Metagenome Family F076209

Basic Information
Family ID	F076209
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	63 residues
Representative Sequence	VLGVASGAVAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR
Number of Associated Samples	94
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.34 %
% of genes near scaffold ends (potentially truncated)	26.27 %
% of genes from short scaffolds (< 2000 bps)	81.36 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Bacteria (66.949 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (23.729 % of family members)
Environment Ontology (ENVO)	Unclassified (31.356 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.542 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.11% β-sheet: 0.00% Coil/Unstructured: 37.89%
Feature Viewer

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Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF08241	Methyltransf_11	18.64
PF01527	HTH_Tnp_1	8.47
PF13414	TPR_11	2.54
PF02417	Chromate_transp	2.54
PF01314	AFOR_C	1.69
PF13683	rve_3	1.69
PF04542	Sigma70_r2	1.69
PF00440	TetR_N	1.69
PF13276	HTH_21	1.69
PF12802	MarR_2	1.69
PF00702	Hydrolase	0.85
PF05494	MlaC	0.85
PF03466	LysR_substrate	0.85
PF04116	FA_hydroxylase	0.85
PF07690	MFS_1	0.85
PF07883	Cupin_2	0.85
PF09851	SHOCT	0.85
PF00753	Lactamase_B	0.85
PF11716	MDMPI_N	0.85
PF00872	Transposase_mut	0.85
PF09335	SNARE_assoc	0.85
PF02371	Transposase_20	0.85
PF00892	EamA	0.85
PF00578	AhpC-TSA	0.85
PF01106	NifU	0.85
PF13458	Peripla_BP_6	0.85
PF07617	DUF1579	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	2.54
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.69
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.69
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.69
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	1.69
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.69
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.85
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.85
COG0694	Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.85
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.85
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.85
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.85
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.95 %
Unclassified	root	N/A	33.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.95 %
Unclassified	root	N/A	33.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.95 %
Unclassified	root	N/A	33.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.05 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.05 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.05 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Thalassospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae	0.85 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.05 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Magnetovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Magnetovibrio	0.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.05 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Magnetovibrio blakemorei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Magnetovibrio → Magnetovibrio blakemorei	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16640364	All Organisms → cellular organisms → Bacteria	8279	Open in IMG/M
2088090015\|GPICI_9024343	All Organisms → cellular organisms → Bacteria → Proteobacteria	1986	Open in IMG/M
2170459008\|GA8OVOZ01AH0TB	Not Available	512	Open in IMG/M
2228664021\|ICCgaii200_c0963203	Not Available	606	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0823934	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14334595	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101551241	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300000787\|JGI11643J11755_11373045	Not Available	527	Open in IMG/M
3300000953\|JGI11615J12901_10977372	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300004114\|Ga0062593_100531791	Not Available	1100	Open in IMG/M
3300004114\|Ga0062593_102135976	Not Available	626	Open in IMG/M
3300004156\|Ga0062589_101050101	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300004157\|Ga0062590_100199997	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300004157\|Ga0062590_101403466	Not Available	695	Open in IMG/M
3300004463\|Ga0063356_101291892	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300004463\|Ga0063356_105517754	Not Available	543	Open in IMG/M
3300005293\|Ga0065715_10854568	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005328\|Ga0070676_10133104	All Organisms → cellular organisms → Bacteria → Proteobacteria	1574	Open in IMG/M
3300005336\|Ga0070680_100151434	Not Available	1947	Open in IMG/M
3300005364\|Ga0070673_101118531	Not Available	736	Open in IMG/M
3300005438\|Ga0070701_10515058	All Organisms → cellular organisms → Bacteria → Proteobacteria	779	Open in IMG/M
3300005444\|Ga0070694_100118499	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300005445\|Ga0070708_100007668	All Organisms → cellular organisms → Bacteria	8647	Open in IMG/M
3300005445\|Ga0070708_100130116	All Organisms → cellular organisms → Bacteria	2329	Open in IMG/M
3300005467\|Ga0070706_100098030	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300005467\|Ga0070706_100695450	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300005468\|Ga0070707_100174319	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300005468\|Ga0070707_100282009	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300005468\|Ga0070707_100410023	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300005468\|Ga0070707_100706572	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005471\|Ga0070698_100014137	All Organisms → cellular organisms → Bacteria	8439	Open in IMG/M
3300005471\|Ga0070698_100069494	All Organisms → cellular organisms → Bacteria	3535	Open in IMG/M
3300005471\|Ga0070698_101529564	Not Available	619	Open in IMG/M
3300005518\|Ga0070699_100076499	All Organisms → cellular organisms → Bacteria	2913	Open in IMG/M
3300005536\|Ga0070697_100042237	All Organisms → cellular organisms → Bacteria	3689	Open in IMG/M
3300005536\|Ga0070697_100235110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1564	Open in IMG/M
3300005545\|Ga0070695_100230558	Not Available	1338	Open in IMG/M
3300005545\|Ga0070695_100279259	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300005549\|Ga0070704_100244046	Not Available	1471	Open in IMG/M
3300005840\|Ga0068870_11059269	Not Available	581	Open in IMG/M
3300005842\|Ga0068858_101504881	Not Available	664	Open in IMG/M
3300005878\|Ga0075297_1000105	All Organisms → cellular organisms → Bacteria → Proteobacteria	3263	Open in IMG/M
3300006237\|Ga0097621_100338810	Not Available	1335	Open in IMG/M
3300006845\|Ga0075421_100492451	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300006854\|Ga0075425_103089581	Not Available	508	Open in IMG/M
3300006903\|Ga0075426_10443485	Not Available	961	Open in IMG/M
3300006904\|Ga0075424_101005983	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300006914\|Ga0075436_100278263	Not Available	1196	Open in IMG/M
3300007076\|Ga0075435_100705716	Not Available	877	Open in IMG/M
3300007265\|Ga0099794_10239478	Not Available	934	Open in IMG/M
3300009089\|Ga0099828_11339430	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300009162\|Ga0075423_12435547	Not Available	571	Open in IMG/M
3300009551\|Ga0105238_12700008	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300009553\|Ga0105249_13169152	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300009814\|Ga0105082_1104474	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300010373\|Ga0134128_10347990	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300010403\|Ga0134123_11508346	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300011269\|Ga0137392_10078206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2562	Open in IMG/M
3300011419\|Ga0137446_1156869	Not Available	549	Open in IMG/M
3300012226\|Ga0137447_1090709	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012360\|Ga0137375_10650131	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300012931\|Ga0153915_12193504	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300013100\|Ga0157373_10140656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1697	Open in IMG/M
3300013105\|Ga0157369_10018457	All Organisms → cellular organisms → Bacteria → Proteobacteria	7821	Open in IMG/M
3300014884\|Ga0180104_1100539	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300015371\|Ga0132258_12210882	Not Available	1381	Open in IMG/M
3300015372\|Ga0132256_101148785	Not Available	891	Open in IMG/M
3300017997\|Ga0184610_1022742	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300017997\|Ga0184610_1036265	All Organisms → cellular organisms → Bacteria → Proteobacteria	1407	Open in IMG/M
3300017997\|Ga0184610_1276661	Not Available	555	Open in IMG/M
3300018031\|Ga0184634_10501475	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300018052\|Ga0184638_1205571	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300018053\|Ga0184626_10079723	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300018054\|Ga0184621_10245258	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300018056\|Ga0184623_10054628	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300018056\|Ga0184623_10216245	Not Available	880	Open in IMG/M
3300018059\|Ga0184615_10648428	Not Available	543	Open in IMG/M
3300018063\|Ga0184637_10147835	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300018063\|Ga0184637_10754771	Not Available	524	Open in IMG/M
3300018075\|Ga0184632_10426022	Not Available	553	Open in IMG/M
3300018075\|Ga0184632_10433870	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300018079\|Ga0184627_10478460	Not Available	645	Open in IMG/M
3300018082\|Ga0184639_10495488	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018084\|Ga0184629_10161858	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300019360\|Ga0187894_10001176	All Organisms → cellular organisms → Bacteria	34386	Open in IMG/M
3300020003\|Ga0193739_1007095	All Organisms → cellular organisms → Bacteria	2990	Open in IMG/M
3300021073\|Ga0210378_10031377	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300021090\|Ga0210377_10128117	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300025324\|Ga0209640_10004831	All Organisms → cellular organisms → Bacteria	11782	Open in IMG/M
3300025908\|Ga0207643_10790223	Not Available	615	Open in IMG/M
3300025910\|Ga0207684_10040268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3962	Open in IMG/M
3300025910\|Ga0207684_10391775	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1194	Open in IMG/M
3300025910\|Ga0207684_10424708	Not Available	1142	Open in IMG/M
3300025910\|Ga0207684_11703953	Not Available	508	Open in IMG/M
3300025912\|Ga0207707_10201682	Not Available	1734	Open in IMG/M
3300025920\|Ga0207649_10567586	Not Available	870	Open in IMG/M
3300025922\|Ga0207646_10070887	All Organisms → cellular organisms → Bacteria	3113	Open in IMG/M
3300025922\|Ga0207646_10087244	All Organisms → cellular organisms → Bacteria	2792	Open in IMG/M
3300025922\|Ga0207646_10175214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Magnetovibrio → Magnetovibrio blakemorei	1937	Open in IMG/M
3300025922\|Ga0207646_10364997	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300025922\|Ga0207646_11022572	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300026067\|Ga0207678_10320589	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300026377\|Ga0257171_1024139	Not Available	1032	Open in IMG/M
3300026535\|Ga0256867_10016964	All Organisms → cellular organisms → Bacteria	3138	Open in IMG/M
3300027650\|Ga0256866_1036638	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300027875\|Ga0209283_10639173	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300027876\|Ga0209974_10405928	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300027909\|Ga0209382_10451644	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300027952\|Ga0209889_1096000	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300027961\|Ga0209853_1154077	Not Available	554	Open in IMG/M
3300028380\|Ga0268265_10580802	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300030006\|Ga0299907_10160819	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300031229\|Ga0299913_10221089	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300031949\|Ga0214473_11564003	Not Available	662	Open in IMG/M
3300033233\|Ga0334722_10567456	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300033412\|Ga0310810_10006441	All Organisms → cellular organisms → Bacteria	13273	Open in IMG/M
3300033513\|Ga0316628_101731108	Not Available	832	Open in IMG/M
3300033813\|Ga0364928_0148155	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.12%
Host-Associated	Host-Associated	22.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.78%
Plants	Host-Associated → Plants	22.88%
Aquatic	Environmental → Aquatic	20.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.08%
Sediment	Environmental → Aquatic → Sediment	16.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.63%
Freshwater	Environmental → Aquatic → Freshwater	3.39%
Cave	Environmental → Terrestrial → Cave	0.85%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	26.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	16.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.24%
Sand	Environmental → Terrestrial → Soil → Sand	2.54%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.69%
Lake	Environmental → Aquatic → Freshwater → Lake	0.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	25.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	16.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.24%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.69%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.85%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	23.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	14.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.24%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.24%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.54%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.54%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.54%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.85%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2170459008	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005878	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02345740	2088090014	Soil	VLGVASGALAARVADLQIVLVPVSILSLVVAHYLAHRKGAGGRGQRIALWIATPVSLALWTVPHLMR
GPICI_02368860	2088090015	Soil	MAALQIVLIPVSIASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV
F48_04390520	2170459008	Grass Soil	MLLTAALGVLGVASGALAARVAEWQVVLIPMSVVSLALAYYFAYRRGVGGYRQRVLLWIATPVSVALWVLPSLLR
ICCgaii200_09632032	2228664021	Soil	ALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR
ICChiseqgaiiDRAFT_08239343	3300000033	Soil	VASGALAARVADLQIVLVPVSILSLVVAHYLAHRKGAGGRGQRIALWIATPVSLALWTVPHLMR*
ICChiseqgaiiFebDRAFT_143345952	3300000363	Soil	VLGVASGALAARVAEWQVVLIPMSIVSLALAHYFAYRRGVGGHRQRVLLWIATPVSLTLWVLPYLIR*
INPhiseqgaiiFebDRAFT_1015512414	3300000364	Soil	LALGHYFAHRQGGGGRRQRVMLWIATPASLALWVVPWMLR*
JGI11643J11755_113730451	3300000787	Soil	ARMAALQIVLIPVSVASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
JGI11615J12901_109773723	3300000953	Soil	VAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0062593_1005317912	3300004114	Soil	MAALQIVLIPVSVASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0062593_1021359762	3300004114	Soil	MAALQIVLIPVSIASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0062589_1010501012	3300004156	Soil	MLLTATLGVLGVASGALAARVAEWQVVLIPMSIVSLALAHYFAYRRGVGGHRQRVLLWIATPVSLTLWVLPYLIR*
Ga0062590_1001999971	3300004157	Soil	VLGVASGAVAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0062590_1014034661	3300004157	Soil	ASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0063356_1012918922	3300004463	Arabidopsis Thaliana Rhizosphere	LILVSIGSLALGHYFAYRQGAWGRQRVMLWIATPASLALWVVQWLFR*
Ga0063356_1055177542	3300004463	Arabidopsis Thaliana Rhizosphere	VASGAIAARMAALQIVLIPVSVASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0065715_108545681	3300005293	Miscanthus Rhizosphere	LQIVLIPVSIASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0070676_101331042	3300005328	Miscanthus Rhizosphere	MAALQIVLIPVSVASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0070680_1001514342	3300005336	Corn Rhizosphere	MAALQIVLIPVSVASLALGHYFAYRQGAGGRGQRLMLWIATPVSLALWVVPWMLR*
Ga0070673_1011185312	3300005364	Switchgrass Rhizosphere	MAALQIVLIPVSIASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0070701_105150582	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VASGAIAARMAALQIVLIPVSVASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0070694_1001184994	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LTAALGVLGVASGAVAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0070708_10000766812	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASGAVAARMAALQIVLIPVSIASLALGHYFACRQGAGARRQRLVLWIATPVSLALWVVPRMLR*
Ga0070708_1001301163	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASGAVAARMAELQIVLIPVSVASLALGYYFAYRQGAEGHRQRLMLRIATPVSLVLWVVPWLLR*
Ga0070706_1000980301	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLGVASGAFAARMAGLQIVLIPVSIASLTVGHYFAYRQGAGGRRQRVMLWIATPASLALWVVPWMLR*
Ga0070706_1006954502	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GALAARMAELQIVLIPVSLASLALGHYFVHRQGAGGRRQRVMLWIATPVSVALWIVPWMLR*
Ga0070707_1001743194	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASVALAARMAELQIVLIPVSIASLALGHYFAYRQGAGGHRQRVMLWIATPASLALWVVPWMLR*
Ga0070707_1002820092	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASGAVAARMSALQIVLIPVSIASLALGHYFACRQGAGGRRQRLVLWIATPVSLALWVVPSMLR*
Ga0070707_1004100232	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAELQIVLIPVSVASLALGYYFAYRQGAEGRRQRLMLWIATPVSLVLWVVPWLLR*
Ga0070707_1007065721	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AARMAELQIVLIPVSLASLALGHYFAHRAGAGRRRQRVMLWIATPISVAFWIVPWMLR*
Ga0070698_1000141378	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VASGAIAARVAEWQFLLVPLSLISLALGHYFAHRQDVGGWQRILLWTATPVSLTLWVLPHVWR*
Ga0070698_1000694942	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASGAVAARMAALQIVLIPVSIASLALGHYFACRQGAGGRRQRLVLWIATPMSLALWVVPWMLR*
Ga0070698_1015295642	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GVLGVASGALAARMAELQIVLIPLSIASLALGHYFAHRQGGGGRRQRVMLWIATPASLALWVVPWMFR*
Ga0070699_1000764993	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASGAVAARMAELQIVLIPVSVASLALGYYFAYRQGAEGHRQRLMLWIATPVSLVLWVVPWLLR*
Ga0070697_1000422373	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASGAVAARMAALQIVLIPVSVASLALGHYFAYRQGAGGRQQRLVLWIATPVSLALWVVPWMLR*
Ga0070697_1002351101	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ARVAEWQLALIPMSIVSLALAHYFAYRRGVGGHRQRVLLWIATPVSLTLWGAITGSCG*
Ga0070695_1002305581	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AVAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR
Ga0070695_1002792593	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	SGAVAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0070704_1002440461	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASGAVAARMAALQIVLIPVSVASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0068870_110592691	3300005840	Miscanthus Rhizosphere	VASGAVAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0068858_1015048811	3300005842	Switchgrass Rhizosphere	VLGVASGAVAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0075297_10001051	3300005878	Rice Paddy Soil	MAALQIVLFPVSIASLALGHYFAYRQGAGGRRQRLVLWIATPVSLGLWVVPWMLR*
Ga0097621_1003388101	3300006237	Miscanthus Rhizosphere	VLGVASGAVAARMAALQIVLIPVSVASLALGHYFAYRQGAGGRGQSLMLWIATPVFLALWVVPWMLR*
Ga0075421_1004924512	3300006845	Populus Rhizosphere	MGVAGGALSAWMAELQIVLIPLSALSLAVGHYVAYRRGAGGRRQRMLLWIATPVSLAFWILPRILG*
Ga0075425_1030895812	3300006854	Populus Rhizosphere	AARMAALQIVLIPVSVASLALGHYFAYRQGAGGRQQRLVLWIATPVSLALWVVPWMLR*
Ga0075426_104434852	3300006903	Populus Rhizosphere	ALGVLGVASGAVAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0075424_1010059832	3300006904	Populus Rhizosphere	VLGVASGALAARVADLQIVLVPVSILSLVVAHYLAHRKGAGGRGQRIALWIATPVSLALWTVPHLMR*
Ga0075436_1002782633	3300006914	Populus Rhizosphere	GAIAARMAALQIVLIPVSVASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0075435_1007057162	3300007076	Populus Rhizosphere	VASGAVAARMAALQIVLIPMSIASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0099794_102394781	3300007265	Vadose Zone Soil	MAGLQIVLIPVSIASLTVGHYFAYRQGAGGRRQRVMLWIATPASLALWVVPWMLR*
Ga0099828_113394302	3300009089	Vadose Zone Soil	MLLTAALGVLGVASGALAARMAELQIVLIPVSLASLALGHYFAYRQGAGGRRQRVMLWIATPASLALWVAPWMLR*
Ga0075423_124355471	3300009162	Populus Rhizosphere	VLGVASGALAARVADVQVILIPVSVVSLAVAHYVAYRKGAGGRGQRVALWIATPVSIALW
Ga0105238_127000081	3300009551	Corn Rhizosphere	MAALQIVLIPVSIASLSLGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0105249_131691521	3300009553	Switchgrass Rhizosphere	LLTAALGALGVASGAIAARMAALQIVLIPVSVASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0105082_11044741	3300009814	Groundwater Sand	ELQIVLIPVSIASLALGHYFAYRQGAGGRRQRVMLWVATPASLALWVVPWILR*
Ga0134128_103479904	3300010373	Terrestrial Soil	LIPVSVASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0134123_115083461	3300010403	Terrestrial Soil	MLLTAALGVLGVASGALAARVAEWQVVLIPMSVVSITLAHYFAYRRGLGGHRQRIVLWIATPVSVTLWVLPSLLR*
Ga0137392_100782065	3300011269	Vadose Zone Soil	VLGVASGAFAARMAGLQIVLIPVSIASLTVGHYFAYRQGAGGRRQRVMLWIATPASLALWVVPWMLR*
Ga0137446_11568692	3300011419	Soil	MLLTAALGLLGVASGALAARMAELQIVLIPVSIASLALGHYFAYRQGAGGRRQRVMLWIATPASLALWVVPWMLR*
Ga0137447_10907092	3300012226	Soil	LIPVSIASLALGHYFAYRQGAGGRRQRVMLWIATPASLALWVAPWMLR*
Ga0137375_106501311	3300012360	Vadose Zone Soil	VLGVASGALAARVAEVQVILIPISMVSLVAAHGFAYRQGDGGRRQRLLLWIATPVSIALWALPHVIRLSRG*
Ga0153915_121935042	3300012931	Freshwater Wetlands	VLGVASGAIAARMAALQIVLIPVSVASLALGHYFAYRQGAGGRRQRLVLWIATPVSLTLWVVPWMLR*
Ga0157373_101406561	3300013100	Corn Rhizosphere	MAALQIVLIPVSIALLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0157369_100184578	3300013105	Corn Rhizosphere	GVLGVASGAVAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV*
Ga0180104_11005392	3300014884	Soil	MLLTAALGVLGVASGALAARMAELQIVLIPVSIASLALGYYFAYRQGAGGHRQRVMLWIATPASVALWVVPWMLR*
Ga0132258_122108821	3300015371	Arabidopsis Rhizosphere	VLGVATGAIAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR*
Ga0132256_1011487851	3300015372	Arabidopsis Rhizosphere	VLGVATGAIAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRGQRLVLWIATPVSLALWVVPWMLR*
Ga0184610_10227421	3300017997	Groundwater Sediment	LGVVGVAGGALSARVAELQVVLIPVSALSLVAGHYLAYRRGTGGKRQRILLWVATPVSVAFWVLPHVLG
Ga0184610_10362653	3300017997	Groundwater Sediment	MLLTATLGVLGVASGALAARMAELQVVLIPVSIASLALGHYFAHRQGVRGRRQRVMLWIATPVSVALWIAPWMLR
Ga0184610_12766611	3300017997	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIVLIPVSLASLALGHYFAYRQGAGGHRQRVMLWIATPASLALWVVPWMLR
Ga0184634_105014752	3300018031	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIVLIPVSIASLALGHYFAYRQGAGGRRQRVMLWIATPASLALWVVPWMLR
Ga0184638_12055712	3300018052	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIFLIPVSIASLALGHYFAYRQGADGRRQRVMLWIATPVSVALWMVPWMLR
Ga0184626_100797233	3300018053	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQVVLIPVSIASLALGHYFAHRQGVRGRRQRVMLWIATPVSVALWIAPWMLR
Ga0184621_102452582	3300018054	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIVLIPVSIASLALGHYFAYRQGVRGRRQRVMLWIATPVSVALWIAPWMLR
Ga0184623_100546282	3300018056	Groundwater Sediment	VGVAGGALSARVAELQVVLIPVSALSLVAGHYLAYRRGTGGKRQRILLWVATPVSVAFWVLPHVLG
Ga0184623_102162452	3300018056	Groundwater Sediment	MLLTAALGVLGVASGALAARMADLQIVLIPVSIASLALGHYFAYRQGVRGRRQRVMLWIATPVSVALWIVPWMLR
Ga0184615_106484281	3300018059	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIVLIPVSIASLALGHYFAYRQGAGGRWQRFMLWIATPASPALWVAPLMLR
Ga0184637_101478352	3300018063	Groundwater Sediment	VGVAGGALSARVAELQVVLIPVSALSLVAGHYLAHRRGAGGKRQRILLWVATPVSVAFWVLPHVLG
Ga0184637_107547711	3300018063	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQVVLIPVSLASLALGHYFAYRQGAGGHRQRVMLWIATPASLALWVVPWMLR
Ga0184632_104260221	3300018075	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIVLIPVSIASLALGHYFAYRQGAGGHRQRVMLWIATPASVALWIVPWMLR
Ga0184632_104338702	3300018075	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIVLIPVSIASLALGFYFAYRQGVGGRRQRVMLWIATPASLALWVVPWMLR
Ga0184627_104784602	3300018079	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIVLIPVSIASLALGHYFAYRQGVRGRRQRVMLWIATPVSVALWIVPWMLR
Ga0184639_104954882	3300018082	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIVLIPVSIASLALGYYFAYRQGAGGRWQRVMLWIATPASLALWIVPWMLR
Ga0184629_101618583	3300018084	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIVLIPVSIASLALGHYFAYRQGAGGRWQRFMLWIA
Ga0187894_1000117625	3300019360	Microbial Mat On Rocks	VLGVASGAFAARVAEWQWILIPMSIASLALAYYTTYRLGRGGRRQRRLLWIATPISIALWVLPLLGR
Ga0193739_10070953	3300020003	Soil	MLLTAALGVLGVASGALAARMAELQIVLIPVSITSLALGHYFAYRQGAGGHRQRVMLWIATPASVALWIVPWMLR
Ga0210378_100313772	3300021073	Groundwater Sediment	MLLTAALGVLGVASGALAARMAEVQIVLIPVSIASLALGHYFAYRQGAGGHRQRVMLWIATPASVALWIVPWMLR
Ga0210377_101281172	3300021090	Groundwater Sediment	MLLTAALGVLGVASGALAARMAELQIVLIPVSIASLALGHYFAYRQGAGGRRQRVMLWIATPASLALWVAPLMLR
Ga0209640_100048316	3300025324	Soil	VQIVLIPVSLASLALGFYFAYRQGAGGRRQRVMLWMATPASLALWVVPWMLR
Ga0207643_107902231	3300025908	Miscanthus Rhizosphere	MAALQIVLIPVSIASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR
Ga0207684_100402682	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLGVASGAFAARMAGLQIVLIPVSIASLTVGHYFAYRQGAGGRRQRVMLWIATPASLALWVVPWMLR
Ga0207684_103917752	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VASGAVAARMAELQIVLIPVSVASIALGYYFAYRQGAEGHRQRLMLRIATPVSLVLWVVPWLLR
Ga0207684_104247082	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSALQIVLIPVSIASLALGHYFACRQGAGGRRQRLVLWIATPVSLALWVVPWMLR
Ga0207684_117039531	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAELQIVLIPVSLASLALGHYFVHRQGAGGRRQRVMLWIATPVSVALWIVPWMLR
Ga0207707_102016822	3300025912	Corn Rhizosphere	VLGVASGAVAARMAALQIVLIPVSIASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR
Ga0207649_105675861	3300025920	Corn Rhizosphere	VASGAIAARMAALQIVLIPVSVASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR
Ga0207646_100708874	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VASVALAARMAELQIVLIPVSIASLALGHYFAYRQGAGGHRQRVMLWIATPASLALWVVPWMLR
Ga0207646_100872441	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASGAVAARMAELQIVLIPVSVASLALGYYFAYRQGAEGRRQRLMLWIATPVSLVLWVVPWLLR
Ga0207646_101752143	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASGALAARVADSQVILIPVSVVSLAAAHYIAHRKGAGGRRQRVLLWIATPVSIALWVLPHVIR
Ga0207646_103649972	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVASGAVAARMAALQIVLIPVSIASLALGHYFACRQGAGGRRQRLVLWIATPVSLALWVVPSMLR
Ga0207646_110225722	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	IASLALGHYFAYRQGAGGRRQRVMLWIATPASVALWIVPWMLR
Ga0207678_103205891	3300026067	Corn Rhizosphere	MAALQIVLIPVSVASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV
Ga0257171_10241391	3300026377	Soil	MLLTAALGVLGVASGALAARMAELQIVLIPVSLASLALGHYFAYRQGAGGRRQRVMLWIATPASLALWVAPWML
Ga0256867_100169645	3300026535	Soil	VLGVASGALAARVAELQIVLIPVSIAALALGHYLAYRRGTGGSRQRVMLWIATPASLALWVVPWMLR
Ga0256866_10366381	3300027650	Soil	VLGVASGALAARVAELQIVLIPVSIAALALGHYLAYRRGTGGRRQRVMLWIATPASLALWVVPWMLR
Ga0209283_106391732	3300027875	Vadose Zone Soil	MLLTAALGVLGVASGALAARMAELQIVLIPVSLASLALGHYFAYRQGAGGRRQRVMLWIATPASLALWVAPWMLR
Ga0209974_104059282	3300027876	Arabidopsis Thaliana Rhizosphere	AARMAALQIVLIPVSIASLALGHYFAYRQGAGGRRQRLVLWIATPVSLALWVV
Ga0209382_104516441	3300027909	Populus Rhizosphere	MGVAGGALSAWMAELQIVLIPLSALSLAVGHYVAYRRGAGGRRQRMLLWIATPVSLAFWILPRILG
Ga0209889_10960001	3300027952	Groundwater Sand	PVSIASLALGHYFAYRQGAGGRRQRVMLWIATPASLALWVVPWVLR
Ga0209853_11540771	3300027961	Groundwater Sand	VLGVASGALAARMAELQIVLIPVSIASLALGHYFAYRQGAGGRRQRVMLWVATPASLALWVVPWILR
Ga0268265_105808022	3300028380	Switchgrass Rhizosphere	MLLTATLGVLGVASGALAARVAEWQVVLIPMSIVSLALAHYFAYRRGVGGHRQRVLLWIATPVSLTLWVLPYLIR
Ga0299907_101608193	3300030006	Soil	VLGVASGALAARVAELQIVLIPVSIAALALGHYVAYRRGTGGRRQRVMLWIATPASLALWVVPWMLR
Ga0299913_102210893	3300031229	Soil	VLGVASGALAARVAELQIVLIPVSIAALALGHYLAYRRGAGGRRQRVMLWIATPASLALWVVPWMLR
Ga0214473_115640032	3300031949	Soil	VASGAVAARMAELQIVLIPVSVVSLALGHFFAYRQGVEGRRQRLMLWIATPVSLALWVVPWMLR
Ga0334722_105674562	3300033233	Sediment	GVASVALSARMADLQIVLIPVSIASLALGHYFAYRQGAGGPRQRVMLWIATPASVALWIVPWMLR
Ga0310810_1000644110	3300033412	Soil	MAALQIVLIPVSVASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR
Ga0316628_1017311082	3300033513	Soil	QIVLIPVSVASLALGHYFAYRQGAGGRGQSLMLWIATPVSLALWVVPWMLR
Ga0364928_0148155_365_565	3300033813	Sediment	VGVAGGALSARVAELQVVLIPVSALSLVAGHYLAHRRGSEGKRQRILLWVATPVSVAFWVLPHVLG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076209

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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