosphere	MRRMGVAVALCVGVLLVSGATFVARATVNAQQTDCNISRSFGTFKAVTAESWLLFEDAGGTLRAVDYGCHVQRVINRQ*
Ga0132257_1014557063	3300015373	Arabidopsis Rhizosphere	MRIGVAIALGVGVLFLSGLMPGARTASVSAEPHDCNISKSFGTFKAVTAESWLVFEDETGTLRTVDYGCRVQRVFNRQ*
Ga0132255_1056916672	3300015374	Arabidopsis Rhizosphere	MRTIGIAIALCVGALMVSSVTTGARSAPVNASPVDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCHVKRLIKRQ*
Ga0184611_12358681	3300018067	Groundwater Sediment	MRTIAITIALCVGALVVSGATTGARLASVNANPDDCNISKSFGTFRAVTAESWLLFEDETGTLRAVDYGCRVQRVFTRQ
Ga0184629_100846854	3300018084	Groundwater Sediment	GVAIALCVGVLLASGVTFAARPPSVNAQPHDCNISRSFGTFKAVTDESWLLFEDETGTLRAVDYGCRVQRVFNRQ
Ga0193693_10247232	3300019996	Soil	MRTTGIAIALCVGVLMVSGVTTGARPASVNANPDDCNISKSFGTFKAVTSESWLLFEDETGTLRAVDYGCHVQRVFKRQ
Ga0210379_100711943	3300021081	Groundwater Sediment	MRRMGVAIALCVGVLLASGVTFAARPPSVNAQPHDCNISRSFGTFKAVTDESWLLFEDETGTLRAVDYGCRVQRVFNRQ
Ga0210380_104635362	3300021082	Groundwater Sediment	MRTIAITIALCVGALVVSGATTGARLASVNANPDDCNISKSFGTFRAVTAESWLLFEDETGTLRAVDYGCRVQRVFNRQ
Ga0207697_100033531	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	HMRTIGIAIALCVGALMVSAVTTGARPASVNATPNDCNISKSVGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0207643_101362072	3300025908	Miscanthus Rhizosphere	MRTIGIAIVLCVGALMVSGVTTGARAASVNANSGDCNISKSFGTFKAVTAESWLLFEDETGTLRAEDYGCRVQRVINRQ
Ga0207660_111187331	3300025917	Corn Rhizosphere	MRRMAVAIPLCVGVLVVSGVTFAAKPNSLNAQPHDCNVSRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0207681_107552851	3300025923	Switchgrass Rhizosphere	MRTIGIAIVLCVGALMVSGVTTGARAASVNANSGDCNISKSFGTFKAITAESWLLFEDETGTLRAVDYGCRVQRVF
Ga0207650_113133411	3300025925	Switchgrass Rhizosphere	MRTIGIAIVLCVGALMVSGVTTGARAASVNANSGDCNISKSFGTFKAITAESWLLFEDETGTLRAVDYGCRVKRLIKRQ
Ga0207659_1000008410	3300025926	Miscanthus Rhizosphere	MRRMGVAIALCVGVLLVSGVTFAARANSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ
Ga0207669_115973771	3300025937	Miscanthus Rhizosphere	MRTIGIAIALCVGALMVSGASTGARPASVNANSDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFNRQ
Ga0207691_100779173	3300025940	Miscanthus Rhizosphere	MRTIGIAIALCVGALMVSAVTTGARPASVNATPNDCNISKSVGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0207691_104543231	3300025940	Miscanthus Rhizosphere	MRTIGIAIVLCVGALMVSGVTTGARAASVNANSGDYNISKSFGTFKAITAESWLLFEDETGTLRAVDYGCRVQRVFTRQ
Ga0207689_101730412	3300025942	Miscanthus Rhizosphere	MRTIGIAIGLCVGALTVSSVTTGARPASVNANPNDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0207668_120528772	3300025972	Switchgrass Rhizosphere	MRRMAVAIPLCVGVLVVSGVTFAAKPNSVNAQPHDCNVSRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ
Ga0207708_102870361	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRTIGIAIVLCVGALMVSGVTTGARAASVNANSGDCNISKSFGTFKAITAESWLLFEDETGTLRAVDYGCR
Ga0207648_101255912	3300026089	Miscanthus Rhizosphere	MRRMGVAIPLCVGVLLVSGVTFAAKPNSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0207675_1008473202	3300026118	Switchgrass Rhizosphere	MRSMAVAIPLCVGVLLVSGVTFAAKPNSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ
Ga0208890_10410121	3300027523	Soil	MRRTGVAIALCVGVLLVSGVTFAARPASVNAQPHDCNVSKSFGTFKAVTEESWLLFEDEAGTLRAVDYGCHVQRVFNRQ
Ga0209481_103452911	3300027880	Populus Rhizosphere	MRRMGVAIALCVGVLLVTGVTFAARPNSVNAPPHDDCNISRSFGPFKAVTAESWLLFEDETGTLRAVDYGC
Ga0207428_100138884	3300027907	Populus Rhizosphere	MRTIGMAIALCGGALMVSGVTTGARPAALNPNPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQKVIKRQ
Ga0207428_100172083	3300027907	Populus Rhizosphere	MRRMGVAIALCVGVLLVTGVTFAARPNSVNAPPHDDCNISRSFGPFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ
Ga0207428_100193643	3300027907	Populus Rhizosphere	MRRMVVAIPLCVGALVVSGVTFAARPNSVNAQPRDCNVSRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ
Ga0209382_100929611	3300027909	Populus Rhizosphere	MRTIGIAIALCVGALMLSGVSTGARPASLNANPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0268266_112594472	3300028379	Switchgrass Rhizosphere	MRTIGIAIVLCVGALMVSGVTTGARAASVNANSGDCNISKSFGTFKAITAESWLLFEDETGTLRAVDY
Ga0268265_116881622	3300028380	Switchgrass Rhizosphere	MRTIGIAIALCVGALIVSGVTTGARPASVNANADDCNISQSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0268264_124590362	3300028381	Switchgrass Rhizosphere	MRTIGIAIVLCVGALMVSGVTTGARAASVNANSGDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0247822_112953241	3300028592	Soil	MRTIGIAIALCVGALMVSAVTTGARPASVNANPNDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0247827_110517571	3300028889	Soil	MRTIGIAIGLCVGALTVSSVTTGARPASVNANPNDCNISKSFGTFKAVTAESWLLFEDETGTL
Ga0307500_100211553	3300031198	Soil	MRTIGIAIALCVGTLTVSSVTTGARPASVNANPADCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0307495_100552332	3300031199	Soil	MRTTGIAIALCVGVLMVSGVTTGARPASVNANPDDCNISKSFGTFKTVTAESWLLFEDETSTLRAVDYGCHV
Ga0307497_107340561	3300031226	Soil	MRTIWIAIVLCVGALMLSGVTTGARPASVNAKPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0310888_107531002	3300031538	Soil	MRRMGVAIALGVGVLLAGVTFVARPSSVSAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ
Ga0310888_110900481	3300031538	Soil	MRRMGVAIPLCVGVLLVSGVTFAAKSNSVNAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ
Ga0310887_103178341	3300031547	Soil	MRRMGVAIALCVGVLLAGVTFAARPSSVSAQPHDCNISRSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVINRQ
Ga0310887_109801122	3300031547	Soil	MRTIGIAIGLCVGALTVSSVTTGARPASVNANPNDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFK
Ga0310886_100111901	3300031562	Soil	MRTIGIAIAGALMVSAVTTGARPASVNATSNDCNISKSVGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0310907_100413201	3300031847	Soil	MRTIGIAIAGALMVSAVTTGARPASVNATPNDCNISKSVGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0310892_105984681	3300031858	Soil	MRTIGIAIALCVGALIVSGVTTGARPASVNANPDDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCHVQRV
Ga0310893_105079131	3300031892	Soil	IAVALCVGALMVSSVTTRARPAPVNASPVDCNISKAFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVIKRQ
Ga0310902_107854962	3300032012	Soil	MRTIGIAIALCVGALIVSSVTIGARPAPVNANPVDCTIAKSFGTLKAVTAESWLLFEDETGTLRAVDYGCSVKRLIKRQ
Ga0310895_105889891	3300032122	Soil	LSATAALGGHMRTIGIAIALCVGALMVSGVTTGARPASVNANADDCNISQSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0310889_103936021	3300032179	Soil	MRTIGIAIGLCVGALTVSSVTTGARPASVNANPNDCNISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCR
Ga0307471_1004576021	3300032180	Hardwood Forest Soil	MGVAIALCAGVLLVSGVTFAARPASVNAQPRDCNISKSFGTFKAVTAESWLLFEDEAGTLRAVDYG
Ga0310896_103208122	3300032211	Soil	MRTTGIAIALCVGALMVSAVTTGARPASVNATSNDCNISKSVGTFKAVTAESWLLFEDETGTLRAVDYGCRVQRVFKRQ
Ga0364945_0251003_82_321	3300034115	Sediment	MRTIGIAIALCVGALMVSGVTTGARPASVNANPDDCSISKSFGTFKAVTAESWLLFEDETGTLRAVDYGCRVKRVFKRQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076241

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences