Metagenome / Metatranscriptome Family F076207

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076207
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	69 residues
Representative Sequence	PILIAETGAVPAAGQPAKISDLFAGIRSYGLLGFVWFNSTNNVGQAFGLSSPAAIAAFRTGASTYGRPGS
Number of Associated Samples	94
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.68 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (54.237 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (20.339 % of family members)
Environment Ontology (ENVO)	Unclassified (16.102 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.305 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.67% β-sheet: 2.04% Coil/Unstructured: 64.29%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF02156	Glyco_hydro_26	27.97
PF03721	UDPG_MGDP_dh_N	3.39
PF13231	PMT_2	3.39
PF13641	Glyco_tranf_2_3	1.69
PF04138	GtrA	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG4124	Beta-mannanase	Carbohydrate transport and metabolism [G]	27.97
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.39
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	3.39
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	3.39
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	3.39
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	3.39

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
All Organisms	root	All Organisms	45.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
cellular organisms	root	All Organisms → cellular organisms	45.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	44.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	23.73 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	10.17 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	10.17 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	8.47 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.73 %
Streptomyces collinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces collinus	1.69 %
Mycobacterium xenopi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi	0.85 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.73 %
Streptomyces collinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces collinus	1.69 %
Streptomyces sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp.	0.85 %
Mycobacterium xenopi 4042	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi → Mycobacterium xenopi 4042	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_101384238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces collinus	888	Open in IMG/M
3300005338\|Ga0068868_100327541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1306	Open in IMG/M
3300005435\|Ga0070714_100212288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1775	Open in IMG/M
3300005436\|Ga0070713_101066025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300005436\|Ga0070713_102395658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces collinus	510	Open in IMG/M
3300005437\|Ga0070710_10047997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp.	2383	Open in IMG/M
3300005439\|Ga0070711_100342011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1201	Open in IMG/M
3300005467\|Ga0070706_100882662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	826	Open in IMG/M
3300005610\|Ga0070763_10406454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	766	Open in IMG/M
3300005712\|Ga0070764_10193981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1136	Open in IMG/M
3300005995\|Ga0066790_10056557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1694	Open in IMG/M
3300006028\|Ga0070717_10609838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300006237\|Ga0097621_100406014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1220	Open in IMG/M
3300006237\|Ga0097621_101389968	Not Available	664	Open in IMG/M
3300006904\|Ga0075424_102129605	Not Available	591	Open in IMG/M
3300009623\|Ga0116133_1082078	Not Available	811	Open in IMG/M
3300010373\|Ga0134128_11404659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300010379\|Ga0136449_100128434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5060	Open in IMG/M
3300010379\|Ga0136449_102596315	Not Available	723	Open in IMG/M
3300010379\|Ga0136449_103505630	Not Available	597	Open in IMG/M
3300010379\|Ga0136449_104641852	Not Available	503	Open in IMG/M
3300010399\|Ga0134127_13555012	Not Available	511	Open in IMG/M
3300010876\|Ga0126361_10996457	Not Available	588	Open in IMG/M
3300012200\|Ga0137382_10300728	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300012363\|Ga0137390_10755850	Not Available	932	Open in IMG/M
3300012363\|Ga0137390_11486766	Not Available	619	Open in IMG/M
3300012957\|Ga0164303_10619692	Not Available	716	Open in IMG/M
3300013307\|Ga0157372_12024509	Not Available	662	Open in IMG/M
3300014201\|Ga0181537_11237888	Not Available	504	Open in IMG/M
3300014838\|Ga0182030_10186998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2517	Open in IMG/M
3300014969\|Ga0157376_10135348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2204	Open in IMG/M
3300017928\|Ga0187806_1100815	Not Available	922	Open in IMG/M
3300017932\|Ga0187814_10413523	Not Available	526	Open in IMG/M
3300017938\|Ga0187854_10452291	Not Available	536	Open in IMG/M
3300017940\|Ga0187853_10151505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M
3300017946\|Ga0187879_10495047	Not Available	678	Open in IMG/M
3300017959\|Ga0187779_11099473	Not Available	555	Open in IMG/M
3300017970\|Ga0187783_10346997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300017970\|Ga0187783_11264375	Not Available	532	Open in IMG/M
3300018024\|Ga0187881_10362409	Not Available	596	Open in IMG/M
3300018034\|Ga0187863_10431867	Not Available	735	Open in IMG/M
3300018034\|Ga0187863_10660582	Not Available	589	Open in IMG/M
3300018035\|Ga0187875_10133521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1396	Open in IMG/M
3300018043\|Ga0187887_10081967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1953	Open in IMG/M
3300018085\|Ga0187772_10214641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1296	Open in IMG/M
3300018085\|Ga0187772_11245976	Not Available	549	Open in IMG/M
3300020062\|Ga0193724_1077332	Not Available	692	Open in IMG/M
3300020140\|Ga0179590_1100763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300020582\|Ga0210395_10732866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300020583\|Ga0210401_10512463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1062	Open in IMG/M
3300020583\|Ga0210401_10556190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1009	Open in IMG/M
3300021171\|Ga0210405_10134287	Not Available	1958	Open in IMG/M
3300021171\|Ga0210405_11332403	Not Available	526	Open in IMG/M
3300021402\|Ga0210385_10461122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300021403\|Ga0210397_10621475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300021403\|Ga0210397_10910911	Not Available	681	Open in IMG/M
3300021403\|Ga0210397_11499972	Not Available	523	Open in IMG/M
3300021406\|Ga0210386_11322711	Not Available	606	Open in IMG/M
3300021407\|Ga0210383_10631561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300021407\|Ga0210383_11273841	Not Available	615	Open in IMG/M
3300021407\|Ga0210383_11475358	Not Available	563	Open in IMG/M
3300021432\|Ga0210384_11051985	Not Available	716	Open in IMG/M
3300021433\|Ga0210391_10045961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3479	Open in IMG/M
3300021478\|Ga0210402_10501288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1127	Open in IMG/M
3300021479\|Ga0210410_10560690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300021559\|Ga0210409_10530445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M
3300021559\|Ga0210409_11567707	Not Available	535	Open in IMG/M
3300021559\|Ga0210409_11734977	Not Available	501	Open in IMG/M
3300022557\|Ga0212123_10525606	Not Available	762	Open in IMG/M
3300022724\|Ga0242665_10325086	Not Available	544	Open in IMG/M
3300025625\|Ga0208219_1080216	Not Available	761	Open in IMG/M
3300025634\|Ga0208589_1057326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	972	Open in IMG/M
3300025916\|Ga0207663_10950936	Not Available	688	Open in IMG/M
3300025929\|Ga0207664_10080994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2640	Open in IMG/M
3300025929\|Ga0207664_10409672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1206	Open in IMG/M
3300025929\|Ga0207664_11815293	Not Available	532	Open in IMG/M
3300025935\|Ga0207709_11264534	Not Available	609	Open in IMG/M
3300025960\|Ga0207651_11323134	Not Available	648	Open in IMG/M
3300027575\|Ga0209525_1058551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi → Mycobacterium xenopi 4042	934	Open in IMG/M
3300027855\|Ga0209693_10312124	Not Available	766	Open in IMG/M
3300027879\|Ga0209169_10610443	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300027986\|Ga0209168_10447894	Not Available	626	Open in IMG/M
3300028747\|Ga0302219_10427825	Not Available	519	Open in IMG/M
3300028793\|Ga0307299_10358326	Not Available	547	Open in IMG/M
3300028795\|Ga0302227_10223041	Not Available	725	Open in IMG/M
3300028877\|Ga0302235_10509473	Not Available	511	Open in IMG/M
3300028879\|Ga0302229_10367085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300029910\|Ga0311369_10876762	Not Available	719	Open in IMG/M
3300029943\|Ga0311340_10470743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1132	Open in IMG/M
3300029943\|Ga0311340_10861299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300029943\|Ga0311340_11247492	Not Available	595	Open in IMG/M
3300029944\|Ga0311352_10539766	Not Available	938	Open in IMG/M
3300029993\|Ga0302304_10351082	Not Available	537	Open in IMG/M
3300030007\|Ga0311338_10153199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2739	Open in IMG/M
3300030043\|Ga0302306_10417897	Not Available	512	Open in IMG/M
3300030056\|Ga0302181_10164715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1049	Open in IMG/M
3300030399\|Ga0311353_10070613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3465	Open in IMG/M
3300030399\|Ga0311353_10653440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	913	Open in IMG/M
3300030490\|Ga0302184_10214516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300030494\|Ga0310037_10267467	Not Available	737	Open in IMG/M
3300030509\|Ga0302183_10289975	Not Available	633	Open in IMG/M
3300030520\|Ga0311372_10130983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4420	Open in IMG/M
3300030618\|Ga0311354_10045629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5141	Open in IMG/M
3300031234\|Ga0302325_10566053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1688	Open in IMG/M
3300031236\|Ga0302324_102306224	Not Available	664	Open in IMG/M
3300031525\|Ga0302326_10195954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3382	Open in IMG/M
3300031525\|Ga0302326_13033546	Not Available	572	Open in IMG/M
3300031546\|Ga0318538_10552788	Not Available	624	Open in IMG/M
3300031708\|Ga0310686_104509924	Not Available	789	Open in IMG/M
3300031715\|Ga0307476_10901738	Not Available	652	Open in IMG/M
3300031823\|Ga0307478_11590355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300031837\|Ga0302315_10658878	Not Available	553	Open in IMG/M
3300031947\|Ga0310909_11243351	Not Available	601	Open in IMG/M
3300032895\|Ga0335074_10407019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1472	Open in IMG/M
3300032898\|Ga0335072_10436193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1388	Open in IMG/M
3300032898\|Ga0335072_11610201	Not Available	547	Open in IMG/M
3300033158\|Ga0335077_11493849	Not Available	647	Open in IMG/M
3300034163\|Ga0370515_0473284	Not Available	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.22%
Host-Associated	Host-Associated	6.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.36%
Aquatic	Environmental → Aquatic	11.86%
Plants	Host-Associated → Plants	6.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.02%
Peat	Environmental → Terrestrial → Peat	20.34%
Freshwater	Environmental → Aquatic → Freshwater	11.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.24%
Roots	Host-Associated → Plants → Roots	1.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.34%
Loam	Environmental → Terrestrial → Soil → Loam	13.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.02%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.39%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.69%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.39%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	20.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.49%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1013842381	3300004092	Bog Forest Soil	QFAPLFGPTIGSIHALTHDPILIAETGATAATGQPAKIADVFAGVHAYGLLGLVWFDATNSARQDFSISNPAAMTAFRTGASSFARPGS*
Ga0068868_1003275411	3300005338	Miscanthus Rhizosphere	GPTIGTVRRLTDAPILIGETGAVPAAGQPAKISDLFAGIRSYGLLGFVWFNSTNNVGQAFGLNGPASIAAFRKGASTYGRPGS*
Ga0070714_1002122881	3300005435	Agricultural Soil	LTDAPILIAETGAVPAAGQPAKISDLFTGIRSYGLLGFVWFNSTNNIGQAFGLSSPEAIAAFRKGASTYGRPGT*
Ga0070713_1010660251	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LTDAPILIAETGAVPASGQPAKISDLFAGIRSYGLLGFVWFNSTNNVGQAFGLSSPAAIAAFRTGASTYGRPGS*
Ga0070713_1023956581	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRSLTSAPILIAETGATSAAGQPSKIADVFAGIHAYGLLGFVWFNATNSIGEAFGISSSGAFDAFRKGASAYTRPGS*
Ga0070710_100479973	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VPAAGQPAKISDLFAGIRSYGLLGLVWFNSTNTVGQAFGLSSPEAIAAFRRGASTYGRPGS*
Ga0070711_1003420111	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PDPILIAETGAVPAADQPEKIADLFSGIRRYGLLGFVYFDSTTDRGLHFGIESPAAVAAFREGASTYSRPGS*
Ga0070706_1008826621	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	HTLTNAPILIAETGAVPAAGQPAKIDDLFAGIRSYGLLGFVWFNSTNTVGQAFGLGSPAAITAFKKGASAYHRPGS*
Ga0070763_104064541	3300005610	Soil	LTSDPILIAETGAVPATGQARKITDLFAGIRAYGLLGLVWFDATDYDHQDFSLSSPAAIAAFRKGASSYVRPGS*
Ga0070764_101939811	3300005712	Soil	APILIAETGAVQTADQPAKISDLFTGIRQYGLLGFVWFDSVNSKHQNFRIDSQSAITAFRRGASAYTRPDS*
Ga0066790_100565573	3300005995	Soil	SVRSLTTDPILIAETGAIPTAGQPAKITNLFAGIQSYGLLGFVWFNTSSLTGQPFSISSPAAIAAFRKGASAYRRPGS*
Ga0070717_106098382	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IADLFAGIRRYGLLGFVYFNSTTDAGLHFGIESPGAIAAFREGASTYSRPGS*
Ga0097621_1004060142	3300006237	Miscanthus Rhizosphere	AAGQPAKISDLFAGIRSYGLLGFVWFNSTNNVGQAFGLNGPASIAAFRKGASTYGRPGS*
Ga0097621_1013899681	3300006237	Miscanthus Rhizosphere	GETGATPDAGQPAKIADLFAGIRTYGLLGFVWFDTTDNKGQQFGISTPAATGAFGQGAGTYRRPGS*
Ga0075424_1021296052	3300006904	Populus Rhizosphere	GQPAKISDLFAGVRSYGLLGFVWFNSTNNVGQAFGLSGPAAIAAFREGASTYGRPGS*
Ga0116133_10820781	3300009623	Peatland	AVRALSRVPVPILISETAAAPAAGQPAKIADLFAGIHQYGLLGFVYFDSTNSKGQHFGFTSHAAVAAFRKGASTYTRPGG*
Ga0134128_114046592	3300010373	Terrestrial Soil	ETGATPAADQPGKIADVFAGIRKYGLLGFVWFNSTNSKGQPFSINSATAIAEFRKGASTFTRPDS*
Ga0136449_1001284345	3300010379	Peatlands Soil	ATPIAGQSAKIADVFAGVRLYGLLGFVYFDAINFKGENFTVSSPAGLTAFGKGASNFTRPGS*
Ga0136449_1025963152	3300010379	Peatlands Soil	DGYYLKPDWQFAPLFGPPIASVRTLTQDPILIAETGATPTAGQPSKIADIFAGVHLYGLLGFVYFDATNFQGEDFSVSSAAAVAAFGKGAGTFSRPAS*
Ga0136449_1035056302	3300010379	Peatlands Soil	RALTSDPILVAETGVVPDAGQPAKIADVFAGIRLYGLLGFVYFDATDYRGLDFSLSDQAAIAAFRQGASNLARPGS*
Ga0136449_1046418521	3300010379	Peatlands Soil	SDPILVAETGVVPDAGQPAKIADVFAGVRLYGLLGFVYFDATDYRGLDFSLGDPAAIAAFRQGASSVARPGS*
Ga0134127_135550122	3300010399	Terrestrial Soil	LIAETGAVLTAGQPEKITDLFNGIRSYGLLGFVWFNTSNSIGQSFGISSSAANTAFHKGASSYHRPGS*
Ga0126361_109964571	3300010876	Boreal Forest Soil	AETGALPTTGQATKINDLFSGIRLYGLLGFVWYDTTNSIDQRFGINGPAAIAAFRAGASTYRRPGS*
Ga0137382_103007281	3300012200	Vadose Zone Soil	PTVAAVRSLTRDPIIIGETGATTAAGQPAKIADVFSGIHAYGLLGFIWFDARNYQGLDFSINTPASAIAFRNGAGTFTRPGS*
Ga0137390_107558502	3300012363	Vadose Zone Soil	ILIAETGAVPAAGQPAKIADLFTGIHLYGLLGFVWFDNTDSIGQHFGINSPAAIAAFRKGASTYHRPGS*
Ga0137390_114867662	3300012363	Vadose Zone Soil	AAGQPAKIADLFAGIRTYGLLGFVWFDNTNSIGEHFGIDSPAAIAAFRKGASTYRRPGS*
Ga0164303_106196921	3300012957	Soil	ETGATTAAGQPTKIADVFSGIHAYGLLGFIWFDARNYQGVDFSISTPASAVAFRNGAGTFTRPGS*
Ga0157372_120245091	3300013307	Corn Rhizosphere	GQPAKIADLFAGIRTYGLLGFVWFDTTDNKGQQFGISTPAATGAFGQGAGTYRRPGS*
Ga0181537_112378881	3300014201	Bog	AKINDLFNGIQLYGLLGFVYFDSTDDSADQNKNFVISSEAALAAFRKGASTYHRPG*
Ga0182030_101869981	3300014838	Bog	TAVQPAKITNLFAGIQSYGLLGFVYFNTSSITGQPFSISSPAALAAFRKGASTYHRPGS*
Ga0157376_101353483	3300014969	Miscanthus Rhizosphere	LIGETGATPGAGQPAKIADLFAGIRTYGLLGFVWFDTTDNKGQQFGISTPAATGAFGQGAGTYRRPGS*
Ga0187806_11008152	3300017928	Freshwater Sediment	IAETGAVPDAGQPAKIADVFGGIHAYGLLGFVWFDSTDSTGQEFGISSPTAFAAFRKGASTFTRPGS
Ga0187814_104135231	3300017932	Freshwater Sediment	LTGDPILISETGATHAVGQPTKIADVFAGIHEYGLLGLVWFDSTNSSGQDFGISSPAAIAAFRQGAETYSRPSS
Ga0187854_104522911	3300017938	Peatland	DPILIAETGATIAAGQPGKISDLFQGIRTYGLLGFVYYDNTNDIGQAFGLDGPAAIAAFRKGASTYHRPT
Ga0187853_101515052	3300017940	Peatland	DPILIAETGATTTAGQPGKISDLFQGIQTYGLLGFVYYDNTNNIGQAFGLDGPAAIAAFRKGASTYHRPT
Ga0187879_104950471	3300017946	Peatland	AETGAVRSANQPAKINDLFAGIRSYGLLGFVWFNSANPKGQQFSINTPAAVAAFRKDASTYHRPGS
Ga0187779_110994732	3300017959	Tropical Peatland	GATPAAGQPDKISDLFAGIRRYGLLGFVWFNATNSHGVPFGISGPKAVAAFRKGASTYGRPGS
Ga0187783_103469971	3300017970	Tropical Peatland	QFAPVFGPTVFAVRELTRDPILISETGATHAVDQPAKIADVFAGIHEYGLLGLVWFDSTDSAGRDFGIRSPAAIAAFRRGAKTYIRPSS
Ga0187783_112643751	3300017970	Tropical Peatland	IAETGAVPASGQPSKIADLFAGIRAYGLLGFVYFDATNSIHQDFGLSSPAAVDAFRQGASTYHRPGS
Ga0187881_103624091	3300018024	Peatland	TGAVPAAGQPAKIADLFAGIHQYGLLGFVYFDSTNSIGQHFGFTSHAAVAAFRKGASTYTRPGG
Ga0187863_104318672	3300018034	Peatland	TGDPILIAETGATIAAGQPGKISDLFQGIRTYGLLGFVYYDNTNDIGQAFGLDGPAAIAAFRKGASTYHRPT
Ga0187863_106605821	3300018034	Peatland	PAKIADLFAGIHQYGLLGFVYFDSTNSTHQHFGFTSPAAVAAFRKGASTYTRPGG
Ga0187875_101335213	3300018035	Peatland	TLDPILVAETGAVPAAGQPAKIADLFAGIHQYGLLGFVYFDSTNSIGQHFGFTSHAAVAAFRKGASTYTRPGG
Ga0187887_100819671	3300018043	Peatland	TIAAVRKLTLDPILVAETGAVPAAGQSAKIADLFSGIHQYGLLGFVYFDSTNSIGQHFGLSTPAAVAAFRKGASTYTKPGG
Ga0187772_102146411	3300018085	Tropical Peatland	IAETGAVPDADQPAKITDVFAGIHAYGLLGFVWFDSTDNTGQDFGISSPAALAAFRKGASTFTRPES
Ga0187772_112459762	3300018085	Tropical Peatland	PLFGPTIGAVRALTNDPILVAETGATSAAGQPAKIDDLFAGIRLYGLLGLVWFDATNYQGLDFRINSPAAVAAFGRDANTFTRPGS
Ga0193724_10773322	3300020062	Soil	VRRLTDAPILIAETGAVPAAGQPAKISELFAGIRSYGLLGLVWFNSTNNIGQAFGLNGPAAIAAFREGASTYGRPGS
Ga0179590_11007632	3300020140	Vadose Zone Soil	ILIAETGAVPAAGQPAKISDLFAGIRSYGLLGFVWFNSTNNIGQAFGLNGPAAIAAFREGASTYGRPGS
Ga0210395_107328661	3300020582	Soil	PTSGQPAKINDLFAGVRSYGLLGFVWFNSTNSIGQSFGISSPAAIAAFRKGATAFGKPG
Ga0210401_105124632	3300020583	Soil	VRALTVDPILIAETGAIQTVGQPAKINDLFAGIHSYGLLGFVWFDTTNSIGQAFGVNSPAAIAAFRKGASAYHRPGS
Ga0210401_105561901	3300020583	Soil	ILIAETGATAFADQPAKIADAFAGIHAYGLLGLVWFDSTDKKGQNFSLSGAAALTAFRHGASTFTRPGS
Ga0210405_101342871	3300021171	Soil	ADQPGKITDVFAGIHAYGLLGFVWFDSTNSVKQDFSINSPAALAAFRKGASTFVRPGS
Ga0210405_113324032	3300021171	Soil	ETGAVPTSGQPAKINDLFAGVRSYGLLGFVWFNSTNSIGQSFGISSPAAIAAFRKGATAFGKPG
Ga0210385_104611222	3300021402	Soil	AETGAVPDAGQPAKIADVFAGIHAYGLLGFVWFDSTNSVGQDFGISSPGAFAAFRKGASTFARPGS
Ga0210397_106214751	3300021403	Soil	VPAAGQSAKMTDLFSGIHRYGLLGFVWFNSTNSSGQQFGLSSPQAVAAFRKGASAYTRPA
Ga0210397_109109111	3300021403	Soil	TSDPILIAETGATTAAGQPAKIADVFAGVHAYGLLGFVWFNSTNSVGQAFGISGSGAYDAFRKGASTFTRPRS
Ga0210397_114999722	3300021403	Soil	IAVRELTRDPILIAETGATHAVGQSAKIADVFAGIQKYGLLGLVWFDTTNGSGQDFGIRSPAAIVAFRRGAKTYIRPSS
Ga0210386_113227111	3300021406	Soil	ILIAETGAVPTAGQPAKITNLFAGIRSYGLLGFVWFDTTNSIGQLFGINSPAAIAAFREGASTYHRPGS
Ga0210383_106315611	3300021407	Soil	SETGAVPPSGQPAKINDLFAGVRSYGLLGFVWFNSTNSIGQSFGISSPAAIAAFRKGATAFGKPG
Ga0210383_112738411	3300021407	Soil	AVPTSGQPAKINDLFAGVRSYGLLGFVWFNSTNSIGQSFGISSPAAIAAFRKGATAFGKP
Ga0210383_114753582	3300021407	Soil	PIAGQPAKIADVFAGIHAYGLLGFVWFDSTNSIGLDFSVSSAGALAAFRTGASTFTRPGS
Ga0210384_110519852	3300021432	Soil	TDAPILIAETGAVPAAGQPAKISDLFTGIRSYGLLGFVWFNSTNNIGQAFGLSSPEAIAAFRKGASTYGRPGT
Ga0210391_100459615	3300021433	Soil	TGATAAAGQPAKIADVFAGIHAYGLLGLVWYDSTDKTRQDFSITSAAALTAFGHGASTFTRPGS
Ga0210402_105012881	3300021478	Soil	APILIAETGAVPASGQPAKISDLFAGIRSYGLLGFVWFNSTNNVGQAFGLSSPAAIAAFRTGARTYGRPGS
Ga0210410_105606901	3300021479	Soil	ILIAETGAVPAAGQPAKISDLFTGIRSYGLLGFVWFNSTNNIGQAFGLSSPEAIAAFRKGASTYGRPGT
Ga0210409_105304452	3300021559	Soil	IATVRALTDAPILIAETGAVPAAGQPAKISDLFAGIRSYGLLGFVWFNSTNNVGQAFGLSSPAAIAAFRTGASTYGRPGS
Ga0210409_115677072	3300021559	Soil	TGDPILIAETGATAAADQPGKITDVFAGIHAYGLLGFVWFDSTNSVKQDFSINSPAALAAFRKGASTFVRPGS
Ga0210409_117349771	3300021559	Soil	APLTQDPILIAETGATPTAGRPAKIADVFAGVRLYGLLGFVYFDATDFKGQDFSISSPTALAAFGKGASAFTRPAA
Ga0212123_105256062	3300022557	Iron-Sulfur Acid Spring	TIAAVRKLTLDPILVAETGAVPAAGQPEKIADLFSGIHQYGLLGFVWFDSTNSIGQHFGLTSPGALAAFHKGASTYARPGG
Ga0242665_103250861	3300022724	Soil	PILIAETGATPTAGRPAKIADVFAGVRLYGLLGFVYFDATDFKGQDFSISSPTALAAFGKGASAFTRPAA
Ga0208219_10802162	3300025625	Arctic Peat Soil	AAGQPAKITDLFSGIHRYGLLGFVWFNSTNSSGQQFGLSSPQAVTAFRKGASTYSRPGG
Ga0208589_10573262	3300025634	Arctic Peat Soil	ILVAETGAVPAAGQPAKIADLFSGIHQYGLLGFVWFDSTNSYGLHFDLSSPAAVAAFRKGASTYTRPGG
Ga0207663_109509362	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TVRALTDAPILIAETGAVPAAGQPAKISDLFTGIRSYGLLGFVWFNSTNNIGQAFGLSSPEAIAAFRKGASTYGRPGT
Ga0207664_100809941	3300025929	Agricultural Soil	ATPDAGQPAKIADLFAGIRTYGLLGFVWFDTTDNKGQQFGISTPAATGAFGQGAGTYRRPGS
Ga0207664_104096722	3300025929	Agricultural Soil	TVRALTDAPTLIAETGAVPAAGQPAKISDLFTGIRSYGLLGFVWFNSTNNIGQAFGLSSPEAIAAFRKGASTYGRPGT
Ga0207664_118152932	3300025929	Agricultural Soil	PILIAETGAVPAAGQPAKISDLFAGIRSYGLLGFVWFNSTNNVGQAFGLSSPAAIAAFRTGASTYGRPGS
Ga0207709_112645342	3300025935	Miscanthus Rhizosphere	DAPILIGETGAVPAAGQPAKISDLFAGIRSYGLLGFVWFNSTNNVGQAFGLNGPASIAAFRKGASTYGRPGS
Ga0207651_113231342	3300025960	Switchgrass Rhizosphere	AGQPAKISDLFAGIRSYGLLGFVWFNSTNNVGQAFGLNGPASIAAFRKGASTYGRPGS
Ga0209525_10585512	3300027575	Forest Soil	PILIAETGTTPAAGQVAKIADVFAGVRLYGLLGFVYFDATNSEGEDFSISSPGALAAFSKGAGTFTRPGS
Ga0209693_103121242	3300027855	Soil	LTSDPILIAETGAVPATGQARKITDLFAGIRAYGLLGLVWFDATDYDHQDFSLSSPAAIAAFRKGASSYVRPGS
Ga0209169_106104432	3300027879	Soil	AVRQLTTAPILIAETGAVQTADQPAKISDLFTGIRQYGLLGFVWFDSVNSKHQNFRIDSQSAITAFRRGASAYTRPDS
Ga0209168_104478942	3300027986	Surface Soil	ETGATGAAGQPAKITDVFAGIHAYGLLGFVWFDSTNSIGLDFSVGSPAALDAFRKGASTFTRPGS
Ga0302219_104278251	3300028747	Palsa	FTGDPILIAETGATTAAGQPGKISDLFQGIQTYGLLGFVYYDNTNDIGQAFGLDGPAAIAAFRKGASTYHRPT
Ga0307299_103583261	3300028793	Soil	LTDAPILIAETGAVPAAGQPAKISDLFAGIRSYGLLGLVWFNSTNNIGQAFGLGSPAAIAAFRKGASTYGRPGS
Ga0302227_102230412	3300028795	Palsa	ATPDSGQPAKIADAFAGMKAYGLLGFVWFDTTNSEGQGFGISTPAAFAAFRKGASSTYTRPAS
Ga0302235_105094731	3300028877	Palsa	TITTVRGFTGDPILIAETGATTAAGQPGKISDLFQGIQTYGLLGFVYYDNTNDIGQAFGLDGPAAIAAFRKGASTYHRPT
Ga0302229_103670852	3300028879	Palsa	DPILIAETGAVQTADQPAKINDLFAGIRSYGLLGFVWFNSTNTVDQHFAVNSPAAIAAFRKGASTLTRPAS
Ga0311369_108767622	3300029910	Palsa	IGEVKELTRDPILIAETGATASSGQPAKIADAFAGIQAYGLLGFVWFDTTDATGQGFGISTPAAFAAFRKGASSTYTRPAS
Ga0311340_104707431	3300029943	Palsa	DPILIAETGAVPAAGQPSKIRDLFAGIRSYGLLGFVWFDSTNSIGQPFSISGTAAIDAFRKGASTYGRPGS
Ga0311340_108612991	3300029943	Palsa	RNLTGDPILIAETGAIPGANQPAKITNLFAGIRSYGLLGFVWFDSTNTIGQHFSLNSPAAFAAFREGASKYGRPGS
Ga0311340_112474921	3300029943	Palsa	TGDPILVAETGATIAAGQPGKISDLFQGIRTYGLLGFVYYDNTNDIGQAFGLDGPSAIAAFRKGASTYHRPT
Ga0311352_105397661	3300029944	Palsa	PAKIADAFAGIQAYGLLGFVWFDTTDATGQGFGISTPAAFAAFRKGASSTYTRPAS
Ga0302304_103510822	3300029993	Palsa	IGEVKELTRDPILIAETGATASSGQPAKIADAFAGIQAYGLLGFVWFDTTNSEGQGFGISTPAAFAAFRKGASSTYTRPAS
Ga0311338_101531991	3300030007	Palsa	GQPAKIADAFAGIQAYGLLGFVWFDTTDATGQGFGISTAAAFAAFRKGASSTYTRPAS
Ga0302306_104178971	3300030043	Palsa	ASVRTLTQDPILIAETGATPTAGQPAKIADLVAGVHLYNLLGFVYFDATNSEHQAFGLSSPAAAAAFGKGAGSFTRLAS
Ga0302181_101647152	3300030056	Palsa	ETGAMQSANQPAKINDLFAGIRSYGLLGFVWFNSTNTVDQHFAVNSPAAIAAFRKGASTLTRPAS
Ga0311353_100706131	3300030399	Palsa	LTRDPILIAETGATASSGQPAKIADAFAGIQAYGLLGFVWFDTTDATGQGFGISTPAAFAAFRKGASSTYTRPAS
Ga0311353_106534402	3300030399	Palsa	PILIAETGAVQTADQPAKINDLFAGIRSYGLLGFVWFNSTNTVDQHFAVNSPAAIAAFRKGASTLTRPAS
Ga0302184_102145162	3300030490	Palsa	AKINDLFAGIRSYGLLGFVWFNSTNTAGQQFDISSSAALAAFRKGASAYHRPGS
Ga0310037_102674671	3300030494	Peatlands Soil	ASIHALTRDPILIAETGATAIADQPAKIADVFAGIHAYGLLGLVWFDSTNTKRQDFSVGSPAALDAFRKGASTFTRPGS
Ga0302183_102899752	3300030509	Palsa	AGQPGKISDLFQGIQTYGLLGFVYYDNTNDIGQAFGLDGPAAIAAFRKGASTYHRPT
Ga0311372_101309837	3300030520	Palsa	PILIAETGAIPGANQPAKITDLFAGIRSYGLLGFVWFDSTNTVGQQFSLNSPAAFAAFREGASKYSRPGS
Ga0311354_100456298	3300030618	Palsa	APILLAEPGATPASGQPAKIANLFAGVQTYGLLGLVYYDNTNDIGQPFGLDGPAAIDAFRKGASTYHRPTS
Ga0302325_105660532	3300031234	Palsa	LTQDPILIGETGATQAAGQPAKLADVFAGVHLYGLLGFVYFDATNYQGENFSLTSPAALEAFGKGASAFTRPTS
Ga0302324_1023062242	3300031236	Palsa	ATASSGQPAKIADAFAGIQAYGLLGFVWFDTTDATGQGFGISTPAAFAAFRKGASSTYTRPAS
Ga0302326_101959544	3300031525	Palsa	TGAVPAADQPSKISDLFAGIRSYGLLGFVWFDSTNSIGQPFSISSTAAIDAFRKGASTYGRPGS
Ga0302326_130335462	3300031525	Palsa	IAETGALQSVDQPAKINDLFAGIRDYGLLGFVWFDNTNTIGQHFGLGSPAAFAAFRKGASNYHRPGS
Ga0318538_105527882	3300031546	Soil	GVVPAAGQPTKINDLFAGVRAYGLLGFVWFNSTNTIGQTFGISDPAAIAAFRKGASTYHRPGS
Ga0310686_1045099241	3300031708	Soil	PILIAETGAVPATGQARKITDLFAGIRAYGLLGLVWFDATDYDHQDFSLSSPAAIAAFRKGASSYVRPGS
Ga0307476_109017381	3300031715	Hardwood Forest Soil	ETGVVPDAGQPAKIADVFAGVRLYGLLGFVYFDATDFKGQDFSISGPTALAAFGKGASAFTRPAA
Ga0307478_115903552	3300031823	Hardwood Forest Soil	VRTLTGDPILIAETGATGAANQPAKIADVFAGIHAYGLLGFVWFDSTNSVNQDFSINSPAALAAFGKGAGTFVRPGS
Ga0302315_106588781	3300031837	Palsa	GAIPGANQPAKITDLFAGIRSYGLLGFVWFDSTNTVGQQFSLNSPAAFAAFREGASKYSRPGS
Ga0310909_112433511	3300031947	Soil	VPAAGQSAKINDLFAGVRAYGLLGFVWFNSTNTIGQTFGISDPAAIAAFRKGASTYHRPG
Ga0335074_104070193	3300032895	Soil	IASIHALTRDPILIAETGATATAGQPAKIADVFAGVRAYGLLGLVWFDSTNSAGQDFSVSSPAAMAAFRNGASTFTRPGS
Ga0335072_104361931	3300032898	Soil	TGAVTSADQPAKIADLYHGIKSYGLLGFVYFNSTNSIGQAFGLDSQAAIDAFRKGAGTYHRPDS
Ga0335072_116102011	3300032898	Soil	SDPILVAETGAVPAADQASKISDLFAGVRRYGLLGFVYFDSTNSAHQQFDIQSSASFNAFRKGASTYSRPGS
Ga0335077_114938492	3300033158	Soil	AGQPAKITDLFAGVRHYGLLGFVYFDSTNSIGQHFGLSTPAAVAAFRKGASTYTRPGG
Ga0370515_0473284_353_526	3300034163	Untreated Peat Soil	GQSAKISNLFAGIRSYGLLGFVWFDSTNSIGQPFGINSPAAVAAFREAASTYHRPGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076207

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences