Metagenome Family F076200

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076200
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	62 residues
Representative Sequence	MPRLELFPFRYRDRVTGKWVKARYVAERHEIAARYTEWEIIGPPEIRDVDPHARY
Number of Associated Samples	90
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	30.63 %
% of genes near scaffold ends (potentially truncated)	68.64 %
% of genes from short scaffolds (< 2000 bps)	88.98 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.085 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (11.017 % of family members)
Environment Ontology (ENVO)	Unclassified (54.237 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.661 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.43% β-sheet: 28.92% Coil/Unstructured: 62.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF02245	Pur_DNA_glyco	3.39
PF08238	Sel1	2.54
PF00072	Response_reg	2.54
PF03992	ABM	2.54
PF00413	Peptidase_M10	1.69
PF12244	DUF3606	0.85
PF12833	HTH_18	0.85
PF09954	DUF2188	0.85
PF01527	HTH_Tnp_1	0.85
PF13202	EF-hand_5	0.85
PF00308	Bac_DnaA	0.85
PF12697	Abhydrolase_6	0.85
PF01699	Na_Ca_ex	0.85
PF13751	DDE_Tnp_1_6	0.85
PF07589	PEP-CTERM	0.85
PF00486	Trans_reg_C	0.85
PF00571	CBS	0.85
PF04392	ABC_sub_bind	0.85
PF03401	TctC	0.85
PF13408	Zn_ribbon_recom	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	3.39
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	1.69
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.85
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.85
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.85
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.85
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.08 %
All Organisms	root	All Organisms	44.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.08 %
cellular organisms	root	All Organisms → cellular organisms	44.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.19 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.69 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.08 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	9.32 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.39 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.85 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.08 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	6.78 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3.39 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.54 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.54 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.85 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.08 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.78 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3.39 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	2.54 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.85 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.85 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.85 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.85 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.85 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.08 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.78 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	3.39 %
Hydrocarboniphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga	2.54 %
Methylomagnum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum	0.85 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.85 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.85 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.85 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.85 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.08 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.78 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	3.39 %
Hydrocarboniphaga effusa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	2.54 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.85 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.85 %
Ramlibacter aquaticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter aquaticus	0.85 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.85 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.85 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886011\|MRS1b_contig_2308897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1584	Open in IMG/M
3300002128\|JGI24036J26619_10132025	Not Available	520	Open in IMG/M
3300004463\|Ga0063356_101385198	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300004463\|Ga0063356_103783961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	652	Open in IMG/M
3300004479\|Ga0062595_100637544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	840	Open in IMG/M
3300004643\|Ga0062591_102050512	Not Available	591	Open in IMG/M
3300005093\|Ga0062594_100085193	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300005093\|Ga0062594_101674855	Not Available	663	Open in IMG/M
3300005330\|Ga0070690_101416698	Not Available	559	Open in IMG/M
3300005331\|Ga0070670_100232110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1606	Open in IMG/M
3300005331\|Ga0070670_100594878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	989	Open in IMG/M
3300005331\|Ga0070670_101025989	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300005333\|Ga0070677_10537978	Not Available	638	Open in IMG/M
3300005337\|Ga0070682_101957123	Not Available	515	Open in IMG/M
3300005338\|Ga0068868_101011630	Not Available	761	Open in IMG/M
3300005347\|Ga0070668_100505865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	1046	Open in IMG/M
3300005354\|Ga0070675_102050802	Not Available	527	Open in IMG/M
3300005355\|Ga0070671_100290580	Not Available	1391	Open in IMG/M
3300005355\|Ga0070671_100748445	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300005355\|Ga0070671_101607990	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005356\|Ga0070674_100016710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	4603	Open in IMG/M
3300005365\|Ga0070688_100727101	Not Available	771	Open in IMG/M
3300005440\|Ga0070705_101953683	Not Available	500	Open in IMG/M
3300005444\|Ga0070694_101790485	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005456\|Ga0070678_100959868	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300005456\|Ga0070678_102405472	Not Available	500	Open in IMG/M
3300005457\|Ga0070662_100684008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	867	Open in IMG/M
3300005543\|Ga0070672_100879515	Not Available	791	Open in IMG/M
3300005545\|Ga0070695_101645341	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005547\|Ga0070693_100240010	Not Available	1196	Open in IMG/M
3300005547\|Ga0070693_100943697	Not Available	649	Open in IMG/M
3300005616\|Ga0068852_101738764	Not Available	646	Open in IMG/M
3300005617\|Ga0068859_101872197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	662	Open in IMG/M
3300005719\|Ga0068861_102045669	Not Available	572	Open in IMG/M
3300005840\|Ga0068870_10377175	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300005840\|Ga0068870_10979598	Not Available	602	Open in IMG/M
3300006237\|Ga0097621_101258388	Not Available	698	Open in IMG/M
3300006358\|Ga0068871_100441744	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300006358\|Ga0068871_101805777	Not Available	581	Open in IMG/M
3300006871\|Ga0075434_101222881	Not Available	763	Open in IMG/M
3300009100\|Ga0075418_10698596	Not Available	1093	Open in IMG/M
3300009100\|Ga0075418_12387906	Not Available	577	Open in IMG/M
3300009177\|Ga0105248_10354478	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300009177\|Ga0105248_13283044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	514	Open in IMG/M
3300009551\|Ga0105238_13073117	Not Available	501	Open in IMG/M
3300009553\|Ga0105249_10694155	Not Available	1077	Open in IMG/M
3300009553\|Ga0105249_13540908	Not Available	503	Open in IMG/M
3300010401\|Ga0134121_12984555	Not Available	520	Open in IMG/M
3300012900\|Ga0157292_10307146	Not Available	572	Open in IMG/M
3300012987\|Ga0164307_11425896	Not Available	584	Open in IMG/M
3300013104\|Ga0157370_11977411	Not Available	523	Open in IMG/M
3300013296\|Ga0157374_12167134	Not Available	583	Open in IMG/M
3300013297\|Ga0157378_10250784	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300013297\|Ga0157378_11694152	Not Available	679	Open in IMG/M
3300013306\|Ga0163162_11338946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	814	Open in IMG/M
3300013306\|Ga0163162_12964196	Not Available	546	Open in IMG/M
3300013308\|Ga0157375_11247386	Not Available	873	Open in IMG/M
3300014325\|Ga0163163_10527889	Not Available	1243	Open in IMG/M
3300014968\|Ga0157379_11544950	Not Available	647	Open in IMG/M
3300014969\|Ga0157376_10796198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	957	Open in IMG/M
3300014969\|Ga0157376_11328327	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300015371\|Ga0132258_12350108	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300015371\|Ga0132258_13184399	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300015372\|Ga0132256_101138074	Not Available	895	Open in IMG/M
3300015372\|Ga0132256_102775517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	588	Open in IMG/M
3300015372\|Ga0132256_103399278	Not Available	535	Open in IMG/M
3300015373\|Ga0132257_101180245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	968	Open in IMG/M
3300015374\|Ga0132255_100060924	All Organisms → cellular organisms → Bacteria	4968	Open in IMG/M
3300015374\|Ga0132255_103575910	Not Available	661	Open in IMG/M
3300017792\|Ga0163161_11940922	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300018060\|Ga0187765_11364169	Not Available	505	Open in IMG/M
3300018076\|Ga0184609_10183177	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300019356\|Ga0173481_10032184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1691	Open in IMG/M
3300024347\|Ga0179591_1099241	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2341	Open in IMG/M
3300025907\|Ga0207645_10607993	All Organisms → cellular organisms → Bacteria → Terrabacteria group	742	Open in IMG/M
3300025908\|Ga0207643_11109037	Not Available	510	Open in IMG/M
3300025923\|Ga0207681_10128774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1868	Open in IMG/M
3300025925\|Ga0207650_10013333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	5690	Open in IMG/M
3300025930\|Ga0207701_10094635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2685	Open in IMG/M
3300025930\|Ga0207701_10641680	All Organisms → cellular organisms → Bacteria → Proteobacteria	902	Open in IMG/M
3300025931\|Ga0207644_10203524	Not Available	1562	Open in IMG/M
3300025931\|Ga0207644_10261848	Not Available	1383	Open in IMG/M
3300025931\|Ga0207644_10914594	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300025932\|Ga0207690_10510309	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300025933\|Ga0207706_10226874	Not Available	1635	Open in IMG/M
3300025933\|Ga0207706_10696410	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300025935\|Ga0207709_10298928	Not Available	1196	Open in IMG/M
3300025935\|Ga0207709_11212688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	622	Open in IMG/M
3300025937\|Ga0207669_10130158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1727	Open in IMG/M
3300025960\|Ga0207651_11300461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	654	Open in IMG/M
3300025961\|Ga0207712_10866740	Not Available	797	Open in IMG/M
3300026023\|Ga0207677_11692680	Not Available	586	Open in IMG/M
3300026075\|Ga0207708_10395035	Not Available	1142	Open in IMG/M
3300026088\|Ga0207641_10298927	Not Available	1520	Open in IMG/M
3300026095\|Ga0207676_10377722	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300026095\|Ga0207676_10799102	Not Available	920	Open in IMG/M
3300026118\|Ga0207675_102344661	Not Available	547	Open in IMG/M
3300027543\|Ga0209999_1085137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300028380\|Ga0268265_11479241	Not Available	682	Open in IMG/M
3300031562\|Ga0310886_10161045	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300031562\|Ga0310886_10777772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	601	Open in IMG/M
3300031740\|Ga0307468_100658602	Not Available	867	Open in IMG/M
3300031747\|Ga0318502_10593865	Not Available	666	Open in IMG/M
3300031799\|Ga0318565_10428680	Not Available	640	Open in IMG/M
3300031908\|Ga0310900_11179997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter aquaticus	636	Open in IMG/M
3300032009\|Ga0318563_10127204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1359	Open in IMG/M
3300032013\|Ga0310906_11186409	Not Available	555	Open in IMG/M
3300032035\|Ga0310911_10365491	Not Available	834	Open in IMG/M
3300032180\|Ga0307471_103327819	Not Available	569	Open in IMG/M
3300032211\|Ga0310896_10273806	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300034150\|Ga0364933_003304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	66.95%
Environmental	Environmental	33.05%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	66.95%
Terrestrial	Environmental → Terrestrial	32.20%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.83%
Soil	Environmental → Terrestrial → Soil	31.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.73%
Roots	Host-Associated → Plants → Roots	3.39%
Sediment	Environmental → Aquatic → Sediment	0.85%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	23.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.10%
Loam	Environmental → Terrestrial → Soil → Loam	9.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.39%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	23.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.39%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	11.02%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.08%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.54%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS1b_0724.00001290	2162886011	Miscanthus Rhizosphere	MPRLELFPFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPEIRDVDPNERYFVEKPTSRCSAEQER
JGI24036J26619_101320252	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELFPFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPEIRDVDPNERYFVEKPTSRCS
Ga0063356_1013851981	3300004463	Arabidopsis Thaliana Rhizosphere	MPRLELFPFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPEIRDVDPNERYFVEKPTSRCSAEQER*
Ga0063356_1037839612	3300004463	Arabidopsis Thaliana Rhizosphere	MREAHRLRMPRLEYFPFRYRDAVTGKWVRARYRAERHVIAERFKHTEWEITGPPEIRDTDPSA*
Ga0062595_1006375441	3300004479	Soil	VDRLELFPFRYRDPRTGKWVRARYRAERHEIAARYVEYEIIGPAEIREIDPDERRFSPHV
Ga0062591_1020505122	3300004643	Soil	RAPMPRLELFPFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPEIRDVDPNERYFVEKPTSRCSAEQER*
Ga0062594_1000851932	3300005093	Soil	MPRLELFPFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPETRDVDPNERYFVEKPTSRCSAEQER*
Ga0062594_1016748552	3300005093	Soil	MAPRLELFASHYRDPRTGKWNRARYVATREEIAARYTEWEIIGPAEIRDVDP
Ga0070690_1014166981	3300005330	Switchgrass Rhizosphere	IDAMPILELFPFRYWDAVRGRWIKARYVAERHEIEARHALGEWEIVGPPEIRNVSLDPSANS*
Ga0070670_1002321103	3300005331	Switchgrass Rhizosphere	MAPRLELFAFRYCGPRTGKWVRARYRADRDQIAARYAEWKIIGPAEILDVDPRRALR*
Ga0070670_1005948781	3300005331	Switchgrass Rhizosphere	MPRLELFPFRYRDRVTGKWVKARYVAERHEIAARYTEWEIIGPPEIRDVDPHARY
Ga0070670_1010259891	3300005331	Switchgrass Rhizosphere	MPRLELFPFRYRNTVTGKWAKARYVAERHEIAARYAEWEIIGPPEIRDVDPNARYFTP
Ga0070677_105379783	3300005333	Miscanthus Rhizosphere	MPRLELFPFRYRVIYGQMVKARYRAERHEIAARYNEWEIIGPPEIRDVDPNAR
Ga0070682_1019571231	3300005337	Corn Rhizosphere	MPRLQLFPFRYRDDVTGKWVKARYVAEPQEIAARYSEWEIIGPPEIRDVDPHARYFT
Ga0068868_1010116302	3300005338	Miscanthus Rhizosphere	MPRLALFPFRYRDRVTGKWVKARHVAERHDIAARYAEWEIIGPPEIRDVDPYARYFTP*
Ga0070668_1005058651	3300005347	Switchgrass Rhizosphere	MSRIELFPFRFRDRFTGKWVRARYRAERDEIARRYPEYEITGPPEIREGNADARRFT
Ga0070675_1020508022	3300005354	Miscanthus Rhizosphere	LELFPFRYWDAVRGRWIKARYVAERHEIELAMLPGEWEIVGPPEIRNVSLDPSANS*
Ga0070671_1002905801	3300005355	Switchgrass Rhizosphere	MPRLYLYPFRYRDPLTGKWVKARYVAERHEINARHAEWETIGPPEVRNVNPDARYFTPRKVVPHADL
Ga0070671_1007484452	3300005355	Switchgrass Rhizosphere	MASRIELYPFRYRDPRTGKWICARYVVPREEIAERHAEWEIIGPAEIRDVD
Ga0070671_1016079901	3300005355	Switchgrass Rhizosphere	VPRLELFPFRYRDRVTGKWVKARYLAERYEIVARYAEWEIIGPPEIRDVDPNARYFSPWKVVPHADLMRME
Ga0070674_1000167106	3300005356	Miscanthus Rhizosphere	MPRLELFPFRYRESFTGKWVKARYRAERHEIAARYNEWEIIGPPEIRDVDPNARYSHHGRACRKRN*
Ga0070688_1007271011	3300005365	Switchgrass Rhizosphere	MPRLEQFPFRYRDRVTGKWVRARYVAERHEIAARYAEWEIIGPPEICDVDPNARYFTPWK
Ga0070714_1020131481	3300005435	Agricultural Soil	MVRGIVGDMPRLFLYPPQRSPVTGKWVKARYVAERHEIAARHAAGDWEITGPPEIRDVDDGARYFHPYRPIEHAELMRLQEP
Ga0070705_1019536832	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELYPFRYRHPLTGKWIRARYKAERHEIAERYAEYEITGPPEIREVDPKAR
Ga0070694_1017904852	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIELFPFRFRDRITGKWVRARYRAERDEIARRYPEYEITGPPEIREGNADARRFT
Ga0070678_1009598681	3300005456	Miscanthus Rhizosphere	MPRLELFPFRYREPFTGKWAKARYRAERHEIAARYQEWEITGPPEIRDVDPNARYFTPWKVVPHAE
Ga0070678_1024054721	3300005456	Miscanthus Rhizosphere	MPRLELFPFRYRDRITGKWVRARYVAEPHEIAARYEVWGLIGPPEIRDVDPNA
Ga0070662_1006840083	3300005457	Corn Rhizosphere	MSRIELFPFRFRDRITGKWVRARYRAERDEIARRYPEYEITGPPETREGNADARRF
Ga0070672_1005067712	3300005543	Miscanthus Rhizosphere	MPRVELFAFHYRDPRTGRWIRARYRAERHEIASRHAEFEIIGAPEIRDVDPDERHFTPHERGGP
Ga0070672_1008795151	3300005543	Miscanthus Rhizosphere	MPRLELFPFRYRESFMGKWVKARYRSERHEIAARYKQWEITAPPEIREVDPKARYFTPWKVLPH
Ga0070686_1003182403	3300005544	Switchgrass Rhizosphere	MPKLELYPFRYRDRVTRRWVRARHAATREEIAKGNDEWEIIGPPEIREIDLRARYFTPF
Ga0070695_1016453411	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAPPLELCAFRYRDPRTGKWVRARYRAEQEEIAARYAEWEIMGLAEIRDVDPEARAFTPA
Ga0070693_1002400102	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MPRIELFTFHYRDPRTGRWIRARYRAERNEIASRYAEFELVGTPEIREVDPDDR
Ga0070693_1009436971	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELFPFRYRDRLTGKWVEARYVAERHEIAARYAEWEIIGSPEIRDVDPNERYFVEKPTSRCSAEQER*
Ga0068852_1017387642	3300005616	Corn Rhizosphere	MPRLELFRFRYRDRVTGKWVKARYVAERHEIAARYTEWEVIGPPEIRDVDSHARYFTPWKVVPHAELMRM*
Ga0068859_1018721973	3300005617	Switchgrass Rhizosphere	MSRIELFPFRFRDRITGKWVRARYRAERDEIARRYPEYEITGPPEIREGNADARRFTPHS
Ga0068861_1020456692	3300005719	Switchgrass Rhizosphere	MPRLELFPFRYRESFTGKWVKARYRAERHEIAARYNEWEIIGPPEIRDVDPNARYSHHGRSCRKRN*
Ga0068870_103771752	3300005840	Miscanthus Rhizosphere	MAPRLELFAFRYCDPRTGKWVRARYRADRDQIAARYAEWKIIGPAEILDVDPRRALR*
Ga0068870_109795982	3300005840	Miscanthus Rhizosphere	MAPRYELYAFRYRDPRTGKWGRARYVATREEITKRYADVETIGAEVRDVDPETR
Ga0097621_1012583882	3300006237	Miscanthus Rhizosphere	MPRLELFPFRYRDRVTGKWVRARYVAERHEIAARYPEWEIIGPPAIRDVDPDARYLRHGRSCRTQS*
Ga0068871_1004417442	3300006358	Miscanthus Rhizosphere	MAPRIELYPFRYRDPRTGKWICARYVVTREEIAERHAEWEIIGPAEIRDVDPE
Ga0068871_1018057771	3300006358	Miscanthus Rhizosphere	VAPRLELFAFRYRDPRTGKWTRARYVATREEIAARYAEWEITGPAEIRDVDPEARAFTP
Ga0075434_1012228812	3300006871	Populus Rhizosphere	MVPRLELFPFRYRDPRTGKWIRARYVAELHEIKARHAEFEITGPAEIRNVSPDARYFSPS
Ga0075418_106985961	3300009100	Populus Rhizosphere	MAPRLELFAFRYCGPRTGKWVRARYRADRDQIAARYAEWKIIGPAEIRDVDPRRALR*
Ga0075418_123879061	3300009100	Populus Rhizosphere	MAPRIELFAFRYRDRLTGKWIPARYVATREEIAKRHAEWEIIGAAAIRDVDPAARHF
Ga0105248_103544782	3300009177	Switchgrass Rhizosphere	VPRLELFPFRYRDRVTGKWVKARYLAERYEIVARYAEWEIIGPPEIRDVDPNARYFSP*
Ga0105248_132830441	3300009177	Switchgrass Rhizosphere	MARLELFPFRYRDHLSGKWVKARYVAERQEIVARYADWEIIGPPEIRDVDPNARYF
Ga0105238_130731171	3300009551	Corn Rhizosphere	MGRFELYVFRFRDPVTGKWVRARYRAAHDEIVQRYAEYEILGSAEVRDGDPDA
Ga0105249_106941551	3300009553	Switchgrass Rhizosphere	MAPRLELFAFRYCDPRTGKWVRARYRADRDQIAARYAGWKIIGPAEIRDVDPRRALR*
Ga0105249_135409081	3300009553	Switchgrass Rhizosphere	VRDLRPADMPRLELFPFRYRNPVTGKWVRARYLASREEIAKDNAEWELIEPPEIRDVD
Ga0134121_129845551	3300010401	Terrestrial Soil	MSPRRELFPFRYRDPQTGKWVRARYLAELHEIKAHHAEFEIIGPPEIRGVDPDARYFAPDFNAM
Ga0150985_1011453141	3300012212	Avena Fatua Rhizosphere	MAPRLELFAFRYRDPRTGDWVRARVRADREELAARYSQWEIIGPAQIRDVGPDARYFTPQLFAAIQGSAG*
Ga0157292_103071463	3300012900	Soil	MGRVELFPFRFRDPVTGKWTRARYKAERHEIAERYAEYEITGPPEIREVDPKA
Ga0164307_114258962	3300012987	Soil	VTGRWVKTRYVAERHEIAARYPEIDIVGPAEMRDVDPHARYFAPWKVAPHAELMQMQE
Ga0157370_119774112	3300013104	Corn Rhizosphere	VTKRLYLYPFRYRSPLTGKWVKARYVAERHEIKAQHAEWEIIGPPEIRDVDPNARHFHPSRVIAHAELRRLQV*
Ga0157374_121671343	3300013296	Miscanthus Rhizosphere	VRDLRPADMPRLELFPFRYRNPVTGKWVRARYLASREEIAKGNAEWELIEPPVIRDVDWNAPYFTPFRD
Ga0157378_102507843	3300013297	Miscanthus Rhizosphere	MPRLELFPFRYRESFTGKWVKARYRAERHEIAARYKEWEITGPPEIGDVDPDARYFTPWKVVPHAELRRM
Ga0157378_116941521	3300013297	Miscanthus Rhizosphere	MPRLELFPFRYRDPATGKWVRARYRAERDEIARRHAEHEITGPAEIRDVDPGARRFTPHFKPKTTSD
Ga0163162_113389461	3300013306	Switchgrass Rhizosphere	MASRLELFAFRYRDPRTGKWVRARYVAERHEIAARYAEWEIIGPPEIRDVNPDARYF
Ga0163162_129641961	3300013306	Switchgrass Rhizosphere	MPRLELFPLRYRDPRTGKWVRARYVATRENIAERHAEWEITGPAEIRDVDPE
Ga0157375_112473861	3300013308	Miscanthus Rhizosphere	HRAAMPRLELFPFRYRNTVTGKWVRARYVATREEIAKRNAEWEIIGPAEIRDVDPDAR*
Ga0163163_105278892	3300014325	Switchgrass Rhizosphere	MPRLELFPFRYRDRVTGKWVRARYVAERHEIAARYPEWEIIRPPAIRDVDPDARYFTPWKVVPHAE
Ga0157379_115449502	3300014968	Switchgrass Rhizosphere	MVPRIELFPFRYRHPRTGKWIRARYVATREEIAERYAEWEITAPAEIRDVDPEARYFTPHLR*
Ga0157376_107961982	3300014969	Miscanthus Rhizosphere	MAPRLELSAFRYRDPRTGKRVRARHGADRDEIAARYSEWEILGEPEIRDVDPDARSTD
Ga0157376_113283272	3300014969	Miscanthus Rhizosphere	MPRLELFPFRYRNTVTGKWAKARYVAERHEIAARYAEWEIIGPPGIRDVDPLRAISLHGKSWRTPT*
Ga0132258_123501082	3300015371	Arabidopsis Rhizosphere	MPRLELFPFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPEIRDADPNERYFVEKPTSRCSAEQER*
Ga0132258_131843993	3300015371	Arabidopsis Rhizosphere	MRRLELFPFRYRDRVTGKWVKARYVAERHEIAERYTEWEIIGPPEIRDVDIHARSF
Ga0132256_1011380742	3300015372	Arabidopsis Rhizosphere	RMPRLELFRFRYRDRVTGKWVKARYVAERHEIAARYTEWEVIGPPEIRDVDPHARYFTPWKVVPHAELMRM*
Ga0132256_1027755172	3300015372	Arabidopsis Rhizosphere	VDRLELFPFRYRDPRTGKWVRARYRAERHEIAARYVEYEIIGPAEIREIDPDERRFSPHVAE
Ga0132256_1033992782	3300015372	Arabidopsis Rhizosphere	MREAHRLHVPRLECFPFRFRDRVTGRWVRARYRAERHVIAERYKHTEWEITGPPEIRDVDPHARYFS
Ga0132257_1011802452	3300015373	Arabidopsis Rhizosphere	VDRLELFPFRYRDPRTGKWIRARYVAELREIKQRYLEWEIIGTPEVREVGSDARHFTPHPRETPLGNLG
Ga0132255_1000609241	3300015374	Arabidopsis Rhizosphere	MPRLELFPFCNRNHLTGRWVRARYVAEKYEIAARHKEWEIVGPAEVRDVDPHARYFTPWKVV
Ga0132255_1035759102	3300015374	Arabidopsis Rhizosphere	MPRLELFPFRYRDRITGKWVRARYVAEPHEIAARYEAWELIGPPEIRDVDPNAR
Ga0163161_119409222	3300017792	Switchgrass Rhizosphere	MPRLELFPFRYREPFTGKWAKARYRAERHEIAARYQEWEITGPPEIRDVDPNARYFTPW
Ga0187765_113641691	3300018060	Tropical Peatland	MGPVALFPFRFRDPVTGRWVRARYRAERHEMERRYVEYEIVGPPEIRDGDPDAP
Ga0184609_101831771	3300018076	Groundwater Sediment	MAPRLELFEFRYRDPRTRKWIRARHVATREEIAQRHAAWEIVGLAEIRDVDPEARYFTL
Ga0173481_100321842	3300019356	Soil	MPRLELFPFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPETRDVDPNERYFVEKPTSRCSAEQER
Ga0179591_10992415	3300024347	Vadose Zone Soil	MAPRLELFPFRFRDPRTGKWIRARYRAERREIAARYAEFEITGPAQVRDVDPEARAFSPHGHTASPKE
Ga0207645_106079932	3300025907	Miscanthus Rhizosphere	VHRLELFPFRYRDPRTGKWVRARYRAERQEIAARYAEYEIVGQAEIREIDPDERRFCPHSAEPAPR
Ga0207643_111090371	3300025908	Miscanthus Rhizosphere	MPRLEQFPFRYRDRVTGKWVKARYVAERHEIAARYTEWEIIGPPEIRDVDPH
Ga0207681_101287742	3300025923	Switchgrass Rhizosphere	MPRLELFPFRYRDRLTGKWVKARYVAERHEIARVTPSGEIIGSPEIRDVDPNERYFVEKPTSRCSAEQER
Ga0207650_100133335	3300025925	Switchgrass Rhizosphere	MPRLELFPFRYRDRVTGKWVKARYVAERHEIAARYTEWEIIGPPEIRDVDPHARYCTPWKIVPHAE
Ga0207701_100946354	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELFPFRYRESFTGKWVKARYRAERHEIAARYNEWEIIGPPEIRDVDPNARYSHHGRACRKRN
Ga0207701_106416803	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELFRFRYRDRVTGKWVKARYVAERHEIAARYTEWEVIGPPEIRDVDSHARYFTPWKVVPHAELMRM
Ga0207644_102035243	3300025931	Switchgrass Rhizosphere	MPRLELFRFRYRDRVTGKWVKARYVAERHEIAARYTEWEVIGPPEIRDVDPHARYFTPWKVVPHAELMRM
Ga0207644_102618484	3300025931	Switchgrass Rhizosphere	MPRLYLYPFRYRDPLTGKWVKARYVAERHEINARHAEWETIGPPEVRNVNPDARYFTPRKSCRM
Ga0207644_109145942	3300025931	Switchgrass Rhizosphere	VPRLELFPFRYRDRVTGKWVKARYLAERYEIVARYAEWEIIGPPEIRDVDPNARYFSP
Ga0207690_105103091	3300025932	Corn Rhizosphere	TGKWVKARYVAERHEIAARYAEWEIIGSPEIRDVDPNERYFVEKPTSRCSAEQER
Ga0207706_102268741	3300025933	Corn Rhizosphere	VHRLELFPFRYRDPRTGKWVRARYRAERQEIAARYAEYEIVGQAEIREIDPDE
Ga0207706_106964103	3300025933	Corn Rhizosphere	MSRIELFPFRFRDRITGKWVRARYRAERDEIARRYPEYEITGPPETREGNADARRFT
Ga0207709_102989282	3300025935	Miscanthus Rhizosphere	MAPRLELYAFRYRDPRTGKWVRARYRAELHELKHRYVEFEITGAPELREVSSNTRYFSPHPRETPL
Ga0207709_112126882	3300025935	Miscanthus Rhizosphere	MSRIELFPFRFRDRITGKWVRARYRAERDEIARRYPEYEITGPPEIREGNADARRFTPHSSQ
Ga0207669_101301583	3300025937	Miscanthus Rhizosphere	MPRLELFPFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPEIRDVDPNERYF
Ga0207691_103248431	3300025940	Miscanthus Rhizosphere	MPRVELFAFHYRDPRTGRWIRARYRAERHEIASRHAEFEIIGAPEIRDVDPDERHFTPHERGGPL
Ga0207651_113004611	3300025960	Switchgrass Rhizosphere	MPRLELFPFRYRNTVTGKWVRARYVATREEIAKRNAEWEIIGPAEIRDVDPDAR
Ga0207712_108667401	3300025961	Switchgrass Rhizosphere	MAPRLELFAFRYCDPRTGKWVRARYRADRDQIAARYAGWKIIGPAEIRDVDPRRALR
Ga0207677_116926801	3300026023	Miscanthus Rhizosphere	MPRLELFPFRYRDRLTGKWVKARYVAERHEIAARHSEWEIVGPPEIRDVDPNARYFTPWKVVP
Ga0207708_103950351	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELFPFRYRESFTGKWVKARYRAERHEIAARYNEWEIIGPPEIRDVDPNAR
Ga0207641_102989272	3300026088	Switchgrass Rhizosphere	MPRLELFRFRYRDRVTGKWLKARYVAERHEIAARYTEWEVIGPPEIRDVDPHARYFTPWKVVPHAELMRM
Ga0207676_103777224	3300026095	Switchgrass Rhizosphere	MSRIELFPFRFRDRITGKWVRARYRAERDEIARRYPEYEITGPPEIREGNADA
Ga0207676_107991021	3300026095	Switchgrass Rhizosphere	MAPRYELYAFRYRDPRTGKWGRARYVATREEITKRYADVETIGAEVRD
Ga0207675_1023446611	3300026118	Switchgrass Rhizosphere	MPRLKLFPFRYRNPITGKWVRARDVATREEIAKRNAAWEIIGAPEIRDVDTNARYFTPFRVTPHA
Ga0209999_10851371	3300027543	Arabidopsis Thaliana Rhizosphere	MRGANRLHMPRLECFPFRFRDPVKGKWLRARYPTERHVITERYKDTEWEITGPAEIRGVIRTRASSTLGA
Ga0268265_114792413	3300028380	Switchgrass Rhizosphere	ASPRSPHRAPMPRLELFPFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPEIRDVDPNERYFVEKPTSRCSAEQER
Ga0310886_101610452	3300031562	Soil	MPRLELFPFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPEIRDVDPNERYFTPWKALPHAELMRMQELRHGSQR
Ga0310886_107777721	3300031562	Soil	VHRLELFPFRYRDPRTGKWVRARYRAERQEIAARYAEYEIVGQAEIREIDPDERRFCPHSAEPA
Ga0307468_1006586022	3300031740	Hardwood Forest Soil	MVPRLELFPFRFRDPRTRKWIRARYVAELHEIAARHAEFEIIGSAEIRNVNPDARYFKPHIGAAP
Ga0318502_105938652	3300031747	Soil	MAPRLELFPFRFRDPRTGKWVRVRYVAERHEIAARYAEWKITGPAETRDVDPDGQYFAPH
Ga0318565_104286802	3300031799	Soil	MAPRLELFPFRFRDPRTGKWVRARYVAERHEIAARYAEWKITGPAETRDVDPDGHYFAPHLRE
Ga0310900_111799972	3300031908	Soil	MPRLELFPFRYRDRVTGKWVKARYVAERHEIAARYTEWEIIGPPEIRDVDPHARYFTPWK
Ga0308175_1007614761	3300031938	Soil	VPRLFLYHFRYRTKVTGKWVRARYVAERDEIAARHAEWEIIGPPEIRDVDPNARHFHPYRVLEHAELMRLQEP
Ga0318563_101272043	3300032009	Soil	MAPRLELFPFRFRDPRTGKWVRARYVAERHEIAARYAEWKITGPAETRDVDPDGHYFAPH
Ga0310906_111864091	3300032013	Soil	MPRLELFPFRYRDRVSGKWLKARYVAERHEIDARYAEWEIIGPPEIRDVDPDARYFTPWKVVPH
Ga0310911_103654911	3300032035	Soil	MAPRLELFPFRFRDPRTGKWVRVRYVAERHEIAARYAEWKITGPAETRDVDPDGQ
Ga0307471_1033278192	3300032180	Hardwood Forest Soil	MTPRLELYPFRYRDPRTGKWIRARYVAELHEIAARYAEWEITGPAEIRGVSTEARYFT
Ga0310896_102738064	3300032211	Soil	PFRYRDRLTGKWVKARYVAERHEIAARYAEWEIIGSPEIRDVDPNERYFVEKPTSRCSAEQER
Ga0306920_1004091261	3300032261	Soil	MAPRLELFPFRFRDPRTGKWVRARYVAERHEIAARYAEWKITGPAETRDVDPDGHYFAPHLREGASGVGNLGP
Ga0364933_003304_427_618	3300034150	Sediment	MRLELFPFRYRDPLTGKWVRASYLAERHEIAARYAEWEIIGPPEFRNVDPEARAFTPHRRSSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076200

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences