Metagenome / Metatranscriptome Family F076226

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076226
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	100 residues
Representative Sequence	MDARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVEGKRNLINEGALVLHLSGGRKWGFLASIDMGSGVYNIVGTSTAGLVPD
Number of Associated Samples	44
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.17 %
% of genes near scaffold ends (potentially truncated)	22.88 %
% of genes from short scaffolds (< 2000 bps)	91.53 %
Associated GOLD sequencing projects	40
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (32.203 % of family members)
Environment Ontology (ENVO)	Unclassified (32.203 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.15% β-sheet: 51.18% Coil/Unstructured: 45.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF07484	Collar	21.19
PF00582	Usp	4.24
PF13189	Cytidylate_kin2	2.54
PF10091	Glycoamylase	0.85
PF00316	FBPase	0.85
PF13185	GAF_2	0.85
PF02901	PFL-like	0.85
PF03733	YccF	0.85
PF02559	CarD_CdnL_TRCF	0.85
PF12146	Hydrolase_4	0.85
PF07228	SpoIIE	0.85
PF00365	PFK	0.85
PF00005	ABC_tran	0.85
PF01814	Hemerythrin	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0158	Fructose-1,6-bisphosphatase	Carbohydrate transport and metabolism [G]	0.85
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.85
COG1882	Pyruvate-formate lyase	Energy production and conversion [C]	0.85
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.69 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.69 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.69 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.69 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.69 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.85 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.85 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.85 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.69 %
Verrucomicrobia bacterium ADurb.Bin018	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	0.85 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.85 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.85 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.85 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.69 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.85 %
Roseiflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae	0.85 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.85 %
Plesiomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Plesiomonas	0.85 %
Verrucomicrobia bacterium ADurb.Bin018	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.69 %
Roseiflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae	0.85 %
Plesiomonas shigelloides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Plesiomonas → Plesiomonas shigelloides	0.85 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.85 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.85 %
Verrucomicrobia bacterium ADurb.Bin018	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.69 %
Kouleothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix	0.85 %
Plesiomonas shigelloides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Plesiomonas → Plesiomonas shigelloides	0.85 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.85 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.85 %
Verrucomicrobia bacterium ADurb.Bin018	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.69 %
Kouleothrix aurantiaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	0.85 %
Plesiomonas shigelloides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Plesiomonas → Plesiomonas shigelloides	0.85 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.85 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.85 %
Verrucomicrobia bacterium ADurb.Bin018	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006224\|Ga0079037_100935333	Not Available	856	Open in IMG/M
3300006224\|Ga0079037_101535858	Not Available	665	Open in IMG/M
3300009091\|Ga0102851_10811437	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300009091\|Ga0102851_10966090	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300009091\|Ga0102851_12416536	Not Available	600	Open in IMG/M
3300009111\|Ga0115026_10513229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	894	Open in IMG/M
3300009111\|Ga0115026_10513541	Not Available	893	Open in IMG/M
3300009111\|Ga0115026_10542983	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300009131\|Ga0115027_10285610	Not Available	1102	Open in IMG/M
3300009167\|Ga0113563_10579069	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300009167\|Ga0113563_12306893	Not Available	647	Open in IMG/M
3300009167\|Ga0113563_12383395	Not Available	637	Open in IMG/M
3300012931\|Ga0153915_10573887	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300012931\|Ga0153915_10687556	Not Available	1181	Open in IMG/M
3300012931\|Ga0153915_11124781	Not Available	916	Open in IMG/M
3300012931\|Ga0153915_11413856	Not Available	813	Open in IMG/M
3300012931\|Ga0153915_11830114	Not Available	710	Open in IMG/M
3300012931\|Ga0153915_12005021	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	677	Open in IMG/M
3300012964\|Ga0153916_10559213	Not Available	1218	Open in IMG/M
3300012964\|Ga0153916_11124040	Not Available	865	Open in IMG/M
3300012964\|Ga0153916_11606008	Not Available	725	Open in IMG/M
3300012964\|Ga0153916_12237787	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300013078\|Ga0153914_1049962	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300013078\|Ga0153914_1078381	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300013078\|Ga0153914_1138931	Not Available	516	Open in IMG/M
3300013078\|Ga0153914_1177932	All Organisms → cellular organisms → Bacteria	2521	Open in IMG/M
3300013078\|Ga0153914_1197664	Not Available	676	Open in IMG/M
3300013078\|Ga0153914_1241663	Not Available	523	Open in IMG/M
3300013080\|Ga0153913_1001472	Not Available	676	Open in IMG/M
3300013080\|Ga0153913_1279158	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	695	Open in IMG/M
3300013080\|Ga0153913_1436339	Not Available	855	Open in IMG/M
3300013080\|Ga0153913_1515979	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300013080\|Ga0153913_1533846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1169	Open in IMG/M
3300018055\|Ga0184616_10129093	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300018070\|Ga0184631_10088067	Not Available	1196	Open in IMG/M
3300022185\|Ga0079039_1109037	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300022185\|Ga0079039_1217752	Not Available	1120	Open in IMG/M
3300022185\|Ga0079039_1270036	Not Available	1098	Open in IMG/M
3300022185\|Ga0079039_1337353	Not Available	741	Open in IMG/M
3300022185\|Ga0079039_1419855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin018	829	Open in IMG/M
3300022185\|Ga0079039_1547429	Not Available	876	Open in IMG/M
3300022185\|Ga0079039_1551336	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300022185\|Ga0079039_1574736	Not Available	683	Open in IMG/M
3300022650\|Ga0236339_1262773	Not Available	531	Open in IMG/M
3300024056\|Ga0124853_1252925	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300027740\|Ga0214474_1032631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2026	Open in IMG/M
3300027877\|Ga0209293_10413634	Not Available	699	Open in IMG/M
3300027877\|Ga0209293_10429028	Not Available	687	Open in IMG/M
3300027900\|Ga0209253_10260267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1362	Open in IMG/M
3300027900\|Ga0209253_10522998	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300030613\|Ga0299915_10224194	All Organisms → cellular organisms → Bacteria → Proteobacteria	1317	Open in IMG/M
3300030613\|Ga0299915_10322830	Not Available	1053	Open in IMG/M
3300030613\|Ga0299915_10490578	Not Available	808	Open in IMG/M
3300030613\|Ga0299915_10692332	Not Available	646	Open in IMG/M
3300031707\|Ga0315291_10185476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2136	Open in IMG/M
3300031707\|Ga0315291_10753761	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300031707\|Ga0315291_11618853	Not Available	503	Open in IMG/M
3300031949\|Ga0214473_11512933	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300031999\|Ga0315274_10688636	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300032020\|Ga0315296_10367532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	794	Open in IMG/M
3300032046\|Ga0315289_10154913	All Organisms → cellular organisms → Bacteria	2579	Open in IMG/M
3300032070\|Ga0315279_10010728	All Organisms → cellular organisms → Bacteria	10721	Open in IMG/M
3300032070\|Ga0315279_10756452	Not Available	579	Open in IMG/M
3300032118\|Ga0315277_10431391	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300032118\|Ga0315277_11787458	Not Available	511	Open in IMG/M
3300032156\|Ga0315295_10261315	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300032156\|Ga0315295_10533430	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300032173\|Ga0315268_10013568	All Organisms → cellular organisms → Bacteria	8261	Open in IMG/M
3300032173\|Ga0315268_10057314	All Organisms → cellular organisms → Bacteria	3679	Open in IMG/M
3300032173\|Ga0315268_10072007	All Organisms → cellular organisms → Bacteria	3256	Open in IMG/M
3300032173\|Ga0315268_10705280	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300032397\|Ga0315287_11717760	Not Available	702	Open in IMG/M
3300032401\|Ga0315275_10569907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1266	Open in IMG/M
3300032401\|Ga0315275_11213032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	821	Open in IMG/M
3300032401\|Ga0315275_11393404	Not Available	756	Open in IMG/M
3300033413\|Ga0316603_12192711	Not Available	521	Open in IMG/M
3300033414\|Ga0316619_10257115	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300033414\|Ga0316619_10912955	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300033414\|Ga0316619_11368378	Not Available	631	Open in IMG/M
3300033414\|Ga0316619_11834631	Not Available	550	Open in IMG/M
3300033416\|Ga0316622_100468176	Not Available	1430	Open in IMG/M
3300033416\|Ga0316622_100963531	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300033416\|Ga0316622_101491632	Not Available	790	Open in IMG/M
3300033416\|Ga0316622_101952551	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300033480\|Ga0316620_10014657	All Organisms → cellular organisms → Bacteria	4436	Open in IMG/M
3300033480\|Ga0316620_10134634	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300033480\|Ga0316620_10250033	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300033480\|Ga0316620_10368510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1286	Open in IMG/M
3300033480\|Ga0316620_10626242	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300033480\|Ga0316620_10700723	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300033480\|Ga0316620_12563763	Not Available	507	Open in IMG/M
3300033482\|Ga0316627_102404605	Not Available	554	Open in IMG/M
3300033483\|Ga0316629_11754120	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300033485\|Ga0316626_11504478	Not Available	606	Open in IMG/M
3300033486\|Ga0316624_11036439	Not Available	741	Open in IMG/M
3300033486\|Ga0316624_11275850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Plesiomonas → Plesiomonas shigelloides	670	Open in IMG/M
3300033487\|Ga0316630_10168110	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300033487\|Ga0316630_10825080	Not Available	798	Open in IMG/M
3300033487\|Ga0316630_11103754	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300033488\|Ga0316621_10924996	Not Available	646	Open in IMG/M
3300033489\|Ga0299912_10091784	All Organisms → cellular organisms → Bacteria	2661	Open in IMG/M
3300033489\|Ga0299912_10198783	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300033489\|Ga0299912_10420720	Not Available	1091	Open in IMG/M
3300033489\|Ga0299912_11176106	Not Available	560	Open in IMG/M
3300033489\|Ga0299912_11306034	Not Available	523	Open in IMG/M
3300033493\|Ga0316631_10455981	Not Available	534	Open in IMG/M
3300033493\|Ga0316631_10470634	Not Available	527	Open in IMG/M
3300033513\|Ga0316628_100533242	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300033513\|Ga0316628_101088601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1062	Open in IMG/M
3300033513\|Ga0316628_101192182	Not Available	1014	Open in IMG/M
3300033513\|Ga0316628_101466647	Not Available	909	Open in IMG/M
3300033513\|Ga0316628_102990482	Not Available	618	Open in IMG/M
3300033521\|Ga0316616_101380842	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300033521\|Ga0316616_101864628	Not Available	792	Open in IMG/M
3300033521\|Ga0316616_104614759	Not Available	518	Open in IMG/M
3300033521\|Ga0316616_104835695	Not Available	507	Open in IMG/M
3300033557\|Ga0316617_100410985	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300033557\|Ga0316617_101678631	Not Available	646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.47%
Terrestrial	Environmental → Terrestrial	41.53%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	56.78%
Soil	Environmental → Terrestrial → Soil	41.53%
Sediment	Environmental → Aquatic → Sediment	1.69%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	32.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	32.20%
Lake	Environmental → Aquatic → Freshwater → Lake	17.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	9.32%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.08%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	32.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	32.20%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	16.95%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	5.93%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.39%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	32.20%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	23.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	16.95%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	8.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	5.93%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.39%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.69%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013078	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013080	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022650	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W3	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0079037_1009353331	3300006224	Freshwater Wetlands	MDARIGARLWDRGKVYKGDERIAEVVYALQVVQETIDGVEQQNITGQVRVIEGKRDLINEGTLILQLAGGRKWEFLASSDMGSGVYSVMDARKSSLASH*
Ga0079037_1015358582	3300006224	Freshwater Wetlands	QAGPVTPMMEEKMDARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVEGKRNLINEGALVLHLAGGRKCEFLASIDMGSGVYNIVGTSKAGLVSD*
Ga0102851_108114372	3300009091	Freshwater Wetlands	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVDGVERQDFTGQVRVVDGKRNLINEGALVLQLSGGRKWGFLASMDMGSGVYNIVGTSGAGLAPN*
Ga0102851_109660902	3300009091	Freshwater Wetlands	MATRQRGPSGDMNVPGRPGKTPMMEKKMDAKIGTRLWDRGKVYKDDEHIAEVVYALQVVQETVGGAEQEDITGQVRVVEGKRNLVNEGALILQLGGGRKWEFFASLDMGSGVYNVMGTSGAGLVSN*
Ga0102851_124165361	3300009091	Freshwater Wetlands	MMEEKMDARIGTRLWDRGKVYKDDERIAEVVYALQVVPETVDGVERQDITGQVRVVEGKRNLIDEGALVLQLSGGRKWEFLASIAMGSGVYKVMGTSGAGLAPN*
Ga0115026_105132292	3300009111	Wetland	MMEEKMDTNISRRLWDRGKVYKDDERIAEVVYALQVVQGTVGSVEQQDFTGQVRVVEGKRNLVNEGALVLHLSGGRKWGFLASIDMGSGVYNIVGTRAGLVPN*
Ga0115026_105135411	3300009111	Wetland	MATRQRGPSGDMNVPGRPGKTPMMEKKMDAKIGTRLWDRGKVYKDDEHIAEVVYALQVVQETVGGAEQEDITGQVRVVEGKRNLVNEGALILQLGGGRKWEFFASLDMGSGVYNVMGTSGAGLVAN*
Ga0115026_105429832	3300009111	Wetland	VRPTARTRQAGQVTPMMEGKMDARIGTRLWDRGMVYKDDESIAQVVYALQVVQGTVDGVERQDITGQVRVVDGKWNLINEGALVLQLSGGRKWEFLASLDMGSGVYNIVGTSRAGLVPN*
Ga0115027_102856102	3300009131	Wetland	MMEEKMDARIGTRLWDRGKVYKDDERIADVVYALQIVQGTVDGVEQQDITGQVRVVEGKRNLINEGALVLHLAGGRKCEFLASIDMGSGVYNIVGTSRAGLVSD*
Ga0113563_105790692	3300009167	Freshwater Wetlands	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVDGVERQDFTGQVRVVDGKRNLINEGALVLQLSGGRKWEFLASIAMGSGVYKVMGASGASLVLN*
Ga0113563_123068932	3300009167	Freshwater Wetlands	MDEKISKRIWDRGKVYKDGERIAEVVYALQIVQEIVGGVAQEDITGQVRVVEGRRNLVDEGTLILQLGGGRKWEFLASIAMGSGVYTVIGASR
Ga0113563_123833952	3300009167	Freshwater Wetlands	MMEEKMDARIGTRLWDRGKVYKDDEPIAQVVYALQVVQETVDGVERQDITGQVRVVEGKRNLINEGALVLHLAGGRKCEFLASIDMGSGVYNIVGTSKAGLVSD*
Ga0153915_105738872	3300012931	Freshwater Wetlands	MDAGIGTRLWDRGKVYKNDERIAEVVYALQVVQETIGGMEQQSITGQVRVVEGKRDLINAGTLILQLGGGRKWEFFASMDMGSGVYNVMDARKLGLASH*
Ga0153915_106875562	3300012931	Freshwater Wetlands	MDARIGARLWDRGKVYKGDERIAEVVYALQVVQETIDGVEQQNITGQVRVIEGKRDLINEGTLILQLGGGRKWEFFASIDMGSGVYNVMDARKLGLASH*
Ga0153915_111247811	3300012931	Freshwater Wetlands	MVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVEGNRNLLNEGALVLKLSGGRKWEFLASIAMGPGVYNVIGASRAGLVLN*
Ga0153915_114138562	3300012931	Freshwater Wetlands	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVDGVERQDITGQVRVVDGRRNLINEGALVLQLSGGRKWEFLASIAMGSGVYKVMGTSGAGLVPN*
Ga0153915_118301141	3300012931	Freshwater Wetlands	MATRQHGPSGGTNAPGRPGNINDGGEKMDTSISTRLWDRGKVYKDDERIADVVYALQVVQGTVGGVEQQDITGQVRVVDGKRNLVNEGTLILRLGGGRKWEFF
Ga0153915_120050212	3300012931	Freshwater Wetlands	MDTSISTRLWDRGKVYKDDERIADVVYALQVVQGTVDGVEQQDITGQVRVVEGKRNLVNEGALVLQLGGGRKWEFFASIDRGSGVYNIVGTSRASLVSD*
Ga0153916_105592132	3300012964	Freshwater Wetlands	MDARIGARLWDRGKVYKGDERIAEVVYALQVVQETIDGVEQQNITGQVRVIEGKRDLINEGTLILQLGGGHKWEFFASIDMGSGVYNVLDARKLGLASH*
Ga0153916_111240402	3300012964	Freshwater Wetlands	MMDEKMEARLNTWLWDQGKVYKGDECIAQVVYALQIVHGTVGGVVQQDITGQVTVVEGKRNLINEGALVLHLCDGKWEFLASIDMGSGVYNIVGTNRAGLVSD*
Ga0153916_116060081	3300012964	Freshwater Wetlands	MDAKIGTQLWDRGKVYKGDERIAEVVYALQVVQETIGGVEQQSITGQVRVVEGKRDLINAGTLILQLGGGRKWEFFASMDMGSGVYNVMDARKLPSLQ*
Ga0153916_122377871	3300012964	Freshwater Wetlands	DTSISTRLWDRGKVYKYDERIAEVVYALQVVQETVDGVERQDFTGQVRVVEGKRNLAHEGALVLHLNGGRKWGFLASIDMGSGVYNIVGTSRAGLVTD*
Ga0153914_10499623	3300013078	Freshwater Wetlands	MEEKMEARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDFTGQVRVVEGKRNLAHEGALVLHLNGGRKWGFLASIDMGSGVYNIVGTSRAGLVSA*
Ga0153914_10783812	3300013078	Freshwater Wetlands	MMEEKMVVRIGTRLWDRGIVYKDDERIAEVVYALQVVQETVDGVERQDFTGQVRVVDGKRNLINEGALVLHLNGGRKWEFLASLDMGSGVYNIVSASRAGLAPN*
Ga0153914_11389312	3300013078	Freshwater Wetlands	MMEEKMDARIGTRLWDRGKVYKGDERIAEVVYALQVVQGTMGDVEQQDITGQVRVVEGKRNLVDEGTLTLQLSGGRKWEFFASIAMGSSV*
Ga0153914_11779322	3300013078	Freshwater Wetlands	MMEEKMDARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVDGKRNLVNEGTLVLHLNGGRKWEFLASIDMGSGVYNIVGASRAGLVPN*
Ga0153914_11976642	3300013078	Freshwater Wetlands	MMEGKMDTSISRRLWDRGKVYKNDEHIAEVVYALQVVQGAVDGAQRQDITGQVRVVEGKRNLINEGALVLQLSGGHKWEFLASMDMGSGVYNVTGTSGAGLVPN*
Ga0153914_12416631	3300013078	Freshwater Wetlands	MMEEKMDTSNSTRLWDRGKVYKDDERIAEVVYALQVVQGTVGGVEQEDITGQVRVVEGKRNLINEGALVLQLSGGRKWGFLASIDRGSGVYNIVGTSGAGLVPN*
Ga0153913_10014721	3300013080	Freshwater Wetlands	MMEGKMDTSISTRLWDRGKVYKDDERIADVVYALQVVQGTVGGVEQQDITGQVRVVEGKRNLINEGALVLHLSGGRKWGFLASLDRGSGVYNVTGTSGAGLVPN*
Ga0153913_12791582	3300013080	Freshwater Wetlands	MMEGKMDARIGTRLWDRGMVYKDDERIAEVVYALQVVQETVDGVERQDFTGQVRVVDGKRNLINEGALVLHLNGGRKWEFLASLDMGSGVYNIVSASRAGLAPN*
Ga0153913_14363392	3300013080	Freshwater Wetlands	MDTSISTRLWDRGKVYKDDERIADVVYALQVVQGTVGGVEQQDITGQVRVVEGKRNLVNEGALVLHLSGGRKWGFLASIDMGSGVYNIVGTSTAGLVAD*
Ga0153913_15159792	3300013080	Freshwater Wetlands	MMEEKMEARIGTRLWDRGKVYKGDECIAEVVYALQIGQGTVGGVEQQDITGQVRVVDGKRNLVEEGALILQLGGGRKWEFLASIDMGSGVYKVMGTSRAGLVPN*
Ga0153913_15338462	3300013080	Freshwater Wetlands	MMDEKKEARINTRLWDRGKVYKGDECIAQVVYALQIVQGIVGGAERQDITGQVRVVEGKRNLINEGALVLHLNGGRKWEFLASIDMGSGVYNIVGTNRAGLVSD*
Ga0184616_101290931	3300018055	Groundwater Sediment	MEARIGTRLWDRGKVYKDDERIAEVVYALHVAQETVDGVERQDITGQVRVVEGKRNLINEGALVLHLSGGRKWGFLASIDMGSGVYNIVGTSTAGLVSA
Ga0184631_100880672	3300018070	Groundwater Sediment	MDAKVGTRLWDRGKVYKGDERIAEVVYALEVIQKTVGGTEQQEITGQVRVVEGTRNLINEGVLTLQLGGGRKWEFLASLDMGSGVYNVLGASKTSLVSI
Ga0079039_11090372	3300022185	Freshwater Wetlands	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVGGVEQQNITGQVRVVEGKRNLINEGTLVLHLSGGRKWGFLASIDKGSGVYNVKGTSGAGLVPN
Ga0079039_12177522	3300022185	Freshwater Wetlands	MDARIGKRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQNITGQVRVVEGKRDLINEGALVLHLNGGRKWEFLASIDMGSGVYSIVGANGAGLVPN
Ga0079039_12700362	3300022185	Freshwater Wetlands	MDARIGTRLWDRGMVYKDDERIAEVVYALQVVQETVDSVERQDFTGQVRVVEGKRNLIHEGALVLHLNGGRKWEFLASIDMGSGVYNIVGTNRAGLVSD
Ga0079039_13373531	3300022185	Freshwater Wetlands	MDAKIGTRLWDRGKVYKDDEHIAEVVYALQVVQETVGGAEQEDITGQVRVVEGKRNLVNEGALILQLGGGRKWEFFASLDMGSGVYNVMGTSGAGLVAS
Ga0079039_14198552	3300022185	Freshwater Wetlands	ARINTRLWDRGKVYKGDECIAQVVYALQIVQGIVGGAERQDITGQVRVVEGKRNLINEGALVLHLNGGRKWEFLASIDMGSGVYNIVGTNRAGLVSD
Ga0079039_15474291	3300022185	Freshwater Wetlands	RLWDRGKVFKDEERIAEVVYALQVVQETVDGVERQDVTGQVRVVEGKRDLVQEGALVLQLNGGRKWAFLASLDMGSGVYNVIGTSSAGLVSN
Ga0079039_15513362	3300022185	Freshwater Wetlands	MDARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVDGKRNLVNEGTLVLHLNGGRKWEFLASIDMGSGVYSIVGTSTAGLAPN
Ga0079039_15747362	3300022185	Freshwater Wetlands	MDARIGTRLWDRGKVYKDDERIAEVVYALHVAQETVEGVEQQDITGQVRVVEGKRNLINEGALVLHLSGGRKWGFLASIDRGSGVY
Ga0236339_12627731	3300022650	Freshwater	MDTSISTRLWDRGKVYKDDERIAEVVYALQIVPGTVGGVEQQDITGQVRVVEGKRNLINEGALVLQLSGGRKWGFLASNDMGSGVYNVMGTSGAGLVPN
Ga0124853_12529252	3300024056	Freshwater Wetlands	MEARIGTRLWDRGRVYKDDERIAEVVYALQVVQETVDGVERQGFTGQVRVVEGKRNLIHEGALVLHLNGGRKWGFLASIDMGSGVYNIVGTNRAGLVSD
Ga0214474_10326312	3300027740	Soil	KVYKDDERIAEVVYALQVVQGTVDGVERQDITGQVRVVDGKRNLINEGALVLQLSGGRKWEFLASIAMGSGVYKVMGTSGAGLVPN
Ga0209293_104136341	3300027877	Wetland	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVGSVEQQDFTGQVRVVEGKRNLVNEGALVLHLSGGRKWGFLASIDMGSGVYNIVGTRAGLVPN
Ga0209293_104290281	3300027877	Wetland	MDAKIGTRLWDRGKVYKDDEHIAEVVYALQVVQETVGGAEQEDITGQVRVVEGKRNLVNEGALILQLGGGRKWEFFASLDMGSGVYNVMGTSGAGLVAN
Ga0209253_102602672	3300027900	Freshwater Lake Sediment	MDTSISTRLWDRGKVYKDDERIADVVYALQVVQGTVGGVEQQDITGQVRVVEGKRNLLNEGTLILQLGGGRKWEFLASSDRGSGVYNVTGTSGAGLVPN
Ga0209253_105229982	3300027900	Freshwater Lake Sediment	MEARIGTRLWDRGKVYKGDERIAEVVYALQVVQETVDGVERQDITGQVRVVEGKRNLIDEGALVLHLNGGRKWGFLASMDMGSGVYNIVSTSTAGLVSD
Ga0299915_102241943	3300030613	Soil	AGPVTPMMEEKMDARIGTRLWDRGKVYKDDERIAEVVYALHVVQETVDGVERQDITGQVRVVDGKRNLINEGALVLHLNGGRKWEFLASIDMGSGVYNIVGASRAGLVSD
Ga0299915_103228302	3300030613	Soil	MDTSISTRLWDRGKVYKDDERIAEVVYALQAVQGTVGGVEQQDITGQVRVVEGKRNLVNEGTLILQLGGGRKWEFFASIDRGSGVYNVMGTSGAGLVPN
Ga0299915_104905781	3300030613	Soil	MDAKINTRLWDRGKVYKGDERIAEVVYALEIIQKMVGGTEQQEVTGQVRVVEGKRDLINEGTLTLQLGGGRKWEFLASLDMGSGVYNVLGASKTSLVSI
Ga0299915_106923321	3300030613	Soil	VTPMMEEKMEARISTRLWDRGKVYKGDEHIAEVVYALQIGQGTVGGVEQQDITGQVRVVEGRRNLANEGNLTLRLSGGRKWEFLASIAMGSGVYNVIGTSRAGLVLN
Ga0315291_101854762	3300031707	Sediment	MEARINTWLWDRGRVYKGDECIAEVVYALQIVQGTVGGVAQQDITGQVRVVEGKRNLINEGTLALQLSGGKWKFLASIDMGSGVYNVMGASGAGLAPN
Ga0315291_107537612	3300031707	Sediment	MDARIGTRLWDRGKVYKGDEHIAEVVYALQIGQRTVGGVEQQDITGQVRVVEGKRNLVEEGALILQLGGGRKWEFLALIAMGSGVYKVTGLAPN
Ga0315291_116188531	3300031707	Sediment	MDARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVEGKQNLINEGALVLQLSGGRKWEFLASLDMGSGVYKVMGTSGAGLAPN
Ga0214473_115129332	3300031949	Soil	MEARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVEGSRNLINEGALVLHLNGGRKWEFSASIDMGSGVYNIVGTSRAGLVSD
Ga0315274_106886362	3300031999	Sediment	MDARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVEGKRNLINEGALVLQLSGGRKWEFLASIAMGSGVYKVMGTSGAGLAPN
Ga0315296_103675322	3300032020	Sediment	KDDERIAEVVYALQVVQETVDGVERQDITGQVRVVEGKRNLINEGALVLQLSGGRKWEFLASIAMGSGVYKVMGTSGAGLAPN
Ga0315289_101549131	3300032046	Sediment	MEARINTWLWDRGRVYKGDECIAEVVYALQIVQGTVGGVAQQDITGQVRVVEGKRNLINEGTLALQLSGGKWKFLASIDMGSGVYNVMGASRAGLAPN
Ga0315279_100107286	3300032070	Sediment	MDTSISTRLWDRGKVYKDDERIAEVVYALQFVQETVDGVERQDITGQLRVVDGKRNLINEGALVLQLSGGRKWGFLASIDMGSGVYNIVGTSGAGLVPN
Ga0315279_107564522	3300032070	Sediment	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVDGVERQDITGQVRVVDGKRNLINEGALVLQLSGGRKWEFLASIDMGSGVYNVMGTSGAGPVPN
Ga0315277_104313911	3300032118	Sediment	MDARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVEGKRNLINEGALVLHLSGGRKWGFLASIDMGSGVYNIVGTSTAGLVPD
Ga0315277_117874581	3300032118	Sediment	MDAKIGTRLWDRGKVYKGDERIAEVVYALQVVQGTMGDVEQQDITGQVRVVEGKRNLVDEGTLTLQLSGGRKWEFFASIAMGSGVYNVIGASRAGLVPN
Ga0315295_102613153	3300032156	Sediment	MDARIGTRLWDRGKVYKGDERIAEVVYALQVVQETIGGVEQQSITGQVRVVEGKRNLINEGTLILQLGGGRKWEFFASIDMGSGVYNVMDARRLGLASH
Ga0315295_105334302	3300032156	Sediment	MDTSICTRLWDRGKVYKDDERIADVVYALQVVQGTVGGVEQQDITGQVRVVEGKRNLVNEGALILQLGGGRTWEFFASLDMGSGVYNVTGTSGAGLAPN
Ga0315268_100135683	3300032173	Sediment	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVGGVEQQDITGQIRVVDGKRNLANEGNLTLRLSGGRKWEFLASIAMGSGVYNVIGANRAGLVPN
Ga0315268_100573147	3300032173	Sediment	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDFTGQVRVVEGKRNLINEGALVLHLTGGRKWEFLASIDMGSGVYNIVGTSRAGLVAN
Ga0315268_100720073	3300032173	Sediment	MDARTSTRLWDRGKVYKGDERIAEVVYALEVVQDRVGGIEHQEITGSVRVVEGKRDLMSEGTLILNLAGGRKWEFFASVDQGSGVYSVMDASRASLAPN
Ga0315268_107052803	3300032173	Sediment	MDARIGTRLWDRGKVYKDDERIAEVVYALHVVQGTVGGVEQQDITGQVRVVEGKRNLANEGNLTLRLCGGRKWEFLASVAMGSGVYQVMGASGTGLVSN
Ga0315287_117177601	3300032397	Sediment	TRQHGPSGGTNAPGRPSDANDGGKMDARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVEGKQNLINEGALVLQLSGGRKWEFLASLDMGSGVYKVMGTSGAGLAPN
Ga0315275_105699074	3300032401	Sediment	MDTSISTRLWDRGKVYKDDERIADVVYALQVVQGTVGGVEQQDITGQVRVVEGKRNLVNEGTLILQLGGGRKWEFFASIDRGSGVYNVTGTSGAGLVPN
Ga0315275_112130322	3300032401	Sediment	MDAKIGTRLWDRGKVYKGDERIAEVVYALEVIQNTVGGIEQQEITGQVRVVEGTRNLINEGVLTLQLGGGRKWEFLASRDMGSGVYNVLGASNASLINDLGATQLG
Ga0315275_113934042	3300032401	Sediment	MMEEKMEARIGTRLWDRGKVYKDDERIADVVYALQVVQETVDGVERQDFAGQVRVVEGKRNLINEGALVLHLSGGRKWGFLASIDMGSGVYNIVGTSTAGLVSA
Ga0316603_121927111	3300033413	Soil	MEARIGTRLWDRGKVYKDDERIAEVVYALQVVQGTVDGVERQDFTGQVRVVEGKRNLINEGALVLHLNGGRKWGFLASIDMGSGVYNIVGTS
Ga0316619_102571152	3300033414	Soil	MDTSISTRLWDRGKVYKDDEHIAEVVYALQVVQETVGGAEQEDITGQVRVVEGKRNLVNEGALILQLGGGRKWEFFASLDMGSGVYNVMGTSGAGLVAN
Ga0316619_109129552	3300033414	Soil	MEARIGTRLWDRGKVYKDDERIADVVYALQVVQGTVGGVEQQDITGQVRVVEGKRNLVNEGALVLQLSGGRKWEFLASIDRGSGVYNIVGTSRAGLVTD
Ga0316619_113683782	3300033414	Soil	GTRLWDRGKVYKDDERIAEVVYALQIVQETVDGVERQDVTGQVRVVEGNRNLTNEGALVLHLNGGRKWEFLASIDMGSRVYKVIGASRAGLALN
Ga0316619_118346312	3300033414	Soil	MMEEKMDARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVDGKRNLVNEGALVLHLNGGRKWEFLASIDMGSGVYSIVGTSTAGLVPN
Ga0316622_1004681763	3300033416	Soil	MDERIGTRLWDRGKVYKDDERIAEVVYALQVVPETVDGVERQDITGQVRVVEGKRNLIDEGALVLQLSGGRKWEFLASIAMGSGVYKVMGASGASLVLN
Ga0316622_1009635312	3300033416	Soil	MDARIGTRLWDRGMVYKDDERIAEVVYALQVVQETVDSVERQDFTGQVRVVEGKRNLIHEGALVLHLNGGRKWEFLASIDMGSGVYNIVGTSRAGLVSA
Ga0316622_1014916321	3300033416	Soil	MDARIGARLWDRGKVYKGDERIAEVVYALQVVQETIGGVEQQSITGQVRVVEGKRDLAHAGTLVLQLGGGRKWEFFASIDMGSGVYNVLDARKLGLASH
Ga0316622_1019525512	3300033416	Soil	MDARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDITGQVRVVDGKRNLVNEGTLVLHLNGGRKWEFLASIDMGSGVYNIVGASTAGLVPN
Ga0316620_100146574	3300033480	Soil	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVGGVEQQDITGQVRVVDGKRNLINEGALVLQLSGGRKWEFLASIAMGSGVYKVMGTSGAGLVPN
Ga0316620_101346343	3300033480	Soil	MDTSISRRLWDRGKVYKDDERIAEVVYALQVVQGTVDGVERQDITGQVRVVDGRRNLINEGALVLQLSGGHKWEFLASMDMGSGVYNVTGTSGAGLVPN
Ga0316620_102500333	3300033480	Soil	MEARIGTRIWDRGKVYKDDERIADVVYALQVVQGTVGGVEQQDITGQVRVVEGKRNLVNEGALVLQLSGGRKWEFLASIDRGSGVYNIVGTSRAGLVTD
Ga0316620_103685102	3300033480	Soil	MSAKIATRLWDRGKVYKGDEYIASVVYALEITQEIVDGVEQQDTTGQIRVVEGKRNLGEEGTLIMQLSDGRIWEFLVSIDMGSSVYKVLGANRTGPMSKSLS
Ga0316620_106262422	3300033480	Soil	MDAKIGTRLWDRGKVYKDDEHIAEVVYALQVVQETVGGAEQEDITGQVRVVEGKRNLVNEGALILQLGGGRKWEFFASLDMGSGVYNVMGTSGAGLVSN
Ga0316620_107007231	3300033480	Soil	MDARIGARLWDRGKVYKGDERIAEVVYALQVVQETIDGVEQQNITGQVRVIEGKRDLINEGTLILQLGGGRKWEFFASIDMGSGVYNVLDARKLGLASH
Ga0316620_125637631	3300033480	Soil	KIGTRLWDRGKVYKGDERIAEVVYALQVEQETIDGVEQESITGQVRVVEGKRNLIHEGTLILQLSGGRKWEFFASLDMGSGVYNVMDARRSGLASH
Ga0316627_1024046052	3300033482	Soil	MEARLNTWLWDQGKVYKGDECIANVSYALQVVLETIGGVVQQDITGQVRVVEGKRNLINEGALVLHLCGGKWEFLASTDMGSGVYNIVGTNRASLVSD
Ga0316629_117541201	3300033483	Soil	AGPVTPMMEGKMDARIGTRLWDRGKVYKDDESIAQVVYALQVVQETVDGVERQDITGQVRVVEGKRNLINEGALVLHLNGGRKWGFLASIDMGSGVYNIVGTSTASPVPA
Ga0316626_115044781	3300033485	Soil	RTRQAGPVTPMMEEKMEARIGTRLWDRGKVYKDDERIAEVVYALQVVQETVDGVERQDFTGQVRVVEGKRNLINEGALVLHLSGGRKWEFLVSIDMGSGVYNIVGTSKAGLVSD
Ga0316624_110364393	3300033486	Soil	MDARIGTRLWDRGKVYKDDEPIAEVVYALQVVPETVDGVEHQDITGQVRVVEGKRNLINEGALVLHLSGGRKCEFLASIDMGSGVYNIVGTSRAGLVSD
Ga0316624_112758501	3300033486	Soil	GNTNDGGKKMDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVGGVERQDITGQVRVVDGKRNLINEGALVLQLSGGHKWEFLASMDMGSGVYNVTGTSGAGLVPN
Ga0316630_101681102	3300033487	Soil	MDARIGTRLWDRGKVYKDDERIAEVVYALQVVQGTVGGVEQQDITGQVRVVEGKRNLANEGNLTLRLSGGRKWEFLASIAMGSGVYQVMGTSGAGLVPN
Ga0316630_108250802	3300033487	Soil	MEARIGTRLWDRGKVYKDDEPIAQVVYALQVVQETVDGVERQDITGQVRVVEGNRNLTNEGALVLHLNGGRKWEFLASIDMGSRVYKVIGASRAGLALN
Ga0316630_111037541	3300033487	Soil	MDEKISKRIWDRGKVYKDGERIAEVVYALQIVQEIVGGVAQEDITGQVRVVEGRRNLVDEGTLILQLGGGRKWEFLASIAMGSGVYTVIGASRAGLVPN
Ga0316621_109249961	3300033488	Soil	MDARIGTRLWDRGKVYKDDERIAEVVYALQVVQGTVEGVERQDFTGQVRVVEGKRNLINEGALVLHLSGGRKWEFLASIAMGSGVYKVMGTSGAGLAPN
Ga0299912_100917843	3300033489	Soil	MDARIGTRLWDRGKVYKDDERIAEVVYALHVVQETVDGVERQDITGQVRVVDGKRNLINEGALVLHLNGGRKWEFLASIDMGSGVYNIVGASRAGLVSD
Ga0299912_101987833	3300033489	Soil	MDAKIGTRLWDRGKVYKGDERIAEVVYALQVVQGTTGDVEQQDITGQVRVVEGKRNLVDEGTLTLQLSGGRKWEFFASIAMGSGVYNVIGASRAGLVPN
Ga0299912_104207202	3300033489	Soil	MDTSIGTRLWDRGKVYKDDERIAEVVYALQVVQGTVGGVERQDITGQVRVVEGKRNLINEGALVLQLSGGRKWGFLASLDMGSGVYNVMGTSGADLVPNVSSQ
Ga0299912_111761061	3300033489	Soil	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVDGVERQDFTGQVRVVDGKRNLINEGALVLQLSGGRKWGFLASMDMGSGVYNIVGTSGAGLAPN
Ga0299912_113060341	3300033489	Soil	PGNTNDGGKKMDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVDGVERQDITGQVRVVDGKRNLINEGALVLQLSGGRKWEFLASIAMGSGVYKVMGTSGAGLVPN
Ga0316631_104559811	3300033493	Soil	MDTSISTRLWDRGKVYKDDERIAEVVYALQVVQGTVGGVEQQDITGQVRVVDGKRNLINEGALVLQLSGGRKWEFLASIAMGPGV
Ga0316631_104706341	3300033493	Soil	MMEEKMDARIGTRLWDRGMVYKDDERIAEVVYALQVMQETVDGMERQDFTGQVRVVEGKRNLIHEGALVLHLNGGRKWGFLASIDMGSGVYNIVGTNRAGLVSD
Ga0316628_1005332423	3300033513	Soil	MDTSISRRLWDRGKVYKNDEHIAEVVYALQVVQGAVDGAQRQDITGQVRVVEGKRNLINEGALVLQLSGGHKWEFLASMDMGSGVYNVTGTSGAGLVPN
Ga0316628_1010886012	3300033513	Soil	MEAGIGTRLWDRGKVYKGDECIAKVVYALQVVQGTAGSVEQQDITGQVRVVEGKRNLISEGALVLHLNGGRKWEFLASIDMGSGVYNVMGASGAGLAPNSSWGHTLLSKKGE
Ga0316628_1011921821	3300033513	Soil	MGAGIGTRLWDRGKVYKGDECIAEVVYALQVVQETIGGMEQQSITGQVRVVEGKRNLINAGTLILQLGGGRKWEFFASIDMGSGVYNVLDARKLGLASH
Ga0316628_1014666472	3300033513	Soil	MDARIGKRLWDRGKVYKGDEPIAEVVYALQVVQETIGGVEQQSITGQVRVVEGKRDLINEGTLILQLGGGRKWEFLASLDMGSSVYNVMDAPRLGALDLRTPSAPG
Ga0316628_1029904821	3300033513	Soil	EGKMDTSISRRLWDRGKVYKNDERIAEVVYALQVVQGTVDGVQRQDITGQVRVVDGKRNLINEGALVLQLSGGHKWEFLASMDMGSGVYNVTGTSGAGLVLN
Ga0316616_1013808423	3300033521	Soil	MDTSISTRLWDRGKVYKDDERIADVVYALQVVQGTVGGVERQDITGQVRVVEGKRNLVNEGTLILQLGGGRKWEFLASIAMGSGVYTVIGASRAGLVPN
Ga0316616_1018646282	3300033521	Soil	MDARIGTRLWDRGKVYKDDERIAEVVYALQIVQETVDGVERQDVTGQVRVVEGNRNLTNEGALVLHLNGGRKWEFLASIDMGSRVYKVIGASRAGLALN
Ga0316616_1046147592	3300033521	Soil	MMEEKMEARIGTRLWDRGRVYKDDERIAEVVYALQVVQETVDGVERQGFTGQVRVVEGKRNLIHEGALVLHLNGGRKWGFLASIDMGSGVYNIVGTNRAVLVSD
Ga0316616_1048356952	3300033521	Soil	MDTGISTRLWDRGKVYKDDERIAEVVYALQVVQGTVGGVERQDITGQVRVVEGKRNLTNEGALVLQLSGGRKWEFLASLDMGSGVY
Ga0316617_1004109852	3300033557	Soil	MDARIGTRLWDRGMVYKDDERIAEVVYALQVVQETVDGMERQDFTGQVRVVEGKRNLINEGALVLHLNGGRKWEFLASIDMGSGVYNIVGTSRASLVSA
Ga0316617_1016786312	3300033557	Soil	LWDRGMVYKDDERIAEVVYALQVVQETVDSVERQDFTGQVRVVEGKRNLIHEGALVLHLNGGRKWGFLASIDMGSGVYNIVGTNRAGLVSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076226

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences